Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ALS2CR12 130540 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 202172343 202172343 + Missense_Mutation SNP T T C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ASB4 51666 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 95157534 95157534 + Silent SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ATP2B1 490 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 90003742 90003742 + Missense_Mutation SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ATP6V1D 51382 hgsc.bcm.edu;ucsc.edu 37 14 67819728 67819728 + Frame_Shift_Del DEL T T - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ATXN7 6314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 63981575 63981575 + Missense_Mutation SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C11orf42 160298 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 6231300 6231300 + Missense_Mutation SNP G G A rs148934108 TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C11orf42 160298 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 6231320 6231320 + Nonsense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C11orf42 160298 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 6231744 6231744 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C19orf39 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 11486488 11486489 + Frame_Shift_Del DEL TC TC - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 TC TC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C1R 715 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 7242701 7242701 + Missense_Mutation SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C1S 716 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 7177889 7177889 + Silent SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C4orf48 401115 broad.mit.edu;ucsc.edu 37 4 2045589 2045589 + Missense_Mutation SNP C T T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C6orf103 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 146975333 146975333 + Silent SNP C C G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C7orf50 84310 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 1037413 1037413 + Missense_Mutation SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CD40LG 959 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 135730560 135730560 + Silent SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CHPT1 56994 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 102120124 102120124 + Missense_Mutation SNP T T A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CNGB1 1258 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 57991272 57991272 + Missense_Mutation SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e COL27A1 85301 hgsc.bcm.edu;ucsc.edu 37 9 117053135 117053135 + Missense_Mutation SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CRIPAK 285464 hgsc.bcm.edu 37 4 1388622 1388623 + Frame_Shift_Ins INS - - CA novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CTNNA3 29119 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 68940123 68940123 + Silent SNP G G A rs146754105 TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CXorf30 645090 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 36324941 36324941 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DCUN1D1 54165 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 182683307 182683336 + Frame_Shift_Del DEL TCACAAGCAAGCACTCACCTTTGTATCTAT TCACAAGCAAGCACTCACCTTTGTATCTAT - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 TCACAAGCAAGCACTCACCTTTGTATCTAT TCACAAGCAAGCACTCACCTTTGTATCTAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DHX37 57647 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 125435351 125435351 + Splice_Site SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DNAH17 8632 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 76450661 76450661 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DNAH6 1768 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 84880607 84880607 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DOCK5 80005 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 25189787 25189787 + Missense_Mutation SNP A A T rs185726789 by1000genomes;alternate_allele TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DPP10 57628 broad.mit.edu;hgsc.bcm.edu 37 2 116510751 116510751 + Nonsense_Mutation SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e DPP9 91039 broad.mit.edu;ucsc.edu 37 19 4719861 4719861 + Splice_Site SNP A T T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e EGF 1950 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 110862256 110862256 + Missense_Mutation SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e EIF3L 51386 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 38270461 38270461 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ERBB4 2066 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 212426720 212426720 + Missense_Mutation SNP T T A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ERBB4 2066 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 212426721 212426721 + Silent SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ERCC6 2074 broad.mit.edu;hgsc.bcm.edu 37 10 50732744 50732744 + Missense_Mutation SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FAM129B 64855 broad.mit.edu;hgsc.bcm.edu 37 9 130287413 130287413 + Silent SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FAM83B 222584 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 54806759 54806759 + Missense_Mutation SNP G G A rs146473058 TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FBXO4 26272 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 41927219 41927219 + Silent SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FMN2 56776 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 240492737 240492737 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FMO5 2330 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 146672930 146672930 + Silent SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FPGT-TNNI3K 100526835 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 75009648 75009648 + Missense_Mutation SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e FRK 2444 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 116288847 116288847 + Missense_Mutation SNP T T A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e GAS7 8522 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 9873005 9873005 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e GP1BA 2811 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 4836600 4836600 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e GPR160 26996 broad.mit.edu;hgsc.bcm.edu 37 3 169802072 169802072 + Silent SNP T T C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e HEXA 3073 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 72640389 72640389 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e HSPA9 3313 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 137895767 137895767 + Missense_Mutation SNP A A G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e IQCE 23288 broad.mit.edu;hgsc.bcm.edu 37 7 2629606 2629606 + Silent SNP C C G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ISPD 729920 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 16445697 16445697 + Missense_Mutation SNP T T C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e KAZ 0 broad.mit.edu;hgsc.bcm.edu 37 1 15428039 15428039 + Silent SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e KCNAB2 8514 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 6157369 6157369 + Frame_Shift_Del DEL G G - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e KCTD20 222658 broad.mit.edu;ucsc.edu 37 6 36442785 36442785 + Missense_Mutation SNP G A A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e KIF1C 10749 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 4923903 4923903 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e KRTAP7-1 337878 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 32202006 32202006 + Nonsense_Mutation SNP G G C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e LPHN2 23266 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 82456186 82456186 + Missense_Mutation SNP A A C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MAB21L2 10586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 151504561 151504561 + Missense_Mutation SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MAPKAPK2 9261 hgsc.bcm.edu 37 1 206903392 206903393 + Frame_Shift_Ins INS - - C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MAST4 375449 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 66459741 66459741 + Silent SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MICALCL 84953 broad.mit.edu;hgsc.bcm.edu 37 11 12316279 12316279 + Missense_Mutation SNP A A C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MKL2 57496 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 14334311 14334311 + Missense_Mutation SNP A A T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MTDH 92140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 98703400 98703400 + Silent SNP A A C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MTMR3 8897 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 30418102 30418102 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MTOR 2475 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 11184573 11184573 + Missense_Mutation SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G G T G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MURC 347273 broad.mit.edu;hgsc.bcm.edu 37 9 103348313 103348313 + Silent SNP A A C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MYO18A 399687 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27417116 27417116 + Missense_Mutation SNP G G C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e NASP 4678 hgsc.bcm.edu 37 1 46073373 46073373 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e NRIP1 8204 hgsc.bcm.edu 37 21 16338707 16338707 + Missense_Mutation SNP T T A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e OR2A12 346525 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 143792898 143792898 + Missense_Mutation SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52584643 52584643 + Frame_Shift_Del DEL A A - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e PDILT 204474 hgsc.bcm.edu;ucsc.edu 37 16 20384428 20384428 + Missense_Mutation SNP C C T rs141043720 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e PILRA 29992 broad.mit.edu;ucsc.edu 37 7 99987688 99987688 + Missense_Mutation SNP T G G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e PLA2G4E 123745 hgsc.bcm.edu 37 15 42302340 42302341 + Frame_Shift_Ins INS - - G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e RAB43 339122 broad.mit.edu;hgsc.bcm.edu 37 3 128813995 128813995 + Silent SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e RBFOX1 54715 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 7645620 7645620 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SBF2 81846 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 9868520 9868520 + Missense_Mutation SNP T T G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SBNO1 55206 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 123812074 123812074 + Missense_Mutation SNP A A G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SECISBP2L 9728 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 49301479 49301479 + Missense_Mutation SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C C A C C Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SENP5 205564 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 196650309 196650309 + Missense_Mutation SNP C C G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SEPP1 6414 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 42807034 42807035 + Frame_Shift_Del DEL AA AA - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 AA AA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SHD 56961 broad.mit.edu;hgsc.bcm.edu 37 19 4280225 4280225 + Silent SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SLC37A2 219855 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 124955896 124955896 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SLC5A11 115584 broad.mit.edu;hgsc.bcm.edu 37 16 24921753 24921753 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SNW1 22938 hgsc.bcm.edu;ucsc.edu 37 14 78184785 78184797 + Frame_Shift_Del DEL CTCTGGGCCATAT CTCTGGGCCATAT - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 CTCTGGGCCATAT CTCTGGGCCATAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SRCAP 10847 broad.mit.edu;hgsc.bcm.edu 37 16 30734026 30734026 + Silent SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SRRM4 84530 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 119552153 119552153 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SSPO 23145 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 149480310 149480310 + Silent SNP A A C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SYTL5 94122 broad.mit.edu;hgsc.bcm.edu 37 X 37935825 37935825 + Frame_Shift_Del DEL T T - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TCEA3 6920 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 23743879 23743879 + Silent SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TNKS1BP1 85456 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 57076422 57076422 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TPR 7175 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 186303510 186303510 + Missense_Mutation SNP G G C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TRIM22 10346 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 5727831 5727831 + Missense_Mutation SNP T T C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TSPYL2 64061 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 53115408 53115408 + Missense_Mutation SNP G G T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TSSC1 7260 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 3217939 3217939 + Missense_Mutation SNP T T C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e TSSC1 7260 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 3217940 3217940 + Nonsense_Mutation SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e USP25 29761 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 17205757 17205757 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e VHL 7428 hgsc.bcm.edu 37 3 10183797 10183797 + Missense_Mutation SNP T T C rs5030807 bycluster TCGA-CJ-5679-01A-11W-1584-10 TCGA-CJ-5679-11A-01W-1585-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq de904324-2c23-4a2c-b5bf-56e2e6f616ef 20ed414c-6f1f-4d6a-a731-e28d3d45efc3 WDR11 55717 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 122624668 122624668 + Missense_Mutation SNP G G C rs145467317 alternate_allele TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e WDR69 164781 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 228754578 228754578 + Missense_Mutation SNP T T A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e WDR78 79819 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 67301400 67301400 + Missense_Mutation SNP C C T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e XIRP2 129446 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 168103812 168103812 + Missense_Mutation SNP G G C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e XPNPEP2 7512 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 128886138 128886138 + Missense_Mutation SNP C C A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ZNF226 7769 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 44680985 44680985 + Missense_Mutation SNP G G C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ZNF610 162963 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 52869427 52869427 + Missense_Mutation SNP G G A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e ZP2 7783 hgsc.bcm.edu 37 16 21208874 21208875 + Frame_Shift_Ins INS - - C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e C10orf53 282966 broad.mit.edu 37 10 50887761 50887761 + Frame_Shift_Del DEL G - - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e CCDC144A 9720 broad.mit.edu 37 17 16596346 16596346 + Missense_Mutation SNP C T T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e LOC388692 388692 broad.mit.edu 37 1 149280301 149280302 + RNA INS - A A rs11386501 bycluster;byfrequency TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e LOC440354 440354 broad.mit.edu 37 16 30278845 30278845 + RNA DEL A - - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MICAL1 64780 broad.mit.edu 37 6 109771288 109771288 + Missense_Mutation SNP G T T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MST1P2 11209 broad.mit.edu 37 1 16976585 16976585 + RNA SNP C T T rs11545933 byfrequency TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e MUC4 4585 broad.mit.edu 37 3 195506315 195506315 + Missense_Mutation SNP T C C rs62282465 byfrequency TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e NBPF9 400818 broad.mit.edu 37 1 144615246 144615247 + Splice_Site INS - AG AG novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SLC30A5 64924 broad.mit.edu 37 5 68414420 68414420 + Missense_Mutation SNP A G G novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SPRY2 10253 broad.mit.edu 37 13 80911818 80911818 + Missense_Mutation SNP C T T novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SREBF2 6721 broad.mit.edu 37 22 42276853 42276853 + Missense_Mutation SNP G A A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e SULT1A1 6817 broad.mit.edu 37 16 28620121 28620121 + Missense_Mutation SNP G A A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e Unknown 0 broad.mit.edu 37 10 29080850 29080851 + RNA DEL AA - - rs144810223 by1000genomes TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 AA AA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e Unknown 0 broad.mit.edu 37 12 92018 92018 + Missense_Mutation SNP T C C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e Unknown 0 broad.mit.edu 37 17 21731234 21731234 + Missense_Mutation SNP A C C novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e Unknown 0 broad.mit.edu 37 17 34234138 34234138 + RNA SNP G A A novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e Unknown 0 broad.mit.edu 37 5 170733147 170733147 + RNA DEL A - - novel TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e Unknown 0 broad.mit.edu 37 7 141969146 141969147 + RNA DEL TT - - rs10538162 TCGA-CJ-5679-01A-11D-1534-10 TCGA-CJ-5679-11A-01D-1535-10 TT TT . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 84120a7c-4be0-4025-a95a-f78bfb58d28f 4c1ae2ec-1dbf-4c5a-88f2-9995df35736e