Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID EIF2AK1 27102 hgsc.bcm.edu 36 7 6049097 6049097 + Nonsense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TBX20 57057 hgsc.bcm.edu 36 7 35237644 35237644 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AMPH 273 hgsc.bcm.edu 36 7 38483049 38483049 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 GLI3 2737 hgsc.bcm.edu 36 7 41970586 41970586 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PSPH 5723 hgsc.bcm.edu 36 7 56046950 56046950 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF479 90827 hgsc.bcm.edu 36 7 57192040 57192040 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF479 90827 hgsc.bcm.edu 36 7 57198258 57198258 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PCLO 27445 hgsc.bcm.edu 36 7 82383814 82383814 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SAMD9L 219285 hgsc.bcm.edu 36 7 92603060 92603060 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PEG10 23089 hgsc.bcm.edu 36 7 94131928 94131928 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NPTX2 4885 hgsc.bcm.edu 36 7 98095722 98095722 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PTPRZ1 5803 hgsc.bcm.edu 36 7 121438337 121438337 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 BRAF 673 hgsc.bcm.edu 36 7 140095641 140095641 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 JPH2 57158 hgsc.bcm.edu 36 20 42248592 42248592 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZMYND8 23613 hgsc.bcm.edu 36 20 45286484 45286484 + Missense_Mutation SNP T T A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SLC17A9 63910 hgsc.bcm.edu 36 20 61064434 61064434 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KCNJ4 3761 hgsc.bcm.edu 36 22 37153800 37153800 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PKDREJ 10343 hgsc.bcm.edu 36 22 45036797 45036797 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MOV10L1 54456 hgsc.bcm.edu 36 22 48906101 48906101 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 OR4K13 390433 hgsc.bcm.edu 36 14 19572462 19572462 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CHD8 57680 hgsc.bcm.edu 36 14 20946536 20946536 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARHGAP5 394 hgsc.bcm.edu 36 14 31630298 31630298 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C14orf73 91828 hgsc.bcm.edu 36 14 102643610 102643610 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TDRD9 122402 hgsc.bcm.edu 36 14 103558361 103558361 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PACS2 23241 hgsc.bcm.edu 36 14 104929068 104929068 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF77 58492 hgsc.bcm.edu 36 19 2887656 2887656 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PLIN4 0 hgsc.bcm.edu 36 19 4463840 4463840 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 INSR 3643 hgsc.bcm.edu 36 19 7068185 7068185 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 UNC13A 23025 hgsc.bcm.edu 36 19 17604702 17604702 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF486 90649 hgsc.bcm.edu 36 19 20168881 20168881 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF429 353088 hgsc.bcm.edu 36 19 21512297 21512297 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 IGFL1 374918 hgsc.bcm.edu 36 19 51425463 51425463 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF578 147660 hgsc.bcm.edu 36 19 57706242 57706242 + Missense_Mutation SNP A A C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NUDT18 79873 hgsc.bcm.edu 36 8 22020800 22020800 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ERLIN2 11160 hgsc.bcm.edu 36 8 37714644 37714644 + Missense_Mutation SNP T T G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ADAM2 2515 hgsc.bcm.edu 36 8 39732458 39732458 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PXDNL 137902 hgsc.bcm.edu 36 8 52483778 52483778 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NCOA2 10499 hgsc.bcm.edu 36 8 71241520 71241520 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TRPA1 8989 hgsc.bcm.edu 36 8 73111130 73111130 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 EIF3E 3646 hgsc.bcm.edu 36 8 109309780 109309780 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 COL14A1 7373 hgsc.bcm.edu 36 8 121382153 121382153 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 COL14A1 7373 hgsc.bcm.edu 36 8 121382154 121382154 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PHF20L1 51105 hgsc.bcm.edu 36 8 133898789 133898789 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MORN1 79906 hgsc.bcm.edu 36 1 2242839 2242839 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SPEN 64783 hgsc.bcm.edu 36 1 16129029 16129029 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PAFAH2 5051 hgsc.bcm.edu 36 1 26188580 26188580 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CSMD2 114784 hgsc.bcm.edu 36 1 33855769 33855769 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 WDR65 149465 hgsc.bcm.edu 36 1 43492333 43492333 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PTPRF 5792 hgsc.bcm.edu 36 1 43842223 43842223 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FGGY 55277 hgsc.bcm.edu 36 1 59584519 59584519 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TGFBR3 7049 hgsc.bcm.edu 36 1 91946893 91946893 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ABCA4 24 hgsc.bcm.edu 36 1 94268627 94268627 + Missense_Mutation SNP C C T rs56357060 unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 S1PR1 1901 hgsc.bcm.edu 36 1 101478123 101478123 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C1orf59 113802 hgsc.bcm.edu 36 1 109001645 109001645 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AP4B1 10717 hgsc.bcm.edu 36 1 114245901 114245901 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FAM72B 653820 hgsc.bcm.edu 36 1 120656051 120656051 + Missense_Mutation SNP T T C rs56354646 unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SV2A 9900 hgsc.bcm.edu 36 1 148146289 148146289 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FLG 2312 hgsc.bcm.edu 36 1 150543841 150543841 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CHRNB2 1141 hgsc.bcm.edu 36 1 152810898 152810898 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ATP1A4 480 hgsc.bcm.edu 36 1 158407796 158407796 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ADAMTS4 9507 hgsc.bcm.edu 36 1 159430440 159430440 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CACNA1E 777 hgsc.bcm.edu 36 1 179993842 179993842 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CFHR5 81494 hgsc.bcm.edu 36 1 195240430 195240430 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KDM5B 10765 hgsc.bcm.edu 36 1 200965651 200965651 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KDM5B 10765 hgsc.bcm.edu 36 1 200965709 200965709 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KCNH1 3756 hgsc.bcm.edu 36 1 208923824 208923824 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RAB3GAP2 25782 hgsc.bcm.edu 36 1 218411070 218411070 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HHIPL2 79802 hgsc.bcm.edu 36 1 220783819 220783819 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ACTA1 58 hgsc.bcm.edu 36 1 227635404 227635404 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RYR2 6262 hgsc.bcm.edu 36 1 235910481 235910481 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 DNHD1 144132 hgsc.bcm.edu 36 11 6548538 6548538 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 OR4C11 219429 hgsc.bcm.edu 36 11 55128033 55128033 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 OR4S2 219431 hgsc.bcm.edu 36 11 55175362 55175362 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HNRNPUL2 221092 hgsc.bcm.edu 36 11 62241058 62241058 + Nonsense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZFPL1 7542 hgsc.bcm.edu 36 11 64608827 64608827 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CATSPER1 117144 hgsc.bcm.edu 36 11 65544915 65544915 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C11orf30 56946 hgsc.bcm.edu 36 11 75852606 75852606 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RSF1 51773 hgsc.bcm.edu 36 11 77060862 77060862 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PICALM 8301 hgsc.bcm.edu 36 11 85369829 85369829 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MRE11A 4361 hgsc.bcm.edu 36 11 93844524 93844524 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CCDC82 79780 hgsc.bcm.edu 36 11 95757510 95757510 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CNTN5 53942 hgsc.bcm.edu 36 11 99332793 99332793 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 DYNC2H1 79659 hgsc.bcm.edu 36 11 102679122 102679122 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ATM 472 hgsc.bcm.edu 36 11 107741328 107741328 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FAM55D 54827 hgsc.bcm.edu 36 11 113956227 113956227 + Silent SNP T T A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 VSIG2 23584 hgsc.bcm.edu 36 11 124123820 124123820 + Silent SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FOXRED1 55572 hgsc.bcm.edu 36 11 125651315 125651315 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 F13A1 2162 hgsc.bcm.edu 36 6 6142480 6142480 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LHFPL5 222662 hgsc.bcm.edu 36 6 35890452 35890452 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MDGA1 266727 hgsc.bcm.edu 36 6 37725935 37725935 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C6orf138 442213 hgsc.bcm.edu 36 6 48144233 48144233 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TINAG 27283 hgsc.bcm.edu 36 6 54320271 54320271 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RIMS1 22999 hgsc.bcm.edu 36 6 73025449 73025449 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PTPRK 5796 hgsc.bcm.edu 36 6 128339554 128339554 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TP53 7157 hgsc.bcm.edu 36 17 7518902 7518902 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 GAS7 8522 hgsc.bcm.edu 36 17 9790963 9790963 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ALDH3A2 224 hgsc.bcm.edu 36 17 19515741 19515741 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TAOK1 57551 hgsc.bcm.edu 36 17 24873431 24873431 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CACNB1 782 hgsc.bcm.edu 36 17 34585418 34585418 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRT13 3860 hgsc.bcm.edu 36 17 36911514 36911514 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 EFTUD2 9343 hgsc.bcm.edu 36 17 40292851 40292851 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LGALS3BP 3959 hgsc.bcm.edu 36 17 74480226 74480226 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRTAP13-3 337960 hgsc.bcm.edu 36 21 30719843 30719843 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ITSN1 6453 hgsc.bcm.edu 36 21 34179281 34179281 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CLIC6 54102 hgsc.bcm.edu 36 21 34964684 34964684 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MMP25 79148 hgsc.bcm.edu 36 16 3040090 3040090 + Silent SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SRL 6345 hgsc.bcm.edu 36 16 4194550 4194550 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RABEP2 79874 hgsc.bcm.edu 36 16 28824980 28824980 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SRCAP 10847 hgsc.bcm.edu 36 16 30657677 30657677 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF646 9726 hgsc.bcm.edu 36 16 30996821 30996821 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 IRX6 79190 hgsc.bcm.edu 36 16 53920307 53920307 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CNGB1 1258 hgsc.bcm.edu 36 16 56554385 56554385 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CTRL 1506 hgsc.bcm.edu 36 16 66521660 66521660 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SMPD3 55512 hgsc.bcm.edu 36 16 66963364 66963364 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HYDIN 54768 hgsc.bcm.edu 36 16 69512505 69512505 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZFHX3 463 hgsc.bcm.edu 36 16 71549367 71549367 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CNTNAP4 85445 hgsc.bcm.edu 36 16 75129729 75129729 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MAPK4 5596 hgsc.bcm.edu 36 18 46444731 46444731 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 COLQ 8292 hgsc.bcm.edu 36 3 15504725 15504725 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TOP2B 7155 hgsc.bcm.edu 36 3 25640153 25640153 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CTNNB1 1499 hgsc.bcm.edu 36 3 41243771 41243771 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF197 10168 hgsc.bcm.edu 36 3 44645732 44645732 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PRSS42 0 hgsc.bcm.edu 36 3 46850161 46850161 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MST1R 4486 hgsc.bcm.edu 36 3 49899775 49899775 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PBRM1 55193 hgsc.bcm.edu 36 3 52585597 52585597 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CACNA1D 776 hgsc.bcm.edu 36 3 53779530 53779530 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CACNA2D3 55799 hgsc.bcm.edu 36 3 54651230 54651230 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ROBO2 6092 hgsc.bcm.edu 36 3 77609305 77609305 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TMEM45A 55076 hgsc.bcm.edu 36 3 101758332 101758332 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 GPR128 84873 hgsc.bcm.edu 36 3 101856537 101856537 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 OSBPL11 114885 hgsc.bcm.edu 36 3 126754156 126754156 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 STAG1 56937 hgsc.bcm.edu 36 3 137624007 137624007 + Nonsense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ATR 390502 hgsc.bcm.edu 36 3 143686701 143686701 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AGTR1 185 hgsc.bcm.edu 36 3 149942007 149942007 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AGTR1 185 hgsc.bcm.edu 36 3 149942025 149942025 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PHC3 80012 hgsc.bcm.edu 36 3 171329303 171329303 + Nonsense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PIK3CA 5290 hgsc.bcm.edu 36 3 180418785 180418785 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PIK3CA 5290 hgsc.bcm.edu 36 3 180434691 180434691 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PIK3CA 5290 hgsc.bcm.edu 36 3 180434712 180434712 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ATP11B 23200 hgsc.bcm.edu 36 3 184066900 184066900 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TP63 8626 hgsc.bcm.edu 36 3 191008829 191008829 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 COPS7A 50813 hgsc.bcm.edu 36 12 6710134 6710134 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRAS 3845 hgsc.bcm.edu 36 12 25289548 25289548 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ITPR2 3709 hgsc.bcm.edu 36 12 26700643 26700643 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 DIP2B 57609 hgsc.bcm.edu 36 12 49360789 49360789 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRT1 3848 hgsc.bcm.edu 36 12 51358656 51358656 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRT8 3856 hgsc.bcm.edu 36 12 51584748 51584748 + Silent SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 OR9K2 441639 hgsc.bcm.edu 36 12 53810024 53810024 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LRP1 10438 hgsc.bcm.edu 36 12 55861235 55861235 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARHGEF25 0 hgsc.bcm.edu 36 12 56294612 56294612 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AVIL 10677 hgsc.bcm.edu 36 12 56491158 56491158 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C12orf64 283310 hgsc.bcm.edu 36 12 79171427 79171427 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 STAB2 55576 hgsc.bcm.edu 36 12 102508878 102508878 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RNF10 9921 hgsc.bcm.edu 36 12 119479603 119479603 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF605 90462 hgsc.bcm.edu 36 12 132019804 132019804 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ATP10A 57194 hgsc.bcm.edu 36 15 23491224 23491224 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TMCO5A 145942 hgsc.bcm.edu 36 15 36015834 36015834 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 UNC13C 440279 hgsc.bcm.edu 36 15 52580398 52580398 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CSPG4 1464 hgsc.bcm.edu 36 15 73767530 73767530 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ADAMTS7 11173 hgsc.bcm.edu 36 15 76879849 76879849 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF710 374655 hgsc.bcm.edu 36 15 88411967 88411967 + Silent SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 BLM 641 hgsc.bcm.edu 36 15 89138420 89138420 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ASB7 140460 hgsc.bcm.edu 36 15 98987738 98987738 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARSF 416 hgsc.bcm.edu 36 X 3000191 3000191 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 VCX 26609 hgsc.bcm.edu 36 X 7771705 7771705 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MSL3 10943 hgsc.bcm.edu 36 X 11693656 11693656 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 USP27X 389856 hgsc.bcm.edu 36 X 49531871 49531871 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 OPHN1 4983 hgsc.bcm.edu 36 X 67200535 67200535 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TAF1 6872 hgsc.bcm.edu 36 X 70519671 70519671 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MAGEE2 139599 hgsc.bcm.edu 36 X 74920811 74920811 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ATRX 546 hgsc.bcm.edu 36 X 76775527 76775527 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SRPX2 27286 hgsc.bcm.edu 36 X 99812505 99812505 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MORC4 79710 hgsc.bcm.edu 36 X 106110870 106110870 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 COL4A6 1288 hgsc.bcm.edu 36 X 107292796 107292796 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SAGE1 55511 hgsc.bcm.edu 36 X 134816844 134816844 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 F9 2158 hgsc.bcm.edu 36 X 138471479 138471479 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MAGEC1 9947 hgsc.bcm.edu 36 X 140823741 140823741 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 L1CAM 3897 hgsc.bcm.edu 36 X 152786509 152786509 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TMEM129 92305 hgsc.bcm.edu 36 4 1692252 1692252 + Silent SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 EPHA5 2044 hgsc.bcm.edu 36 4 66150030 66150030 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TMPRSS11A 339967 hgsc.bcm.edu 36 4 68471173 68471173 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ALB 213 hgsc.bcm.edu 36 4 74493975 74493975 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ALB 213 hgsc.bcm.edu 36 4 74494979 74494979 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 G3BP2 9908 hgsc.bcm.edu 36 4 76789750 76789750 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PRKG2 5593 hgsc.bcm.edu 36 4 82280776 82280776 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HPSE 10855 hgsc.bcm.edu 36 4 84474844 84474844 + Missense_Mutation SNP A A T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PTPN13 5783 hgsc.bcm.edu 36 4 87899221 87899221 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SPARCL1 8404 hgsc.bcm.edu 36 4 88634092 88634092 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FAT4 79633 hgsc.bcm.edu 36 4 126632043 126632043 + Missense_Mutation SNP A A C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SCLT1 132320 hgsc.bcm.edu 36 4 130179664 130179664 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PCDH10 57575 hgsc.bcm.edu 36 4 134291694 134291694 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PABPC4L 132430 hgsc.bcm.edu 36 4 135341330 135341330 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FBXW7 55294 hgsc.bcm.edu 36 4 153468915 153468915 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RAPGEF2 9693 hgsc.bcm.edu 36 4 160464155 160464155 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ODZ3 55714 hgsc.bcm.edu 36 4 183910024 183910024 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RWDD4 0 hgsc.bcm.edu 36 4 184809196 184809196 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CCDC111 201973 hgsc.bcm.edu 36 4 185840457 185840457 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PUM2 23369 hgsc.bcm.edu 36 2 20371777 20371777 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PRKD3 23683 hgsc.bcm.edu 36 2 37370087 37370087 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HAAO 23498 hgsc.bcm.edu 36 2 42848291 42848291 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NRXN1 9378 hgsc.bcm.edu 36 2 50609268 50609268 + Silent SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SPTBN1 6711 hgsc.bcm.edu 36 2 54709781 54709781 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CCDC88A 55704 hgsc.bcm.edu 36 2 55377144 55377144 + Missense_Mutation SNP T T G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CTNNA2 1496 hgsc.bcm.edu 36 2 79938726 79938726 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ST6GAL2 84620 hgsc.bcm.edu 36 2 106789609 106789609 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LCT 3938 hgsc.bcm.edu 36 2 136282784 136282784 + Silent SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LRP2 4036 hgsc.bcm.edu 36 2 169742757 169742757 + Nonsense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HAT1 8520 hgsc.bcm.edu 36 2 172549469 172549469 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TTN 7273 hgsc.bcm.edu 36 2 179185371 179185371 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TTN 7273 hgsc.bcm.edu 36 2 179251403 179251403 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TTN 7273 hgsc.bcm.edu 36 2 179343452 179343452 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FRZB 2487 hgsc.bcm.edu 36 2 183411404 183411404 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 COL3A1 1281 hgsc.bcm.edu 36 2 189581978 189581978 + Silent SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 GTF3C3 9330 hgsc.bcm.edu 36 2 197348114 197348114 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SPEG 10290 hgsc.bcm.edu 36 2 220056254 220056254 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TRIP12 9320 hgsc.bcm.edu 36 2 230432113 230432113 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 DIS3L2 129563 hgsc.bcm.edu 36 2 232908808 232908808 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 JAK2 3717 hgsc.bcm.edu 36 9 5067508 5067508 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CTSL1 1514 hgsc.bcm.edu 36 9 89533498 89533498 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PTCH1 5727 hgsc.bcm.edu 36 9 97260237 97260237 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CYLC2 1539 hgsc.bcm.edu 36 9 104807241 104807241 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LCN9 392399 hgsc.bcm.edu 36 9 137695912 137695912 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LATS2 26524 hgsc.bcm.edu 36 13 20460246 20460246 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 BRCA2 675 hgsc.bcm.edu 36 13 31810552 31810552 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 POSTN 10631 hgsc.bcm.edu 36 13 37070861 37070861 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 LCP1 9878 hgsc.bcm.edu 36 13 45630679 45630679 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RB1 5925 hgsc.bcm.edu 36 13 47935914 47935914 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PCDH17 27253 hgsc.bcm.edu 36 13 57106229 57106229 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SLITRK5 26050 hgsc.bcm.edu 36 13 87127540 87127540 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 GPC6 10082 hgsc.bcm.edu 36 13 93280578 93280578 + Missense_Mutation SNP T T A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ERCC5 2073 hgsc.bcm.edu 36 13 102302612 102302612 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARHGEF7 8874 hgsc.bcm.edu 36 13 110730976 110730976 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PTEN 5728 hgsc.bcm.edu 36 10 89614264 89614264 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PLCE1 51196 hgsc.bcm.edu 36 10 95781563 95781563 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KCNK18 338567 hgsc.bcm.edu 36 10 118959343 118959343 + Missense_Mutation SNP C C T rs363360 byCluster;byFrequency;byHapMap TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 DOCK1 1793 hgsc.bcm.edu 36 10 129062458 129062458 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SEMA5A 9037 hgsc.bcm.edu 36 5 9105034 9105034 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF622 90441 hgsc.bcm.edu 36 5 16506197 16506197 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CDH18 1016 hgsc.bcm.edu 36 5 19509295 19509295 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ADAMTS12 81792 hgsc.bcm.edu 36 5 33685426 33685426 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SKIV2L2 23517 hgsc.bcm.edu 36 5 54729005 54729005 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HTR1A 3350 hgsc.bcm.edu 36 5 63292726 63292726 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MAST4 375449 hgsc.bcm.edu 36 5 66494831 66494831 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PIK3R1 5295 hgsc.bcm.edu 36 5 67625384 67625384 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARSB 411 hgsc.bcm.edu 36 5 78217198 78217198 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 APC 324 hgsc.bcm.edu 36 5 112201995 112201995 + Nonsense_Mutation SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 APC 324 hgsc.bcm.edu 36 5 112202711 112202711 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 APC 324 hgsc.bcm.edu 36 5 112203117 112203117 + Silent SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 APC 324 hgsc.bcm.edu 36 5 112203151 112203151 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ZNF608 57507 hgsc.bcm.edu 36 5 124012207 124012207 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KIF3A 11127 hgsc.bcm.edu 36 5 132080537 132080537 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NEUROG1 4762 hgsc.bcm.edu 36 5 134898872 134898872 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PCDHA12 56137 hgsc.bcm.edu 36 5 140236685 140236685 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PCDHGA5 56110 hgsc.bcm.edu 36 5 140724758 140724758 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PCDHGA12 26025 hgsc.bcm.edu 36 5 140791260 140791260 + Silent SNP C C T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PDE6A 5145 hgsc.bcm.edu 36 5 149225935 149225935 + Silent SNP G G A rs59736394 unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NSD1 64324 hgsc.bcm.edu 36 5 176651732 176651732 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ADAMTS2 9509 hgsc.bcm.edu 36 5 178703434 178703434 + Silent SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 NF1 4763 hgsc.bcm.edu 36 17 26532853 26532853 + Splice_Site SNP G G T novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SOX9 6662 hgsc.bcm.edu 36 17 67631278 67631278 + Splice_Site SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 GABPA 2551 hgsc.bcm.edu 36 21 26056548 26056548 + Splice_Site SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MLEC 9761 hgsc.bcm.edu 36 12 119618501 119618501 + Splice_Site SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HNF1A 6927 hgsc.bcm.edu 36 12 119911017 119911017 + Splice_Site SNP A A G novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARSF 416 hgsc.bcm.edu 36 X 3000218 3000218 + Splice_Site SNP T T A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TTN 7273 hgsc.bcm.edu 36 2 179301081 179301081 + Splice_Site SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 TRIP12 9320 hgsc.bcm.edu 36 2 230384165 230384165 + Splice_Site SNP C C A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 RNPEPL1 57140 hgsc.bcm.edu 36 2 241163119 241163119 + Splice_Site SNP G G A novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARID1A 8289 hgsc.bcm.edu 36 1 26928924 26928925 + Frame_Shift_Del DEL CT CT - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 CT CT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FAM171B 165215 hgsc.bcm.edu 36 2 187267274 187267275 + In_Frame_Ins INS - - CAG novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AQP12A 375318 hgsc.bcm.edu 36 2 241280459 241280459 + Frame_Shift_Del DEL G G - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MUC4 4585 hgsc.bcm.edu 36 3 196996945 196996992 + In_Frame_Del DEL GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MUC4 4585 hgsc.bcm.edu 36 3 196998195 196998242 + In_Frame_Del DEL TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MUC4 4585 hgsc.bcm.edu 36 3 196999393 196999440 + In_Frame_Del DEL GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PPM1K 152926 hgsc.bcm.edu 36 4 89408467 89408468 + Frame_Shift_Ins INS - - C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FBXW7 55294 hgsc.bcm.edu 36 4 153470298 153470298 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 APC 324 hgsc.bcm.edu 36 5 112203527 112203527 + Frame_Shift_Del DEL C C - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SLC12A2 6558 hgsc.bcm.edu 36 5 127550089 127550090 + Frame_Shift_Ins INS - - TC novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KIAA1009 22832 hgsc.bcm.edu 36 6 84953033 84953035 + In_Frame_Del DEL TTC TTC - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 TTC TTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CUBN 8029 hgsc.bcm.edu 36 10 16970443 16970447 + Frame_Shift_Del DEL AAGTC AAGTC - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 AAGTC AAGTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HSPA8 3312 hgsc.bcm.edu 36 11 122434220 122434221 + Frame_Shift_Del DEL TC TC - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 TC TC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRT1 3848 hgsc.bcm.edu 36 12 51355490 51355510 + In_Frame_Del DEL ACCTCCGGAGCCGTAGCTGCT ACCTCCGGAGCCGTAGCTGCT - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 ACCTCCGGAGCCGTAGCTGCT ACCTCCGGAGCCGTAGCTGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CNTNAP4 85445 hgsc.bcm.edu 36 16 75081167 75081167 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C17orf97 400566 hgsc.bcm.edu 36 17 263602 263631 + Frame_Shift_Del DEL AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ARID1A 8289 hgsc.bcm.edu 36 1 26928924 26928925 + Frame_Shift_Del DEL CT CT - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 CT CT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FAM171B 165215 hgsc.bcm.edu 36 2 187267274 187267275 + In_Frame_Ins INS - - CAG novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 AQP12A 375318 hgsc.bcm.edu 36 2 241280459 241280459 + Frame_Shift_Del DEL G G - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 ULK4 54986 hgsc.bcm.edu 36 3 41835989 41835989 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MUC4 4585 hgsc.bcm.edu 36 3 196996945 196996992 + In_Frame_Del DEL GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG GGTGGCGTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MUC4 4585 hgsc.bcm.edu 36 3 196998195 196998242 + In_Frame_Del DEL TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 MUC4 4585 hgsc.bcm.edu 36 3 196999393 196999440 + In_Frame_Del DEL GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 PPM1K 152926 hgsc.bcm.edu 36 4 89408467 89408468 + Frame_Shift_Ins INS - - C novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 FBXW7 55294 hgsc.bcm.edu 36 4 153470298 153470298 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 APC 324 hgsc.bcm.edu 36 5 112203527 112203527 + Frame_Shift_Del DEL C C - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 SLC12A2 6558 hgsc.bcm.edu 36 5 127550089 127550090 + Frame_Shift_Ins INS - - TC novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KIAA1009 22832 hgsc.bcm.edu 36 6 84953033 84953035 + In_Frame_Del DEL TTC TTC - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 TTC TTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CUBN 8029 hgsc.bcm.edu 36 10 16970443 16970447 + Frame_Shift_Del DEL AAGTC AAGTC - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 AAGTC AAGTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRTAP5-4 387267 hgsc.bcm.edu 36 11 1599823 1599843 + In_Frame_Del DEL GAGCCACAGCCCCCACAGCCG GAGCCACAGCCCCCACAGCCG - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 GAGCCACAGCCCCCACAGCCG GAGCCACAGCCCCCACAGCCG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 HSPA8 3312 hgsc.bcm.edu 36 11 122434220 122434221 + Frame_Shift_Del DEL TC TC - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 TC TC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 KRT1 3848 hgsc.bcm.edu 36 12 51355490 51355510 + In_Frame_Del DEL ACCTCCGGAGCCGTAGCTGCT ACCTCCGGAGCCGTAGCTGCT - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 ACCTCCGGAGCCGTAGCTGCT ACCTCCGGAGCCGTAGCTGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 CNTNAP4 85445 hgsc.bcm.edu 36 16 75081167 75081167 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53 C17orf97 400566 hgsc.bcm.edu 36 17 263602 263631 + Frame_Shift_Del DEL AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT - novel unknown TCGA-DM-A0XD-01A-12D-A152-10 TCGA-DM-A0XD-10A-01D-A152-10 AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 6ae2e7a7-ff54-4d21-9341-f72512cdb48c 20ca6667-823d-4cf1-9c7d-3b0992489a53