Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID BACE1 23621 broad.mit.edu;hgsc.bcm.edu 37 11 117163878 117163880 + In_Frame_Del DEL CAG CAG - novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 CAG CAG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 TP53 7157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 7578396 7578396 + Missense_Mutation SNP G G T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 CACNA1A 773 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 19 13340907 13340907 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 TIAM1 7074 broad.mit.edu;hgsc.bcm.edu 37 21 32624307 32624307 + Missense_Mutation SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 SPEG 10290 hgsc.bcm.edu;ucsc.edu 37 2 220354242 220354242 + Silent SNP G G A rs148685205 by1000genomes TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 HEATR7B2 133558 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 5 41045851 41045851 + Silent SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ELFN1 392617 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 1785380 1785380 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MLLT3 4300 hgsc.bcm.edu 37 9 20414341 20414343 + In_Frame_Del DEL CTA CTA - novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 CTA CTA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 AMPD2 271 broad.mit.edu 37 1 110169839 110169839 + Missense_Mutation SNP A A G novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MSRB2 22921 broad.mit.edu 37 10 23399207 23399207 + Missense_Mutation SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MTA2 9219 broad.mit.edu 37 11 62367694 62367694 + Missense_Mutation SNP A A G novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 DMXL2 23312 broad.mit.edu 37 15 51787229 51787229 + Missense_Mutation SNP A A G novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 CHTF18 63922 broad.mit.edu 37 16 840180 840180 + Missense_Mutation SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ATAD5 79915 broad.mit.edu 37 17 29161986 29161986 + Missense_Mutation SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 BPTF 2186 broad.mit.edu;mdanderson.org 37 17 65889530 65889530 + Silent SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 SPINT2 10653 broad.mit.edu;mdanderson.org 37 19 38782514 38782514 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 USP29 57663 broad.mit.edu;mdanderson.org;bcgsc.ca 37 19 57641826 57641826 + Missense_Mutation SNP G G A rs141050797 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 FBXO41 150726 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 73493739 73493739 + Missense_Mutation SNP T T G novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 TMEM127 55654 broad.mit.edu 37 2 96920609 96920609 + Missense_Mutation SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 INPP4A 3631 broad.mit.edu;mdanderson.org 37 2 99163146 99163146 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 TUBA4A 7277 broad.mit.edu 37 2 220115802 220115802 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 SEPT2 4735 broad.mit.edu;ucsc.edu;mdanderson.org 37 2 242283310 242283310 + Silent SNP C C A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 IFNAR1 3454 broad.mit.edu 37 21 34727798 34727798 + Silent SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 DIP2A 23181 broad.mit.edu 37 21 47970588 47970588 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 NAGA 4668 broad.mit.edu;ucsc.edu;mdanderson.org 37 22 42456379 42456379 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 RFT1 91869 broad.mit.edu 37 3 53139767 53139767 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ALCAM 214 broad.mit.edu 37 3 105269023 105269023 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 PARP14 54625 broad.mit.edu 37 3 122433231 122433231 + Frame_Shift_Del DEL G G - novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC4 4585 broad.mit.edu 37 3 195507051 195507051 + Silent SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC4 4585 broad.mit.edu 37 3 195507059 195507059 + Missense_Mutation SNP T T C rs76367261 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 CEP19 84984 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 196434505 196434505 + Missense_Mutation SNP C C A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 PRKAA1 5562 broad.mit.edu 37 5 40775606 40775606 + Splice_Site SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ZSWIM6 57688 broad.mit.edu 37 5 60822118 60822118 + Missense_Mutation SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 AGGF1 55109 broad.mit.edu 37 5 76358967 76358967 + Frame_Shift_Del DEL A A - novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 DHFR 1719 broad.mit.edu;mdanderson.org 37 5 79945302 79945302 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ATXN1 6310 broad.mit.edu 37 6 16326646 16326646 + Silent SNP G G A novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 FAM86B2 653333 broad.mit.edu;mdanderson.org;bcgsc.ca 37 8 12287958 12287958 + Missense_Mutation SNP G G T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 NOTCH1 4851 broad.mit.edu;mdanderson.org;bcgsc.ca 37 9 139395222 139395222 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 HEXA 3073 broad.mit.edu 37 15 72640036 72640037 + Frame_Shift_Ins INS - - T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 SRRM3 222183 broad.mit.edu 37 7 75914932 75914933 + Splice_Site INS - - C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 CLCA4 22802 ucsc.edu 37 1 87045902 87045902 + Silent SNP A A T rs1932809 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ESPN 83715 ucsc.edu;bcgsc.ca 37 1 6512010 6512010 + Missense_Mutation SNP A A G novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 GRB7 2886 ucsc.edu 37 17 37901742 37901742 + Missense_Mutation SNP A A G novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 INPP5F 22876 ucsc.edu 37 10 121587065 121587065 + Missense_Mutation SNP T T C rs148162878 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 PARS2 25973 ucsc.edu 37 1 55224826 55224826 + Silent SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 SCN3A 6328 ucsc.edu 37 2 166032778 166032778 + Missense_Mutation SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 VWF 7450 ucsc.edu 37 12 6181608 6181608 + Missense_Mutation SNP T T C novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ANKRD20A5P 440482 mdanderson.org 37 18 14183978 14183978 + RNA SNP T T C rs77403707 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 BDNF 627 mdanderson.org;bcgsc.ca 37 11 27679447 27679447 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 EIF5AL1 143244 mdanderson.org 37 10 81272627 81272627 + Silent SNP G G A rs75496770 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 FAM86B1 85002 mdanderson.org 37 8 12042969 12042969 + Missense_Mutation SNP G G A rs201172089 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 FANCD2 2177 mdanderson.org 37 3 10114944 10114944 + Missense_Mutation SNP A A C rs61744531 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 FOXD4L1 200350 mdanderson.org 37 2 114257162 114257162 + Missense_Mutation SNP A A C rs201655302 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 HEATR2 54919 mdanderson.org 37 7 814788 814788 + Missense_Mutation SNP G G A rs3922641 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 KRTAP10-2 386679 mdanderson.org 37 21 45971152 45971152 + Missense_Mutation SNP G G A rs199607801 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MLL3 58508 mdanderson.org 37 7 151932990 151932990 + Missense_Mutation SNP C C T rs76844681 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC16 94025 mdanderson.org 37 19 8999395 8999395 + Missense_Mutation SNP T T C rs200813849 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC16 94025 mdanderson.org 37 19 9002587 9002587 + Missense_Mutation SNP C C T rs201053591 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC16 94025 mdanderson.org 37 19 9018539 9018539 + Silent SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC4 4585 mdanderson.org 37 3 195509180 195509180 + Missense_Mutation SNP C C G rs201718547 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC4 4585 mdanderson.org 37 3 195513222 195513222 + Silent SNP G G A rs2688554 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 MUC6 4588 mdanderson.org 37 11 1018462 1018462 + Missense_Mutation SNP C C T rs79350029 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 NASP 4678 mdanderson.org 37 1 46073299 46073299 + Missense_Mutation SNP C C T rs140271488 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 NASP 4678 mdanderson.org 37 1 46073323 46073323 + Missense_Mutation SNP G G A rs201683842 TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 NBPF10 100132406 mdanderson.org 37 1 145296448 145296448 + Missense_Mutation SNP T T A rs78828650 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 PCMTD1 115294 mdanderson.org 37 8 52733227 52733227 + Missense_Mutation SNP C C T novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 PITRM1 10531 mdanderson.org 37 10 3208557 3208557 + Silent SNP A A G rs12359035 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 SPERT 220082 mdanderson.org 37 13 46288145 46288145 + Missense_Mutation SNP A A G rs7317245 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 ZNF28 7576 mdanderson.org 37 19 53303332 53303332 + Missense_Mutation SNP C C T rs142442328 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 PRG4 10216 bcgsc.ca 37 1 186276175 186276175 + Missense_Mutation SNP A A G rs140988757 byfrequency TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 BACE1 23621 bcgsc.ca 37 11 117163879 117163881 + In_Frame_Del DEL CAG CAG - novel TCGA-KN-8418-01A-11D-2310-10 TCGA-KN-8418-11A-01D-2310-10 CAG CAG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96 9a90f951-ad96-4883-b97f-ac43395dae5d 3fd6a085-bd95-4632-af35-79f1ba65fe96