Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AASDH 132949 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 57215942 57215942 + Frame_Shift_Del DEL T T - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ABCA13 154664 broad.mit.edu;ucsc.edu 37 7 48682951 48682951 + Missense_Mutation SNP G A A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ABCB5 340273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 20739468 20739468 + Silent SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ABCD3 5825 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 94943864 94943864 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ADRA2B 151 hgsc.bcm.edu 37 2 96780986 96780987 + In_Frame_Ins INS - - TCCTCCTCT rs34667759 bycluster;by1000genomes TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e AFF3 3899 hgsc.bcm.edu 37 2 100210335 100210340 + In_Frame_Del DEL GGCTGA GGCTGA - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 GGCTGA GGCTGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e AIFM3 150209 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 21331018 21331018 + Missense_Mutation SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e AIM1 202 broad.mit.edu;hgsc.bcm.edu 37 6 106987378 106987378 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A A G A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ALDH1A2 8854 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 58257978 58257978 + Missense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e APLP2 334 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 129999984 129999984 + Missense_Mutation SNP G G C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e APOB 338 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 21225676 21225676 + Silent SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e APPL2 55198 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 105589090 105589090 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ATP9B 374868 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 76870367 76870367 + Nonsense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e B3GALT4 8705 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 33246066 33246066 + Missense_Mutation SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e BRWD3 254065 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 79948521 79948521 + Missense_Mutation SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e C10orf79 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 105924006 105924007 + Frame_Shift_Ins INS - - A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e C10orf79 0 hgsc.bcm.edu 37 10 105924008 105924008 + Silent SNP T T C rs146641264 byfrequency TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e C17orf75 64149 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 30660470 30660470 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e C9orf174 100499483 hgsc.bcm.edu 37 9 100079370 100079371 + Frame_Shift_Ins INS - - A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e CABLES2 81928 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 60971621 60971621 + Silent SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e CHAF1B 8208 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 37785583 37785583 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e CLK2 1196 broad.mit.edu;ucsc.edu 37 1 155238498 155238498 + Splice_Site DEL C - - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e CSAG1 158511 broad.mit.edu;hgsc.bcm.edu 37 X 151909172 151909172 + Silent SNP C C A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e CYP27C1 339761 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 127961091 127961091 + Missense_Mutation SNP G G C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e CYP4A11 1579 broad.mit.edu;hgsc.bcm.edu 37 1 47399695 47399695 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e DNAJB11 51726 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 186299285 186299285 + Silent SNP C C T rs138789127 TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e DNAJC15 29103 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 43652822 43652822 + Silent SNP A A T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e EME2 197342 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 1825398 1825398 + Nonsense_Mutation SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e EP300 2033 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 41574358 41574358 + Missense_Mutation SNP C C A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ERBB2 2064 hgsc.bcm.edu;ucsc.edu 37 17 37871549 37871550 + Frame_Shift_Ins INS - - C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e FAM155A 728215 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 108518168 108518168 + Silent SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e FAT1 2195 broad.mit.edu;hgsc.bcm.edu 37 4 187535488 187535488 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e G3BP1 10146 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 151166245 151166245 + Silent SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e GAS2 2620 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 22707336 22707336 + Splice_Site SNP G G C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e HBG1 3047 hgsc.bcm.edu 37 11 5271024 5271024 + Frame_Shift_Del DEL A A - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e HBG2 3048 hgsc.bcm.edu 37 11 5275948 5275948 + Frame_Shift_Del DEL A A - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e IARS 3376 broad.mit.edu;ucsc.edu 37 9 95027315 95027315 + Silent SNP G A A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e IFT172 26160 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 27704017 27704017 + Missense_Mutation SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e IMPG1 3617 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 76715159 76715159 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e INPP4A 3631 hgsc.bcm.edu;ucsc.edu 37 2 99156037 99156037 + Frame_Shift_Del DEL T T - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ITM2B 9445 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 48830433 48830438 + In_Frame_Del DEL GAAGAA GAAGAA - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 GAAGAA GAAGAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e JAK1 3716 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 65344794 65344794 + Nonsense_Mutation SNP A A T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e KIAA0174 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71961673 71961673 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e KIF18A 81930 broad.mit.edu;ucsc.edu 37 11 28045366 28045366 + Missense_Mutation SNP C T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e KPRP 448834 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 152732829 152732829 + Nonsense_Mutation SNP C C A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e LIMD1 8994 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 45637344 45637344 + Missense_Mutation SNP G G C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e LMAN1L 79748 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 75108801 75108801 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e LRP1 4035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 57590881 57590881 + Nonsense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e LRP1B 53353 hgsc.bcm.edu;ucsc.edu 37 2 141812795 141812796 + Frame_Shift_Del DEL CC CC - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 CC CC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e MAPT 4137 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 44061288 44061288 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e MED13 9969 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 60129921 60129921 + Silent SNP T T C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e MGAM 8972 hgsc.bcm.edu 37 7 141760115 141760115 + Frame_Shift_Del DEL G G - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e MKKS 8195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 10393730 10393730 + Missense_Mutation SNP T T C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e MYOC 4653 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 171605694 171605694 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e NBR1 4077 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 41341626 41341626 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e NCOA4 8031 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 51584968 51584968 + Missense_Mutation SNP A A C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e NCOA6 23054 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 33329729 33329729 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e NOX4 50507 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 89223701 89223701 + Silent SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e NUP210L 91181 hgsc.bcm.edu;ucsc.edu 37 1 154026805 154026807 + In_Frame_Del DEL TAT TAT - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 TAT TAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e OPLAH 26873 hgsc.bcm.edu 37 8 145106939 145106940 + Frame_Shift_Del DEL CC CC - rs145450236 bycluster;by1000genomes TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 CC CC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ORMDL3 94103 broad.mit.edu;ucsc.edu 37 17 38079479 38079479 + Missense_Mutation SNP G T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PAN3 255967 broad.mit.edu;hgsc.bcm.edu 37 13 28750663 28750663 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PCDHGB7 56099 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140798209 140798209 + Silent SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PCDHGC5 56097 broad.mit.edu;ucsc.edu 37 5 140890569 140890569 + Silent SNP C T T rs143630962 TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PCNX 22990 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 71444679 71444679 + Missense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PIAS1 8554 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 68457098 68457098 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PLCE1 51196 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 95791726 95791726 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e POLM 27434 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 44113448 44113448 + Silent SNP T T C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PRIM2 5558 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 57185282 57185282 + Missense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PRODH2 58510 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 36303397 36303397 + Missense_Mutation SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e RAB36 9609 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 23501360 23501360 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e RALY 22913 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 32663747 32663747 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e RBM34 23029 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 235318310 235318311 + Frame_Shift_Del DEL TG TG - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 TG TG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e RFX1 5989 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 14083791 14083791 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e RPRD2 23248 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 150444821 150444821 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e RUNDC3B 154661 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 87445570 87445570 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SCN5A 6331 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 38647616 38647616 + Silent SNP G G T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SEL1L2 80343 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 13830874 13830874 + Missense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SEZ6 124925 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27287870 27287870 + Silent SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SIGLEC1 6614 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 3673709 3673709 + Missense_Mutation SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SLC25A28 81894 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 101373512 101373512 + Missense_Mutation SNP T T G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SLC3A1 6519 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 44507853 44507853 + Splice_Site SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SLC4A5 57835 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 74477471 74477471 + Missense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SPEN 23013 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 16260312 16260312 + Missense_Mutation SNP A A C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A A C A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e STAG2 10735 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 123184076 123184076 + Missense_Mutation SNP A A C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A A C A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SUZ12 23512 broad.mit.edu;hgsc.bcm.edu 37 17 30310113 30310113 + Missense_Mutation SNP T T A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SYNE2 23224 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 64532268 64532268 + Missense_Mutation SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SYNE2 23224 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 64532269 64532269 + Silent SNP G G C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TARBP1 6894 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 234536934 234536934 + Missense_Mutation SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TEX13A 56157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 104464107 104464107 + Missense_Mutation SNP A A C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TMCO3 55002 hgsc.bcm.edu;ucsc.edu 37 13 114156172 114156173 + Frame_Shift_Ins INS - - CTTCAGGA novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TMEM195 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 15433778 15433778 + Silent SNP T T C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TMPRSS11A 339967 broad.mit.edu;ucsc.edu 37 4 68780433 68780433 + Missense_Mutation SNP T C C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TNIK 23043 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 170945979 170945979 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TPI1 7167 broad.mit.edu;hgsc.bcm.edu 37 12 6979622 6979622 + RNA SNP C C T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TRAFD1 10906 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 112572550 112572550 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TSC2 7249 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 2134519 2134519 + Silent SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TUT1 64852 broad.mit.edu;hgsc.bcm.edu 37 11 62348882 62348882 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e VTN 7448 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 26696549 26696549 + Missense_Mutation SNP C C G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e WDR5B 54554 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 122133533 122133533 + Silent SNP A A T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e WDR70 55100 broad.mit.edu;hgsc.bcm.edu 37 5 37379472 37379472 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ZBTB48 3104 hgsc.bcm.edu;ucsc.edu 37 1 6647268 6647280 + Frame_Shift_Del DEL TCCTCCTGCTCCC TCCTCCTGCTCCC - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 TCCTCCTGCTCCC TCCTCCTGCTCCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ZIC4 84107 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 147114035 147114035 + Missense_Mutation SNP A A G novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ZNF556 80032 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 2877284 2877284 + Missense_Mutation SNP G G A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ZNF606 80095 broad.mit.edu;hgsc.bcm.edu 37 19 58512737 58512737 + Splice_Site SNP A A C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ZZEF1 23140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 3945851 3945851 + Frame_Shift_Del DEL A A - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ADAM6 8755 broad.mit.edu 37 14 106368500 106368500 + Splice_Site SNP C T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ANKRD30A 91074 broad.mit.edu 37 10 37478443 37478443 + Missense_Mutation SNP A G G rs71283286 alternate_allele TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ANKRD58 0 broad.mit.edu 37 X 118893385 118893385 + Missense_Mutation SNP G T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e DOCK2 1794 broad.mit.edu 37 5 169494626 169494626 + Missense_Mutation SNP T A A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e ENPP7 339221 broad.mit.edu 37 17 77707422 77707422 + Missense_Mutation SNP G A A rs145931726 TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e FAM116A 0 broad.mit.edu 37 3 57678668 57678668 + Silent SNP G A A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e FAM120A 23196 broad.mit.edu 37 9 96320221 96320221 + Missense_Mutation SNP A C C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e HSP90AB2P 391634 broad.mit.edu 37 4 13338959 13338959 + RNA SNP G A A novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e HSP90AB2P 391634 broad.mit.edu 37 4 13338960 13338960 + RNA SNP C T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e MSTO2P 100129405 broad.mit.edu 37 1 155718444 155718444 + RNA SNP T C C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e PTPN18 26469 broad.mit.edu 37 2 131129929 131129934 + In_Frame_Del DEL GACGGG - - rs112040677 bycluster;by1000genomes TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 GACGGG GACGGG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e SPINK8 646424 broad.mit.edu 37 3 48362546 48362546 + Missense_Mutation SNP G T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e Unknown 0 broad.mit.edu 37 X 64844726 64844727 + RNA DEL AG - - novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e WBP11P1 441818 broad.mit.edu 37 18 30091829 30091829 + RNA SNP A T T novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e HEPH 9843 broad.mit.edu 37 X 65474914 65474914 + Missense_Mutation SNP G T T rs146719428 TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e TTN 7273 broad.mit.edu 37 2 179434729 179434729 + Missense_Mutation SNP A C C novel TCGA-CZ-4859-01A-02D-1429-08 TCGA-CZ-4859-11A-01D-1429-08 A A A C A A Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 82c0b6e4-cb0f-4870-81c9-b45a93d6f5d3 3257f80f-9009-4ab9-a9b8-b93ad97bc18e