Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID ECHS1 1892 hgsc.bcm.edu 37 10 135186806 135186806 + Missense_Mutation SNP A A G rs1130833 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FMN2 56776 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 240371393 240371393 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 WNT3 7473 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 44847153 44847153 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 GDF5 8200 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 20 34021967 34021967 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 DUSP11 8446 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 2 74007178 74007178 + Missense_Mutation SNP G G A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 KCMF1 56888 broad.mit.edu;hgsc.bcm.edu 37 2 85262268 85262268 + Frame_Shift_Del DEL C C - novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 EYA4 2070 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 133789819 133789819 + Missense_Mutation SNP C C A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 COL16A1 1307 broad.mit.edu;hgsc.bcm.edu 37 1 32149324 32149324 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 LAMA3 3909 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 18 21404467 21404467 + Missense_Mutation SNP G G T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 PCDHA5 56143 hgsc.bcm.edu 37 5 140201458 140201458 + Missense_Mutation SNP C C T rs144627570 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 NBPF10 100132406 broad.mit.edu 37 1 145299779 145299779 + Silent SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 HSPA14 51182 broad.mit.edu 37 10 14890641 14890641 + Silent SNP G G A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 TUB 7275 broad.mit.edu;mdanderson.org;bcgsc.ca 37 11 8120345 8120345 + Missense_Mutation SNP G G A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 HNRNPKP3 399881 broad.mit.edu 37 11 43283606 43283606 + RNA DEL A A - novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 OR5M10 390167 broad.mit.edu 37 11 56344713 56344713 + Missense_Mutation SNP A A T rs140389540 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MS4A14 84689 broad.mit.edu 37 11 60165391 60165391 + Missense_Mutation SNP G G A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 GOLGA3 2802 broad.mit.edu 37 12 133357472 133357472 + Missense_Mutation SNP T T C novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 TPP2 7174 broad.mit.edu 37 13 103328696 103328696 + Silent SNP A A G novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 ZNF629 23361 broad.mit.edu;mdanderson.org;bcgsc.ca 37 16 30794552 30794552 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 CHST6 4166 broad.mit.edu 37 16 75512651 75512651 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 TSHZ1 10194 broad.mit.edu 37 18 72997839 72997839 + Silent SNP A A C novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 EPT1 85465 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 26608003 26608003 + Missense_Mutation SNP G G A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MUC4 4585 broad.mit.edu 37 3 195513758 195513758 + Missense_Mutation SNP G G C rs202045385 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 LRBA 987 broad.mit.edu 37 4 151842427 151842427 + Silent SNP A A G novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 ATAT1 79969 broad.mit.edu 37 6 30610646 30610646 + Frame_Shift_Del DEL T T - novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 CALU 813 broad.mit.edu 37 7 128407599 128407599 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 CNTLN 54875 broad.mit.edu 37 9 17409364 17409364 + Missense_Mutation SNP A A G novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 WIPF3 644150 broad.mit.edu 37 7 29924113 29924114 + Frame_Shift_Ins INS - - C novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 IRF5 3663 ucsc.edu 37 7 128586594 128586594 + Missense_Mutation SNP A A G novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 TNRC18 84629 ucsc.edu 37 7 5401630 5401630 + Missense_Mutation SNP T T C novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 UPF1 5976 ucsc.edu 37 19 18976950 18976950 + Missense_Mutation SNP T T G novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 CYP2W1 54905 mdanderson.org 37 7 1023013 1023013 + Silent SNP C C T rs2272375 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 DND1 373863 mdanderson.org 37 5 140052407 140052407 + Missense_Mutation SNP G G A rs75523379 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FAM26F 441168 mdanderson.org 37 6 116783330 116783330 + Missense_Mutation SNP G G A rs3087828 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FAM8A1 51439 mdanderson.org 37 6 17602863 17602863 + Missense_Mutation SNP C C T rs80120441 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FAM8A1 51439 mdanderson.org 37 6 17602895 17602895 + Missense_Mutation SNP A A G rs79412549 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FAM8A1 51439 mdanderson.org 37 6 17602910 17602910 + Missense_Mutation SNP G G A rs144013791 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FAM8A1 51439 mdanderson.org 37 6 17606205 17606205 + Missense_Mutation SNP G G A rs79642714 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FLG 2312 mdanderson.org 37 1 152284576 152284576 + Missense_Mutation SNP C C A rs71585892 alternate_allele TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 FMN2 56776 mdanderson.org 37 1 240370995 240370995 + Silent SNP G G A rs201866430 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 GH2 2689 mdanderson.org 37 17 61959155 61959155 + Missense_Mutation SNP C C T rs41295025 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 GUCY2D 3000 mdanderson.org 37 17 7906519 7906519 + Missense_Mutation SNP G G T rs61749665 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 KISS1 3814 mdanderson.org 37 1 204159787 204159787 + Missense_Mutation SNP G G C rs4889 bycluster;byfrequency;by1000genomes TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MUC21 394263 mdanderson.org 37 6 30955201 30955201 + Missense_Mutation SNP G G A rs2508018 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MUC4 4585 mdanderson.org 37 3 195511403 195511403 + Missense_Mutation SNP C C T rs78846267 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MUC4 4585 mdanderson.org 37 3 195511412 195511412 + Missense_Mutation SNP T T A rs199878638 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MUC4 4585 mdanderson.org 37 3 195515126 195515126 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 NCOR1 9611 mdanderson.org 37 17 16097825 16097825 + Missense_Mutation SNP T T G rs73281920 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 NCOR1 9611 mdanderson.org 37 17 16097870 16097870 + Missense_Mutation SNP C C A rs76145228 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 PKDREJ 10343 mdanderson.org;bcgsc.ca 37 22 46656278 46656278 + Missense_Mutation SNP G G A rs117787407 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 PLCB3 5331 mdanderson.org 37 11 64026685 64026685 + Silent SNP C C T rs28395882 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 POTEE 445582 mdanderson.org 37 2 132021475 132021475 + Missense_Mutation SNP G G A rs11546936 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 RSBN1 54665 mdanderson.org 37 1 114354654 114354654 + Silent SNP T T C rs3195954 byfrequency TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 SOX12 6666 mdanderson.org 37 20 307249 307249 + Silent SNP G G A novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 DNAH14 127602 bcgsc.ca 37 1 225428443 225428443 + Missense_Mutation SNP C C T novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 KCMF1 56888 bcgsc.ca 37 2 85262269 85262269 + Frame_Shift_Del DEL C C - novel TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 MST1 4485 bcgsc.ca 37 3 49721606 49721606 + Missense_Mutation SNP G G A rs138238101 TCGA-KM-8439-01A-11D-2310-10 TCGA-KM-8439-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5 9d3b0b87-5fc5-4d09-9c63-4d5fc4bc46d0 1f433ac7-b321-46a9-87ac-c72ad5b1b4e5