Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ETV1 2115 hgsc.bcm.edu 36 7 13942001 13942001 + Silent SNP G G C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BBS9 27241 hgsc.bcm.edu 36 7 33363999 33363999 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 EGFR 1956 hgsc.bcm.edu 36 7 55216637 55216637 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PCLO 27445 hgsc.bcm.edu 36 7 82422119 82422119 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 AKAP9 10142 hgsc.bcm.edu 36 7 91564099 91564099 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PIK3CG 5294 hgsc.bcm.edu 36 7 106332829 106332829 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BRAF 673 hgsc.bcm.edu 36 7 140099605 140099605 + Missense_Mutation SNP A A T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BRAF 673 hgsc.bcm.edu 36 7 140127891 140127891 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GIMAP7 168537 hgsc.bcm.edu 36 7 149848028 149848028 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TGM6 343641 hgsc.bcm.edu 36 20 2325211 2325211 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PAK7 57144 hgsc.bcm.edu 36 20 9508846 9508846 + Silent SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KIF3B 9371 hgsc.bcm.edu 36 20 30378313 30378313 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 UQCC 55245 hgsc.bcm.edu 36 20 33425446 33425446 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SLC5A4 6527 hgsc.bcm.edu 36 22 30955276 30955276 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PRMT5 10419 hgsc.bcm.edu 36 14 22463691 22463691 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PRKD1 5587 hgsc.bcm.edu 36 14 29117272 29117272 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 EXD2 55218 hgsc.bcm.edu 36 14 68771270 68771270 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MLH3 27030 hgsc.bcm.edu 36 14 74578082 74578082 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ISM2 145501 hgsc.bcm.edu 36 14 77020844 77020844 + Missense_Mutation SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ALKBH1 8846 hgsc.bcm.edu 36 14 77210020 77210020 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 S1PR4 8698 hgsc.bcm.edu 36 19 3130338 3130338 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF560 147741 hgsc.bcm.edu 36 19 9442174 9442174 + Missense_Mutation SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SMARCA4 6597 hgsc.bcm.edu 36 19 11006689 11006689 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF440 126070 hgsc.bcm.edu 36 19 11803240 11803240 + Silent SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BEST2 54831 hgsc.bcm.edu 36 19 12725087 12725087 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PGLYRP2 114770 hgsc.bcm.edu 36 19 15451158 15451158 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DDX49 54555 hgsc.bcm.edu 36 19 18899838 18899838 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF493 284443 hgsc.bcm.edu 36 19 21398515 21398515 + Missense_Mutation SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF493 284443 hgsc.bcm.edu 36 19 21398516 21398516 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF585A 199704 hgsc.bcm.edu 36 19 42335257 42335257 + Nonsense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TMC4 147798 hgsc.bcm.edu 36 19 59358258 59358258 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NLRP8 126205 hgsc.bcm.edu 36 19 61158555 61158555 + Missense_Mutation SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZSCAN1 284312 hgsc.bcm.edu 36 19 63241281 63241281 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MYOM2 9172 hgsc.bcm.edu 36 8 2036215 2036215 + Silent SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 LRRC67 286187 hgsc.bcm.edu 36 8 68092495 68092495 + Missense_Mutation SNP A A T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GDF6 392255 hgsc.bcm.edu 36 8 97226117 97226117 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 VPS13B 157680 hgsc.bcm.edu 36 8 100548939 100548939 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TRPS1 7227 hgsc.bcm.edu 36 8 116496210 116496210 + Silent SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SNTB1 6641 hgsc.bcm.edu 36 8 121623244 121623244 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DHDDS 79947 hgsc.bcm.edu 36 1 26646673 26646673 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SESN2 83667 hgsc.bcm.edu 36 1 28478309 28478309 + Silent SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KIAA1522 57648 hgsc.bcm.edu 36 1 33007918 33007918 + Missense_Mutation SNP G G C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PPIE 10450 hgsc.bcm.edu 36 1 39982125 39982125 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 C8B 732 hgsc.bcm.edu 36 1 57198371 57198371 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KANK4 163782 hgsc.bcm.edu 36 1 62512676 62512676 + Nonsense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 COL24A1 255631 hgsc.bcm.edu 36 1 86112922 86112922 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 COL24A1 255631 hgsc.bcm.edu 36 1 86363179 86363179 + Missense_Mutation SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TBX15 6913 hgsc.bcm.edu 36 1 119229522 119229522 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ADAMTSL4 54507 hgsc.bcm.edu 36 1 148792606 148792606 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TCHH 7062 hgsc.bcm.edu 36 1 150347572 150347572 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ARHGAP30 257106 hgsc.bcm.edu 36 1 159285084 159285084 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ACBD6 84320 hgsc.bcm.edu 36 1 178524221 178524221 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 C1orf25 81627 hgsc.bcm.edu 36 1 183392329 183392329 + Missense_Mutation SNP G G C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DNAH14 127602 hgsc.bcm.edu 36 1 223615138 223615138 + Missense_Mutation SNP A A T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 RYR2 6262 hgsc.bcm.edu 36 1 236013933 236013933 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KIF26B 55083 hgsc.bcm.edu 36 1 243914245 243914245 + Silent SNP C C T rs61831276 unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 OR2T10 127069 hgsc.bcm.edu 36 1 246823222 246823222 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 OR14I1 401994 hgsc.bcm.edu 36 1 246911944 246911944 + Missense_Mutation SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PAMR1 25891 hgsc.bcm.edu 36 11 35446136 35446136 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MRE11A 4361 hgsc.bcm.edu 36 11 93844523 93844523 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CARD18 59082 hgsc.bcm.edu 36 11 104514772 104514772 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 VPS11 55823 hgsc.bcm.edu 36 11 118443853 118443853 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 OR8A1 390275 hgsc.bcm.edu 36 11 123945432 123945432 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ROBO3 64221 hgsc.bcm.edu 36 11 124250344 124250344 + Missense_Mutation SNP T T A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 OR2J3 442186 hgsc.bcm.edu 36 6 29188212 29188212 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PKHD1 5314 hgsc.bcm.edu 36 6 51726074 51726074 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GSTA5 221357 hgsc.bcm.edu 36 6 52804630 52804630 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DDX43 55510 hgsc.bcm.edu 36 6 74181942 74181942 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PHIP 55023 hgsc.bcm.edu 36 6 79711818 79711818 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BCKDHB 594 hgsc.bcm.edu 36 6 81039589 81039589 + Silent SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GABRR1 2569 hgsc.bcm.edu 36 6 89945354 89945354 + Nonsense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GRM1 2911 hgsc.bcm.edu 36 6 146392535 146392535 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 LATS1 9113 hgsc.bcm.edu 36 6 150047162 150047162 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SYNE1 23345 hgsc.bcm.edu 36 6 152713002 152713002 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MAP3K4 4216 hgsc.bcm.edu 36 6 161411646 161411646 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 C17orf97 400566 hgsc.bcm.edu 36 17 260458 260458 + Silent SNP T T G rs7503725 by2Hit2Allele;byCluster TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MYO18A 399687 hgsc.bcm.edu 36 17 24517960 24517960 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KRT35 3886 hgsc.bcm.edu 36 17 36887350 36887350 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SAP30BP 29115 hgsc.bcm.edu 36 17 71210211 71210211 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CLDN17 26285 hgsc.bcm.edu 36 21 30460641 30460641 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KRTAP19-1 337882 hgsc.bcm.edu 36 21 30774472 30774472 + Silent SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TPSG1 25823 hgsc.bcm.edu 36 16 1211916 1211916 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PDPK1 5170 hgsc.bcm.edu 36 16 2587127 2587127 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PLA2G15 23659 hgsc.bcm.edu 36 16 66840781 66840781 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CDH3 1013 hgsc.bcm.edu 36 16 67276041 67276041 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 LAMA1 284217 hgsc.bcm.edu 36 18 7032167 7032167 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SMAD4 4089 hgsc.bcm.edu 36 18 46858767 46858767 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ATP8B1 5205 hgsc.bcm.edu 36 18 53549962 53549962 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SERPINB4 6318 hgsc.bcm.edu 36 18 59457925 59457925 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NETO1 81832 hgsc.bcm.edu 36 18 68612458 68612458 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MLH1 4292 hgsc.bcm.edu 36 3 37010046 37010046 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ITGA9 3680 hgsc.bcm.edu 36 3 37835450 37835450 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SCN11A 11280 hgsc.bcm.edu 36 3 38920472 38920472 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MAP4 4134 hgsc.bcm.edu 36 3 48015308 48015308 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TRAIP 10293 hgsc.bcm.edu 36 3 49842089 49842089 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 THOC7 80145 hgsc.bcm.edu 36 3 63799129 63799129 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MYH15 22989 hgsc.bcm.edu 36 3 109707261 109707261 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TFDP2 7029 hgsc.bcm.edu 36 3 143180203 143180203 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CHST2 9435 hgsc.bcm.edu 36 3 144323433 144323433 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PIK3CA 5290 hgsc.bcm.edu 36 3 180434772 180434772 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DCP1B 196513 hgsc.bcm.edu 36 12 1928723 1928723 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KCNA6 3742 hgsc.bcm.edu 36 12 4790003 4790003 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 VWF 7450 hgsc.bcm.edu 36 12 5995616 5995616 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 A2M 2 hgsc.bcm.edu 36 12 9151444 9151444 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PIK3C2G 5288 hgsc.bcm.edu 36 12 18465151 18465151 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PDE3A 5139 hgsc.bcm.edu 36 12 20691142 20691142 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZCRB1 85437 hgsc.bcm.edu 36 12 40993191 40993191 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NCKAP1L 3071 hgsc.bcm.edu 36 12 53179492 53179492 + Silent SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PDE1B 5153 hgsc.bcm.edu 36 12 53247137 53247137 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 LACRT 90070 hgsc.bcm.edu 36 12 53312403 53312403 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ERBB3 2065 hgsc.bcm.edu 36 12 54775808 54775808 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SSH1 54434 hgsc.bcm.edu 36 12 107706953 107706953 + Missense_Mutation SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PTPN11 5781 hgsc.bcm.edu 36 12 111400126 111400126 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 OAS1 4938 hgsc.bcm.edu 36 12 111833292 111833292 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 WDR66 144406 hgsc.bcm.edu 36 12 120884272 120884272 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 RYR3 6263 hgsc.bcm.edu 36 15 31917832 31917832 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 EIF2AK4 440275 hgsc.bcm.edu 36 15 38090787 38090787 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 EXD1 161829 hgsc.bcm.edu 36 15 39264025 39264025 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TRPM7 54822 hgsc.bcm.edu 36 15 48671445 48671445 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TRPM7 54822 hgsc.bcm.edu 36 15 48689162 48689162 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TRPM7 54822 hgsc.bcm.edu 36 15 48707725 48707725 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CCDC33 80125 hgsc.bcm.edu 36 15 72346160 72346160 + Silent SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 RASGRF1 5923 hgsc.bcm.edu 36 15 77069595 77069595 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ACAN 176 hgsc.bcm.edu 36 15 87199348 87199348 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NLGN4X 57502 hgsc.bcm.edu 36 X 5820991 5820991 + Missense_Mutation SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SUV39H1 6839 hgsc.bcm.edu 36 X 48442274 48442274 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 FOXO4 4303 hgsc.bcm.edu 36 X 70233350 70233350 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TAF1 6872 hgsc.bcm.edu 36 X 70596264 70596264 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MAGEE1 728239 hgsc.bcm.edu 36 X 75566473 75566473 + Silent SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BRWD3 254065 hgsc.bcm.edu 36 X 79865988 79865988 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 XKRX 402415 hgsc.bcm.edu 36 X 100056653 100056653 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ALG13 79868 hgsc.bcm.edu 36 X 110889736 110889736 + Silent SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KIAA1210 57481 hgsc.bcm.edu 36 X 118123066 118123066 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MCF2 4168 hgsc.bcm.edu 36 X 138506395 138506395 + Nonsense_Mutation SNP G G C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DUSP9 1852 hgsc.bcm.edu 36 X 152568902 152568902 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GAB3 139716 hgsc.bcm.edu 36 X 153559677 153559677 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 FGFR3 2261 hgsc.bcm.edu 36 4 1777667 1777667 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CRMP1 1400 hgsc.bcm.edu 36 4 5913784 5913784 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GPR125 166647 hgsc.bcm.edu 36 4 22012254 22012254 + Missense_Mutation SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GABRA2 2555 hgsc.bcm.edu 36 4 45958896 45958896 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 HNRNPD 3184 hgsc.bcm.edu 36 4 83496988 83496988 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MTTP 4571 hgsc.bcm.edu 36 4 100761300 100761300 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 EMCN 51705 hgsc.bcm.edu 36 4 101615261 101615261 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 VEGFC 7424 hgsc.bcm.edu 36 4 177845582 177845582 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TPO 7173 hgsc.bcm.edu 36 2 1436584 1436584 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 UBXN2A 165324 hgsc.bcm.edu 36 2 24076102 24076102 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SLC5A6 8884 hgsc.bcm.edu 36 2 27283776 27283776 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 AHSA2 130872 hgsc.bcm.edu 36 2 61267267 61267267 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 FER1L5 90342 hgsc.bcm.edu 36 2 96720968 96720968 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NEB 4703 hgsc.bcm.edu 36 2 152237177 152237177 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 INO80D 54891 hgsc.bcm.edu 36 2 206629728 206629728 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ABCA12 26154 hgsc.bcm.edu 36 2 215562332 215562332 + Missense_Mutation SNP G G T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DNER 92737 hgsc.bcm.edu 36 2 230020320 230020320 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ALPP 250 hgsc.bcm.edu 36 2 232952872 232952872 + Missense_Mutation SNP C C G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 AGTPBP1 23287 hgsc.bcm.edu 36 9 87397398 87397398 + Missense_Mutation SNP T T G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZCCHC6 79670 hgsc.bcm.edu 36 9 88113950 88113950 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PTCH1 5727 hgsc.bcm.edu 36 9 97269360 97269360 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PTCH1 5727 hgsc.bcm.edu 36 9 97284092 97284092 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ALDOB 229 hgsc.bcm.edu 36 9 103228698 103228698 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TMEM38B 55151 hgsc.bcm.edu 36 9 107507713 107507713 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CCBL1 883 hgsc.bcm.edu 36 9 130639888 130639888 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GLT6D1 360203 hgsc.bcm.edu 36 9 137657756 137657756 + Silent SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 LCN9 392399 hgsc.bcm.edu 36 9 137696936 137696936 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NOTCH1 4851 hgsc.bcm.edu 36 9 138522248 138522248 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CACNA1B 774 hgsc.bcm.edu 36 9 140072474 140072474 + Missense_Mutation SNP A A T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GJA3 2700 hgsc.bcm.edu 36 13 19615031 19615031 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SACS 26278 hgsc.bcm.edu 36 13 22847321 22847321 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 LRCH1 23143 hgsc.bcm.edu 36 13 46164749 46164749 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 RB1 5925 hgsc.bcm.edu 36 13 47814848 47814848 + Missense_Mutation SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SLITRK1 114798 hgsc.bcm.edu 36 13 83352550 83352550 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GPC6 10082 hgsc.bcm.edu 36 13 92677790 92677790 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PCCA 5095 hgsc.bcm.edu 36 13 99780824 99780824 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 C10orf18 54906 hgsc.bcm.edu 36 10 5829250 5829250 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SEPHS1 22929 hgsc.bcm.edu 36 10 13415833 13415833 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ITGA8 8516 hgsc.bcm.edu 36 10 15640145 15640145 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PLXDC2 84898 hgsc.bcm.edu 36 10 20493408 20493408 + Silent SNP T T A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 APBB1IP 54518 hgsc.bcm.edu 36 10 26870560 26870560 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PSAP 23787 hgsc.bcm.edu 36 10 73249319 73249319 + Missense_Mutation SNP T T A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PSAP 23787 hgsc.bcm.edu 36 10 73249320 73249320 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PTEN 5728 hgsc.bcm.edu 36 10 89682945 89682945 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 IFIT2 3433 hgsc.bcm.edu 36 10 91056957 91056957 + Nonsense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 RBM20 282996 hgsc.bcm.edu 36 10 112571606 112571606 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SLC9A3 6550 hgsc.bcm.edu 36 5 535201 535201 + Silent SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ADAMTS16 170690 hgsc.bcm.edu 36 5 5372209 5372209 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 C5orf22 55322 hgsc.bcm.edu 36 5 31574388 31574388 + Silent SNP T T C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DHX29 54505 hgsc.bcm.edu 36 5 54615168 54615168 + Missense_Mutation SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 APC 324 hgsc.bcm.edu 36 5 112202643 112202643 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ADAMTS19 171019 hgsc.bcm.edu 36 5 128892266 128892266 + Missense_Mutation SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SLC25A2 83884 hgsc.bcm.edu 36 5 140663573 140663573 + Missense_Mutation SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PCDHGA5 56110 hgsc.bcm.edu 36 5 140725778 140725778 + Missense_Mutation SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 PDE6A 5145 hgsc.bcm.edu 36 5 149304385 149304385 + Silent SNP C C T novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ATP10B 23120 hgsc.bcm.edu 36 5 159949258 159949258 + Silent SNP A A G novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CCDC62 84660 hgsc.bcm.edu 36 12 121831663 121831663 + Splice_Site SNP G G C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 BLM 641 hgsc.bcm.edu 36 15 89113671 89113671 + Splice_Site SNP G G A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ABCC4 10257 hgsc.bcm.edu 36 13 94613375 94613375 + Splice_Site SNP A A C novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 CHUK 1147 hgsc.bcm.edu 36 10 101956976 101956976 + Splice_Site SNP C C A novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 FMN2 56776 hgsc.bcm.edu 36 1 238437537 238437569 + In_Frame_Del DEL GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 FANCD2 2177 hgsc.bcm.edu 36 3 10063408 10063408 + Frame_Shift_Del DEL G G - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF717 100131827 hgsc.bcm.edu 36 3 75869005 75869013 + In_Frame_Del DEL CTACATTCT CTACATTCT - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 CTACATTCT CTACATTCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF717 100131827 hgsc.bcm.edu 36 3 75869732 75869733 + Frame_Shift_Ins INS - - AAAT novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ZNF717 100131827 hgsc.bcm.edu 36 3 75869734 75869735 + In_Frame_Del INS - - CTT novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MUC4 4585 hgsc.bcm.edu 36 3 196991050 196991097 + In_Frame_Del DEL ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MUC4 4585 hgsc.bcm.edu 36 3 196991492 196991539 + In_Frame_Del DEL GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MUC4 4585 hgsc.bcm.edu 36 3 196997889 196997936 + In_Frame_Del DEL TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATAATGAGGAAGCAT TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATAATGAGGAAGCAT - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATAATGAGGAAGCAT TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATAATGAGGAAGCAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 ADAM29 11086 hgsc.bcm.edu 36 4 176135647 176135673 + In_Frame_Del DEL TGACACCCTCCCAGAGGCAACCTCAGT TGACACCCTCCCAGAGGCAACCTCAGT - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 TGACACCCTCCCAGAGGCAACCTCAGT TGACACCCTCCCAGAGGCAACCTCAGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 RNF145 153830 hgsc.bcm.edu 36 5 158563208 158563208 + Frame_Shift_Del DEL T T - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 DPCR1 135656 hgsc.bcm.edu 36 6 31025135 31025191 + In_Frame_Del DEL AGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTAT AGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTAT - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 AGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTAT AGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 SGK223 0 hgsc.bcm.edu 36 8 8272278 8272279 + In_Frame_Ins INS - - GCCGCT novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TIGD5 84948 hgsc.bcm.edu 36 8 144751534 144751535 + In_Frame_Ins INS - - CAA novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 MUC2 4583 hgsc.bcm.edu 36 11 1082802 1082802 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 FAM111B 374393 hgsc.bcm.edu 36 11 58648953 58648953 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 IFI27 3429 hgsc.bcm.edu 36 14 93651883 93651884 + In_Frame_Ins INS - - GGCCATGGC rs3833507 byCluster TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 TP53 7157 hgsc.bcm.edu 36 17 7518965 7518966 + Frame_Shift_Del DEL CA CA - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 CA CA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 KRTAP10-7 386675 hgsc.bcm.edu 36 21 44845084 44845098 + Frame_Shift_Del DEL CTGCTGCGCCCCCAG CTGCTGCGCCCCCAG - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 CTGCTGCGCCCCCAG CTGCTGCGCCCCCAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 NEFH 4744 hgsc.bcm.edu 36 22 28215586 28215587 + In_Frame_Ins INS - - AGTCCCCTGAGAAGGCCA novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435 GABRQ 55879 hgsc.bcm.edu 36 X 151564673 151564674 + Frame_Shift_Del DEL TA TA - novel unknown TCGA-D5-6534-01A-21D-1924-10 TCGA-D5-6534-10A-01D-1924-10 TA TA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b470f332-972b-4e08-8c09-3925d6683fc2 2542ce87-aa5d-4589-92e7-6b02a82bc435