Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACAP2 23527 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 195009916 195009916 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 AMAC1 0 broad.mit.edu;hgsc.bcm.edu 37 17 33521121 33521121 + Missense_Mutation SNP G G A rs149963193 alternate_allele TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 ANXA6 309 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 150519791 150519791 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 APH1B 83464 broad.mit.edu;hgsc.bcm.edu 37 15 63569840 63569840 + Silent SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 ATP2A1 487 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 28909648 28909648 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 BMP5 653 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 55620404 55620404 + Missense_Mutation SNP T T A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 BRPF3 27154 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 36185716 36185716 + Silent SNP A A G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 C11orf46 0 broad.mit.edu;hgsc.bcm.edu 37 11 30358133 30358133 + Missense_Mutation SNP A A T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 C14orf106 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 45673409 45673409 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 C17orf80 55028 hgsc.bcm.edu 37 17 71241322 71241325 + Frame_Shift_Del DEL GTAA GTAA - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 GTAA GTAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 C9orf131 138724 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 35044086 35044086 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 CCDC109A 0 hgsc.bcm.edu;ucsc.edu 37 10 74645575 74645578 + Frame_Shift_Del DEL GATT GATT - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 GATT GATT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 CD1D 912 hgsc.bcm.edu;ucsc.edu 37 1 158151283 158151284 + Frame_Shift_Ins INS - - G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 CEP290 80184 hgsc.bcm.edu;ucsc.edu 37 12 88471086 88471086 + Frame_Shift_Del DEL A A - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 CIC 23152 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 42797181 42797181 + Missense_Mutation SNP G G C novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 CSMD2 114784 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 34033301 34033301 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 DNAH9 1770 broad.mit.edu;hgsc.bcm.edu 37 17 11593688 11593688 + Nonsense_Mutation SNP C C T rs144649934 TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 DST 667 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 56357198 56357198 + Nonsense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 EIF2C2 27161 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 141559213 141559213 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 EIF2C3 192669 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 36509078 36509078 + Missense_Mutation SNP A A G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 F11 2160 broad.mit.edu;hgsc.bcm.edu 37 4 187201213 187201213 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 FGD5 152273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 14964587 14964587 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 FSTL4 23105 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 132736492 132736492 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 GPRASP2 114928 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 101971084 101971084 + Silent SNP C C A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 GPRC5A 9052 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 13061472 13061472 + Missense_Mutation SNP C C G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 GRIN2B 2904 broad.mit.edu;hgsc.bcm.edu 37 12 13717155 13717155 + Missense_Mutation SNP C C G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 HIVEP1 3096 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 12120167 12120167 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 IRAK1BP1 134728 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 79607842 79607842 + Missense_Mutation SNP C C A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 KLHL17 339451 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 897302 897302 + Missense_Mutation SNP G G T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 KLHL17 339451 hgsc.bcm.edu;ucsc.edu 37 1 897301 897301 + Silent SNP G G T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 KPRP 448834 hgsc.bcm.edu;ucsc.edu 37 1 152732937 152732937 + Frame_Shift_Del DEL C C - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 LY6E 4061 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 144103076 144103076 + Missense_Mutation SNP G G C novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 LY6E 4061 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 144103077 144103077 + Silent SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 MARCH7 64844 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 160585646 160585646 + Missense_Mutation SNP A A G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 MUDENG 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 57748924 57748924 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 OR5P2 120065 broad.mit.edu;hgsc.bcm.edu 37 11 7818120 7818120 + Missense_Mutation SNP T T A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PABPC1 26986 hgsc.bcm.edu 37 8 101730036 101730037 + Frame_Shift_Ins INS - - C novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PCDHGB3 56102 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140750994 140750994 + Missense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PDE6B 5158 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 654278 654278 + Missense_Mutation SNP C C G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PLA2G4A 5321 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 186839572 186839572 + Silent SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PODXL 5420 broad.mit.edu;hgsc.bcm.edu 37 7 131194125 131194125 + Nonsense_Mutation SNP C C T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PPP1R3C 5507 hgsc.bcm.edu;ucsc.edu 37 10 93389894 93389894 + Frame_Shift_Del DEL G G - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PRKG2 5593 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 82126123 82126123 + Missense_Mutation SNP G G A rs187350442 by1000genomes TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PTPRT 11122 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 40944543 40944543 + Silent SNP C C A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 PTPRT 11122 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 40944544 40944544 + Missense_Mutation SNP C C A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 RPAP1 26015 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 41822090 41822090 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 RSPRY1 89970 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 57265168 57265168 + Missense_Mutation SNP T T C novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 SETBP1 26040 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 42618593 42618593 + Missense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 SLC13A5 284111 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 6594203 6594203 + Silent SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 SLC17A5 26503 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 74354149 74354149 + Missense_Mutation SNP T T G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 VHL 7428 broad.mit.edu;ucsc.edu 37 3 10188322 10188322 + Splice_Site SNP T C C rs5030815 bycluster TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 WDR25 79446 hgsc.bcm.edu;ucsc.edu 37 14 100847481 100847481 + Frame_Shift_Del DEL G G - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 ZMYM4 9202 broad.mit.edu;hgsc.bcm.edu 37 1 35870746 35870746 + Nonsense_Mutation SNP G G A novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 ZNF594 84622 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 5086703 5086703 + Silent SNP G G T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 ZNF749 388567 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 57954668 57954668 + Missense_Mutation SNP A A C novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 ARMCX5 64860 broad.mit.edu 37 X 101858509 101858509 + Silent SNP A T T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 FNDC3B 64778 broad.mit.edu 37 3 172096213 172096213 + Silent SNP C T T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 GGT5 2687 broad.mit.edu 37 22 24621029 24621029 + Missense_Mutation SNP T C C novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 LYL1 4066 broad.mit.edu 37 19 13211728 13211728 + Silent SNP C T T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 NID1 4811 broad.mit.edu 37 1 236192916 236192916 + Missense_Mutation SNP G T T novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 POLDIP2 26073 broad.mit.edu 37 17 26681591 26681591 + Frame_Shift_Del DEL A - - novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 CLSTN2 64084 broad.mit.edu 37 3 140122558 140122558 + Missense_Mutation SNP G A A rs145666342 TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222 EPHA6 285220 broad.mit.edu 37 3 96706398 96706398 + Silent SNP A G G novel TCGA-CZ-4856-01A-02D-1429-08 TCGA-CZ-4856-11A-01D-1429-08 A A A G A A Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 85e26450-4cb1-4a91-ad86-a6d44890ee97 10b5b613-7abd-42dd-bb9d-a166c34e4222