Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS12 81792 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 33637849 33637849 + Missense_Mutation SNP G G C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ADAMTS2 9509 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 178557016 178557016 + Missense_Mutation SNP C C T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ADSL 158 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 40742592 40742592 + Silent SNP C C G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f AKAP12 9590 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 151671390 151671390 + Missense_Mutation SNP C C A rs143476871 alternate_allele TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ALDH3B1 221 broad.mit.edu;hgsc.bcm.edu 37 11 67789230 67789230 + Missense_Mutation SNP C C G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ANK3 288 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 61835232 61835232 + Missense_Mutation SNP A A G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ANKIB1 54467 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 92027037 92027038 + Frame_Shift_Del DEL AT AT - novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 AT AT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ANKRD30BL 554226 hgsc.bcm.edu 37 2 133014546 133014546 + RNA SNP C C G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f BAAT 570 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 104130484 104130484 + Missense_Mutation SNP T T A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f C14orf169 79697 hgsc.bcm.edu 37 14 73957981 73957982 + Frame_Shift_Ins INS - - C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f C1orf31 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 234509989 234509989 + Nonsense_Mutation SNP G G T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f C8A 731 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 57351710 57351710 + Silent SNP A A T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f CDC40 51362 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 110501714 110501714 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f CSNK1A1 1452 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 148904678 148904678 + Missense_Mutation SNP C C A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f CTH 1491 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 70896063 70896063 + Missense_Mutation SNP G G A rs147044875 TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f CUL3 8452 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 225342980 225342980 + Silent SNP T T C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f CYP2E1 1571 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 135347393 135347393 + Missense_Mutation SNP A A C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f DDX24 57062 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 94528593 94528593 + Nonsense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ERBB2IP 55914 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 65350483 65350483 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ESPL1 9700 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 53685545 53685545 + Silent SNP C C G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f FANCM 57697 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 45639810 45639810 + Missense_Mutation SNP T T C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f FILIP1L 11259 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 99568696 99568696 + Silent SNP A A G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GABRG1 2565 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 46043110 46043110 + Silent SNP C C T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GFOD1 54438 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 13365468 13365468 + Missense_Mutation SNP A A G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GOLGA3 2802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 133354283 133354283 + Missense_Mutation SNP G G T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GPR109A 0 broad.mit.edu;hgsc.bcm.edu 37 12 123187634 123187634 + Missense_Mutation SNP A A T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GPR109A 0 broad.mit.edu;hgsc.bcm.edu 37 12 123187635 123187635 + Silent SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f INTS1 26173 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 1523722 1523722 + Missense_Mutation SNP C C A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f LYSMD4 145748 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 100269896 100269896 + Missense_Mutation SNP T T G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f MAP1S 55201 broad.mit.edu;hgsc.bcm.edu 37 19 17837059 17837059 + Missense_Mutation SNP T T C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f MYO18A 399687 broad.mit.edu;hgsc.bcm.edu 37 17 27493028 27493028 + Missense_Mutation SNP G G C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NCAPH2 29781 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 50960640 50960640 + Missense_Mutation SNP A A C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NFATC4 4776 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 24839730 24839730 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NOL8 55035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 95062258 95062258 + Silent SNP G G C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NRIP1 8204 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 16338673 16338673 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NUDCD1 84955 hgsc.bcm.edu;ucsc.edu 37 8 110346160 110346161 + Frame_Shift_Del DEL AG AG - novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NUP98 4928 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 3797242 3797242 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f OXSM 54995 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 25835880 25835880 + Silent SNP T T G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f P2RX3 5024 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 57117325 57117325 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f PI4KA 5297 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 21161667 21161667 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f POLQ 10721 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 121208546 121208546 + Missense_Mutation SNP A A T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f PRRC2C 23215 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 171556219 171556219 + Silent SNP T T A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f PSMC1 5700 broad.mit.edu;hgsc.bcm.edu 37 14 90730154 90730154 + Missense_Mutation SNP T T A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f RSC1A1 6248 hgsc.bcm.edu;ucsc.edu 37 1 15987206 15987206 + Frame_Shift_Del DEL T T - novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f SCAI 286205 broad.mit.edu;hgsc.bcm.edu 37 9 127789180 127789180 + Silent SNP T T G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f SERINC5 256987 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 79473191 79473191 + Missense_Mutation SNP C C G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f SF3A1 10291 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 30740940 30740940 + Silent SNP T T A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f SLC36A1 206358 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 150856274 150856274 + Missense_Mutation SNP G G A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f SPINK2 6691 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 57677912 57677912 + Missense_Mutation SNP G G C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f TEC 100124696 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 48170607 48170607 + Missense_Mutation SNP T T G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179422748 179422748 + Missense_Mutation SNP G G C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f TTN 7273 broad.mit.edu;ucsc.edu 37 2 179439235 179439235 + Missense_Mutation SNP G T T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f UBE2D1 7321 broad.mit.edu;hgsc.bcm.edu 37 10 60124536 60124536 + Silent SNP T T A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f UBQLN1 29979 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 86279973 86279973 + Missense_Mutation SNP C C T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f USP4 7375 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 49337921 49337921 + Silent SNP G G A rs142071789 alternate_allele TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f VHL 7428 hgsc.bcm.edu 37 3 10191572 10191572 + Missense_Mutation SNP G G C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f WISP1 8840 hgsc.bcm.edu;ucsc.edu 37 8 134233012 134233013 + Frame_Shift_Del DEL TG TG - novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 TG TG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ZEB2 9839 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 145157472 145157472 + Missense_Mutation SNP C C G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ZNF808 388558 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53057358 53057358 + Nonsense_Mutation SNP A A T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GBX2 2637 broad.mit.edu 37 2 237076427 237076435 + In_Frame_Del DEL GGCGGCGGC - - novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 GGCGGCGGC GGCGGCGGC . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f GPR85 54329 broad.mit.edu 37 7 112724827 112724827 + Translation_Start_Site SNP T C C novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f MAP4K4 9448 broad.mit.edu 37 2 102486844 102486844 + Silent SNP C G G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f NLRP5 126206 broad.mit.edu 37 19 56539568 56539568 + Missense_Mutation SNP G A A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f PIGT 51604 broad.mit.edu 37 20 44044813 44044813 + Missense_Mutation SNP C T T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f PODNL1 79883 broad.mit.edu 37 19 14043756 14043756 + Frame_Shift_Del DEL A - - novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f PRB3 5544 broad.mit.edu 37 12 11420500 11420500 + Missense_Mutation SNP G T T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f SIN3A 25942 broad.mit.edu 37 15 75705213 75705213 + Missense_Mutation SNP A G G novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f TOP3A 7156 broad.mit.edu 37 17 18196163 18196163 + Silent SNP G A A novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f TUBA1A 7846 broad.mit.edu 37 12 49579013 49579013 + Missense_Mutation SNP C T T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ZFYVE1 53349 broad.mit.edu 37 14 73465019 73465019 + Missense_Mutation SNP G T T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f ZGLP1 100125288 broad.mit.edu 37 19 10419249 10419249 + Missense_Mutation SNP C T T novel TCGA-EU-5906-01A-11D-1669-08 TCGA-EU-5906-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 050dc3b7-e560-44f4-a05c-8c792d8467a8 e096d1a2-684d-43cc-b84c-b302aaf33c3f