Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS18 170692 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 77325284 77325284 + Missense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ADAMTS2 9509 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 178555036 178555036 + Silent SNP G G A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ADCY6 112 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49167327 49167327 + Frame_Shift_Del DEL T T - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ANKRD7 56311 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 117876197 117876197 + Nonsense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c BCORL1 63035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 129147106 129147106 + Missense_Mutation SNP G G T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c BMP3 651 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 81967318 81967318 + Missense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CALCOCO1 57658 broad.mit.edu;ucsc.edu 37 12 54107576 54107576 + Missense_Mutation SNP G C C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CCDC108 255101 broad.mit.edu;ucsc.edu 37 2 219886632 219886632 + Silent SNP G C C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CELF4 56853 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 34833813 34833813 + Silent SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CERCAM 51148 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 131193563 131193563 + Missense_Mutation SNP A A T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CHD9 80205 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 53340243 53340243 + Silent SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CHKB 1120 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 51018844 51018844 + Missense_Mutation SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CHRNA9 55584 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 40356027 40356027 + Silent SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CKAP4 10970 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 106633704 106633704 + Missense_Mutation SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CLDN6 9074 broad.mit.edu;hgsc.bcm.edu 37 16 3065984 3065984 + Silent SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CRB1 23418 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 197446956 197446956 + Nonsense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CSMD3 114788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 113529433 113529433 + Missense_Mutation SNP C C T rs138068999 TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CTNND2 1501 hgsc.bcm.edu;ucsc.edu 37 5 10988302 10988303 + Frame_Shift_Del DEL TG TG - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 TG TG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CXADR 1525 hgsc.bcm.edu;ucsc.edu 37 21 18931362 18931363 + Frame_Shift_Del DEL TG TG - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 TG TG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c CYFIP2 26999 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 156753229 156753229 + Missense_Mutation SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c DPY19L4 286148 broad.mit.edu;ucsc.edu 37 8 95777480 95777480 + Missense_Mutation SNP G T T rs144794373 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c DPY19L4 286148 broad.mit.edu;ucsc.edu 37 8 95777481 95777481 + Missense_Mutation SNP C A A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c EXOSC5 56915 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 41895707 41895707 + Missense_Mutation SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c FAM150B 285016 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 283163 283163 + Missense_Mutation SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c FTL 2512 broad.mit.edu;hgsc.bcm.edu 37 19 49468840 49468840 + Missense_Mutation SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c GABRE 2564 hgsc.bcm.edu;ucsc.edu 37 X 151128394 151128395 + Frame_Shift_Ins INS - - T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c GBP2 2634 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 89582840 89582840 + Missense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c GCC1 79571 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 127222351 127222351 + Missense_Mutation SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c HSF2BP 11077 hgsc.bcm.edu;ucsc.edu 37 21 45053272 45053272 + Nonsense_Mutation SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c HSPG2 3339 hgsc.bcm.edu 37 1 22216602 22216602 + Missense_Mutation SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c HSPG2 3339 hgsc.bcm.edu;ucsc.edu 37 1 22216599 22216600 + Frame_Shift_Ins INS - - C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c IL6ST 3572 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 55256363 55256363 + Silent SNP G G T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c INPP5B 3633 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 38353034 38353034 + Missense_Mutation SNP T T G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ITGAD 3681 broad.mit.edu;ucsc.edu 37 16 31424171 31424171 + Missense_Mutation SNP T G G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c KIAA1310 0 broad.mit.edu;hgsc.bcm.edu 37 2 97267383 97267383 + Silent SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c KRTAP22-1 337979 broad.mit.edu;ucsc.edu 37 21 31973474 31973474 + Missense_Mutation SNP G T T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c LOC342346 0 broad.mit.edu;ucsc.edu 37 16 4606857 4606857 + Missense_Mutation SNP C A A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c MTMR3 8897 hgsc.bcm.edu;ucsc.edu 37 22 30415808 30415816 + In_Frame_Del DEL CCCTCTCTT CCCTCTCTT - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 CCCTCTCTT CCCTCTCTT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c NCOR1 9611 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 16021256 16021256 + Silent SNP A A G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c NOC2L 26155 broad.mit.edu;hgsc.bcm.edu 37 1 888619 888619 + Missense_Mutation SNP G G T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c NOL6 65083 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 33464888 33464888 + Missense_Mutation SNP T T G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c OPRD1 4985 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 29185683 29185683 + Missense_Mutation SNP G G A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c OPRM1 4988 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 154412361 154412361 + Silent SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c OR6T1 219874 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 123814182 123814182 + Missense_Mutation SNP G G T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52651383 52651383 + Frame_Shift_Del DEL A A - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PFDN4 5203 broad.mit.edu;ucsc.edu 37 20 52835595 52835595 + Missense_Mutation SNP G T T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PHTF1 10745 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 114267480 114267480 + Missense_Mutation SNP C C G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PLAGL2 5326 broad.mit.edu;hgsc.bcm.edu 37 20 30784297 30784297 + Silent SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PLCH2 9651 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 2435907 2435907 + Missense_Mutation SNP G G A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PRPS1 5631 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 106885678 106885678 + Missense_Mutation SNP G G A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c RBM11 54033 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 15599585 15599585 + Nonsense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c RNF220 55182 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 44878049 44878049 + Missense_Mutation SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c RNF31 55072 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 24617487 24617487 + Silent SNP A A G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c RPS11 6205 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 50001200 50001200 + Missense_Mutation SNP A A G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SERAC1 84947 broad.mit.edu;ucsc.edu 37 6 158569914 158569914 + Missense_Mutation SNP A G G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SH3TC1 54436 hgsc.bcm.edu;ucsc.edu 37 4 8218768 8218768 + Frame_Shift_Del DEL G G - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SLC27A5 10998 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 59010218 59010218 + Missense_Mutation SNP C C G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SLC9A5 6553 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 67304703 67304703 + Nonsense_Mutation SNP G G T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SLC9A5 6553 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 67304704 67304704 + Missense_Mutation SNP A A G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SLCO1A2 6579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 21471822 21471822 + Silent SNP G G T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SLCO1C1 53919 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 20893281 20893281 + Missense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SMG5 23381 broad.mit.edu;hgsc.bcm.edu 37 1 156243168 156243168 + Silent SNP T T A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c STAT3 6774 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 40485988 40485988 + Missense_Mutation SNP A A T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c STXBP5L 9515 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 121137382 121137382 + Missense_Mutation SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c TIA1 7072 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 70441538 70441538 + Missense_Mutation SNP C C G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c TRPM7 54822 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 50867287 50867287 + Missense_Mutation SNP A A G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179634827 179634827 + Silent SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c UBR4 23352 broad.mit.edu;ucsc.edu 37 1 19446815 19446815 + Missense_Mutation SNP T C C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c UGGT1 56886 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128878020 128878020 + Nonsense_Mutation SNP G G A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c USP29 57663 hgsc.bcm.edu;ucsc.edu 37 19 57642738 57642738 + Silent SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c USP29 57663 hgsc.bcm.edu;ucsc.edu 37 19 57642739 57642739 + Missense_Mutation SNP G G T rs138755535 byfrequency;alternate_allele TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c USP29 57663 hgsc.bcm.edu;ucsc.edu 37 19 57642746 57642746 + Silent SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10191570 10191570 + Missense_Mutation SNP T T C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T T C T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZFP106 64397 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 42743699 42743699 + Silent SNP A A G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZNF318 24149 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 43308012 43308012 + Missense_Mutation SNP T T A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZNF346 23567 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 176471492 176471492 + Missense_Mutation SNP G G A rs139233067 TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZNF423 23090 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 49670777 49670777 + Silent SNP C C T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZNF555 148254 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 2853429 2853429 + Missense_Mutation SNP C C A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZNF625 90589 hgsc.bcm.edu 37 19 12256227 12256228 + Frame_Shift_Del DEL TG TG - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 TG TG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZNF790 388536 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 37310789 37310789 + Missense_Mutation SNP G G C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c ZSCAN29 146050 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 43661240 43661240 + Missense_Mutation SNP T T A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c C12orf53 0 broad.mit.edu 37 12 6804739 6804739 + Silent SNP C T T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c C14orf19 0 broad.mit.edu 37 14 35409694 35409694 + RNA DEL A - - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c FIGF 2277 broad.mit.edu 37 X 15402300 15402301 + Translation_Start_Site INS - CTCATG CTCATG novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c FOXO3 2309 broad.mit.edu 37 6 108985392 108985392 + Silent SNP A G G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c IFRD1 3475 broad.mit.edu 37 7 112090771 112090771 + Frame_Shift_Del DEL C - - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c MRP63 78988 broad.mit.edu 37 13 21751241 21751241 + Missense_Mutation SNP C G G novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c MUC4 4585 broad.mit.edu 37 3 195506460 195506460 + Missense_Mutation SNP G C C rs113130007 TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c NBPF9 400818 broad.mit.edu 37 1 144220807 144220807 + Missense_Mutation SNP A C C novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c NEFM 4741 broad.mit.edu 37 8 24775663 24775663 + Silent SNP G A A novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c PARS2 25973 broad.mit.edu 37 1 55224781 55224781 + Missense_Mutation SNP G T T novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c SLC7A5P2 387254 broad.mit.edu 37 16 21531066 21531066 + Frame_Shift_Del DEL G - - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c Unknown 0 broad.mit.edu 37 3 181723083 181723083 + RNA DEL A - - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c WDR81 124997 broad.mit.edu 37 17 1636960 1636960 + Frame_Shift_Del DEL C - - novel TCGA-B0-5705-01A-11D-1534-10 TCGA-B0-5705-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d3095df5-5466-4b98-9f6d-f8ae8916ccca 2dd91fc7-6495-4981-97ca-d695f190215c