Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADCK2 90956 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 140373652 140373652 + Silent SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a ANKRD32 84250 hgsc.bcm.edu;ucsc.edu 37 5 94030788 94030789 + Frame_Shift_Ins INS - - A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a ANKRD52 283373 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 56647514 56647514 + Missense_Mutation SNP A A T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a ANKRD7 56311 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 117864901 117864901 + Missense_Mutation SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a AP3B2 8120 broad.mit.edu;hgsc.bcm.edu 37 15 83349316 83349316 + Silent SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a ATM 472 hgsc.bcm.edu;ucsc.edu 37 11 108127063 108127063 + Frame_Shift_Del DEL C C - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a ATP11A 23250 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 113508719 113508719 + Silent SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a BBS4 585 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 73029249 73029249 + Missense_Mutation SNP T T G novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a BTBD11 121551 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 107713793 107713793 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a C1orf135 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 26162026 26162026 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a CAT 847 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 34478280 34478280 + Silent SNP T T C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a CEACAM5 1048 broad.mit.edu;hgsc.bcm.edu 37 19 42213711 42213711 + Silent SNP C C A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a CSMD2 114784 broad.mit.edu;hgsc.bcm.edu 37 1 34180251 34180251 + Silent SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a CTR9 9646 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 10785039 10785039 + Missense_Mutation SNP T T A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a EMR4P 326342 broad.mit.edu;hgsc.bcm.edu 37 19 6990855 6990855 + RNA SNP A A C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a FAM169A 26049 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 74097435 74097435 + Missense_Mutation SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a FAM169A 26049 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 74097436 74097436 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a GGT7 2686 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 33447323 33447323 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a GOLGA2 2801 hgsc.bcm.edu;ucsc.edu 37 9 131019384 131019384 + Frame_Shift_Del DEL C C - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a GOLGA3 2802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 133351815 133351815 + Missense_Mutation SNP T T A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a GPR4 2828 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 46094945 46094945 + Silent SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a HERC3 8916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 89577067 89577067 + Missense_Mutation SNP A A G novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a IL27RA 9466 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 14157046 14157046 + Silent SNP C C G novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a IQGAP1 8826 hgsc.bcm.edu;ucsc.edu 37 15 91035819 91035819 + Frame_Shift_Del DEL G G - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a JUB 0 hgsc.bcm.edu;ucsc.edu 37 14 23444255 23444260 + In_Frame_Del DEL TTGCAA TTGCAA - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 TTGCAA TTGCAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a KIAA1683 80726 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 18377009 18377009 + Silent SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a KRTAP5-1 387264 hgsc.bcm.edu 37 11 1606121 1606150 + In_Frame_Del DEL CCACAGCCACCCTTGGATCCCCCACAAGAG CCACAGCCACCCTTGGATCCCCCACAAGAG - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 CCACAGCCACCCTTGGATCCCCCACAAGAG CCACAGCCACCCTTGGATCCCCCACAAGAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a LRRIQ3 127255 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 74507410 74507410 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a MED16 10025 broad.mit.edu;hgsc.bcm.edu 37 19 884992 884992 + Missense_Mutation SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a MIR548N 100302152 broad.mit.edu;hgsc.bcm.edu 37 2 179403617 179403617 + RNA SNP A A C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a MLL3 58508 hgsc.bcm.edu;ucsc.edu 37 7 151836874 151836875 + Frame_Shift_Del DEL CC CC - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 CC CC CC - CC CC Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a MUC20 200958 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 195453061 195453061 + Silent SNP C C A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a NCAPD3 23310 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 134079245 134079245 + Missense_Mutation SNP A A T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a NECAB1 64168 broad.mit.edu;hgsc.bcm.edu 37 8 91962067 91962067 + Missense_Mutation SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a NFASC 23114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 204971726 204971726 + Missense_Mutation SNP A A T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a NLRP4 147945 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 56363605 56363605 + Silent SNP A A G novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a OR10G4 390264 broad.mit.edu;hgsc.bcm.edu 37 11 123886863 123886863 + Missense_Mutation SNP C C A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a OR6C6 283365 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 55688731 55688731 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PADI3 51702 broad.mit.edu;ucsc.edu 37 1 17609393 17609393 + Missense_Mutation SNP C G G novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52692236 52692236 + Frame_Shift_Del DEL A A - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PCDHGA1 56114 broad.mit.edu;hgsc.bcm.edu 37 5 140712348 140712348 + Silent SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PDLIM4 8572 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 131606692 131606692 + Missense_Mutation SNP G G C rs141857035 byfrequency;alternate_allele TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PHLPP2 23035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71683884 71683884 + Missense_Mutation SNP A A C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PKD2L1 9033 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 102089625 102089625 + Splice_Site SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PMS2 5395 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 6048687 6048687 + RNA SNP G G C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PRDM11 56981 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 45245952 45245952 + Silent SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a PRDM11 56981 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 45245953 45245953 + Missense_Mutation SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a RAD51AP2 729475 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 17696802 17696802 + Missense_Mutation SNP C C G rs140673266 by1000genomes;alternate_allele TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a RERG 85004 broad.mit.edu;ucsc.edu 37 12 15262351 15262351 + Missense_Mutation SNP A C C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a RSPRY1 89970 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 57255221 57255221 + Missense_Mutation SNP G G C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a RSPRY1 89970 broad.mit.edu;ucsc.edu 37 16 57255223 57255223 + Missense_Mutation SNP A T T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a SEZ6 124925 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27284413 27284413 + Missense_Mutation SNP C C T rs117736100 by1000genomes TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a SLC10A7 84068 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 147438224 147438224 + Missense_Mutation SNP A A G novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a SLC22A13 9390 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 38307442 38307442 + Missense_Mutation SNP C C A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a SOX5 6660 broad.mit.edu;ucsc.edu 37 12 23818447 23818447 + Missense_Mutation SNP G A A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a TRIM6 117854 hgsc.bcm.edu;ucsc.edu 37 11 5624941 5624943 + In_Frame_Del DEL GGA GGA - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 GGA GGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a TTLL4 9654 broad.mit.edu;ucsc.edu 37 2 219609908 219609908 + Missense_Mutation SNP T A A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a VHL 7428 hgsc.bcm.edu;ucsc.edu 37 3 10188319 10188344 + In_Frame_Del DEL AGGTACTGACGTTTTACTTTTTAAAA AGGTACTGACGTTTTACTTTTTAAAA - novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 AGGTACTGACGTTTTACTTTTTAAAA AGGTACTGACGTTTTACTTTTTAAAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a VPS13D 55187 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 12408985 12408985 + Missense_Mutation SNP G G A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a WDR91 29062 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 134891906 134891906 + Missense_Mutation SNP T T A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a WHSC1 7468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 1980470 1980470 + Missense_Mutation SNP C C T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a YIPF4 84272 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 32526479 32526479 + Missense_Mutation SNP T T C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a DNMT1 1786 broad.mit.edu 37 19 10246885 10246885 + Missense_Mutation SNP T C C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a DTX1 1840 broad.mit.edu 37 12 113515329 113515329 + Silent SNP C A A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a KRTAP4-11 653240 broad.mit.edu 37 17 39274150 39274150 + Missense_Mutation SNP T A A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a LOC284232 0 broad.mit.edu 37 13 19415644 19415644 + RNA SNP C A A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a LOC347376 0 broad.mit.edu 37 X 50648823 50648823 + Missense_Mutation SNP G A A novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a TLN1 7094 broad.mit.edu 37 9 35718904 35718904 + Missense_Mutation SNP G T T novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a TRUB1 142940 broad.mit.edu 37 10 116698112 116698112 + Missense_Mutation SNP A C C novel TCGA-CZ-5986-01A-11D-1669-08 TCGA-CZ-5986-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0abded91-5a5f-4923-bcf0-7fdda64ae232 a6338f94-6519-4637-9948-0990b8e3598a