Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCC3 8714 hgsc.bcm.edu;ucsc.edu 37 17 48761334 48761334 + Missense_Mutation SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed ADAMTS18 170692 hgsc.bcm.edu;ucsc.edu 37 16 77401389 77401389 + Missense_Mutation SNP A A T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A A T A A Unknown Valid Somatic Phase_I WXS 454 SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed ADAMTS20 80070 hgsc.bcm.edu;ucsc.edu 37 12 43819454 43819454 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed ADCY2 108 hgsc.bcm.edu;ucsc.edu 37 5 7706858 7706858 + Nonsense_Mutation SNP A A T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed AKAP1 8165 hgsc.bcm.edu 37 17 55184151 55184151 + Silent SNP T T C novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed AMY1B 277 hgsc.bcm.edu 37 1 104238207 104238207 + Missense_Mutation SNP A A G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed BBX 56987 hgsc.bcm.edu;ucsc.edu 37 3 107429337 107429337 + Missense_Mutation SNP T T G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed BFSP1 631 hgsc.bcm.edu;ucsc.edu 37 20 17475631 17475631 + Missense_Mutation SNP T T A novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed C15orf27 123591 hgsc.bcm.edu;ucsc.edu 37 15 76449034 76449034 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed C22orf30 0 hgsc.bcm.edu;ucsc.edu 37 22 32113207 32113207 + Silent SNP C C G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed C6orf132 647024 hgsc.bcm.edu 37 6 42072710 42072715 + In_Frame_Del DEL CTCCTC CTCCTC - rs150599390 by1000genomes TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 CTCCTC CTCCTC . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed C7orf11 0 hgsc.bcm.edu;ucsc.edu 37 7 40172756 40172756 + Missense_Mutation SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed CPAMD8 27151 hgsc.bcm.edu 37 19 17104239 17104239 + Missense_Mutation SNP T T C rs151335087 by1000genomes TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed DICER1 23405 hgsc.bcm.edu;ucsc.edu 37 14 95582928 95582928 + Silent SNP A A G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed EXOSC8 11340 hgsc.bcm.edu;ucsc.edu 37 13 37580087 37580087 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed FAF1 11124 hgsc.bcm.edu;ucsc.edu 37 1 50941223 50941223 + Silent SNP G G A novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed FAR1 84188 hgsc.bcm.edu;ucsc.edu 37 11 13734516 13734516 + Silent SNP A A T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed FBXO9 26268 hgsc.bcm.edu 37 6 52957228 52957228 + Missense_Mutation SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed FERMT3 83706 hgsc.bcm.edu;ucsc.edu 37 11 63990880 63990880 + Silent SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed IARS 3376 hgsc.bcm.edu;ucsc.edu 37 9 95050488 95050488 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed IRX6 79190 hgsc.bcm.edu 37 16 55360271 55360271 + Silent SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed KIAA1797 0 hgsc.bcm.edu;ucsc.edu 37 9 20758088 20758088 + Splice_Site SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed KRT75 9119 hgsc.bcm.edu 37 12 52824455 52824455 + Missense_Mutation SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed LAMP2 3920 hgsc.bcm.edu;ucsc.edu 37 X 119581775 119581775 + Missense_Mutation SNP C C A novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed LONP2 83752 hgsc.bcm.edu;ucsc.edu 37 16 48385510 48385510 + Missense_Mutation SNP A A G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed MAP4K3 8491 hgsc.bcm.edu;ucsc.edu 37 2 39552914 39552914 + Missense_Mutation SNP G G A rs182117796 by1000genomes TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed MTOR 2475 hgsc.bcm.edu;ucsc.edu 37 1 11189847 11189847 + Missense_Mutation SNP A A T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A A T A A Unknown Valid Somatic Phase_I WXS PGM SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed NBPF4 148545 hgsc.bcm.edu 37 1 108786261 108786261 + Silent SNP T T C rs6697615 bycluster TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed NOMO2 283820 hgsc.bcm.edu 37 16 18522873 18522873 + Silent SNP C C T rs10085 bycluster TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed P2RY8 286530 hgsc.bcm.edu 37 X 1585211 1585211 + Missense_Mutation SNP A A C novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed PARP15 165631 hgsc.bcm.edu;ucsc.edu 37 3 122324838 122324838 + Missense_Mutation SNP C C A novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed PDE4C 5143 hgsc.bcm.edu 37 19 18327665 18327665 + Silent SNP C C A novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed PKN2 5586 hgsc.bcm.edu;ucsc.edu 37 1 89298945 89298945 + Silent SNP T T C novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed PTGFR 5737 hgsc.bcm.edu;ucsc.edu 37 1 78958563 78958563 + Missense_Mutation SNP C C G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed RGNEF 0 hgsc.bcm.edu;ucsc.edu 37 5 73144821 73144821 + Silent SNP T T C novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed RIOK1 83732 hgsc.bcm.edu;ucsc.edu 37 6 7410657 7410657 + Silent SNP G G A novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed SETBP1 26040 hgsc.bcm.edu;ucsc.edu 37 18 42281648 42281648 + Missense_Mutation SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed SLC25A44 9673 hgsc.bcm.edu;ucsc.edu 37 1 156169866 156169866 + Silent SNP G G T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed SUPV3L1 6832 hgsc.bcm.edu;ucsc.edu 37 10 70960220 70960220 + Missense_Mutation SNP A A C novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed SYNE2 23224 hgsc.bcm.edu;ucsc.edu 37 14 64493398 64493399 + Frame_Shift_Ins INS - - G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed TGS1 96764 hgsc.bcm.edu 37 8 56717519 56717519 + Silent SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed TNN 63923 hgsc.bcm.edu 37 1 175053032 175053032 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed TOPBP1 11073 hgsc.bcm.edu;ucsc.edu 37 3 133347540 133347540 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed TRIM29 23650 hgsc.bcm.edu 37 11 119996484 119996484 + Silent SNP C C G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed UPF3B 65109 hgsc.bcm.edu;ucsc.edu 37 X 118974623 118974623 + Missense_Mutation SNP C C T novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed VPS26B 112936 hgsc.bcm.edu 37 11 134095128 134095128 + Missense_Mutation SNP T T G novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed WWP1 11059 hgsc.bcm.edu;ucsc.edu 37 8 87424056 87424056 + Silent SNP T T C novel TCGA-B0-4846-01A-01D-1361-10 TCGA-B0-4846-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 808ee2fa-13a3-49c1-9814-622ece3fad6a 0f9057ba-aca4-4d39-b624-9a8e1464beed