Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID APOA1 335 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 11 116707862 116707862 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ACAP3 116983 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 1235261 1235261 + Missense_Mutation SNP C C G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TMEM132C 92293 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 129180458 129180458 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SRGAP1 57522 hgsc.bcm.edu;ucsc.edu 37 12 64436722 64436722 + Silent SNP T T A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CEP290 80184 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 88444148 88444148 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZFP106 64397 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 42742931 42742931 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e DTWD1 56986 hgsc.bcm.edu 37 15 49926993 49926994 + Splice_Site INS - - A rs111446752 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e VPS13C 54832 hgsc.bcm.edu 37 15 62261606 62261606 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GDPGP1 390637 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 15 90784689 90784689 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CCDC154 645811 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 16 1493884 1493884 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TSC2 7249 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 16 2113034 2113034 + Missense_Mutation SNP A A T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TAS1R1 80835 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 6634949 6634949 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PKD1L2 114780 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 16 81242140 81242140 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KCNH4 23415 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 40321548 40321548 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PDK2 5164 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 48184157 48184157 + Splice_Site SNP G G C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TP53 7157 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 17 7577064 7577064 + Nonsense_Mutation SNP T T A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PALM3 342979 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 14164838 14164838 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SLC9A8 23315 hgsc.bcm.edu;bcgsc.ca 37 20 48467342 48467342 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SYN3 8224 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 22 33327400 33327400 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e HEG1 57493 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 124692706 124692706 + Missense_Mutation SNP C C G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ERC2 26059 broad.mit.edu;hgsc.bcm.edu 37 3 55984500 55984502 + In_Frame_Del DEL CTT CTT - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 CTT CTT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GAK 2580 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 4 843563 843563 + Splice_Site SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PCDH1 5097 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 5 141236865 141236865 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZFP62 643836 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 5 180276712 180276712 + Nonsense_Mutation SNP C C A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e NR2F1 7025 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 5 92923831 92923831 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR5V1 81696 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 29323612 29323612 + Missense_Mutation SNP C C A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e VWA7 80737 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 31734079 31734079 + Missense_Mutation SNP T T A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TAS2R38 5726 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 7 141672852 141672852 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SLC29A4 222962 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 5334542 5334542 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TNRC18 84629 hgsc.bcm.edu 37 7 5428642 5428642 + Silent SNP G G A rs144662045 by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZC3H3 23144 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 144550602 144550602 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TAF9B 51616 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 77395087 77395087 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e C16orf11 146325 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 16 613379 613379 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e LDLR 3949 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 11210912 11210912 + Nonsense_Mutation SNP C C A rs2228671 bycluster;byfrequency;by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e NDST4 64579 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 4 115998171 115998171 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ENAM 10117 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 4 71509879 71509879 + Silent SNP C C T rs143333113 by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC17 140453 hgsc.bcm.edu;mdanderson.org 37 7 100681510 100681510 + Silent SNP T T C rs116767656 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e IKBKG 8517 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 X 153770612 153770612 + Missense_Mutation SNP G G C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PER3 8863 broad.mit.edu 37 1 7887663 7887663 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e RERE 473 broad.mit.edu 37 1 8424203 8424203 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GALNT2 2590 broad.mit.edu;mdanderson.org 37 1 230372423 230372423 + Silent SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KCNMA1 3778 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 78649263 78649263 + Missense_Mutation SNP C C A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PARVA 55742 broad.mit.edu 37 11 12399324 12399324 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e RASSF10 644943 broad.mit.edu 37 11 13031416 13031416 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR5AK2 390181 broad.mit.edu;ucsc.edu 37 11 56756940 56756940 + Silent SNP T T A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e DLG2 1740 broad.mit.edu 37 11 84996301 84996301 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KDM5A 5927 broad.mit.edu;mdanderson.org 37 12 416696 416696 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SLC35E3 55508 broad.mit.edu;mdanderson.org 37 12 69140526 69140526 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ATP12A 479 broad.mit.edu;mdanderson.org;bcgsc.ca 37 13 25255781 25255781 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e FNDC3A 22862 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 49771038 49771038 + Missense_Mutation SNP A A T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR4M1 441670 broad.mit.edu;mdanderson.org 37 14 20248894 20248894 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR4K17 390436 broad.mit.edu 37 14 20586424 20586424 + Frame_Shift_Del DEL T T - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CAPN3 825 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 42684852 42684852 + Missense_Mutation SNP C C A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SLC12A1 6557 broad.mit.edu;mdanderson.org 37 15 48518686 48518686 + Silent SNP C C G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e POLR2M 81488 broad.mit.edu;mdanderson.org 37 15 58004208 58004208 + Missense_Mutation SNP C C G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e POLR2M 81488 broad.mit.edu;mdanderson.org 37 15 58004276 58004276 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e POLR2M 81488 broad.mit.edu;mdanderson.org 37 15 58004287 58004287 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e FAM174B 400451 broad.mit.edu 37 15 93173567 93173567 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ARHGAP17 55114 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 24950855 24950855 + Missense_Mutation SNP G G T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e EIF3C 8663 broad.mit.edu 37 16 28403353 28403355 + In_Frame_Del DEL TCC TCC - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 TCC TCC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SLC7A6 9057 broad.mit.edu;mdanderson.org 37 16 68325151 68325151 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PLGLA 285189 broad.mit.edu 37 2 107002809 107002809 + RNA DEL G G - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e RANBP2 5903 broad.mit.edu 37 2 109383357 109383357 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZDBF2 57683 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 207171302 207171302 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SMARCAL1 50485 broad.mit.edu 37 2 217340073 217340073 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GLB1L 79411 broad.mit.edu;mdanderson.org 37 2 220102299 220102299 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e NCOA6 23054 broad.mit.edu;mdanderson.org 37 20 33345744 33345744 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CABIN1 23523 broad.mit.edu;ucsc.edu;mdanderson.org 37 22 24472140 24472140 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GADL1 339896 broad.mit.edu;mdanderson.org 37 3 30875422 30875422 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PIK3CB 5291 broad.mit.edu 37 3 138433374 138433374 + Missense_Mutation SNP G G T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CPA3 1359 broad.mit.edu;mdanderson.org 37 3 148583133 148583133 + Silent SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e DEPDC1B 55789 broad.mit.edu 37 5 59894911 59894911 + Silent SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GABRP 2568 broad.mit.edu 37 5 170239019 170239019 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KPNA5 3841 broad.mit.edu;mdanderson.org 37 6 117013533 117013533 + Silent SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SYNE1 23345 broad.mit.edu;bcgsc.ca 37 6 152642498 152642498 + Nonsense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e GTF2IRD2P1 401375 broad.mit.edu 37 7 72658559 72658559 + RNA SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZAN 7455 broad.mit.edu 37 7 100349994 100349994 + Missense_Mutation SNP C C A rs221829 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ADAM28 10863 broad.mit.edu;ucsc.edu 37 8 24170913 24170913 + Silent SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PABPC1 26986 broad.mit.edu 37 8 101733723 101733723 + Frame_Shift_Del DEL T T - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e RIMS2 9699 broad.mit.edu 37 8 104513292 104513292 + Splice_Site DEL T T - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e HAS2 3037 broad.mit.edu 37 8 122626903 122626903 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e FAM22G 441457 broad.mit.edu 37 9 99701229 99701231 + In_Frame_Del DEL CTT CTT - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 CTT CTT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR13C2 392376 broad.mit.edu 37 9 107367738 107367738 + Silent SNP G G C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZFY 7544 broad.mit.edu;mdanderson.org;bcgsc.ca 37 Y 2829115 2829115 + Missense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e C1orf35 79169 broad.mit.edu 37 1 228289842 228289843 + Frame_Shift_Ins INS - - C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR2T4 127074 broad.mit.edu 37 1 248524966 248524967 + Frame_Shift_Ins INS - - G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KRT2 3849 broad.mit.edu 37 12 53045623 53045624 + In_Frame_Ins INS - - GCC novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR4K17 390436 broad.mit.edu 37 14 20586433 20586434 + Frame_Shift_Ins INS - - T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e LOC646278 0 broad.mit.edu 37 15 29037099 29037100 + RNA INS - - GG novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SNX1 6642 broad.mit.edu 37 15 64426911 64426912 + Frame_Shift_Ins INS - - A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZNF469 84627 broad.mit.edu 37 16 88505623 88505624 + Frame_Shift_Ins INS - - C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CCDC144B 284047 broad.mit.edu 37 17 18498496 18498497 + RNA INS - - A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MAPK11 5600 broad.mit.edu 37 22 50703803 50703804 + Frame_Shift_Ins INS - - C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MAML3 55534 broad.mit.edu 37 4 140811108 140811109 + In_Frame_Ins INS - - TGT rs66794549 alternate_allele TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e APC 324 broad.mit.edu 37 5 112155000 112155001 + Frame_Shift_Ins INS - - G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e FLJ35390 0 broad.mit.edu 37 7 44081003 44081004 + RNA INS - - C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PABPC1 26986 broad.mit.edu 37 8 101733701 101733702 + Frame_Shift_Ins INS - - A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PABPC1 26986 broad.mit.edu 37 8 101733702 101733703 + Frame_Shift_Ins INS - - G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ABCC6 368 ucsc.edu;mdanderson.org;bcgsc.ca 37 16 16251599 16251599 + Missense_Mutation SNP C C T rs2238472 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CFHR3 10878 ucsc.edu 37 1 196759282 196759282 + Missense_Mutation SNP C C T rs379370 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e DENND6A 201627 ucsc.edu;bcgsc.ca 37 3 57631404 57631404 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e LRP12 29967 ucsc.edu;bcgsc.ca 37 8 105510296 105510296 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e NUAK2 81788 ucsc.edu;bcgsc.ca 37 1 205274455 205274455 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e UCP2 7351 ucsc.edu;mdanderson.org;bcgsc.ca 37 11 73686146 73686146 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105408107 105408107 + Missense_Mutation SNP G G T rs200549975 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105408140 105408140 + Missense_Mutation SNP C C G rs201663085 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415160 105415160 + Missense_Mutation SNP C C G rs201874096 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415166 105415166 + Missense_Mutation SNP C C T rs201667039 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415171 105415171 + Missense_Mutation SNP A A G rs201552064 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415196 105415196 + Missense_Mutation SNP T T C rs200598682 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415200 105415200 + Silent SNP G G C rs10145566 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415737 105415737 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e AHNAK2 113146 mdanderson.org 37 14 105415748 105415748 + Missense_Mutation SNP G G A rs118171013 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ANKRD30BL 554226 mdanderson.org 37 2 132912316 132912316 + RNA SNP G G A rs200558206 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e C5orf60 285679 mdanderson.org 37 5 179071836 179071836 + Silent SNP C C T rs4990391 bycluster;byfrequency;by2hit2allele;by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CCDC85C 317762 mdanderson.org 37 14 100070030 100070030 + Silent SNP G G A rs78667152 bycluster;byfrequency;by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e CLEC18C 283971 mdanderson.org 37 16 70211266 70211266 + Silent SNP G G A rs142678589 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e DARC 2532 mdanderson.org 37 1 159175354 159175354 + Missense_Mutation SNP G G A rs12075 bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e FAM81A 145773 mdanderson.org 37 15 59808946 59808946 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e HERC1 8925 mdanderson.org 37 15 64010819 64010819 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e HLA-G 3135 mdanderson.org 37 6 29797430 29797430 + Silent SNP G G T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KLF10 7071 mdanderson.org 37 8 103663512 103663512 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e KRTAP5-4 387267 mdanderson.org 37 11 1642989 1642989 + Missense_Mutation SNP C C A rs184758001 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e LILRA1 11024 mdanderson.org 37 19 55107397 55107397 + Missense_Mutation SNP G G A rs149029653 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MAGEC1 9947 mdanderson.org 37 X 140994320 140994320 + Missense_Mutation SNP G G T rs7063168 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MBD3L2 125997 mdanderson.org 37 19 7051608 7051608 + Missense_Mutation SNP G G A rs1610758 bycluster;byfrequency;by1000genomes TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC17 140453 mdanderson.org 37 7 100681917 100681917 + Missense_Mutation SNP T T C rs111633703 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC17 140453 mdanderson.org 37 7 100681951 100681951 + Silent SNP C C A rs141774606 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC2 4583 mdanderson.org 37 11 1092459 1092459 + Silent SNP C C A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC2 4583 mdanderson.org 37 11 1092953 1092953 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC4 4585 mdanderson.org 37 3 195507502 195507502 + Missense_Mutation SNP A A G rs113781173 alternate_allele TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MUC6 4588 mdanderson.org 37 11 1018031 1018031 + Silent SNP G G A rs10751678 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MYH7 4625 mdanderson.org 37 14 23885477 23885477 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MYH7 4625 mdanderson.org 37 14 23886718 23886718 + Silent SNP G G A rs182311329 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MYH7 4625 mdanderson.org 37 14 23886724 23886724 + Silent SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MYO5B 4645 mdanderson.org 37 18 47364066 47364067 + Missense_Mutation DNP GC GC AT novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 GC GC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR2AG1 144125 mdanderson.org 37 11 6806963 6806963 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR4K5 79317 mdanderson.org 37 14 20389305 20389305 + Silent SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR5AK2 390181 mdanderson.org 37 11 56756940 56756941 + Missense_Mutation DNP TC TC AT novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 TC TC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR5H6 79295 mdanderson.org 37 3 97983602 97983602 + Silent SNP T T C rs75354046 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PCDHB4 56131 mdanderson.org 37 5 140503002 140503002 + Silent SNP C C A rs61741603 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PDIA2 64714 mdanderson.org 37 16 334732 334732 + Silent SNP C C T rs45593734 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e POM121 9883 mdanderson.org 37 7 72412591 72412591 + Missense_Mutation SNP G G A rs2530522 TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e POTEE 445582 mdanderson.org 37 2 132021815 132021815 + Silent SNP G G A rs7424053 bycluster TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e PRSS1 5644 mdanderson.org 37 7 142460752 142460752 + Missense_Mutation SNP C C G rs140793689 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e RNF145 153830 mdanderson.org 37 5 158595995 158595995 + Missense_Mutation SNP A A G novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e SLC25A51 92014 mdanderson.org 37 9 37888331 37888331 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TAS2R4 50832 mdanderson.org 37 7 141478800 141478800 + Missense_Mutation SNP G G A rs2234002 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e UBR5 51366 mdanderson.org;bcgsc.ca 37 8 103277497 103277497 + Nonsense_Mutation SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZCWPW2 152098 mdanderson.org;bcgsc.ca 37 3 28533617 28533617 + Splice_Site SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZCWPW2 152098 mdanderson.org 37 3 28533652 28533652 + Silent SNP G G A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ZYG11A 440590 mdanderson.org 37 1 53320274 53320274 + Missense_Mutation SNP G G T rs480299 byfrequency TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e TCHH 7062 bcgsc.ca 37 1 152082364 152082364 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR2T4 127074 bcgsc.ca 37 1 248524967 248524967 + Missense_Mutation SNP A A C rs200915140 alternate_allele TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR5AK2 390181 bcgsc.ca 37 11 56756941 56756941 + Missense_Mutation SNP C C T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR4K17 390436 bcgsc.ca 37 14 20586425 20586425 + Frame_Shift_Del DEL T T - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ERC2 26059 bcgsc.ca 37 3 55984501 55984503 + In_Frame_Del DEL CTT CTT - novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 CTT CTT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e MCM9 254394 bcgsc.ca 37 6 119136171 119136171 + Missense_Mutation SNP T T C novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e ND6 0 bcgsc.ca 37 MT 14159 14159 + Missense_Mutation SNP C C A novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e OR4K17 390436 bcgsc.ca 37 14 20586434 20586435 + Frame_Shift_Ins INS - - T novel TCGA-KL-8341-01A-11D-2310-10 TCGA-KL-8341-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e e9032df3-8692-4146-a867-b9b64c9b310a 9f1b349f-503a-4237-8da4-9100de610e1e