Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA4 24 hgsc.bcm.edu;ucsc.edu 37 1 94568673 94568673 + Silent SNP G G T rs148091207 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c ABCC3 8714 hgsc.bcm.edu;ucsc.edu 37 17 48765029 48765029 + Missense_Mutation SNP G G C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c ANK2 287 hgsc.bcm.edu 37 4 114179233 114179233 + Missense_Mutation SNP T T C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T T C T T Unknown Valid Somatic Phase_I WXS 454 SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c ANKRD17 26057 hgsc.bcm.edu;ucsc.edu 37 4 74021354 74021354 + Missense_Mutation SNP A A T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c ARHGAP42 143872 hgsc.bcm.edu;ucsc.edu 37 11 100641130 100641130 + Missense_Mutation SNP T T G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c C20orf26 26074 hgsc.bcm.edu 37 20 20140084 20140084 + Missense_Mutation SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c CCDC68 80323 hgsc.bcm.edu;ucsc.edu 37 18 52610015 52610015 + Missense_Mutation SNP G G T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c CDH8 1006 hgsc.bcm.edu;ucsc.edu 37 16 61687743 61687743 + Missense_Mutation SNP T T G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c CHD5 26038 hgsc.bcm.edu 37 1 6171886 6171886 + Missense_Mutation SNP T T C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c DBX2 440097 hgsc.bcm.edu;ucsc.edu 37 12 45429899 45429899 + Splice_Site SNP T T G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c DNAH5 1767 hgsc.bcm.edu;ucsc.edu 37 5 13830726 13830726 + Missense_Mutation SNP C C A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c DPYSL4 10570 hgsc.bcm.edu 37 10 134013906 134013906 + Silent SNP C C T rs56326856 bycluster;byfrequency;by1000genomes TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c ESYT1 23344 hgsc.bcm.edu;ucsc.edu 37 12 56531335 56531335 + Missense_Mutation SNP G G A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c FAM160A2 84067 hgsc.bcm.edu 37 11 6239139 6239139 + Silent SNP A A G rs11040809 bycluster;byfrequency;by1000genomes TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c FBXO4 26272 hgsc.bcm.edu;ucsc.edu 37 5 41929897 41929897 + Missense_Mutation SNP A A G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c FHOD3 80206 hgsc.bcm.edu 37 18 34191947 34191947 + Missense_Mutation SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c HUWE1 10075 hgsc.bcm.edu 37 X 53579772 53579772 + Silent SNP T T A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c IGFBP3 3486 hgsc.bcm.edu 37 7 45957039 45957039 + Splice_Site SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c KIAA1467 57613 hgsc.bcm.edu;ucsc.edu 37 12 13208556 13208556 + Missense_Mutation SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c KIAA1467 57613 hgsc.bcm.edu;ucsc.edu 37 12 13224254 13224254 + Missense_Mutation SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c KIAA2026 158358 hgsc.bcm.edu;ucsc.edu 37 9 5968196 5968196 + Nonsense_Mutation SNP T T A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c KLHL5 51088 hgsc.bcm.edu;ucsc.edu 37 4 39116919 39116919 + Missense_Mutation SNP C C T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c MASP1 5648 hgsc.bcm.edu;ucsc.edu 37 3 186937985 186937985 + Silent SNP G G A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c MMP10 4319 hgsc.bcm.edu;ucsc.edu 37 11 102650297 102650297 + Silent SNP G G A rs140654514 bycluster;byfrequency;by1000genomes TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c MYH11 4629 hgsc.bcm.edu;ucsc.edu 37 16 15932004 15932004 + Missense_Mutation SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c NFE2L2 4780 hgsc.bcm.edu;ucsc.edu 37 2 178098945 178098945 + Missense_Mutation SNP G G C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G G C G G Unknown Valid Somatic Phase_I WXS PGM SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c NRBP1 29959 hgsc.bcm.edu;ucsc.edu 37 2 27663325 27663325 + Silent SNP C C T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c OGT 8473 hgsc.bcm.edu 37 X 70775921 70775921 + Missense_Mutation SNP C C A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C C A C C Unknown Valid Somatic Phase_I WXS 454 SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c PLCH2 9651 hgsc.bcm.edu 37 1 2421272 2421272 + Missense_Mutation SNP A A T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c PNLIPRP2 5408 hgsc.bcm.edu 37 10 118383462 118383463 + Frame_Shift_Ins INS - - A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c POLH 5429 hgsc.bcm.edu;ucsc.edu 37 6 43550779 43550779 + Missense_Mutation SNP G G T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c PRKCD 5580 hgsc.bcm.edu 37 3 53219628 53219628 + Silent SNP C C T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c PRPF8 10594 hgsc.bcm.edu 37 17 1584776 1584776 + Missense_Mutation SNP G G C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c PRX 57716 hgsc.bcm.edu 37 19 40902613 40902613 + Missense_Mutation SNP G G A rs150582069 TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c PUF60 22827 hgsc.bcm.edu;ucsc.edu 37 8 144898831 144898831 + Silent SNP G G C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c RGS12 6002 hgsc.bcm.edu;ucsc.edu 37 4 3432133 3432133 + Splice_Site SNP G G T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c RTN3 10313 hgsc.bcm.edu;ucsc.edu 37 11 63486754 63486754 + Missense_Mutation SNP A A C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c SORL1 6653 hgsc.bcm.edu 37 11 121483478 121483478 + Missense_Mutation SNP T T C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T T C T T Unknown Valid Somatic Phase_I WXS 454 SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c SPEM1 374768 hgsc.bcm.edu;ucsc.edu 37 17 7324560 7324560 + Missense_Mutation SNP C C T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c SYT17 51760 hgsc.bcm.edu 37 16 19195087 19195087 + Missense_Mutation SNP T T G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c TIMELESS 8914 hgsc.bcm.edu;ucsc.edu 37 12 56814823 56814823 + Silent SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c TIMM23 100287932 hgsc.bcm.edu;ucsc.edu 37 10 51592504 51592504 + Missense_Mutation SNP T T C novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c TNS4 84951 hgsc.bcm.edu 37 17 38652467 38652467 + Missense_Mutation SNP G G T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c TRIM22 10346 hgsc.bcm.edu;ucsc.edu 37 11 5717667 5717667 + Nonsense_Mutation SNP C C T novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c USP17L2 377630 hgsc.bcm.edu 37 8 11995987 11995987 + Silent SNP G A A rs3988861 bycluster TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c ZNF292 23036 hgsc.bcm.edu 37 6 87966157 87966157 + Missense_Mutation SNP T T A novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c SETD2 29072 ucsc.edu 37 3 47059132 47059132 + Missense_Mutation SNP C C G novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 C C C G C C Unknown Valid Somatic . WXS PGM . . SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c KDM5C 8242 ucsc.edu 37 X 53222653 53222656 + Frame_Shift_Del DEL GGCT GGCT - novel TCGA-B0-4837-01A-01D-1373-10 TCGA-B0-4837-11A-01D-1373-10 GGCT GGCT GGCT - GGCT GGCT Unknown Valid Somatic . WXS PGM . . SOLID 078b4a67-3a8a-40f4-928c-768fa3c91450 05cbbbd4-67af-4685-b4d8-80ebe715333c