Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID HPS1 3257 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 10 100177455 100177455 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COX15 1355 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 101483798 101483798 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CALHM1 255022 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 105215188 105215188 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR37 22884 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 10 1175232 1175232 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BTBD16 118663 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 10 124057337 124057337 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLEKHA1 59338 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 124172505 124172505 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOCK1 1793 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 10 129216676 129216676 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MKI67 4288 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 129901498 129901498 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KNDC1 85442 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 10 134996849 134996849 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RASSF4 83937 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 10 45485141 45485141 + Silent SNP C C T rs192302639 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C10orf71 118461 hgsc.bcm.edu;mdanderson.org 37 10 50534403 50534403 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GDI2 2665 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 5827121 5827121 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IL2RA 3559 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 10 6063568 6063568 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DDX50 79009 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 10 70695777 70695777 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA1274 27143 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 72324139 72324139 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHST3 9469 hgsc.bcm.edu;mdanderson.org 37 10 73768163 73768163 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSPAN14 81619 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 82269147 82269147 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PANK1 53354 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 10 91371798 91371798 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYOF 26509 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 10 95168570 95168570 + Silent SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 VCAM1 7412 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 101186203 101186203 + Missense_Mutation SNP C C T rs142501320 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CORT 1325 hgsc.bcm.edu;ucsc.edu 37 1 10510334 10510334 + Silent SNP C C T rs182159138 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CASZ1 54897 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 10713846 10713846 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA1324 57535 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 109735386 109735386 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DYNC2H1 79659 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 102987417 102987417 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATM 472 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 108201014 108201014 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PIH1D2 120379 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 111938616 111938616 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TTC12 54970 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 113187003 113187003 + Missense_Mutation SNP T T A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MFRP 83552 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 119212383 119212383 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MUC5B 727897 hgsc.bcm.edu 37 11 1253980 1253980 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SRPR 6734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 126135007 126135007 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNJ1 3758 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 128709264 128709264 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPTY2D1 144108 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 18636542 18636542 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZDHHC13 54503 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 19170818 19170818 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ABTB2 25841 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 11 34192538 34192538 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANO9 338440 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 11 428582 428582 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PDE4DIP 9659 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 144879218 144879218 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRIM68 55128 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 4624492 4624492 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LRP4 4038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 46911059 46911059 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C1orf51 148523 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 150259023 150259023 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RPRD2 23248 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 150445515 150445515 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SELENBP1 8991 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 151339349 151339349 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 S100A4 6275 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 153516294 153516294 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 YY1AP1 55249 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 155629537 155629537 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARHGEF2 9181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 155921539 155921539 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SH2D2A 9047 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 156785800 156785800 + Missense_Mutation SNP C C T rs146718843 byfrequency;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 INSRR 3645 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 156814312 156814312 + Silent SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IGSF9 57549 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 159898623 159898623 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM109 79073 hgsc.bcm.edu;mdanderson.org 37 11 60689599 60689599 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 VPS37C 55048 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 60899839 60899839 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPOX 5498 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 161139815 161139815 + Splice_Site SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DAGLA 747 hgsc.bcm.edu 37 11 61511437 61511437 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 INCENP 3619 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 61906227 61906227 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AHNAK 79026 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 11 62286931 62286931 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SART1 9092 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 65744159 65744159 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PACS1 55690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 65978707 65978707 + Missense_Mutation SNP G G A rs142653069 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCHS1 8642 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 6650025 6650025 + Missense_Mutation SNP G G A rs146184962 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DUSP27 92235 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 167088687 167088687 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PITPNM1 9600 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 67261522 67261522 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBX19 9095 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 168282043 168282043 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARAP1 116985 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 72404807 72404807 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UCP2 7351 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 73689005 73689005 + Missense_Mutation SNP C C T rs145061662 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PADI4 23569 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 17664602 17664602 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NLRP10 338322 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 7982431 7982431 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 QSOX1 5768 broad.mit.edu;hgsc.bcm.edu 37 1 180135639 180135639 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RGSL1 353299 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 182509444 182509444 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPR 7175 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 186289518 186289518 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHORDC1 26973 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 11 89935620 89935620 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAT3 120114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 92086239 92086239 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PIWIL4 143689 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 11 94353042 94353042 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GABRD 2563 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 1956478 1956478 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SBF2 81846 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 9802030 9802030 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMCO4 255104 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 20067419 20067419 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACNA1S 779 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 201029943 201029943 + Missense_Mutation SNP C C T rs1800559 bycluster TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACNA1S 779 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 1 201060823 201060823 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CNTN2 6900 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 205041226 205041226 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GNPTAB 79158 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 102164267 102164267 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GLT8D2 83468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 12 104391269 104391269 + Silent SNP G G A rs142096211 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SVOP 55530 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 12 109316565 109316565 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO1H 283446 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 109882246 109882246 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GIT2 9815 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 110390995 110390995 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OAS1 4938 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 113346548 113346548 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLBD2 196463 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 113825669 113825669 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LOH12CR1 118426 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 12618601 12618601 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POLE 5426 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 133250211 133250211 + Missense_Mutation SNP C C T rs115047349 bycluster;by1000genomes;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C12orf60 144608 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 14976228 14976228 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ALPL 249 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 21887145 21887145 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ITPR2 3709 hgsc.bcm.edu;ucsc.edu 37 12 26581017 26581017 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 JMJD4 65094 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 227921193 227921193 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KLHDC5 57542 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 12 27933686 27933686 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HEATR1 55127 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 236762781 236762781 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NLRP3 114548 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 247587215 247587215 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRIM58 25893 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 248031300 248031300 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 VDR 7421 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 48272845 48272845 + Missense_Mutation SNP G G A rs147496897 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PGBD2 267002 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 249211775 249211775 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RND1 27289 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 12 49251932 49251932 + Silent SNP C C T rs145827381 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRKAG1 5571 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 49396782 49396782 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRPF40B 25766 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 50025707 50025707 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NCKAP5L 57701 broad.mit.edu;hgsc.bcm.edu 37 12 50185655 50185655 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNA1 3736 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 5020791 5020791 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GALNT6 11226 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 51752021 51752021 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT6C 286887 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 12 52867039 52867039 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT5 3852 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 12 52910639 52910639 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ESPL1 9700 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 53663207 53663207 + Missense_Mutation SNP C C T rs145536592 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TARBP2 6895 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 53895879 53895879 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HOXC13 3229 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 54333126 54333126 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ITGA7 3679 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 56090778 56090778 + Missense_Mutation SNP G G A rs146411608 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GDF11 10220 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 56142583 56142583 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ERBB3 2065 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 56478809 56478809 + Missense_Mutation SNP G G A rs77228285 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD52 283373 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 56648376 56648376 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 R3HDM2 22864 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 57693939 57693939 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 VWF 7450 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 6078503 6078503 + Nonsense_Mutation SNP G G A rs61751296 bycluster TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SCNN1A 6337 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 6471284 6471284 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DYRK2 8445 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 12 68052183 68052183 + Missense_Mutation SNP C C T rs138614034 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LPCAT3 10162 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 7088722 7088722 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OSBPL8 114882 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 76780412 76780412 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZDHHC17 23390 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 77222268 77222268 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC2A3 6515 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 12 8083895 8083895 + Silent SNP A A T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AICDA 57379 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 8757413 8757413 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RIMKLB 57494 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 8902463 8902463 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP2B1 490 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 89992451 89992451 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 VEZT 55591 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 12 95694384 95694384 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP11A 23250 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 113530121 113530121 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RASA3 22821 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 114780772 114780772 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SERINC2 347735 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 31899552 31899552 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC28B 79140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 32667610 32667610 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NBEA 26960 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 13 35733452 35733452 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WBP4 11193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 41657033 41657033 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPERT 220082 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 46287927 46287927 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RB1 5925 broad.mit.edu;hgsc.bcm.edu 37 13 49033915 49033915 + Frame_Shift_Del DEL C C - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DIS3 22894 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 13 73348179 73348179 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C1orf174 339448 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 3807424 3807424 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EPHA10 284656 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 38227629 38227629 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 INPP5B 3633 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 38345781 38345781 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HS6ST3 266722 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 97484970 97484970 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MACF1 23499 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 39951259 39951259 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NT5C1A 84618 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 40125029 40125029 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HHIPL1 84439 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 14 100141822 100141822 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RTL1 388015 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 14 101350657 101350657 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF839 55778 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 102807759 102807759 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EXOC3L4 91828 hgsc.bcm.edu 37 14 103568933 103568933 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TDRD9 122402 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 104431775 104431775 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AHNAK2 113146 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 105416582 105416582 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HIVEP3 59269 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 42047504 42047504 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TEP1 7011 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 20854663 20854663 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR5AU1 390445 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 21623218 21623218 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SUPT16H 11198 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 14 21834651 21834651 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ACIN1 22985 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 14 23530539 23530539 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NYNRIN 57523 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 24877295 24877295 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NYNRIN 57523 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 14 24879316 24879316 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GUCA2B 2981 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 42620453 42620453 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NPAS3 64067 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 14 34145548 34145548 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ST3GAL3 6487 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 44303969 44303969 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEMF 9147 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 14 50272839 50272839 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NIN 51199 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 51245506 51245506 + Missense_Mutation SNP C C T rs190295991 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAST2 23139 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 46493480 46493480 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFYVE1 53349 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 73441651 73441651 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RBM25 58517 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 73570174 73570174 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 YLPM1 56252 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 75302098 75302098 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TTC8 123016 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 14 89307767 89307767 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GOLGA5 9950 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 93277911 93277911 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAGEL2 54551 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 23889371 23889371 + Silent SNP A A T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HERC2 8924 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 28427617 28427617 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TJP1 7082 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 30010880 30010880 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFYVE19 84936 hgsc.bcm.edu;mdanderson.org 37 15 41105576 41105576 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLA2G4B 100137049 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 15 42131115 42131115 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EHD4 30844 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 15 42193092 42193092 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TGM7 116179 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 43585733 43585733 + Missense_Mutation SNP C C T rs150218635 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAP1A 4130 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 15 43821457 43821457 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBN1 2200 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 15 48703307 48703307 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CEP152 22995 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 49030737 49030737 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SECISBP2L 9728 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 49304966 49304966 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HERC1 8925 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 63966709 63966709 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLEKHO2 80301 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 65157910 65157910 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBAP1L 390595 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 65391969 65391969 + Silent SNP C C T rs185974312 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MEGF11 84465 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 66214758 66214758 + Silent SNP G G A rs146260891 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SMAD3 4088 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 67358664 67358664 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GLCE 26035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 69548276 69548276 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C1orf168 199920 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 57185885 57185885 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO9A 4649 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 15 72292238 72292238 + Missense_Mutation SNP G G A rs148826761 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HCN4 10021 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 73615982 73615982 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PML 5371 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 74315583 74315583 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PML 5371 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 15 74327978 74327978 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC33 80125 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 74554873 74554873 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SNX33 257364 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 75949418 75949418 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CSPG4 1464 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 75980709 75980709 + Silent SNP C C T rs144209551 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSPAN3 10099 hgsc.bcm.edu 37 15 77363263 77363263 + Missense_Mutation SNP C C T rs111428129 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMC3 342125 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 81630237 81630237 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMC3 342125 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 81637207 81637207 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ALPK3 57538 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 85403008 85403008 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NTRK3 4916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 88420245 88420245 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NPHP4 261734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 5951002 5951002 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IGF1R 3480 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 99454671 99454671 + Splice_Site SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSAB1 7177 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 16 1291624 1291624 + Silent SNP C C G rs1064782 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IFT140 9742 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 16 1574679 1574679 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYH11 4629 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 16 15818057 15818057 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NFIA 4774 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 61818215 61818215 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ITPRIPL2 162073 hgsc.bcm.edu;ucsc.edu 37 16 19126839 19126839 + Silent SNP A A C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UMOD 7369 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 20360337 20360337 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NTHL1 4913 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 16 2093638 2093638 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OTOA 146183 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 21734300 21734300 + Splice_Site SNP G G A rs148690740 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UQCRC2 7385 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 21968871 21968871 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRAF7 84231 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 2226329 2226329 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRKCB 5579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 23999859 23999859 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CEMP1 752014 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 2580968 2580968 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SULT1A2 6799 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 16 28603675 28603675 + Silent SNP C C T rs141569114 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOCK7 85440 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 62979274 62979274 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SRCAP 10847 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 16 30748499 30748499 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF646 9726 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 31090347 31090347 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF263 10127 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 16 3334016 3334016 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPL 5493 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 16 4934370 4934370 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF423 23090 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 16 49671194 49671194 + Silent SNP G G A rs151294188 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IRX6 79190 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 16 55360358 55360358 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM192A 80011 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 57188284 57188284 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZBTB48 3104 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 6646763 6646763 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC12A4 6560 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 67980419 67980419 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RHBDL1 9028 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 727990 727990 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MSLN 10232 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 16 818456 818456 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 USP10 9100 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 16 84778426 84778426 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ACSF3 197322 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 16 89169104 89169104 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DEF8 54849 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 90020686 90020686 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ELAC2 60528 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 12896262 12896262 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO15A 51168 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 18052173 18052173 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC5A10 125206 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 18923133 18923133 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NF1 4763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 29653046 29653046 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ITGAE 3682 hgsc.bcm.edu;ucsc.edu 37 17 3649159 3649159 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RAPGEFL1 51195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 38345215 38345215 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RARA 5914 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 38512460 38512460 + Silent SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT15 3866 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 17 39673348 39673348 + Missense_Mutation SNP C C T rs147023381 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SMTNL2 342527 hgsc.bcm.edu;ucsc.edu 37 17 4500239 4500239 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NLRP1 22861 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 5436264 5436264 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRIM25 7706 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 54985879 54985879 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MKS1 54903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 56290442 56290442 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BCAS3 54828 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 17 59445725 59445725 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TEX2 55852 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 62291323 62291323 + Silent SNP G G A rs139320801 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HELZ 9931 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 65134098 65134098 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC16A13 201232 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 6941569 6941569 + Missense_Mutation SNP G G A rs147982952 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEURL4 84461 hgsc.bcm.edu;mdanderson.org 37 17 7228701 7228701 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RECQL5 9400 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 73626346 73626346 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF157 114804 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 74157965 74157965 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SEPT9 10801 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 17 75471796 75471796 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TP53 7157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 7578263 7578263 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TNRC6C 57690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 76071339 76071339 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHD3 1107 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 7814222 7814222 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF213 57674 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 78320904 78320904 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC38A10 124565 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 17 79226231 79226231 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C17orf70 80233 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 17 79512906 79512906 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HGS 9146 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 79663491 79663491 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FUBP1 8880 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 78428480 78428480 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 USP14 9097 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 18 198072 198072 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LAMA3 3909 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 18 21474920 21474920 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NDC80 10403 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 18 2610781 2610781 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DSG4 147409 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 18 28972125 28972125 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LOXHD1 125336 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 18 44057528 44057528 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TCEB3B 51224 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 18 44561229 44561229 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CTIF 9811 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 18 46146071 46146071 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR7 23335 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 18 54591323 54591323 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NFATC1 4772 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 77170445 77170445 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ICAM4 3386 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 10398019 10398019 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ILF3 3609 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 10794618 10794618 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 QTRT1 81890 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 10818003 10818003 + Silent SNP C C T rs151104617 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SBNO2 22904 hgsc.bcm.edu;mdanderson.org 37 19 1116900 1116900 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM205 374882 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 19 11453630 11453630 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ELAVL3 1995 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 11568980 11568980 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF441 126068 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 11892622 11892622 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF878 729747 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 12155144 12155144 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TNPO2 30000 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 12812988 12812988 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NFIX 4784 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 13186460 13186460 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LPHN1 22859 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 14268815 14268815 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC1A6 6511 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 15063793 15063793 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NOTCH3 4854 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 15297722 15297722 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TCF3 6929 hgsc.bcm.edu 37 19 1621856 1621856 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SIN3B 23309 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 16976291 16976291 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HFM1 164045 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 1 91809065 91809065 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HAPLN4 404037 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 19369385 19369385 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AMH 268 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 2249496 2249496 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMPRSS9 360200 hgsc.bcm.edu;mdanderson.org 37 19 2425067 2425067 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR88 126248 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 33666433 33666433 + Silent SNP G G A rs145406953 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WTIP 126374 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 34984440 34984440 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FFAR2 2867 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 35941487 35941487 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RBM42 79171 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 36120479 36120479 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MLL4 8085 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 36210898 36210898 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C19orf55 148137 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 36255795 36255795 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARHGAP33 115703 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 36279135 36279135 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIRREL2 84063 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 36349605 36349605 + Splice_Site SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RASGRP4 115727 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 38901988 38901988 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FCGBP 8857 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 19 40366434 40366434 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPTBN4 57731 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 41072217 41072217 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ADCK4 79934 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 41198899 41198899 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POU2F2 5452 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 42600329 42600329 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF526 116115 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 42729973 42729973 + Missense_Mutation SNP G G A rs149858475 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ERF 2077 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 42754628 42754628 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MEGF8 1954 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 42861000 42861000 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LYPD3 27076 hgsc.bcm.edu;ucsc.edu 37 19 43965542 43965542 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLIN4 729359 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 4511019 4511019 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TOMM40 10452 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 19 45397308 45397308 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GRIN2D 2906 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 48945611 48945611 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LMTK3 114783 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 49002432 49002432 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FUT2 2524 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 49206425 49206425 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GYS1 2997 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 49473833 49473833 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NTF4 4909 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 49564657 49564657 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AP2A1 160 hgsc.bcm.edu 37 19 50305240 50305240 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYH14 79784 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 19 50760714 50760714 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SIGLEC7 27036 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 51646040 51646040 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CD33 945 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 51738931 51738931 + Silent SNP G G A rs111722079 bycluster TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HAS1 3036 hgsc.bcm.edu 37 19 52217097 52217097 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSEN34 79042 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 54696083 54696083 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SSC5D 284297 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 19 56011928 56011928 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LONP1 9361 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 5707746 5707746 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF805 390980 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 19 57765510 57765510 + Silent SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BSG 682 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 19 579590 579590 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARHGEF18 23370 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 7505040 7505040 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PNPLA6 10908 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 7606949 7606949 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBN3 84467 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 8201286 8201286 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AGRN 375790 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 985016 985016 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO1F 4542 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 8592315 8592315 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OLFM2 93145 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 9967485 9967485 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MACROD2 140733 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 16021924 16021924 + Splice_Site SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OVOL2 58495 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 20 18022295 18022295 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF133 7692 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 18287023 18287023 + Missense_Mutation SNP C C T rs149645929 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NKX2-4 644524 hgsc.bcm.edu;ucsc.edu 37 20 21376975 21376975 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMC2 117532 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 2560637 2560637 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COX4I2 84701 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 30231238 30231238 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC32A1 140679 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 37353701 37353701 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPP1R16B 26051 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 37529279 37529279 + Missense_Mutation SNP G G A rs139690056 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLCG1 5335 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 20 39801085 39801085 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RBCK1 10616 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 20 398443 398443 + Missense_Mutation SNP A A T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LPIN3 64900 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 39980542 39980542 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBC1D20 128637 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 420958 420958 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MMP9 4318 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 44641958 44641958 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC2A10 81031 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 45355544 45355544 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPATA2 9825 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 48524979 48524979 + Missense_Mutation SNP G G A rs77667957 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BCAS1 8537 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 52601913 52601913 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BCAS1 8537 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 52645320 52645320 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM209B 388799 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 20 55111249 55111249 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZBP1 81030 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 20 56185305 56185305 + Silent SNP G G A rs186925447 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF831 128611 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 57769704 57769704 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HRH3 11255 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 60791451 60791451 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C20orf20 55257 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 61429984 61429984 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHRNA4 1137 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 61981545 61981545 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNQ2 3785 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 62065203 62065203 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C20orf195 79025 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 20 62187191 62187191 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRIC285 85441 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 62200925 62200925 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UCKL1 54963 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 20 62571654 62571654 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM110A 83541 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 826273 826273 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AFF3 3899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 100210166 100210166 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM177 80775 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 120438454 120438454 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IGSF5 150084 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 21 41151173 41151173 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COBLL1 22837 broad.mit.edu;hgsc.bcm.edu 37 2 165578972 165578972 + Frame_Shift_Del DEL A A - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TTN 7273 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 2 179460285 179460285 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 2 179578856 179578856 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYT1L 23040 hgsc.bcm.edu;mdanderson.org 37 2 1896005 1896005 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UNC80 285175 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 210808138 210808138 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRODH 5625 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 18912624 18912624 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SEPT5 5413 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 19707904 19707904 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C22orf29 79680 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 22 19839716 19839716 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ASIC4 55515 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 220379312 220379312 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OBSL1 23363 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 2 220435086 220435086 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IGLL5 100423062 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 22 23230424 23230424 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GNAZ 2781 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 23438268 23438268 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SMARCB1 6598 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 24176351 24176351 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ADORA2A 135 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 24837116 24837116 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO18B 84700 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 26422449 26422449 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SEZ6L 23544 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 22 26688611 26688611 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PID1 55022 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 230127481 230127481 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MORC2 22880 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 31328607 31328607 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EIF4ENIF1 56478 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 31851930 31851930 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RBFOX2 23543 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 36334942 36334942 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLA2G6 8398 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 22 38522429 38522429 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLA2G6 8398 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 22 38536030 38536030 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KDELR3 11015 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 38875685 38875685 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ILKAP 80895 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 239079272 239079272 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TNRC6B 23112 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 40717184 40717184 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CENPM 79019 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 42341239 42341239 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C22orf32 91689 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 42475891 42475891 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C22orf32 91689 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 42475902 42475902 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TCF20 6942 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 42607545 42607545 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARFGAP3 26286 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 43236982 43236982 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSPO 706 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 43558971 43558971 + Missense_Mutation SNP C C T rs41371752 bycluster;byfrequency;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CELSR1 9620 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 46806300 46806300 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBC1D22A 25771 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 47189694 47189694 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLXNB2 23654 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 22 50720400 50720400 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLXNB2 23654 hgsc.bcm.edu 37 22 50726135 50726135 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DTNB 1838 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 2 25799755 25799755 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C2orf16 84226 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 2 27802448 27802448 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EHD3 30845 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 31484520 31484520 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BIRC6 57448 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 32713733 32713733 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNG3 170850 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 2 42720408 42720408 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C2orf63 130162 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 55408743 55408743 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ETAA1 54465 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 2 67637129 67637129 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EGR4 1961 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 73520376 73520376 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TCF7L1 83439 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 85533623 85533623 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POLR1A 25885 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 2 86315989 86315989 + Missense_Mutation SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ROPN1 54763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 123689003 123689003 + Missense_Mutation SNP G G A rs140868038 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ITGB5 3693 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 3 124515406 124515406 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CAND2 23066 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 3 12858741 12858741 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IFT122 55764 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 3 129233374 129233374 + Missense_Mutation SNP G G A rs149245630 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RAB6B 51560 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 3 133553468 133553468 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATR 545 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 3 142272665 142272665 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C3orf20 84077 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 14724594 14724594 + Missense_Mutation SNP G G A rs145497672 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EIF4G1 1981 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 3 184038753 184038753 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CLCN2 1181 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 3 184073265 184073265 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TP63 8626 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 3 189526150 189526150 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP13A3 79572 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 194149621 194149621 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DLG1 1739 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 3 196792176 196792176 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EFHB 151651 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 19921161 19921161 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GADL1 339896 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 3 30769804 30769804 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 STT3B 201595 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 3 31617961 31617961 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCLK3 85443 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 36759593 36759593 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC22A13 9390 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 38316965 38316965 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF621 285268 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 40573994 40573994 + Missense_Mutation SNP C C T rs144763141 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF197 10168 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 44684294 44684294 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COL7A1 1294 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 48626075 48626075 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NDUFAF3 25915 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 3 49059935 49059935 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MST1 4485 hgsc.bcm.edu;mdanderson.org 37 3 49723817 49723817 + Silent SNP G G A rs146923247 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RBM6 10180 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 50005642 50005642 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNAH1 25981 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 52420183 52420183 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 STAB1 23166 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 3 52552013 52552013 + Silent SNP C C T rs185967985 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATXN7 6314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 63981293 63981293 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPR27 2850 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 3 71804265 71804265 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ROBO1 6091 hgsc.bcm.edu;ucsc.edu 37 3 78666912 78666912 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CGGBP1 8545 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 3 88105046 88105046 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CIDEC 63924 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 9918797 9918797 + Missense_Mutation SNP C C T rs148744468 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HS3ST1 9957 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 11401504 11401504 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SYNPO2 171024 hgsc.bcm.edu;ucsc.edu 37 4 119951253 119951253 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BOD1L1 259282 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 13592029 13592029 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UCP1 7350 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 141481158 141481158 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCHS2 54798 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 155254288 155254288 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FGB 2244 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 4 155487081 155487081 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HMGB2 3148 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 4 174254650 174254650 + Splice_Site SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SNX25 83891 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 4 186185677 186185677 + Missense_Mutation SNP C C T rs140041413 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NOP14 8602 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 2950032 2950032 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HGFAC 3083 hgsc.bcm.edu;mdanderson.org 37 4 3446155 3446155 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA1211 57482 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 4 57182448 57182448 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA1211 57482 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 57189672 57189672 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FRAS1 80144 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 79236854 79236854 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RASGEF1B 153020 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 4 82366931 82366931 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SCD5 79966 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 83557759 83557759 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CPZ 8532 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 8607769 8607769 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC26A1 10861 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 983647 983647 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC112 153733 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 114607065 114607065 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FTMT 94033 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 5 121188112 121188112 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SIL1 64374 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 138287496 138287496 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHGA4 56111 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 140735119 140735119 + Missense_Mutation SNP C C T rs182004159 by1000genomes;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHGB5 56101 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 5 140779700 140779700 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDH1 5097 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 141233894 141233894 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NR3C1 2908 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 5 142661564 142661564 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HMGXB3 22993 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 149404017 149404017 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP10B 23120 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 160047389 160047389 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GABRG2 2566 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 161531032 161531032 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNIP1 30820 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 5 169931585 169931585 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COL23A1 91522 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 177679589 177679589 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF879 345462 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 178454554 178454554 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FLT4 2324 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 5 180052908 180052908 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RAI14 26064 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 34821933 34821933 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NIPBL 25836 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 37036493 37036493 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LIFR 3977 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 5 38510729 38510729 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTGER4 5734 hgsc.bcm.edu;mdanderson.org 37 5 40681716 40681716 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NNT 23530 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 5 43613077 43613077 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C5orf55 116349 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 5 442635 442635 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MRPS30 10884 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 44812095 44812095 + Missense_Mutation SNP C C T rs61753790 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PIK3R1 5295 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 67522808 67522808 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PDE8B 8622 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 5 76645327 76645327 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ACOT12 134526 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 80640001 80640001 + Missense_Mutation SNP G G A rs149103852 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM161B 153396 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 87494939 87494939 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AIM1 202 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 107000090 107000090 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MICAL1 64780 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 6 109766433 109766433 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MICAL1 64780 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 109769510 109769510 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NCOA7 135112 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 6 126210643 126210643 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBC1D7 51256 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 13321234 13321234 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BCLAF1 9774 hgsc.bcm.edu 37 6 136594328 136594328 + Splice_Site DEL G G - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA1244 57221 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 138655393 138655393 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 STXBP5 134957 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 147527114 147527114 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NOX3 50508 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 155764489 155764489 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HIST1H3C 8352 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 26045706 26045706 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HIST1H1T 3010 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 26108074 26108074 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBD 10537 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 6 29524017 29524017 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DDR1 780 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 6 30864435 30864435 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MDGA1 266727 hgsc.bcm.edu 37 6 37618098 37618098 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM50B 26240 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 3850118 3850118 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNAH8 1769 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 38773263 38773263 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBR2 23304 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 42641562 42641562 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CUL9 23113 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 43164505 43164505 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF318 24149 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 43309889 43309889 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF318 24149 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 43323076 43323076 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ABCC10 89845 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 43415467 43415467 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPATS1 221409 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 6 44329698 44329698 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GLYATL3 389396 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 49494458 49494458 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RREB1 6239 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 7231628 7231628 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RREB1 6239 hgsc.bcm.edu 37 6 7247005 7247005 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DSP 1832 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 7580988 7580988 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PHIP 55023 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 79711796 79711796 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SNX14 57231 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 86248557 86248557 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD6 22881 hgsc.bcm.edu;ucsc.edu 37 6 90333671 90333671 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BACH2 60468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 6 90661558 90661558 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAP3K7 6885 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 91261815 91261815 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBXO24 26261 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 100198383 100198383 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC12A9 56996 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 100454700 100454700 + Missense_Mutation SNP G G A rs150811167 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SRRT 51593 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 100484814 100484814 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYL10 93408 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 101259535 101259535 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CDHR3 222256 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 105669000 105669000 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LAMB4 22798 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 107717415 107717415 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOCK4 9732 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 111368531 111368531 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WNT2 7472 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 116918232 116918232 + Missense_Mutation SNP C C T rs143749132 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CTTNBP2 83992 hgsc.bcm.edu;ucsc.edu 37 7 117407222 117407222 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WASL 8976 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 123346348 123346348 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 VWDE 221806 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 12396889 12396889 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NUP205 23165 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 135292055 135292055 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBN2 254048 broad.mit.edu;hgsc.bcm.edu 37 7 138969008 138969010 + In_Frame_Del DEL CAG CAG - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 CAG CAG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR9A4 130075 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 141619431 141619431 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRSS58 136541 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 141952190 141952190 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR2A2 442361 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 143807471 143807471 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SSPO 23145 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 149483252 149483252 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM176B 28959 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 150490188 150490188 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNH2 3757 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 150648045 150648045 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM184A 202915 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 7 1588279 1588279 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM221A 340277 hgsc.bcm.edu;ucsc.edu 37 7 23724139 23724139 + Silent SNP A A T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 URGCP 55665 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 43917672 43917672 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NPC1L1 29881 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 7 44579467 44579467 + Missense_Mutation SNP C C T rs149017550 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LAT2 7462 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 7 73630393 73630393 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COL28A1 340267 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 7472278 7472278 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LMTK2 22853 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 97823453 97823453 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRRAP 8295 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 98576517 98576517 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF3 7551 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 99669271 99669271 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CSMD3 114788 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 113657336 113657336 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRPS1 7227 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 116430676 116430676 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ENPP2 5168 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 120606001 120606001 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ENPP2 5168 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 120628543 120628543 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TG 7038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 133953625 133953625 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C8orf48 157773 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 13424581 13424581 + Missense_Mutation SNP C C G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFAT 57623 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 135615108 135615108 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DENND3 22898 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 142178160 142178160 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 JRK 8629 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 143746611 143746611 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAPK15 225689 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 144800421 144800421 + Missense_Mutation SNP G G A rs140275267 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EPPK1 83481 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 144942815 144942815 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLEC 5339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 144995547 144995547 + Silent SNP G G A rs186703073 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPATC1 375686 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 145094825 145094825 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPAA1 8733 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 145138659 145138659 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPAA1 8733 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 145139221 145139221 + Silent SNP G G A rs189367473 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TONSL 4796 hgsc.bcm.edu;ucsc.edu 37 8 145668062 145668062 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RPL8 6132 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 146015277 146015277 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MTUS1 57509 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 17503472 17503472 + Missense_Mutation SNP G G A rs148435996 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CSGALNACT1 55790 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 8 19363316 19363316 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LZTS1 11178 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 20110814 20110814 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EPB49 2039 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 21924625 21924625 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HR 55806 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 21983099 21983099 + Missense_Mutation SNP G G A rs138624433 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LGI3 203190 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 22012104 22012104 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 R3HCC1 203069 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 23153579 23153579 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LOXL2 4017 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 23174480 23174480 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CDCA2 157313 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 25341585 25341585 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DPYSL2 1808 broad.mit.edu;hgsc.bcm.edu 37 8 26513189 26513189 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GTF2E2 2961 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 30436512 30436512 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BRF2 55290 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 37706116 37706116 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AP3M2 10947 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 8 42015607 42015607 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC20A2 6575 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 42296994 42296994 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HOOK3 84376 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 8 42873507 42873507 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HGSNAT 138050 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 43052122 43052122 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OPRK1 4986 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 54147439 54147439 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NSMAF 8439 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 59499082 59499082 + Missense_Mutation SNP G G A rs138530641 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHD7 55636 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 61766042 61766042 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFHX4 79776 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 77775707 77775707 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IMPA1 3612 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 82571603 82571603 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DECR1 1666 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 91029431 91029431 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA1429 25962 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 95541376 95541376 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MATN2 4147 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 98943420 98943420 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RGS3 5998 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 116353631 116353631 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF618 114991 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 116812166 116812166 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TNC 3371 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 117797539 117797539 + Missense_Mutation SNP G G A rs148674204 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DBC1 1620 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 122001025 122001025 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RABEPK 10244 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 9 127975736 127975736 + Missense_Mutation SNP G G A rs147509125 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZBTB34 403341 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 129642636 129642636 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANGPTL2 23452 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 129870870 129870870 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC2A8 29988 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 130167788 130167788 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FPGS 2356 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 9 130569287 130569287 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PIP5KL1 138429 hgsc.bcm.edu;ucsc.edu 37 9 130684387 130684387 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GOLGA2 2801 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 9 131023004 131023004 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPTAN1 6709 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 131329101 131329101 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOLPP1 57171 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 131849014 131849014 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRRC2B 84726 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 9 134334701 134334701 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NTNG2 84628 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 135073709 135073709 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GTF3C4 9329 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 135553528 135553528 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COL5A1 1289 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 9 137712006 137712006 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ABCA2 20 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 139908708 139908708 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANAPC2 29882 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 9 140074818 140074818 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PNPLA7 375775 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 140355132 140355132 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACNA1B 774 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 140941360 140941360 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BNC2 54796 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 16552695 16552695 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LINGO2 158038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 27949033 27949033 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCL27 10850 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 9 34661943 34661943 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PIGO 84720 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 35095327 35095327 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C9orf100 84904 broad.mit.edu;hgsc.bcm.edu 37 9 35664388 35664389 + Frame_Shift_Del DEL CT CT - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 CT CT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FXN 2395 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 9 71668178 71668178 + Splice_Site SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTPRD 5789 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 8485823 8485823 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C9orf64 84267 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 86571236 86571236 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SHC3 53358 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 91692802 91692802 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 H2BFM 286436 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 103294871 103294871 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IL13RA1 3597 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 X 117907851 117907851 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCAF12L2 340578 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 125299514 125299514 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ENOX2 10495 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 129804011 129804011 + Missense_Mutation SNP G G A rs143816261 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATXN3L 92552 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 13337345 13337345 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FMR1 2332 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 147011711 147011711 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC25A6 293 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 1506261 1506261 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DUSP9 1852 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 152915503 152915503 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM47C 442444 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 37028375 37028375 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NLGN4X 57502 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 5827148 5827148 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIF4A 24137 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 69595076 69595076 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TEX11 56159 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 70080718 70080718 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NHSL2 340527 hgsc.bcm.edu;mdanderson.org 37 X 71360545 71360545 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DDR2 4921 hgsc.bcm.edu 37 1 162724541 162724541 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NOC3L 64318 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 10 96121511 96121511 + Missense_Mutation SNP C C T rs77771649 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 JAM3 83700 broad.mit.edu;hgsc.bcm.edu 37 11 134009776 134009777 + Silent DNP CC CC AA novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 CC CC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NCAPD3 23310 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 134027834 134027834 + Missense_Mutation SNP G G A rs116394634 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MRPL24 79590 hgsc.bcm.edu;bcgsc.ca 37 1 156708172 156708172 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RAB1B 81876 broad.mit.edu;hgsc.bcm.edu 37 11 66039636 66039636 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SUV420H1 51111 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 11 67925896 67925896 + Silent SNP G G A rs149239650 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 P4HA3 283208 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 11 73988139 73988139 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AXDND1 126859 hgsc.bcm.edu 37 1 179494565 179494568 + Frame_Shift_Del DEL AAAG AAAG - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 AAAG AAAG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC60 160777 broad.mit.edu;hgsc.bcm.edu 37 12 119968788 119968788 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EPHA8 2046 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 1 22902937 22902937 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT81 3887 broad.mit.edu;hgsc.bcm.edu 37 12 52681795 52681795 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT81 3887 hgsc.bcm.edu 37 12 52681804 52681804 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT81 3887 hgsc.bcm.edu 37 12 52682214 52682214 + Silent SNP C C T rs141008448 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT2 3849 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 12 53045674 53045674 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IFFO1 25900 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 6657689 6657689 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MPHOSPH8 54737 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 13 20220830 20220830 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NCDN 23154 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 1 36028957 36028957 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MOB3C 148932 broad.mit.edu;hgsc.bcm.edu 37 1 47078805 47078805 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC1A7 6512 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 53580601 53580601 + Missense_Mutation SNP C C T rs139757854 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RTF1 23168 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 15 41769459 41769459 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HOMER2 9455 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 15 83527811 83527811 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCUN1D3 123879 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 16 20873571 20873571 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GRB7 2886 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 17 37900401 37900401 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP2A3 489 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 17 3839671 3839671 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM99 147184 hgsc.bcm.edu;bcgsc.ca 37 17 38990812 38990812 + Missense_Mutation SNP C C T rs189743949 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF213 57674 hgsc.bcm.edu;mdanderson.org 37 17 78318717 78318717 + Silent SNP G G A rs140158248 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZBTB7C 201501 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 18 45567082 45567082 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR7 23335 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 18 54358459 54358459 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBXA2R 6915 hgsc.bcm.edu 37 19 3595775 3595775 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LENG8 114823 hgsc.bcm.edu;mdanderson.org 37 19 54966579 54966579 + Silent SNP C C T rs889147 bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF776 284309 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 19 58264681 58264681 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPR108 56927 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 6733232 6733232 + Silent SNP G G A rs77003966 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF343 79175 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 20 2464066 2464066 + Missense_Mutation SNP G G A rs139834625 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EDN3 1908 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 20 57899467 57899467 + Missense_Mutation SNP G G A rs11570351 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BUB1 699 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 2 111416221 111416221 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LTN1 26046 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 21 30307615 30307615 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PIKFYVE 200576 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 209214769 209214769 + Missense_Mutation SNP C C T rs147015179 bycluster;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PISD 23761 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 32019743 32019743 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 APOBEC3G 60489 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 22 39482315 39482315 + Missense_Mutation SNP G G A rs17000736 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SHANK3 85358 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 22 51117231 51117231 + Silent SNP C C T rs79762996 byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OXER1 165140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 42990143 42990143 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OXER1 165140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 42990181 42990181 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GFPT1 2673 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 2 69583647 69583647 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLXNA1 5361 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 126723819 126723819 + Missense_Mutation SNP C C T rs117043507 by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOCK3 1795 hgsc.bcm.edu;mdanderson.org 37 3 51315164 51315164 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPAT 5471 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 4 57267640 57267640 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHA8 56140 hgsc.bcm.edu;mdanderson.org 37 5 140222343 140222343 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHA9 9752 hgsc.bcm.edu;mdanderson.org 37 5 140229541 140229541 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHA11 56138 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 5 140250128 140250128 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SH3RF2 153769 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 5 145428792 145428792 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DAB2 1601 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 5 39377146 39377146 + Silent SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PKHD1 5314 hgsc.bcm.edu;bcgsc.ca 37 6 51695719 51695719 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TTK 7272 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 6 80749554 80749554 + Missense_Mutation SNP G G A rs2230512 bycluster;byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LAMB1 3912 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 107605032 107605032 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KLF14 136259 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 130417993 130417993 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ABCB5 340273 hgsc.bcm.edu;mdanderson.org 37 7 20778687 20778687 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 XPO7 23039 hgsc.bcm.edu 37 8 21827087 21827087 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LOXL2 4017 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 8 23174516 23174516 + Missense_Mutation SNP C C T rs145002005 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IKBKB 3551 broad.mit.edu;hgsc.bcm.edu 37 8 42179650 42179650 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UAP1L1 91373 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 9 139973538 139973538 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCSK5 5125 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 9 78641898 78641898 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM120A 23196 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 9 96326776 96326776 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM199X 139231 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 103431192 103431192 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LRCH2 57631 hgsc.bcm.edu 37 X 114357360 114357360 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF280C 55609 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 129363022 129363022 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KLHL34 257240 hgsc.bcm.edu 37 X 21675168 21675168 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GJB1 2705 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 70443744 70443744 + Missense_Mutation SNP G G A rs116840818 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HES4 57801 broad.mit.edu;mdanderson.org 37 1 934923 934923 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AGRN 375790 broad.mit.edu 37 1 978746 978746 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WRAP73 49856 broad.mit.edu 37 1 3547644 3547644 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TP73 7161 broad.mit.edu;mdanderson.org;bcgsc.ca 37 1 3599709 3599709 + Missense_Mutation SNP G G A rs146218192 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC45A1 50651 broad.mit.edu 37 1 8385423 8385423 + Missense_Mutation SNP C C T rs200531790 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBE4B 10277 broad.mit.edu;bcgsc.ca 37 1 10155570 10155570 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRDM2 7799 broad.mit.edu;mdanderson.org 37 1 14107224 14107224 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLEKHM2 23207 broad.mit.edu;ucsc.edu;mdanderson.org 37 1 16053893 16053893 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CROCCP3 114819 broad.mit.edu 37 1 16817159 16817159 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HTR6 3362 broad.mit.edu;ucsc.edu;mdanderson.org 37 1 20005813 20005813 + Silent SNP C C T rs201218739 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SEPN1 57190 broad.mit.edu;bcgsc.ca 37 1 26140634 26140634 + Missense_Mutation SNP G G A rs138259627 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BAI2 576 broad.mit.edu 37 1 32222290 32222290 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AGO3 192669 broad.mit.edu;bcgsc.ca 37 1 36479606 36479606 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SZT2 23334 broad.mit.edu 37 1 43896377 43896377 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BEND5 79656 broad.mit.edu 37 1 49208391 49208391 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KANK4 163782 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 62739646 62739646 + Missense_Mutation SNP A A T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACHD1 57685 broad.mit.edu;mdanderson.org;bcgsc.ca 37 1 65146953 65146953 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GSTM2 2946 broad.mit.edu 37 1 110211966 110211966 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC6A17 388662 broad.mit.edu;mdanderson.org;bcgsc.ca 37 1 110709687 110709687 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IGSF3 3321 broad.mit.edu;mdanderson.org;bcgsc.ca 37 1 117150686 117150686 + Missense_Mutation SNP C C T rs202203327 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HORMAD1 84072 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 150679259 150679259 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POGZ 23126 broad.mit.edu;ucsc.edu;mdanderson.org 37 1 151377515 151377515 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SNX27 81609 broad.mit.edu 37 1 151641045 151641045 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBAP2L 9898 broad.mit.edu 37 1 154209571 154209571 + Missense_Mutation SNP C C T rs147740832 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C1orf114 57821 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 169391220 169391220 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLXNA2 5362 broad.mit.edu;bcgsc.ca 37 1 208383788 208383788 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TARBP1 6894 broad.mit.edu 37 1 234527364 234527364 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR2L1P 26247 broad.mit.edu 37 1 248154473 248154473 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR2M3 127062 broad.mit.edu;bcgsc.ca 37 1 248366613 248366613 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RSU1 6251 broad.mit.edu 37 10 16858984 16858984 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEBL 10529 broad.mit.edu 37 10 21097515 21097515 + Silent SNP G G A rs140245727 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLCE1 51196 broad.mit.edu 37 10 96022395 96022395 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNMBP 23268 broad.mit.edu;ucsc.edu 37 10 101716912 101716912 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SEMA4G 57715 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 102743469 102743469 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNHD1 144132 broad.mit.edu;mdanderson.org;bcgsc.ca 37 11 6555328 6555328 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TAF10 6881 broad.mit.edu;ucsc.edu;mdanderson.org 37 11 6632970 6632970 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPP1 1200 broad.mit.edu;bcgsc.ca 37 11 6638918 6638918 + Missense_Mutation SNP C C T rs201613668 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GALNT18 374378 broad.mit.edu;mdanderson.org 37 11 11400665 11400665 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNC1 3746 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 17793281 17793281 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIF18A 81930 broad.mit.edu;mdanderson.org 37 11 28110079 28110079 + Missense_Mutation SNP C C G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBXO3 26273 broad.mit.edu;ucsc.edu;mdanderson.org 37 11 33770354 33770354 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GLYATL1 92292 broad.mit.edu;bcgsc.ca 37 11 58711065 58711065 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DDB1 1642 broad.mit.edu;mdanderson.org;bcgsc.ca 37 11 61081572 61081572 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR74 54663 broad.mit.edu;mdanderson.org 37 11 62601996 62601996 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC88B 283234 broad.mit.edu 37 11 64120286 64120286 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATG2A 23130 broad.mit.edu;bcgsc.ca 37 11 64665396 64665396 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSGA10IP 254187 broad.mit.edu;ucsc.edu;mdanderson.org 37 11 65721060 65721060 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RIN1 9610 broad.mit.edu;mdanderson.org 37 11 66101541 66101541 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CPT1A 1374 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 68530138 68530138 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARRB1 408 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 74988453 74988453 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSKU 25987 broad.mit.edu;mdanderson.org 37 11 76506753 76506753 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BIRC3 330 broad.mit.edu 37 11 102201825 102201825 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MMP1 4312 broad.mit.edu;bcgsc.ca 37 11 102667418 102667418 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MMP12 4321 broad.mit.edu;ucsc.edu;mdanderson.org 37 11 102738681 102738681 + Missense_Mutation SNP G G A rs183458117 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C11orf71 54494 broad.mit.edu 37 11 114262382 114262382 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CEP164 22897 broad.mit.edu 37 11 117262985 117262985 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNJ5 3762 broad.mit.edu;ucsc.edu;mdanderson.org 37 11 128781258 128781258 + Silent SNP C C T rs201886526 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IGSF9B 22997 broad.mit.edu;mdanderson.org 37 11 133800913 133800913 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLEKHG6 55200 broad.mit.edu;bcgsc.ca 37 12 6435610 6435610 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C1R 715 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 7188165 7188165 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DDX12P 440081 broad.mit.edu 37 12 9578189 9578189 + RNA SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LRRK2 120892 broad.mit.edu 37 12 40689347 40689347 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM117 84216 broad.mit.edu 37 12 44238507 44238507 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HDAC7 51564 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 48185382 48185382 + Silent SNP G G A rs138164422 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMPRSS12 283471 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 51252617 51252617 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NR4A1 3164 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 52449897 52449897 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ESPL1 9700 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 53685530 53685530 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CPSF6 11052 broad.mit.edu;ucsc.edu 37 12 69656278 69656278 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PARPBP 55010 broad.mit.edu 37 12 102590010 102590010 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RFX4 5992 broad.mit.edu 37 12 107105260 107105260 + Missense_Mutation SNP C C T rs76703390 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TAOK3 51347 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 118588925 118588925 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CIT 11113 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 120150093 120150093 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPR133 283383 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 131466490 131466490 + Silent SNP G G A rs145796361 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EP400 57634 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 132474512 132474512 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC7A1 6541 broad.mit.edu;ucsc.edu 37 13 30088682 30088682 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPG20 23111 broad.mit.edu;ucsc.edu 37 13 36909383 36909383 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR4K13 390433 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 20502143 20502143 + Missense_Mutation SNP C C T rs199734457 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TTC5 91875 broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 20763923 20763923 + Nonsense_Mutation SNP G G A rs199831317 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC7A8 23428 broad.mit.edu;mdanderson.org;bcgsc.ca 37 14 23596496 23596496 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LRRC16B 90668 broad.mit.edu 37 14 24529235 24529235 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PSME2 5721 broad.mit.edu 37 14 24615753 24615753 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TSSK4 283629 broad.mit.edu;mdanderson.org;bcgsc.ca 37 14 24675808 24675808 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TINF2 26277 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 24709841 24709841 + Missense_Mutation SNP C C T rs121918544 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HECTD1 25831 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 31609189 31609189 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPR137C 283554 broad.mit.edu;mdanderson.org;bcgsc.ca 37 14 53100600 53100600 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SYT16 83851 broad.mit.edu;bcgsc.ca 37 14 62463128 62463128 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEK9 91754 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 75555313 75555313 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPR65 8477 broad.mit.edu;mdanderson.org;bcgsc.ca 37 14 88477823 88477823 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNK10 54207 broad.mit.edu;mdanderson.org 37 14 88652027 88652027 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTPN21 11099 broad.mit.edu;ucsc.edu;mdanderson.org 37 14 88945933 88945933 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FOXN3 1112 broad.mit.edu 37 14 89817014 89817014 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RPS6KA5 9252 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 91366523 91366523 + Missense_Mutation SNP A A C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATG2B 55102 broad.mit.edu;mdanderson.org;bcgsc.ca 37 14 96772058 96772058 + Missense_Mutation SNP G G A rs138090571 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PAPOLA 10914 broad.mit.edu 37 14 97014212 97014212 + Missense_Mutation SNP T T A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CKB 1152 broad.mit.edu;mdanderson.org 37 14 103988669 103988669 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYFIP1 23191 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 22999456 22999456 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HERC2 8924 broad.mit.edu 37 15 28478879 28478879 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANP32AP1 723972 broad.mit.edu 37 15 35529895 35529895 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CASC5 57082 broad.mit.edu;mdanderson.org;bcgsc.ca 37 15 40916787 40916787 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RPAP1 26015 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 41814441 41814441 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM87A 25963 broad.mit.edu 37 15 42564314 42564314 + Frame_Shift_Del DEL T T - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GANC 2595 broad.mit.edu;mdanderson.org 37 15 42619597 42619597 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TP53BP1 7158 broad.mit.edu 37 15 43773188 43773188 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DUOX2 50506 broad.mit.edu;mdanderson.org;bcgsc.ca 37 15 45396231 45396231 + Missense_Mutation SNP G G A rs201955961 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBN1 2200 broad.mit.edu;ucsc.edu;mdanderson.org 37 15 48755319 48755319 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LMAN1L 79748 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 75108525 75108525 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MESDC1 59274 broad.mit.edu;ucsc.edu;mdanderson.org 37 15 81295560 81295560 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AGBL1 123624 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 86807816 86807816 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR4F15 390649 broad.mit.edu 37 15 102359272 102359272 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WASH3P 374666 broad.mit.edu 37 15 102516466 102516466 + RNA SNP C C G rs62635298 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSD1 23430 broad.mit.edu;ucsc.edu;mdanderson.org 37 16 1306310 1306311 + Silent DNP GC GC AT novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 GC GC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IFT140 9742 broad.mit.edu 37 16 1612076 1612076 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MSRB1 51734 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 1991404 1991404 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBL3 10607 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 2026870 2026870 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPL 5493 broad.mit.edu;mdanderson.org 37 16 4940317 4940317 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 METTL22 79091 broad.mit.edu 37 16 8729031 8729031 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIAA0430 9665 broad.mit.edu;ucsc.edu;mdanderson.org 37 16 15711251 15711251 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SYT17 51760 broad.mit.edu;mdanderson.org 37 16 19236099 19236099 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNAH3 55567 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 20996802 20996802 + Missense_Mutation SNP C C T rs200916697 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHP2 63928 broad.mit.edu 37 16 23767738 23767738 + Missense_Mutation SNP G G A rs79455352 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ASPHD1 253982 broad.mit.edu 37 16 29917204 29917204 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBX6 6911 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 30097724 30097724 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF40 9810 broad.mit.edu;mdanderson.org;bcgsc.ca 37 16 30777565 30777565 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SALL1 6299 broad.mit.edu 37 16 51173805 51173805 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC6A2 6530 broad.mit.edu;ucsc.edu;mdanderson.org 37 16 55690630 55690630 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PDPR 55066 broad.mit.edu 37 16 70164360 70164360 + Missense_Mutation SNP T T A rs201953730 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TAT 6898 broad.mit.edu 37 16 71602619 71602619 + Missense_Mutation SNP C C T rs137946175 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFHX3 463 broad.mit.edu 37 16 72822644 72822644 + Silent SNP C C T rs138129897 byfrequency;alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MON1B 22879 broad.mit.edu 37 16 77228770 77228770 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WFDC1 58189 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 84353088 84353088 + Missense_Mutation SNP C C T rs145066295 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PER1 5187 broad.mit.edu;ucsc.edu;mdanderson.org 37 17 8044491 8044491 + Silent SNP G G A rs199916672 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF222 643904 broad.mit.edu;mdanderson.org;bcgsc.ca 37 17 8296625 8296625 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC144C 348254 broad.mit.edu 37 17 20242798 20242798 + RNA SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO18A 399687 broad.mit.edu 37 17 27423863 27423863 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GIT1 28964 broad.mit.edu 37 17 27901911 27901911 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GPR179 440435 broad.mit.edu;mdanderson.org;bcgsc.ca 37 17 36499408 36499408 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SOCS7 30837 broad.mit.edu 37 17 36521270 36521270 + Silent SNP G G A rs149190855 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRTAP9-9 81870 broad.mit.edu;mdanderson.org 37 17 39411913 39411913 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIF18B 146909 broad.mit.edu;mdanderson.org 37 17 43004364 43004364 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NOG 9241 broad.mit.edu;bcgsc.ca 37 17 54672235 54672235 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR4D2 124538 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 56247381 56247381 + Missense_Mutation SNP G G A rs142058863 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 OR4D2 124538 broad.mit.edu;bcgsc.ca 37 17 56247407 56247407 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TANC2 26115 broad.mit.edu 37 17 61497780 61497780 + Silent SNP A A G rs200208895 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MGAT5B 146664 broad.mit.edu;bcgsc.ca 37 17 74901299 74901299 + Missense_Mutation SNP G G A rs199861646 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ENTHD2 146705 broad.mit.edu;mdanderson.org 37 17 79203107 79203107 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 THOC1 9984 broad.mit.edu;mdanderson.org 37 18 216576 216576 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ROCK1 6093 broad.mit.edu;mdanderson.org 37 18 18533573 18533573 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GREB1L 80000 broad.mit.edu;ucsc.edu;mdanderson.org 37 18 19070219 19070219 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TCEB3C 162699 broad.mit.edu 37 18 44554924 44554924 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ALPK2 115701 broad.mit.edu 37 18 56191246 56191246 + Silent SNP C C T rs145864025 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP9B 374868 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 18 76886295 76886295 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM108A1 81926 broad.mit.edu;mdanderson.org;bcgsc.ca 37 19 1881247 1881247 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SGTA 6449 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 2757763 2757763 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 S1PR4 8698 broad.mit.edu 37 19 3179323 3179323 + Missense_Mutation SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHAF1A 10036 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 4409549 4409549 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FUT6 2528 broad.mit.edu 37 19 5832569 5832569 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARHGEF18 23370 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 7521290 7521290 + Splice_Site SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBN3 84467 broad.mit.edu 37 19 8209801 8209801 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNMT1 1786 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 10246467 10246467 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF441 126068 broad.mit.edu 37 19 11891522 11891522 + Missense_Mutation SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF709 163051 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 12574914 12574914 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BEST2 54831 broad.mit.edu 37 19 12865478 12865478 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NFIX 4784 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 13183866 13183866 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NACC1 112939 broad.mit.edu;bcgsc.ca 37 19 13248350 13248350 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LPHN1 22859 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 14273936 14273936 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYP4F3 4051 broad.mit.edu 37 19 15752327 15752327 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AP1M1 8907 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 16345014 16345014 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF737 100129842 broad.mit.edu;mdanderson.org;bcgsc.ca 37 19 20735292 20735292 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD27 84079 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 33137475 33137475 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MLL4 8085 broad.mit.edu 37 19 36210431 36210431 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR62 284403 broad.mit.edu 37 19 36592604 36592604 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF569 148266 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 37916858 37916858 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAP4K1 11184 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 39090577 39090577 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FCGBP 8857 broad.mit.edu;mdanderson.org 37 19 40368741 40368741 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CNTD2 79935 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 40730407 40730407 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYP2B7P1 1556 broad.mit.edu 37 19 41442033 41442033 + RNA SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF234 10780 broad.mit.edu;mdanderson.org;bcgsc.ca 37 19 44661482 44661482 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CEACAM16 388551 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 45207383 45207383 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BCL3 602 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 45262838 45262838 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PVRL2 5819 broad.mit.edu 37 19 45375403 45375403 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RSPH6A 81492 broad.mit.edu;ucsc.edu 37 19 46308230 46308230 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SIGLEC16 400709 broad.mit.edu 37 19 50475120 50475120 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF473 25888 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 50548036 50548036 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LRRC4B 94030 broad.mit.edu 37 19 51021776 51021776 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF616 90317 broad.mit.edu;mdanderson.org 37 19 52619951 52619951 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF534 147658 broad.mit.edu 37 19 52941908 52941908 + Nonsense_Mutation SNP C C T rs199880338 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIR3DL3 115653 broad.mit.edu;mdanderson.org;bcgsc.ca 37 19 55239156 55239156 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SSC5D 284297 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 56024455 56024455 + Missense_Mutation SNP G G A rs201884176 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SSC5D 284297 broad.mit.edu 37 19 56024481 56024481 + Silent SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZIM3 114026 broad.mit.edu 37 19 57647366 57647366 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF773 374928 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 58017797 58017797 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GDF7 151449 broad.mit.edu 37 2 20871061 20871061 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CRIM1 51232 broad.mit.edu 37 2 36691711 36691711 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPM1B 5495 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 44428691 44428691 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPTBN1 6711 broad.mit.edu 37 2 54876812 54876812 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RTN4 57142 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 55254295 55254295 + Missense_Mutation SNP C C T rs144622313 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DYSF 8291 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 71887760 71887760 + Missense_Mutation SNP C C T rs144383140 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TET3 200424 broad.mit.edu;ucsc.edu;mdanderson.org 37 2 74327959 74327959 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LYG2 254773 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 99860551 99860551 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IL1R1 3554 broad.mit.edu;mdanderson.org;bcgsc.ca 37 2 102789203 102789203 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MALL 7851 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 110849317 110849317 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BIN1 274 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 127810999 127810999 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO7B 4648 broad.mit.edu;bcgsc.ca 37 2 128324245 128324245 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LCT 3938 broad.mit.edu;bcgsc.ca 37 2 136547323 136547323 + Missense_Mutation SNP G G A rs183725992 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 XIRP2 129446 broad.mit.edu 37 2 168100185 168100185 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 METTL8 79828 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 172182369 172182369 + Missense_Mutation SNP C C G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HSPD1 3329 broad.mit.edu;bcgsc.ca 37 2 198353083 198353083 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NBEAL1 65065 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 204002940 204002940 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOCK10 55619 broad.mit.edu 37 2 225684245 225684245 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C2orf57 165100 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 232458786 232458786 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SNRPB 6628 broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 2442418 2442418 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRNP 5621 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 4680473 4680473 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C20orf196 149840 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 5843951 5843951 + Missense_Mutation SNP C C T rs140278441 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RALGAPA2 57186 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 20475759 20475759 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SYNDIG1 79953 broad.mit.edu;mdanderson.org 37 20 24524119 24524119 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SOGA1 140710 broad.mit.edu;mdanderson.org 37 20 35467800 35467800 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SULF2 55959 broad.mit.edu 37 20 46365622 46365622 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNB1 3745 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 48098552 48098552 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMEM189 387521 broad.mit.edu;mdanderson.org 37 20 48744630 48744630 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM65C 140876 broad.mit.edu 37 20 49218734 49218734 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BMP7 655 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 55803427 55803427 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PMEPA1 56937 broad.mit.edu;mdanderson.org;bcgsc.ca 37 20 56227600 56227600 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NKAIN4 128414 broad.mit.edu;mdanderson.org 37 20 61878938 61878938 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF512B 57473 broad.mit.edu;ucsc.edu;mdanderson.org 37 20 62598240 62598240 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCT8L2 150160 broad.mit.edu;mdanderson.org;bcgsc.ca 37 22 17072519 17072519 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PI4KA 5297 broad.mit.edu;mdanderson.org 37 22 21082095 21082095 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF280A 129025 broad.mit.edu;bcgsc.ca 37 22 22868961 22868961 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ADORA2A 135 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 24836835 24836835 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHEK2 11200 broad.mit.edu;mdanderson.org;bcgsc.ca 37 22 29091740 29091740 + Missense_Mutation SNP C C T rs200649225 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GAL3ST1 9514 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 30951743 30951743 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EIF4ENIF1 56478 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 31843508 31843508 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RFPL2 10739 broad.mit.edu;bcgsc.ca 37 22 32587274 32587274 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PDXP 57026 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 38061706 38061706 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRIOBP 11078 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 38153951 38153951 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYP2D6 1565 broad.mit.edu;mdanderson.org;bcgsc.ca 37 22 42525053 42525053 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POLDIP3 84271 broad.mit.edu 37 22 42987962 42987962 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C22orf34 348645 broad.mit.edu;ucsc.edu;mdanderson.org 37 22 50018190 50018190 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PANX2 56666 broad.mit.edu 37 22 50617544 50617544 + Silent SNP G G A rs114447696 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TUBGCP6 85378 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 50664592 50664592 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARSA 410 broad.mit.edu 37 22 51064679 51064679 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRNT1 51095 broad.mit.edu 37 3 3179092 3179092 + Silent SNP G G C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC6A11 6538 broad.mit.edu;ucsc.edu;mdanderson.org 37 3 10960101 10960101 + Silent SNP C C T rs144421280 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CTNNB1 1499 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 41266964 41266964 + Missense_Mutation SNP G G A rs200890083 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM198A 729085 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 43074842 43074842 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLXNB1 5364 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 48462160 48462160 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IMPDH2 3615 broad.mit.edu 37 3 49061970 49061970 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BSN 8927 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 49694040 49694040 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MST1R 4486 broad.mit.edu;mdanderson.org 37 3 49940431 49940431 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACNA1D 776 broad.mit.edu;ucsc.edu;mdanderson.org 37 3 53757945 53757945 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLMAP 7871 broad.mit.edu 37 3 57843846 57843846 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LMOD3 56203 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 69168210 69168210 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPP4R2 151987 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 73096446 73096446 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HTR1F 3355 broad.mit.edu;bcgsc.ca 37 3 88040986 88040986 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EPHA3 2042 broad.mit.edu;bcgsc.ca 37 3 89498501 89498501 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CRYBG3 131544 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 97607247 97607247 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PARP14 54625 broad.mit.edu;ucsc.edu;mdanderson.org 37 3 122420029 122420029 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC14 64770 broad.mit.edu 37 3 123675252 123675252 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KALRN 8997 broad.mit.edu;bcgsc.ca 37 3 123946899 123946899 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MCM2 4171 broad.mit.edu;bcgsc.ca 37 3 127339608 127339608 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNAJC13 23317 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 132172979 132172979 + Missense_Mutation SNP C C T rs147315244 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DNAJC13 23317 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 132221145 132221145 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C3orf58 205428 broad.mit.edu 37 3 143691481 143691481 + Missense_Mutation SNP G G C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TM4SF1 4071 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 149093475 149093475 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDR49 151790 broad.mit.edu 37 3 167272531 167272531 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCUN1D1 54165 broad.mit.edu 37 3 182681755 182681755 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DGKG 1608 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 185993360 185993360 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TACC3 10460 broad.mit.edu 37 4 1746487 1746487 + Silent SNP G G A rs148572882 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HTT 3064 broad.mit.edu;ucsc.edu;mdanderson.org 37 4 3107131 3107131 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SORCS2 57537 broad.mit.edu 37 4 7725501 7725501 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLIT2 9353 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 20533609 20533609 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCKAR 886 broad.mit.edu;mdanderson.org;bcgsc.ca 37 4 26483646 26483646 + Missense_Mutation SNP A A C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTTG2 10744 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 37962188 37962188 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SHROOM3 57619 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 77691990 77691990 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WDFY3 23001 broad.mit.edu 37 4 85758218 85758218 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ADH1C 126 broad.mit.edu 37 4 100268909 100268909 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAT4 79633 broad.mit.edu 37 4 126389786 126389786 + Missense_Mutation SNP A A G rs183593425 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCHS2 54798 broad.mit.edu 37 4 155163876 155163876 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DCHS2 54798 broad.mit.edu;ucsc.edu;mdanderson.org 37 4 155254036 155254036 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FGB 2244 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 155487066 155487066 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM198B 51313 broad.mit.edu;ucsc.edu;mdanderson.org 37 4 159076877 159076877 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GALNT7 51809 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 174169387 174169387 + Missense_Mutation SNP G G A rs201773910 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 F11 2160 broad.mit.edu;mdanderson.org;bcgsc.ca 37 4 187209727 187209727 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAT1 2195 broad.mit.edu;ucsc.edu;mdanderson.org 37 4 187629557 187629557 + Silent SNP G G A rs202036099 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TERT 7015 broad.mit.edu 37 5 1293799 1293799 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ADAMTS16 170690 broad.mit.edu;mdanderson.org;bcgsc.ca 37 5 5239898 5239898 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NIPBL 25836 broad.mit.edu;mdanderson.org;bcgsc.ca 37 5 37000622 37000622 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ACTBL2 345651 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 56777945 56777945 + Missense_Mutation SNP C C T rs149395843 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 THBS4 7060 broad.mit.edu 37 5 79366537 79366537 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 XRCC4 7518 broad.mit.edu;mdanderson.org;bcgsc.ca 37 5 82499423 82499423 + Missense_Mutation SNP C C T rs140143447 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD32 84250 broad.mit.edu 37 5 94005883 94005883 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 YTHDC2 64848 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 112902857 112902857 + Missense_Mutation SNP G G A rs149048625 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DMXL1 1657 broad.mit.edu;mdanderson.org;bcgsc.ca 37 5 118500256 118500256 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NRG2 9542 broad.mit.edu;ucsc.edu;mdanderson.org 37 5 139251392 139251392 + Silent SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKHD1 54882 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 139815782 139815782 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHA6 56142 broad.mit.edu 37 5 140209042 140209042 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHGB2 56103 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 140740942 140740942 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHGB3 56102 broad.mit.edu 37 5 140750096 140750096 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RELL2 285613 broad.mit.edu 37 5 141019122 141019122 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PPARGC1B 133522 broad.mit.edu 37 5 149212386 149212386 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GALNT10 55568 broad.mit.edu;mdanderson.org 37 5 153795447 153795447 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLIT3 6586 broad.mit.edu;ucsc.edu;mdanderson.org 37 5 168096804 168096804 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEURL1B 54492 broad.mit.edu 37 5 172113866 172113866 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MAML1 9794 broad.mit.edu;mdanderson.org 37 5 179192794 179192794 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LINC00518 221718 broad.mit.edu 37 6 10430027 10430027 + RNA SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 USP49 25862 broad.mit.edu;mdanderson.org;bcgsc.ca 37 6 41767668 41767668 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD66 100287718 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 46726491 46726491 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TINAG 27283 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 54214609 54214609 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COL21A1 81578 broad.mit.edu 37 6 56044473 56044473 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DST 667 broad.mit.edu 37 6 56335939 56335939 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CNR1 1268 broad.mit.edu 37 6 88853689 88853689 + Silent SNP G G A rs75641625 bycluster;byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRDM1 639 broad.mit.edu;mdanderson.org 37 6 106553250 106553250 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TIAM2 26230 broad.mit.edu;ucsc.edu;mdanderson.org 37 6 155450720 155450720 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PARK2 5071 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 162206903 162206903 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AP5Z1 9907 broad.mit.edu 37 7 4830934 4830934 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYTH3 9265 broad.mit.edu;mdanderson.org 37 7 6217521 6217521 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DGKB 1607 broad.mit.edu 37 7 14620499 14620499 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HDAC9 9734 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 18975462 18975462 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GARS 2617 broad.mit.edu;ucsc.edu;mdanderson.org 37 7 30662010 30662010 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BMPER 168667 broad.mit.edu;bcgsc.ca 37 7 34006162 34006162 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UPP1 7378 broad.mit.edu 37 7 48134391 48134391 + Missense_Mutation SNP C C T rs11971829 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GTF2IRD2P1 401375 broad.mit.edu 37 7 72657436 72657436 + RNA SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SRCRB4D 136853 broad.mit.edu;mdanderson.org 37 7 76024631 76024631 + Silent SNP C C T rs139627347 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SRCRB4D 136853 broad.mit.edu;bcgsc.ca 37 7 76030355 76030355 + Missense_Mutation SNP C C T rs77067369 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACNA2D1 781 broad.mit.edu;bcgsc.ca 37 7 81620513 81620513 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 STEAP2 261729 broad.mit.edu;ucsc.edu;mdanderson.org 37 7 89854552 89854552 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AKAP9 10142 broad.mit.edu;mdanderson.org;bcgsc.ca 37 7 91631833 91631833 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CDK6 1021 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 92252390 92252390 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COPS6 10980 broad.mit.edu 37 7 99688529 99688529 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NYAP1 222950 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 100085892 100085892 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZAN 7455 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 100334486 100334486 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC12A9 56996 broad.mit.edu;bcgsc.ca 37 7 100453339 100453339 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FBXL13 222235 broad.mit.edu;ucsc.edu;mdanderson.org 37 7 102566787 102566787 + Missense_Mutation SNP G G A rs150674888 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GRM8 2918 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 126173105 126173105 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ASIC3 9311 broad.mit.edu;mdanderson.org 37 7 150747623 150747623 + Silent SNP G G A rs149333074 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYOM2 9172 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 2033488 2033488 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP6V1B2 526 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 20070346 20070346 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEFL 4747 broad.mit.edu 37 8 24813771 24813771 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCTD9 54793 broad.mit.edu 37 8 25296836 25296836 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PBK 55872 broad.mit.edu;mdanderson.org;bcgsc.ca 37 8 27679912 27679912 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 WRN 7486 broad.mit.edu 37 8 30924630 30924630 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF5P1 286140 broad.mit.edu 37 8 38458285 38458285 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C8orf34 116328 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 69380981 69380981 + Missense_Mutation SNP G G A rs142064557 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EYA1 2138 broad.mit.edu;ucsc.edu;mdanderson.org 37 8 72129051 72129051 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFHX4 79776 broad.mit.edu 37 8 77763332 77763332 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AZIN1 51582 broad.mit.edu;mdanderson.org 37 8 103848546 103848546 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SYBU 55638 broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 110587782 110587782 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZHX2 22882 broad.mit.edu;ucsc.edu;mdanderson.org 37 8 123964437 123964437 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MROH5 389690 broad.mit.edu;ucsc.edu;mdanderson.org 37 8 142477562 142477562 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BAI1 575 broad.mit.edu 37 8 143566068 143566068 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 LRRC14 9684 broad.mit.edu;mdanderson.org;bcgsc.ca 37 8 145746758 145746758 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SMARCA2 6595 broad.mit.edu;mdanderson.org 37 9 2191375 2191375 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTPRD 5789 broad.mit.edu 37 9 8507359 8507359 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLIN2 123 broad.mit.edu;mdanderson.org;bcgsc.ca 37 9 19121114 19121114 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTENP1 11191 broad.mit.edu 37 9 33676393 33676393 + RNA SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UNC13B 10497 broad.mit.edu;mdanderson.org;bcgsc.ca 37 9 35396917 35396917 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CREB3 10488 broad.mit.edu 37 9 35736467 35736467 + Missense_Mutation SNP C C T rs190901541 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CNTNAP3 79937 broad.mit.edu 37 9 39177437 39177437 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRUNE2 158471 broad.mit.edu 37 9 79322501 79322501 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC28A3 64078 broad.mit.edu 37 9 86895780 86895780 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TEX10 54881 broad.mit.edu;ucsc.edu;mdanderson.org 37 9 103064527 103064527 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MRPL50 54534 broad.mit.edu;mdanderson.org;bcgsc.ca 37 9 104153053 104153053 + Nonsense_Mutation SNP G G A rs150313404 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NEK6 10783 broad.mit.edu;ucsc.edu 37 9 127064218 127064218 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZBTB34 403341 broad.mit.edu;mdanderson.org 37 9 129641862 129641862 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GTF3C5 9328 broad.mit.edu;ucsc.edu;mdanderson.org 37 9 135919149 135919149 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RABL6 55684 broad.mit.edu;mdanderson.org 37 9 139730292 139730292 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ABCA2 20 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 139915957 139915957 + Nonsense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF208 727800 broad.mit.edu;bcgsc.ca 37 9 140115390 140115390 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARSH 347527 broad.mit.edu 37 X 2933300 2933300 + Silent SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CCDC22 28952 broad.mit.edu;mdanderson.org 37 X 49106626 49106626 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HUWE1 10075 broad.mit.edu;bcgsc.ca 37 X 53615355 53615355 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PHF8 23133 broad.mit.edu;mdanderson.org 37 X 54012317 54012317 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EDA2R 60401 broad.mit.edu 37 X 65819457 65819457 + Missense_Mutation SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ERCC6L 54821 broad.mit.edu 37 X 71425000 71425000 + Missense_Mutation SNP C C T rs140225715 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC16A2 6567 broad.mit.edu;bcgsc.ca 37 X 73744294 73744294 + Missense_Mutation SNP C C T rs201194222 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATRX 546 broad.mit.edu 37 X 76888847 76888847 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HDX 139324 broad.mit.edu 37 X 83599463 83599463 + Silent SNP A A C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TEX13A 56157 broad.mit.edu 37 X 104463685 104463685 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TBC1D8B 54885 broad.mit.edu;mdanderson.org;bcgsc.ca 37 X 106070529 106070529 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ATP11C 286410 broad.mit.edu;mdanderson.org 37 X 138884415 138884415 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PLXNB3 5365 broad.mit.edu 37 X 153037418 153037418 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MECP2 4204 broad.mit.edu;mdanderson.org;bcgsc.ca 37 X 153296438 153296438 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 F8 2157 broad.mit.edu;mdanderson.org;bcgsc.ca 37 X 154197604 154197604 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 STK10 6793 broad.mit.edu 37 5 171482625 171482626 + Frame_Shift_Ins INS - - C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AP1M2 10053 ucsc.edu;mdanderson.org;bcgsc.ca 37 19 10692022 10692022 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AQP1 358 ucsc.edu;mdanderson.org 37 7 30951659 30951659 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BRD1 23774 ucsc.edu 37 22 50217223 50217223 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C17orf76-AS1 125144 ucsc.edu 37 17 16342646 16342646 + RNA SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CACNA1B 774 ucsc.edu;mdanderson.org 37 9 140865971 140865971 + Silent SNP C C T rs78326958 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CDC42BPA 8476 ucsc.edu;bcgsc.ca 37 1 227504801 227504801 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CDK5RAP3 80279 ucsc.edu 37 17 46053334 46053334 + Silent SNP A A G rs202125432 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CEP250 11190 ucsc.edu;mdanderson.org;bcgsc.ca 37 20 34050290 34050290 + Missense_Mutation SNP A A C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CST5 1473 ucsc.edu;mdanderson.org;bcgsc.ca 37 20 23858242 23858242 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYP27B1 1594 ucsc.edu;mdanderson.org 37 12 58160795 58160795 + Missense_Mutation SNP T T G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EMCN 51705 ucsc.edu;mdanderson.org 37 4 101386644 101386644 + Silent SNP G G A rs115243972 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAT3 120114 ucsc.edu;mdanderson.org;bcgsc.ca 37 11 92577151 92577151 + Nonsense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FGFRL1 53834 ucsc.edu 37 4 1017489 1017489 + Missense_Mutation SNP A A C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ITSN1 6453 ucsc.edu;mdanderson.org;bcgsc.ca 37 21 35260567 35260567 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MED9 55090 ucsc.edu 37 17 17380564 17380564 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MS4A15 219995 ucsc.edu;mdanderson.org;bcgsc.ca 37 11 60535105 60535105 + Missense_Mutation SNP G G A rs76307175 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYH13 8735 ucsc.edu;mdanderson.org 37 17 10267836 10267836 + Silent SNP G G A rs34042358 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NACA 4666 ucsc.edu;mdanderson.org 37 12 57114975 57114975 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NT5C1B 93034 ucsc.edu;mdanderson.org 37 2 18745215 18745215 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PJA2 9867 ucsc.edu;mdanderson.org 37 5 108714549 108714549 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POR 5447 ucsc.edu;mdanderson.org;bcgsc.ca 37 7 75608803 75608803 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RAB3GAP1 22930 ucsc.edu 37 2 135920123 135920123 + Splice_Site SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RASAL1 8437 ucsc.edu 37 12 113554915 113554915 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RNF10 9921 ucsc.edu;mdanderson.org;bcgsc.ca 37 12 121000814 121000814 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SCARB1 949 ucsc.edu 37 12 125263104 125263104 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SCGB3A1 92304 ucsc.edu;bcgsc.ca 37 5 180017682 180017682 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SEPT4 5414 ucsc.edu;bcgsc.ca 37 17 56599003 56599003 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC39A7 7922 ucsc.edu;mdanderson.org 37 6 33169433 33169433 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SPAG4 6676 ucsc.edu 37 20 34207645 34207645 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 STAT1 6772 ucsc.edu;bcgsc.ca 37 2 191848415 191848415 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SUPT3H 8464 ucsc.edu;mdanderson.org;bcgsc.ca 37 6 45290634 45290634 + Missense_Mutation SNP G G A rs9472463 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TOR3A 64222 ucsc.edu;mdanderson.org 37 1 179057117 179057117 + Silent SNP G G A rs12092348 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSD1 23430 ucsc.edu;mdanderson.org 37 16 1306954 1306954 + Silent SNP C C G rs61729110 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSD1 23430 ucsc.edu;bcgsc.ca 37 16 1306961 1306961 + Missense_Mutation SNP A A G rs139077060 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSD1 23430 ucsc.edu;mdanderson.org;bcgsc.ca 37 16 1306973 1306973 + Missense_Mutation SNP A A G rs79313952 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TRIM34 53840 ucsc.edu 37 11 5655127 5655127 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TYK2 7297 ucsc.edu;mdanderson.org;bcgsc.ca 37 19 10477123 10477123 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UVSSA 57654 ucsc.edu 37 4 1377724 1377724 + Missense_Mutation SNP G G A rs139310992 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZBTB49 166793 ucsc.edu;mdanderson.org 37 4 4322722 4322722 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF653 115950 ucsc.edu;mdanderson.org;bcgsc.ca 37 19 11598527 11598527 + Missense_Mutation SNP C C T rs140179197 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ACAP3 116983 mdanderson.org 37 1 1229953 1229953 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AGAP6 414189 mdanderson.org 37 10 51748684 51748684 + Missense_Mutation SNP G G A rs77235195 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AK2 204 mdanderson.org 37 1 33478959 33478959 + Missense_Mutation SNP C C G rs72884305 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ALDH1L2 160428 mdanderson.org 37 12 105464485 105464485 + Silent SNP G G A rs74449999 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ALG1 56052 mdanderson.org 37 16 5129069 5129069 + Silent SNP C C T rs144029725 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD30BL 554226 mdanderson.org 37 2 132919171 132919171 + RNA SNP A A G rs199695856 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ANKRD30BL 554226 mdanderson.org 37 2 132919192 132919192 + RNA SNP G G A rs111295191 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BCORL1 63035 mdanderson.org;bcgsc.ca 37 X 129190044 129190044 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 BDNF 627 mdanderson.org 37 11 27681033 27681033 + RNA SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C16orf3 750 mdanderson.org 37 16 90095596 90095597 + Missense_Mutation DNP AT AT GC rs61118444 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 AT AT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 C6orf165 154313 mdanderson.org;bcgsc.ca 37 6 88173817 88173817 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CEP170B 283638 mdanderson.org 37 14 105354293 105354293 + Silent SNP A A G rs2582548 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CHRNA7 1139 mdanderson.org 37 15 32460285 32460285 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CPEB3 22849 mdanderson.org 37 10 93999850 93999850 + Silent SNP A A G rs3824734 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CROCC 9696 mdanderson.org 37 1 17270751 17270751 + Silent SNP G G A rs12025984 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CXorf22 170063 mdanderson.org;bcgsc.ca 37 X 35944236 35944236 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 CYP3A5 1577 mdanderson.org;bcgsc.ca 37 7 99247772 99247772 + Missense_Mutation SNP A A G rs41279854 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 E4F1 1877 mdanderson.org 37 16 2282184 2282184 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 EP400NL 347918 mdanderson.org 37 12 132589038 132589038 + RNA SNP A A G rs61744079 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ERN2 10595 mdanderson.org 37 16 23702743 23702743 + Missense_Mutation SNP C C T rs144279415 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FRG1 2483 mdanderson.org 37 4 190876227 190876227 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HLA-B 3106 mdanderson.org 37 6 31324176 31324176 + Silent SNP C C G rs12721836 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 IFRD2 7866 mdanderson.org 37 3 50329826 50329826 + Silent SNP A A G rs1076872 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KCNE1 3753 mdanderson.org 37 21 35821711 35821711 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KIF19 124602 mdanderson.org 37 17 72350412 72350412 + Missense_Mutation SNP G G A rs2271535 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRT6A 3853 mdanderson.org 37 12 52882315 52882315 + Silent SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRTAP4-11 653240 mdanderson.org 37 17 39274319 39274319 + Missense_Mutation SNP G G C rs199712484 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 KRTAP4-11 653240 mdanderson.org 37 17 39274364 39274364 + Missense_Mutation SNP T T G rs425784 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MRPS30 10884 mdanderson.org 37 5 44811198 44811198 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MUC5B 727897 mdanderson.org 37 11 1266696 1266696 + Silent SNP A A C rs4046509 bycluster;byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MYO5B 4645 mdanderson.org 37 18 47363927 47363927 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NBPF10 100132406 mdanderson.org 37 1 145299824 145299824 + Missense_Mutation SNP C C G rs9424711 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 NUDT12 83594 mdanderson.org 37 5 102895830 102895830 + Silent SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PCDHB8 56128 mdanderson.org 37 5 140559320 140559320 + Missense_Mutation SNP G G A rs78133980 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POLM 27434 mdanderson.org 37 7 44121936 44121936 + Silent SNP C C A rs3218655 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POM121 9883 mdanderson.org 37 7 72413243 72413243 + Missense_Mutation SNP A A C rs437678 bycluster;byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 POM121L1P 25812 mdanderson.org 37 22 22986764 22986764 + RNA SNP G G C rs62228122 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRSS1 5644 mdanderson.org 37 7 142460764 142460764 + Missense_Mutation SNP G G A rs200902389 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PRSS1 5644 mdanderson.org 37 7 142460778 142460778 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RAB44 401258 mdanderson.org;bcgsc.ca 37 6 36695383 36695383 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RADIL 55698 mdanderson.org 37 7 4876100 4876100 + Silent SNP G G A rs138811640 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RASGRF1 5923 mdanderson.org;bcgsc.ca 37 15 79324607 79324607 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RERE 473 mdanderson.org 37 1 8421203 8421203 + Silent SNP T T C rs13596 bycluster;byfrequency;by2hit2allele;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RTEL1 51750 mdanderson.org 37 20 62322288 62322288 + Silent SNP T T C rs3208007 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RUNX2 860 mdanderson.org 37 6 45459753 45459753 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SBNO2 22904 mdanderson.org 37 19 1116911 1116911 + Silent SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SH3GLB1 51100 mdanderson.org 37 1 87181510 87181510 + Missense_Mutation SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SLC35G5 83650 mdanderson.org 37 8 11189403 11189403 + Missense_Mutation SNP C C A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SRP72 6731 mdanderson.org;bcgsc.ca 37 4 57344581 57344581 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SSMEM1 0 mdanderson.org;bcgsc.ca 37 7 129855843 129855843 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSD1 23430 mdanderson.org 37 16 1306802 1306802 + Missense_Mutation SNP A A G rs2401930 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UMODL1 89766 mdanderson.org 37 21 43531403 43531403 + Missense_Mutation SNP C C G rs220127 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 USP6 9098 mdanderson.org 37 17 5044784 5044784 + Silent SNP T T C novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF628 89887 mdanderson.org 37 19 55995597 55995597 + Missense_Mutation SNP G G A novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF835 90485 mdanderson.org 37 19 57175578 57175578 + Missense_Mutation SNP C C T rs12610410 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZSWIM4 65249 mdanderson.org 37 19 13936443 13936443 + Silent SNP G G A rs202144110 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 AXDND1 126859 bcgsc.ca 37 1 179494566 179494569 + Frame_Shift_Del DEL AAAG AAAG - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 AAAG AAAG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MUC5B 727897 bcgsc.ca 37 11 1266716 1266716 + Missense_Mutation SNP T T C rs80150964 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 JAM3 83700 bcgsc.ca 37 11 134009776 134009776 + Missense_Mutation SNP C C A rs143947882 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TMPO 7112 bcgsc.ca 37 12 98931296 98931296 + Missense_Mutation SNP G G T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 RB1 5925 bcgsc.ca 37 13 49033916 49033916 + Frame_Shift_Del DEL C C - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 TPSD1 23430 bcgsc.ca 37 16 1306310 1306310 + Missense_Mutation SNP G G A rs201494832 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 DOK6 220164 bcgsc.ca 37 18 67406218 67406218 + Missense_Mutation SNP A A G novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZNF799 90576 bcgsc.ca 37 19 12502787 12502787 + Missense_Mutation SNP G G A rs12974755 byfrequency TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ZFP36 7538 bcgsc.ca 37 19 39899072 39899072 + Frame_Shift_Del DEL C C - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 FAM178B 51252 bcgsc.ca 37 2 97568436 97568436 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 COBLL1 22837 bcgsc.ca 37 2 165578973 165578973 + Frame_Shift_Del DEL A A - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 PTPN13 5783 bcgsc.ca 37 4 87728796 87728796 + Missense_Mutation SNP T T C rs199502086 alternate_allele TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 HAVCR1 26762 bcgsc.ca 37 5 156479590 156479590 + Missense_Mutation SNP G G A rs114193906 byfrequency;by1000genomes TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 GABRA6 2559 bcgsc.ca 37 5 161119027 161119027 + Missense_Mutation SNP A A G rs142999297 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MICB 4277 bcgsc.ca 37 6 31475183 31475183 + Missense_Mutation SNP C C T rs45470602 TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 SCML4 256380 bcgsc.ca 37 6 108042039 108042039 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 UBN2 254048 bcgsc.ca 37 7 138969009 138969011 + In_Frame_Del DEL CAG CAG - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 CAG CAG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 ARHGEF39 84904 bcgsc.ca 37 9 35664389 35664390 + Frame_Shift_Del DEL CT CT - novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 CT CT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MURC 347273 bcgsc.ca 37 9 103348063 103348063 + Missense_Mutation SNP C C T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 MSH6 2956 bcgsc.ca 37 2 48030692 48030693 + Frame_Shift_Ins INS - - T novel TCGA-KN-8428-01A-11D-2310-10 TCGA-KN-8428-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93 322f0b01-2118-4dbe-aba1-3875a54ee71b 7a9405f5-81bf-4879-abfe-2688b8f3ca93