Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCB11 8647 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 169869900 169869900 + Missense_Mutation SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ADAMTSL2 9719 broad.mit.edu;ucsc.edu 37 9 136412244 136412244 + Missense_Mutation SNP T C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ADCY3 109 broad.mit.edu;ucsc.edu 37 2 25050900 25050900 + Missense_Mutation SNP A T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ALMS1 7840 broad.mit.edu 37 2 73680749 73680749 + Silent SNP A G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ALPK3 57538 hgsc.bcm.edu;ucsc.edu 37 15 85407697 85407697 + Frame_Shift_Del DEL C C - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ANGPT4 51378 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 896710 896710 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ARFGEF2 10564 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 47604916 47604916 + Silent SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ARIH1 25820 broad.mit.edu 37 15 72873082 72873082 + Missense_Mutation SNP C A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ASAP1 50807 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 131136342 131136342 + Missense_Mutation SNP C C G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a BAZ2B 29994 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 160245882 160245882 + Missense_Mutation SNP C C G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a C1orf114 57821 hgsc.bcm.edu;ucsc.edu 37 1 169394116 169394117 + Frame_Shift_Ins INS - - C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a C22orf41 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 50994825 50994825 + Missense_Mutation SNP C C A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a C6orf118 168090 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 165715542 165715542 + Missense_Mutation SNP C C T rs143539145 TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CALD1 800 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 134618404 134618404 + Missense_Mutation SNP T T G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CAMTA2 23125 broad.mit.edu;ucsc.edu 37 17 4877038 4877038 + Silent SNP T C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CDH8 1006 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 61854956 61854956 + Missense_Mutation SNP C C G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CKAP2L 150468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 113509843 113509843 + Splice_Site SNP C C A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CLCN1 1180 hgsc.bcm.edu;ucsc.edu 37 7 143048913 143048913 + Frame_Shift_Del DEL C C - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CLTC 1213 broad.mit.edu;ucsc.edu 37 17 57746161 57746161 + Missense_Mutation SNP A T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a COASY 80347 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 40715165 40715165 + Silent SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a COL12A1 1303 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 75864169 75864169 + Silent SNP G G C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a COL4A6 1288 broad.mit.edu 37 X 107400258 107400258 + Missense_Mutation SNP C T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CROCCL1 0 broad.mit.edu 37 1 16946437 16946437 + RNA SNP C T T rs2262202 by2hit2allele;alternate_allele TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CSMD3 114788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 113349913 113349913 + Missense_Mutation SNP A A C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a CTAGE9 643854 hgsc.bcm.edu 37 6 132032041 132032041 + Frame_Shift_Del DEL A A - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a DCAF8L2 347442 broad.mit.edu 37 X 27765420 27765421 + In_Frame_Ins INS - ATACAA ATACAA rs34350719 alternate_allele TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a DGKZ 8525 broad.mit.edu 37 11 46388175 46388175 + Silent SNP G A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a DPF2 5977 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 65113420 65113420 + Silent SNP A A C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a DYNC2H1 79659 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 103057148 103057148 + Missense_Mutation SNP G G C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a EEF1D 1936 broad.mit.edu;hgsc.bcm.edu 37 8 144668953 144668953 + Silent SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a EIF3C 8663 hgsc.bcm.edu 37 16 28403353 28403355 + In_Frame_Del DEL TCC TCC - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 TCC TCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a EP300 2033 broad.mit.edu;ucsc.edu 37 22 41573737 41573737 + Missense_Mutation SNP T C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a EPB41L3 23136 broad.mit.edu;hgsc.bcm.edu 37 18 5396318 5396318 + Missense_Mutation SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ESPL1 9700 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 53685805 53685805 + Missense_Mutation SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ESRP2 80004 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 68264909 68264909 + Missense_Mutation SNP G G C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a FAM18A 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 10864178 10864178 + Missense_Mutation SNP C C A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a FAM59A 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 29847906 29847906 + Missense_Mutation SNP C C A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a FLG2 388698 hgsc.bcm.edu;ucsc.edu 37 1 152327665 152327670 + In_Frame_Del DEL CCCGAA CCCGAA - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 CCCGAA CCCGAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a FTSJD1 55783 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71318090 71318090 + Silent SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a GATAD2B 57459 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 153782691 153782691 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a GPR83 10888 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 94113463 94113463 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a GREB1 9687 broad.mit.edu;hgsc.bcm.edu 37 2 11767208 11767208 + Missense_Mutation SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a GRIN3A 116443 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 104499650 104499650 + Silent SNP G G T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a GZF1 64412 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 23345603 23345603 + Missense_Mutation SNP G G T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a HN1L 90861 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 1735538 1735538 + Missense_Mutation SNP T T G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a IDI1 3422 hgsc.bcm.edu;ucsc.edu 37 10 1088643 1088643 + Frame_Shift_Del DEL T T - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a IL2RB 3560 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 37539570 37539570 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a INSC 387755 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 15267524 15267524 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a IPO13 9670 broad.mit.edu 37 1 44433044 44433044 + Missense_Mutation SNP G T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a IRX6 79190 broad.mit.edu 37 16 55362619 55362619 + Silent SNP T C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ITGB1 3688 broad.mit.edu;hgsc.bcm.edu 37 10 33199330 33199330 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a KCNH7 90134 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 163241253 163241253 + Missense_Mutation SNP T T G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a KRTAP9-2 83899 hgsc.bcm.edu 37 17 39383323 39383334 + In_Frame_Del DEL CTGCTGCCAGCC CTGCTGCCAGCC - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 CTGCTGCCAGCC CTGCTGCCAGCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a LAMA5 3911 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 60895846 60895846 + Silent SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a LENG9 94059 broad.mit.edu;ucsc.edu 37 19 54973869 54973869 + Missense_Mutation SNP G C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a LMBR1L 55716 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49495927 49495927 + Silent SNP A A G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a LOXHD1 125336 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 44137417 44137417 + Silent SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MCM3AP 8888 broad.mit.edu;ucsc.edu 37 21 47685911 47685911 + Missense_Mutation SNP T A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MGAT5 4249 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 135012082 135012082 + Silent SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MIR548N 100302152 hgsc.bcm.edu;ucsc.edu 37 2 179344242 179344242 + RNA SNP C C G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MLL2 8085 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49436557 49436557 + Missense_Mutation SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MLL2 8085 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49436558 49436558 + Silent SNP G G C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MOBKL2C 0 broad.mit.edu 37 1 47075867 47075867 + Missense_Mutation SNP A T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MUC15 143662 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 26582750 26582750 + Silent SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MUC16 94025 hgsc.bcm.edu 37 19 9048364 9048369 + In_Frame_Del DEL AGTTGG AGTTGG - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 AGTTGG AGTTGG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MUC17 140453 hgsc.bcm.edu;ucsc.edu 37 7 100678377 100678378 + Frame_Shift_Ins INS - - C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MUC17 140453 hgsc.bcm.edu;ucsc.edu 37 7 100678380 100678380 + Frame_Shift_Del DEL A A - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MYH1 4619 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 10404734 10404734 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MYO18A 399687 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27438508 27438508 + Missense_Mutation SNP C C A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a MYO18A 399687 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27438520 27438520 + Missense_Mutation SNP T T G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a NAV2 89797 broad.mit.edu;ucsc.edu 37 11 20078104 20078104 + Silent SNP C T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a NEK9 91754 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 75553771 75553771 + Missense_Mutation SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a NOTCH2 4853 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 120497758 120497758 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a NR2C1 7181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 95422176 95422176 + Silent SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a NR4A1 3164 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 52448382 52448382 + Silent SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a NUDT12 83594 hgsc.bcm.edu;ucsc.edu 37 5 102894735 102894736 + In_Frame_Ins INS - - CAG novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a OR4F6 390648 hgsc.bcm.edu;ucsc.edu 37 15 102346601 102346601 + Frame_Shift_Del DEL A A - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PABPC1 26986 broad.mit.edu;hgsc.bcm.edu 37 8 101725345 101725345 + Silent SNP T T G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T T G T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PABPC1 26986 broad.mit.edu;hgsc.bcm.edu 37 8 101725366 101725366 + Missense_Mutation SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PAPOLG 64895 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 61021866 61021866 + Frame_Shift_Del DEL T T - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PARP10 84875 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 145059205 145059205 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PCDHB6 56130 hgsc.bcm.edu;ucsc.edu 37 5 140529900 140529900 + Frame_Shift_Del DEL T T - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PDE4C 5143 broad.mit.edu 37 19 18322678 18322678 + Missense_Mutation SNP G A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PDRG1 81572 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 30538174 30538174 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PIK3R4 30849 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 130452841 130452841 + Missense_Mutation SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PKN3 29941 broad.mit.edu;ucsc.edu 37 9 131480826 131480826 + Splice_Site SNP A C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PLXNB1 5364 broad.mit.edu 37 3 48461366 48461366 + Missense_Mutation SNP C G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PRPF8 10594 broad.mit.edu;ucsc.edu 37 17 1564002 1564002 + Missense_Mutation SNP T A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PRR14 78994 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 30667486 30667486 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PSMA6 5687 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 35777199 35777199 + Splice_Site SNP G G C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a PTPRQ 374462 hgsc.bcm.edu 37 12 80943506 80943523 + In_Frame_Del DEL TGAAACAGGTAACTAACG TGAAACAGGTAACTAACG - rs141686707 by1000genomes TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 TGAAACAGGTAACTAACG TGAAACAGGTAACTAACG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a QPRT 23475 broad.mit.edu;ucsc.edu 37 16 29706503 29706503 + Missense_Mutation SNP G C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a RAC3 5881 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 79990881 79990881 + Missense_Mutation SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a RAET1E 135250 broad.mit.edu 37 6 150211277 150211277 + Silent SNP A G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a REV1 51455 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 100055089 100055089 + Missense_Mutation SNP C C G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a RNF25 64320 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 219532706 219532706 + Splice_Site SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SCTR 6344 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 120204412 120204412 + Missense_Mutation SNP A A G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SEMA6D 80031 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 48063502 48063502 + Silent SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SEPHS2 22928 broad.mit.edu;ucsc.edu 37 16 30456187 30456187 + Missense_Mutation SNP A G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SERPINB8 5271 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 61654390 61654390 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SETD2 29072 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 47127749 47127749 + Frame_Shift_Del DEL A A - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A A - A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SLC27A1 376497 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 17611618 17611618 + Missense_Mutation SNP G G T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SLC2A14 144195 broad.mit.edu;hgsc.bcm.edu 37 12 7967042 7967042 + Missense_Mutation SNP C C T rs140568143 byfrequency TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SLC35B2 347734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 44224429 44224429 + Silent SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SLC44A1 23446 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 108147762 108147762 + Missense_Mutation SNP T T A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a SLC5A10 125206 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 18863863 18863863 + Silent SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TAF15 8148 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 34147197 34147197 + Silent SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TBC1D1 23216 broad.mit.edu;ucsc.edu 37 4 38023333 38023333 + Missense_Mutation SNP A T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TECRL 253017 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 65147225 65147225 + Silent SNP A A G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TG 7038 broad.mit.edu;ucsc.edu 37 8 134030154 134030154 + Missense_Mutation SNP C T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TJP2 9414 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 71855060 71855060 + Missense_Mutation SNP A A G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TM7SF4 0 broad.mit.edu;ucsc.edu 37 8 105361373 105361373 + Missense_Mutation SNP A G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TMUB2 79089 broad.mit.edu 37 17 42266658 42266658 + Missense_Mutation SNP C A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TREML1 340205 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 41117371 41117371 + Missense_Mutation SNP G G T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a TTN 7273 hgsc.bcm.edu;ucsc.edu 37 2 179516214 179516219 + In_Frame_Del DEL CACCAG CACCAG - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 CACCAG CACCAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a UGT1A7 54577 broad.mit.edu;hgsc.bcm.edu 37 2 234591121 234591121 + Missense_Mutation SNP G G A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a Unknown 0 broad.mit.edu 37 15 29084045 29084045 + RNA SNP T G G rs75345913 bycluster TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a Unknown 0 broad.mit.edu 37 9 68413565 68413565 + RNA SNP G A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a Unknown 0 broad.mit.edu 37 9 68413569 68413569 + RNA SNP C T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a USH2A 7399 hgsc.bcm.edu;ucsc.edu 37 1 216595674 216595674 + Frame_Shift_Del DEL T T - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a USP37 57695 broad.mit.edu;ucsc.edu 37 2 219353073 219353073 + Missense_Mutation SNP G T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a VMO1 284013 broad.mit.edu 37 17 4689557 4689557 + Missense_Mutation SNP C T T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a VPS13C 54832 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 62254726 62254726 + Missense_Mutation SNP T T C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a WDFY4 57705 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 50034823 50034823 + Silent SNP C C T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a WDR52 55779 broad.mit.edu 37 3 113128137 113128137 + Missense_Mutation SNP A G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF232 7775 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 5009701 5009701 + Silent SNP A A G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF256 10172 broad.mit.edu 37 19 58453894 58453894 + Silent SNP T A A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF256 10172 broad.mit.edu 37 19 58453896 58453896 + Missense_Mutation SNP T G G novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF345 25850 hgsc.bcm.edu 37 19 37368165 37368166 + Frame_Shift_Ins INS - - T novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF345 25850 hgsc.bcm.edu 37 19 37368169 37368169 + Frame_Shift_Del DEL A A - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF496 84838 broad.mit.edu;ucsc.edu 37 1 247463877 247463877 + Missense_Mutation SNP G C C novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF621 285268 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 40574189 40574189 + Missense_Mutation SNP C C A novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a ZNF799 90576 broad.mit.edu;hgsc.bcm.edu 37 19 12501322 12501322 + Frame_Shift_Del DEL A A - novel TCGA-B0-4811-01A-01D-1501-10 TCGA-B0-4811-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a46182dc-2481-4911-9f6b-9532666f9f8c 96a5756f-57e4-4f88-9a51-b92d406a578a