Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA4 24 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 94476403 94476403 + Nonsense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ABCA4 24 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 94564377 94564377 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ADAMTS13 11093 hgsc.bcm.edu;ucsc.edu 37 9 136290647 136290647 + Splice_Site SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ASS1 445 broad.mit.edu;hgsc.bcm.edu 37 9 133333803 133333803 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c BBS1 582 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 66287216 66287216 + Silent SNP C C G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c BDP1 55814 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 70785431 70785431 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c BRP44 0 broad.mit.edu;ucsc.edu 37 1 167893736 167893736 + Nonsense_Mutation SNP C T T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c BTN1A1 696 hgsc.bcm.edu;ucsc.edu 37 6 26501821 26501822 + Frame_Shift_Ins INS - - T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C15orf33 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 49868999 49868999 + Missense_Mutation SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C1orf103 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 111494385 111494385 + Missense_Mutation SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C3orf37 56941 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 128998744 128998744 + Silent SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C3orf45 132228 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 50324295 50324295 + Splice_Site SNP T T A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C4orf37 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 98761954 98761954 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C6orf47 57827 broad.mit.edu;hgsc.bcm.edu 37 6 31627604 31627604 + Missense_Mutation SNP T T A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C9orf84 158401 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 114454520 114454520 + Missense_Mutation SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CAPN3 825 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 42695072 42695072 + Silent SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CD53 963 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 111437650 111437650 + Missense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CELF5 60680 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 3281241 3281241 + Silent SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CHD5 26038 broad.mit.edu;hgsc.bcm.edu 37 1 6212526 6212526 + Silent SNP G G A rs140463225 byfrequency TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CHML 1122 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 241797696 241797696 + Missense_Mutation SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c COBLL1 22837 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 165557144 165557144 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c COL11A1 1301 broad.mit.edu;hgsc.bcm.edu 37 1 103405991 103405991 + Splice_Site SNP C C A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c COL6A6 131873 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 130285927 130285927 + Missense_Mutation SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CTCFL 140690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 56090853 56090853 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c DIS3 22894 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 73335571 73335571 + Missense_Mutation SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c DMKN 93099 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 36003325 36003325 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c DNA2 1763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 70227941 70227941 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c DNAJC13 23317 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 132193851 132193851 + Silent SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ELAVL2 1993 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 23705049 23705049 + Silent SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ENTPD1 953 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 97607250 97607250 + Silent SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c EP300 2033 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 41572994 41572994 + Missense_Mutation SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c EYS 346007 broad.mit.edu;hgsc.bcm.edu 37 6 66112428 66112428 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c FAM123A 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 25743823 25743823 + Silent SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c FAM196A 642938 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 128974169 128974169 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c FBN3 84467 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 8194141 8194141 + Nonsense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c FZD1 8321 broad.mit.edu;hgsc.bcm.edu 37 7 90895797 90895797 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c GALNT13 114805 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 155099221 155099221 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c GPR98 84059 hgsc.bcm.edu;ucsc.edu 37 5 89969937 89969938 + Frame_Shift_Ins INS - - T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c HEXA 3073 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 72645420 72645420 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c HIP1 3092 broad.mit.edu;hgsc.bcm.edu 37 7 75168737 75168737 + Missense_Mutation SNP C C A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c HMCN1 83872 hgsc.bcm.edu;ucsc.edu 37 1 186023105 186023105 + Frame_Shift_Del DEL T T - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T T - T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c HSPD1 3329 hgsc.bcm.edu 37 2 198363397 198363397 + Splice_Site SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c HTR1E 3354 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 87725418 87725418 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c IFNGR1 3459 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 137528120 137528120 + Silent SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c IKZF3 22806 broad.mit.edu;hgsc.bcm.edu 37 17 37922736 37922736 + Silent SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c IKZF3 22806 broad.mit.edu;hgsc.bcm.edu 37 17 37922737 37922737 + Missense_Mutation SNP C C G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ISL1 3670 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 50685530 50685530 + Nonsense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c JAKMIP3 282973 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 133930691 133930691 + Missense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c JTB 10899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 153949705 153949705 + Silent SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c KDM5D 8284 broad.mit.edu;ucsc.edu 37 Y 21903350 21903350 + Missense_Mutation SNP C T T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c KIAA0240 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 42796273 42796273 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c KIAA1383 54627 hgsc.bcm.edu;ucsc.edu 37 1 232943660 232943660 + Frame_Shift_Del DEL T T - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c KLHL1 57626 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 70281831 70281831 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c LMNB1 4001 broad.mit.edu;ucsc.edu 37 5 126158526 126158526 + Silent SNP C T T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c LRP1 4035 hgsc.bcm.edu;ucsc.edu 37 12 57560827 57560833 + Frame_Shift_Del DEL GTGGTAA GTGGTAA - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 GTGGTAA GTGGTAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c LYPD3 27076 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 43967403 43967403 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c MAGI3 260425 hgsc.bcm.edu;ucsc.edu 37 1 114193718 114193718 + Frame_Shift_Del DEL A A - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c MCM5 4174 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 35815920 35815920 + Missense_Mutation SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c MED13 9969 hgsc.bcm.edu;ucsc.edu 37 17 60059957 60059957 + Frame_Shift_Del DEL T T - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c MKI67 4288 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 129913433 129913433 + Silent SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c MORC3 23515 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 37721695 37721695 + Silent SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NAA10 8260 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 153196257 153196257 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NARF 26502 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 80443460 80443460 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NFE2L1 4779 broad.mit.edu;ucsc.edu 37 17 46135813 46135813 + Missense_Mutation SNP C G G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NOTCH4 4855 hgsc.bcm.edu 37 6 32187443 32187443 + Missense_Mutation SNP C C A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NPTX1 4884 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 78445540 78445540 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NSD1 64324 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 176720945 176720945 + Silent SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c NUP160 23279 broad.mit.edu;hgsc.bcm.edu 37 11 47828687 47828687 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c OR1C1 26188 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 247921449 247921449 + Missense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ORC2 4999 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 201776015 201776015 + RNA SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PANK2 80025 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 3897581 3897581 + Missense_Mutation SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52696252 52696253 + Frame_Shift_Ins INS - - C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 - - - C - - Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PDCL2 132954 broad.mit.edu;hgsc.bcm.edu 37 4 56435977 56435977 + Silent SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c POLK 51426 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 74865216 74865216 + Missense_Mutation SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PPIP5K2 23262 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 102513641 102513641 + Missense_Mutation SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PPP2R2A 5520 broad.mit.edu;ucsc.edu 37 8 26217736 26217736 + Missense_Mutation SNP G T T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PRRC2A 7916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 31594808 31594808 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c PSMB8 5696 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 32808790 32808790 + Silent SNP T T A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RAB3GAP2 25782 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 220445640 220445640 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RBM39 9584 hgsc.bcm.edu;ucsc.edu 37 20 34309720 34309720 + Frame_Shift_Del DEL G G - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RIMKLB 57494 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 8904578 8904578 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RPGRIP1 57096 hgsc.bcm.edu;ucsc.edu 37 14 21796727 21796727 + Nonsense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RREB1 6239 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 7248780 7248780 + Missense_Mutation SNP C C G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RUSC2 9853 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 35547730 35547730 + Silent SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c RXRB 6257 broad.mit.edu;hgsc.bcm.edu 37 6 33163416 33163416 + Missense_Mutation SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SEC14L3 266629 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 30856107 30856107 + Silent SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SEC16B 89866 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 177906454 177906454 + Missense_Mutation SNP A A G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SECISBP2L 9728 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 49301485 49301485 + Missense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SHROOM3 57619 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 77661527 77661527 + Missense_Mutation SNP C C G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SKP2 6502 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 36177323 36177323 + Missense_Mutation SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SLITRK6 84189 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 86370298 86370298 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SMARCB1 6598 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 24143192 24143192 + Missense_Mutation SNP T T A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SPTA1 6708 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 158582749 158582749 + Missense_Mutation SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SRCAP 10847 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 30749422 30749422 + Silent SNP A A T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SRGAP1 57522 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 64377845 64377845 + Missense_Mutation SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c STK11IP 114790 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 220465991 220465991 + Silent SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SULT1E1 6783 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 70707775 70707775 + Silent SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SYNM 23336 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 99672128 99672128 + Missense_Mutation SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TACC2 10579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 123846868 123846868 + Missense_Mutation SNP T T C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TECRL 253017 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 65274994 65274994 + Missense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TECRL 253017 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 65274995 65274995 + Silent SNP T T A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TINAG 27283 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 54214608 54214608 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TIPRL 261726 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 168153162 168153162 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TM4SF19 116211 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 196051159 196051159 + Silent SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TRAF5 7188 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 211542827 211542827 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TRIP12 9320 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 230642131 230642131 + Nonsense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TSPAN11 441631 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 31136075 31136075 + Missense_Mutation SNP C C A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TUBB 203068 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 30688293 30688293 + Missense_Mutation SNP A A C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c TUBGCP3 10426 hgsc.bcm.edu;ucsc.edu 37 13 113176789 113176789 + Frame_Shift_Del DEL A A - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c UGGT1 56886 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128867214 128867214 + Missense_Mutation SNP G G A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c UGGT1 56886 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128867224 128867224 + Missense_Mutation SNP C C A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c VGLL2 245806 hgsc.bcm.edu;ucsc.edu 37 6 117589513 117589514 + Frame_Shift_Ins INS - - G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c VHL 7428 broad.mit.edu;ucsc.edu 37 3 10188215 10188215 + Missense_Mutation SNP A G G novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c VPS39 23339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 42480038 42480038 + Missense_Mutation SNP T T A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c XCR1 2829 broad.mit.edu;hgsc.bcm.edu 37 3 46063001 46063001 + Missense_Mutation SNP C C T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c XPOT 11260 broad.mit.edu;hgsc.bcm.edu 37 12 64828368 64828368 + Missense_Mutation SNP G G T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c YIF1B 90522 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 38798068 38798068 + Missense_Mutation SNP C C A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ZNF404 342908 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 44376785 44376785 + Frame_Shift_Del DEL T T - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ZNF764 92595 broad.mit.edu;ucsc.edu 37 16 30569111 30569111 + Missense_Mutation SNP A C C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ZYG11B 79699 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 53237222 53237222 + Missense_Mutation SNP G G C novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ABCA7 10347 broad.mit.edu 37 19 1056479 1056479 + Missense_Mutation SNP C A A novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c ACO1 48 broad.mit.edu 37 9 32427337 32427337 + Missense_Mutation SNP G A A rs189305274 by1000genomes TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c C1orf159 54991 broad.mit.edu 37 1 1019876 1019876 + Frame_Shift_Del DEL C - - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c CYP2F1 1572 broad.mit.edu 37 19 41627951 41627951 + Silent SNP C T T rs139489388 TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c LOC650368 650368 broad.mit.edu 37 11 3427759 3427759 + RNA SNP C T T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c MNX1 3110 broad.mit.edu 37 7 156798268 156798268 + Frame_Shift_Del DEL G - - novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c SPTBN5 51332 broad.mit.edu 37 15 42175214 42175214 + Silent SNP C T T novel TCGA-CJ-6030-01A-11D-1669-08 TCGA-CJ-6030-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx c904299c-09a8-4a4c-9378-2fee0ac4cd33 ac520dbf-14be-4783-a879-412bed97580c