Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID TAS1R3 83756 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 1268041 1268041 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 QSER1 79832 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 32954825 32954825 + Missense_Mutation SNP A A T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 DENND4B 9909 hgsc.bcm.edu 37 1 153907297 153907297 + Silent SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 BCAN 63827 hgsc.bcm.edu 37 1 156616757 156616758 + In_Frame_Ins INS - - GGGAGG novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ATP13A2 23400 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 17331882 17331882 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SPG11 80208 hgsc.bcm.edu;ucsc.edu 37 15 44881589 44881589 + Silent SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 LILRA1 11024 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 19 55107718 55107718 + Silent SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 C2orf49 79074 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 2 105956200 105956200 + Missense_Mutation SNP C C A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 RBX1 9978 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 41368482 41368482 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CCNL1 57018 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 156866283 156866283 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 VILL 50853 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 38040486 38040486 + Missense_Mutation SNP G G T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MYRIP 25924 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 40211564 40211564 + Missense_Mutation SNP C C T rs142520074 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SYTL3 94120 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 159173001 159173001 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SYTL3 94120 hgsc.bcm.edu;ucsc.edu 37 6 159173011 159173011 + Silent SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 TMEM31 203562 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 102967204 102967204 + Missense_Mutation SNP G G C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 BPTF 2186 broad.mit.edu;hgsc.bcm.edu 37 17 65909291 65909291 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 DCUN1D4 23142 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 4 52779712 52779712 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PCDHA8 56140 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 5 140222358 140222358 + Silent SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SPAM1 6677 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 123594255 123594255 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 LRRC6 23639 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 133673863 133673863 + Missense_Mutation SNP A A T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 HIPK1 204851 broad.mit.edu 37 1 114483676 114483676 + Missense_Mutation SNP A A C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SYT9 143425 broad.mit.edu 37 11 7439309 7439309 + Silent SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CAPRIN1 4076 broad.mit.edu 37 11 34118204 34118204 + Frame_Shift_Del DEL T T - novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CEP290 80184 broad.mit.edu 37 12 88443060 88443060 + Frame_Shift_Del DEL T T - novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 BRAP 8315 broad.mit.edu;mdanderson.org;bcgsc.ca 37 12 112082340 112082340 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 WDR66 144406 broad.mit.edu 37 12 122361543 122361543 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ASB7 140460 broad.mit.edu 37 15 101170058 101170058 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PRSS36 146547 broad.mit.edu 37 16 31154780 31154780 + Missense_Mutation SNP G G T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 KAT7 11143 broad.mit.edu;ucsc.edu 37 17 47893250 47893250 + Missense_Mutation SNP C C A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 GPS1 2873 broad.mit.edu 37 17 80010268 80010268 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ASXL3 80816 broad.mit.edu 37 18 31325884 31325884 + Silent SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 EPG5 57724 broad.mit.edu 37 18 43534970 43534970 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 NDUFS1 4719 broad.mit.edu 37 2 206988916 206988916 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SLC32A1 140679 broad.mit.edu 37 20 37356927 37356927 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 USP16 10600 broad.mit.edu 37 21 30409627 30409627 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SCN5A 6331 broad.mit.edu 37 3 38592026 38592026 + Missense_Mutation SNP C C A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CRIPAK 285464 broad.mit.edu 37 4 1388673 1388673 + Frame_Shift_Del DEL C C - novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 DNAH5 1767 broad.mit.edu;mdanderson.org;bcgsc.ca 37 5 13708238 13708238 + Nonsense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 RANBP9 10048 broad.mit.edu 37 6 13638047 13638047 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 COL12A1 1303 broad.mit.edu;mdanderson.org 37 6 75843574 75843574 + Silent SNP C C A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ISPD 729920 broad.mit.edu 37 7 16341081 16341081 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 GTF2IRD1 9569 broad.mit.edu 37 7 74016919 74016919 + Splice_Site DEL A A - rs56797334 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ZAN 7455 broad.mit.edu;mdanderson.org;bcgsc.ca 37 7 100390083 100390083 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 NCAPG2 54892 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 158485614 158485614 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 WWP1 11059 broad.mit.edu 37 8 87414376 87414376 + Frame_Shift_Del DEL G G - novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 AGO2 27161 broad.mit.edu 37 8 141551316 141551316 + Missense_Mutation SNP G G T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 FAM154A 158297 broad.mit.edu;mdanderson.org;bcgsc.ca 37 9 18941779 18941779 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ENTPD2 954 broad.mit.edu 37 9 139946006 139946006 + Silent SNP G G T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 NHSL2 340527 broad.mit.edu 37 X 71360546 71360546 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ATP2B4 493 broad.mit.edu 37 1 203693038 203693039 + Frame_Shift_Ins INS - - T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MYRF 745 broad.mit.edu 37 11 61537812 61537813 + Frame_Shift_Ins INS - - C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 FRMD8 83786 broad.mit.edu 37 11 65172422 65172423 + Frame_Shift_Ins INS - - C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MLL2 8085 broad.mit.edu 37 12 49415604 49415605 + Frame_Shift_Ins INS - - G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CALML4 91860 broad.mit.edu 37 15 68489865 68489866 + In_Frame_Ins INS - - CAT novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SEPT9 10801 broad.mit.edu 37 17 75398360 75398361 + Frame_Shift_Ins INS - - G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 APP 351 broad.mit.edu 37 21 27372385 27372386 + Frame_Shift_Ins INS - - C rs141526793 bycluster;by1000genomes TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SEC14L3 266629 broad.mit.edu 37 22 30857663 30857664 + Frame_Shift_Ins INS - - C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 THBS4 7060 broad.mit.edu 37 5 79331430 79331431 + Frame_Shift_Ins INS - - C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 KIF1A 547 ucsc.edu 37 2 241697840 241697840 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 LECT1 11061 ucsc.edu 37 13 53313218 53313218 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 METTL13 51603 ucsc.edu 37 1 171753605 171753605 + Silent SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 TMX3 54495 ucsc.edu 37 18 66365223 66365223 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ADAM21 8747 mdanderson.org 37 14 70924335 70924335 + Missense_Mutation SNP C C T rs199920662 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ANKRD30B 374860 mdanderson.org 37 18 14780019 14780019 + Missense_Mutation SNP G G T rs72873710 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ANKRD30BL 554226 mdanderson.org 37 2 132919099 132919099 + RNA SNP C C T rs199974298 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ASTE1 28990 mdanderson.org;bcgsc.ca 37 3 130743262 130743262 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CDC27 996 mdanderson.org 37 17 45214690 45214690 + Missense_Mutation SNP G G A rs74390782 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 COL5A3 50509 mdanderson.org;bcgsc.ca 37 19 10078060 10078060 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 DDX11 1663 mdanderson.org 37 12 31242999 31242999 + Missense_Mutation SNP G G A rs74617951 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 FADS6 283985 mdanderson.org 37 17 72889685 72889685 + Silent SNP G G A rs2683274 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 FRG1B 284802 mdanderson.org 37 20 29625877 29625877 + RNA SNP G G A rs7266938 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 GGH 8836 mdanderson.org 37 8 63951312 63951312 + Missense_Mutation SNP A A G rs1800909 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 HLA-C 3107 mdanderson.org 37 6 31238866 31238866 + Missense_Mutation SNP C C G rs17413678 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 IQSEC3 440073 mdanderson.org 37 12 248071 248071 + Missense_Mutation SNP G G C rs77474006 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 KRT6B 3854 mdanderson.org 37 12 52843581 52843581 + Silent SNP A A G rs382894 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 KRTAP10-6 386674 mdanderson.org 37 21 46011987 46011987 + Missense_Mutation SNP A A G rs201334923 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 L3HYPDH 112849 mdanderson.org 37 14 59950690 59950690 + Silent SNP A A C rs2296842 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MAMDC4 158056 mdanderson.org 37 9 139752899 139752899 + Missense_Mutation SNP T T G rs2275156 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MIR663B 100313824 mdanderson.org 37 2 133014602 133014602 + RNA SNP G G C rs75245503 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MIR663B 100313824 mdanderson.org 37 2 133014612 133014612 + RNA SNP A A C rs74853538 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MTMR3 8897 mdanderson.org 37 22 30419455 30419455 + Silent SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MUC4 4585 mdanderson.org 37 3 195505801 195505801 + Missense_Mutation SNP G G A rs200432267 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 MUC4 4585 mdanderson.org 37 3 195507399 195507399 + Silent SNP C C T rs71187731 alternate_allele TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 OR5A1 219982 mdanderson.org 37 11 59211421 59211421 + Silent SNP C C T rs17591107 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PABPC3 5042 mdanderson.org 37 13 25671742 25671742 + Missense_Mutation SNP G G A rs140135080 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PABPC3 5042 mdanderson.org 37 13 25671759 25671759 + Missense_Mutation SNP C C T rs115121649 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PI4KAP2 375133 mdanderson.org 37 22 21829555 21829555 + RNA SNP T T G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 POTEC 388468 mdanderson.org 37 18 14542888 14542888 + Silent SNP A A G rs8040506 bycluster TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PRB4 5545 mdanderson.org 37 12 11461742 11461742 + Missense_Mutation SNP C C T novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PRIMA1 145270 mdanderson.org 37 14 94245649 94245649 + Silent SNP A A G rs4905087 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PRIMA1 145270 mdanderson.org 37 14 94245652 94245652 + Silent SNP C C T rs4900195 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SYCE1L 100130958 mdanderson.org 37 16 77246517 77246517 + Missense_Mutation SNP C C A rs62049594 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SYT8 90019 mdanderson.org 37 11 1858572 1858572 + Missense_Mutation SNP C C T rs2292474 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 TPSAB1 7177 mdanderson.org 37 16 1291160 1291160 + Missense_Mutation SNP G G T rs141519544 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 TPSAB1 7177 mdanderson.org 37 16 1291175 1291175 + Missense_Mutation SNP G G A rs146223687 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 TPSAB1 7177 mdanderson.org 37 16 1291178 1291178 + Missense_Mutation SNP T T C rs112944038 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 TPSAB1 7177 mdanderson.org 37 16 1291182 1291182 + Silent SNP C C T rs112531166 TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 WDR18 57418 mdanderson.org 37 19 984554 984554 + Silent SNP C C G rs4806884 byfrequency TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 SYT11 23208 bcgsc.ca 37 1 155837927 155837927 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 ADD3 120 bcgsc.ca 37 10 111890182 111890182 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PIGS 94005 bcgsc.ca 37 17 26882056 26882056 + Missense_Mutation SNP G G A novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 LRRC37B 114659 bcgsc.ca 37 17 30348140 30348140 + Missense_Mutation SNP C C G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 EIF5B 9669 bcgsc.ca 37 2 99995848 99995848 + Missense_Mutation SNP T T C novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 PEX1 5189 bcgsc.ca 37 7 92116845 92116845 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 CLCN5 1184 bcgsc.ca 37 X 49834549 49834549 + Missense_Mutation SNP A A G novel TCGA-KO-8407-01A-11D-2310-10 TCGA-KO-8407-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3 64f696a6-58b2-40a8-b848-fd775cd52529 60f94151-bbc5-4bea-a081-b0247bdbabb3