Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID C7orf70 84792 hgsc.bcm.edu 36 7 6337139 6337139 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HIBADH 11112 hgsc.bcm.edu 36 7 27655742 27655742 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CDK13 0 hgsc.bcm.edu 36 7 40003756 40003756 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TBRG4 9238 hgsc.bcm.edu 36 7 45109564 45109564 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PCLO 27445 hgsc.bcm.edu 36 7 82289759 82289759 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SAMD9 54809 hgsc.bcm.edu 36 7 92572371 92572371 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PIK3CG 5294 hgsc.bcm.edu 36 7 106307262 106307262 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DOCK4 9732 hgsc.bcm.edu 36 7 111416347 111416347 + Silent SNP G G A rs34015947 byFrequency TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TES 26136 hgsc.bcm.edu 36 7 115661888 115661888 + Missense_Mutation SNP G G C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 IQUB 154865 hgsc.bcm.edu 36 7 122939601 122939601 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SLC37A3 84255 hgsc.bcm.edu 36 7 139728728 139728728 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 BRAF 673 hgsc.bcm.edu 36 7 140146634 140146634 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SIRPA 140885 hgsc.bcm.edu 36 20 1851109 1851109 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KIF3B 9371 hgsc.bcm.edu 36 20 30378313 30378313 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NCOA6 23054 hgsc.bcm.edu 36 20 32792314 32792314 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ZMYND8 23613 hgsc.bcm.edu 36 20 45308281 45308281 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ARFGEF2 10564 hgsc.bcm.edu 36 20 47038455 47038455 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 STAU1 6780 hgsc.bcm.edu 36 20 47185799 47185799 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AURKA 6790 hgsc.bcm.edu 36 20 54391492 54391492 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CECR2 27443 hgsc.bcm.edu 36 22 16408206 16408206 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 BID 637 hgsc.bcm.edu 36 22 16612895 16612895 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NF2 4771 hgsc.bcm.edu 36 22 28384198 28384198 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KCNJ4 3761 hgsc.bcm.edu 36 22 37152951 37152951 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EP300 2033 hgsc.bcm.edu 36 22 39904630 39904630 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SEPT3 55964 hgsc.bcm.edu 36 22 40707651 40707651 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CHD8 57680 hgsc.bcm.edu 36 14 20943240 20943240 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C14orf39 317761 hgsc.bcm.edu 36 14 59973398 59973398 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C14orf166B 145497 hgsc.bcm.edu 36 14 76396791 76396791 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TSHR 7253 hgsc.bcm.edu 36 14 80680043 80680043 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MIER2 54531 hgsc.bcm.edu 36 19 263207 263207 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ATCAY 85300 hgsc.bcm.edu 36 19 3858802 3858802 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAP2K7 5609 hgsc.bcm.edu 36 19 7874851 7874851 + Nonsense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MUC16 94025 hgsc.bcm.edu 36 19 8950509 8950509 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ZNF317 57693 hgsc.bcm.edu 36 19 9132693 9132693 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ZNF99 7652 hgsc.bcm.edu 36 19 22731099 22731099 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DYRK1B 9149 hgsc.bcm.edu 36 19 45012485 45012485 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CYP2A6 1548 hgsc.bcm.edu 36 19 46044795 46044795 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GLTSCR1 29998 hgsc.bcm.edu 36 19 52893776 52893776 + Nonsense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KLK13 26085 hgsc.bcm.edu 36 19 56253683 56253683 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ZNF432 9668 hgsc.bcm.edu 36 19 57229276 57229276 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LILRA4 23547 hgsc.bcm.edu 36 19 59542151 59542151 + Missense_Mutation SNP A A T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NLRP8 126205 hgsc.bcm.edu 36 19 61159080 61159080 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ZNF460 10794 hgsc.bcm.edu 36 19 62494062 62494062 + Missense_Mutation SNP A A T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CYP7B1 9420 hgsc.bcm.edu 36 8 65671998 65671998 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TRPA1 8989 hgsc.bcm.edu 36 8 73097892 73097892 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CNBD1 168975 hgsc.bcm.edu 36 8 87968939 87968939 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CDH17 1015 hgsc.bcm.edu 36 8 95241476 95241476 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 UBR5 51366 hgsc.bcm.edu 36 8 103428428 103428428 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ENPP2 5168 hgsc.bcm.edu 36 8 120665455 120665455 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MRPL13 28998 hgsc.bcm.edu 36 8 121524698 121524698 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PTK2 5747 hgsc.bcm.edu 36 8 141943603 141943603 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EXOSC4 54512 hgsc.bcm.edu 36 8 145207365 145207365 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CYHR1 50626 hgsc.bcm.edu 36 8 145646704 145646704 + Missense_Mutation SNP G G C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PLEKHN1 84069 hgsc.bcm.edu 36 1 899233 899233 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AGRN 375790 hgsc.bcm.edu 36 1 972634 972634 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SPEN 64783 hgsc.bcm.edu 36 1 16129029 16129029 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ARID1A 8289 hgsc.bcm.edu 36 1 26979449 26979449 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 IL12RB2 3595 hgsc.bcm.edu 36 1 67560091 67560091 + Missense_Mutation SNP T T G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NRAS 4893 hgsc.bcm.edu 36 1 115060277 115060277 + Nonsense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CHD1L 9557 hgsc.bcm.edu 36 1 145218444 145218444 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APH1A 51107 hgsc.bcm.edu 36 1 148507030 148507030 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ASH1L 55870 hgsc.bcm.edu 36 1 153757887 153757887 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 YY1AP1 55249 hgsc.bcm.edu 36 1 153897133 153897133 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FCRL1 115350 hgsc.bcm.edu 36 1 156038512 156038512 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 XCL2 6846 hgsc.bcm.edu 36 1 166777943 166777943 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LMOD1 25802 hgsc.bcm.edu 36 1 200136201 200136201 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 IRF6 3664 hgsc.bcm.edu 36 1 208030850 208030850 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 USH2A 7399 hgsc.bcm.edu 36 1 214128826 214128826 + Nonsense_Mutation SNP A A T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LRDD 55367 hgsc.bcm.edu 36 11 789555 789555 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KCNQ1 3784 hgsc.bcm.edu 36 11 2561264 2561264 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR51T1 401665 hgsc.bcm.edu 36 11 4860129 4860129 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C11orf42 160298 hgsc.bcm.edu 36 11 6188762 6188762 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR5P2 120065 hgsc.bcm.edu 36 11 7774841 7774841 + Silent SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NELL1 4745 hgsc.bcm.edu 36 11 21207545 21207545 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SLC17A6 57084 hgsc.bcm.edu 36 11 22354787 22354787 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 WT1 7490 hgsc.bcm.edu 36 11 32406079 32406079 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR4X1 390113 hgsc.bcm.edu 36 11 48242562 48242562 + Missense_Mutation SNP T T A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C2CD3 26005 hgsc.bcm.edu 36 11 73511754 73511754 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CTSC 1075 hgsc.bcm.edu 36 11 87673437 87673437 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CASP4 837 hgsc.bcm.edu 36 11 104327022 104327022 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GRIA4 2893 hgsc.bcm.edu 36 11 105350363 105350363 + Silent SNP A A T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ATM 472 hgsc.bcm.edu 36 11 107705090 107705090 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CHEK1 1111 hgsc.bcm.edu 36 11 125008323 125008323 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ST3GAL4 6484 hgsc.bcm.edu 36 11 125781606 125781606 + Silent SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DUSP22 56940 hgsc.bcm.edu 36 6 293817 293817 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RIPK1 8737 hgsc.bcm.edu 36 6 3049497 3049497 + Nonsense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GCNT2 2651 hgsc.bcm.edu 36 6 10665268 10665268 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GMNN 51053 hgsc.bcm.edu 36 6 24892315 24892315 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HIST1H1T 3010 hgsc.bcm.edu 36 6 26215997 26215997 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ZNF184 7738 hgsc.bcm.edu 36 6 27527991 27527991 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PGBD1 84547 hgsc.bcm.edu 36 6 28377944 28377944 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR2W1 26692 hgsc.bcm.edu 36 6 29120143 29120143 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DNAH8 1769 hgsc.bcm.edu 36 6 38933327 38933327 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TTBK1 84630 hgsc.bcm.edu 36 6 43359021 43359021 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PKHD1 5314 hgsc.bcm.edu 36 6 51840791 51840791 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GSTA5 221357 hgsc.bcm.edu 36 6 52804629 52804629 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DST 667 hgsc.bcm.edu 36 6 56614797 56614797 + Missense_Mutation SNP A A T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C6orf150 115004 hgsc.bcm.edu 36 6 74191798 74191798 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MTO1 25821 hgsc.bcm.edu 36 6 74248500 74248500 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MCHR2 84539 hgsc.bcm.edu 36 6 100497714 100497714 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LAMA4 3910 hgsc.bcm.edu 36 6 112558954 112558954 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ROS1 6098 hgsc.bcm.edu 36 6 117738053 117738053 + Silent SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PKIB 5570 hgsc.bcm.edu 36 6 123080759 123080759 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GRM1 2911 hgsc.bcm.edu 36 6 146761744 146761744 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LATS1 9113 hgsc.bcm.edu 36 6 150046412 150046412 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SYNE1 23345 hgsc.bcm.edu 36 6 152761519 152761519 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TTLL2 83887 hgsc.bcm.edu 36 6 167675068 167675068 + Nonsense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KIF25 3834 hgsc.bcm.edu 36 6 168173121 168173121 + Missense_Mutation SNP T T A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NLRP1 22861 hgsc.bcm.edu 36 17 5376962 5376962 + Missense_Mutation SNP T T A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TP53 7157 hgsc.bcm.edu 36 17 7518933 7518933 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MYH3 4621 hgsc.bcm.edu 36 17 10476611 10476611 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 VTN 7448 hgsc.bcm.edu 36 17 23720128 23720128 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NLE1 54475 hgsc.bcm.edu 36 17 30487503 30487503 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KRT12 3859 hgsc.bcm.edu 36 17 36273579 36273579 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AOC3 8639 hgsc.bcm.edu 36 17 38258188 38258188 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ITGA3 3675 hgsc.bcm.edu 36 17 45503247 45503247 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ANKFN1 162282 hgsc.bcm.edu 36 17 51806991 51806991 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ABCA6 23460 hgsc.bcm.edu 36 17 64621421 64621421 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CD300LB 124599 hgsc.bcm.edu 36 17 70039182 70039182 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 B3GNTL1 146712 hgsc.bcm.edu 36 17 78599885 78599885 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SAMSN1 64092 hgsc.bcm.edu 36 21 14815379 14815379 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 USP25 29761 hgsc.bcm.edu 36 21 16172024 16172024 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ADAMTS5 11096 hgsc.bcm.edu 36 21 27228697 27228697 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 USP16 27005 hgsc.bcm.edu 36 21 29341424 29341424 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RUNX1 861 hgsc.bcm.edu 36 21 35174791 35174791 + Silent SNP A A T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DSCAM 1826 hgsc.bcm.edu 36 21 40481721 40481721 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CREBBP 1387 hgsc.bcm.edu 36 16 3730521 3730521 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SMG1 23049 hgsc.bcm.edu 36 16 18730824 18730824 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 VWA3A 146177 hgsc.bcm.edu 36 16 22039846 22039846 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RBL2 5934 hgsc.bcm.edu 36 16 52034202 52034202 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CES5A 0 hgsc.bcm.edu 36 16 54465369 54465369 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FAM65A 79567 hgsc.bcm.edu 36 16 66136885 66136885 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HYDIN 54768 hgsc.bcm.edu 36 16 69512516 69512516 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TRAPPC8 0 hgsc.bcm.edu 36 18 27747390 27747390 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SMAD4 4089 hgsc.bcm.edu 36 18 46845917 46845917 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MKRN2 23609 hgsc.bcm.edu 36 3 12585428 12585428 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C3orf20 84077 hgsc.bcm.edu 36 3 14743470 14743470 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CTNNB1 1499 hgsc.bcm.edu 36 3 41241927 41241927 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SETD2 29072 hgsc.bcm.edu 36 3 47133229 47133229 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CELSR3 1951 hgsc.bcm.edu 36 3 48671848 48671848 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CCDC36 339834 hgsc.bcm.edu 36 3 49269669 49269669 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TMEM115 11070 hgsc.bcm.edu 36 3 50371130 50371130 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ALAS1 211 hgsc.bcm.edu 36 3 52215025 52215025 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 BAP1 9223 hgsc.bcm.edu 36 3 52411845 52411845 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SHQ1 55164 hgsc.bcm.edu 36 3 72924844 72924844 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EPHA3 2042 hgsc.bcm.edu 36 3 89473801 89473801 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR5AC2 81050 hgsc.bcm.edu 36 3 99289601 99289601 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CLDND1 56650 hgsc.bcm.edu 36 3 99718362 99718362 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KIAA1524 57650 hgsc.bcm.edu 36 3 109764707 109764707 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ARHGAP31 0 hgsc.bcm.edu 36 3 120566862 120566862 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LRRC58 116064 hgsc.bcm.edu 36 3 121532777 121532777 + Missense_Mutation SNP C C G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 COL6A6 131873 hgsc.bcm.edu 36 3 131772746 131772746 + Silent SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 COL6A6 131873 hgsc.bcm.edu 36 3 131823402 131823402 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EPHB1 2047 hgsc.bcm.edu 36 3 136152945 136152945 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ATR 390502 hgsc.bcm.edu 36 3 143660795 143660795 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TRPC1 7220 hgsc.bcm.edu 36 3 144005547 144005547 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SLC9A9 285195 hgsc.bcm.edu 36 3 144695281 144695281 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 IGSF10 285313 hgsc.bcm.edu 36 3 152646815 152646815 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SLC7A14 57709 hgsc.bcm.edu 36 3 171681274 171681274 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TNIK 23043 hgsc.bcm.edu 36 3 172308612 172308612 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PLD1 5589 hgsc.bcm.edu 36 3 172820936 172820936 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PIK3CA 5290 hgsc.bcm.edu 36 3 180434596 180434596 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PIK3CA 5290 hgsc.bcm.edu 36 3 180434767 180434767 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ADIPOQ 9370 hgsc.bcm.edu 36 3 188055113 188055113 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MASP1 5648 hgsc.bcm.edu 36 3 188436681 188436681 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ATP13A5 344905 hgsc.bcm.edu 36 3 194501733 194501733 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ATP13A5 344905 hgsc.bcm.edu 36 3 194525356 194525356 + Silent SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C12orf5 57103 hgsc.bcm.edu 36 12 4329321 4329321 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CD163 9332 hgsc.bcm.edu 36 12 7531352 7531352 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DENND5B 160518 hgsc.bcm.edu 36 12 31496474 31496474 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MSRB3 253827 hgsc.bcm.edu 36 12 64143317 64143317 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KCNC2 3747 hgsc.bcm.edu 36 12 73887490 73887490 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NUAK1 9891 hgsc.bcm.edu 36 12 105056457 105056457 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C12orf76 400073 hgsc.bcm.edu 36 12 108981191 108981191 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 P2RX7 5027 hgsc.bcm.edu 36 12 120078281 120078281 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GABRB3 2562 hgsc.bcm.edu 36 15 24568703 24568703 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RYR3 6263 hgsc.bcm.edu 36 15 31682813 31682813 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FSIP1 161835 hgsc.bcm.edu 36 15 37697564 37697564 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 B2M 567 hgsc.bcm.edu 36 15 42794921 42794921 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SLC28A2 9153 hgsc.bcm.edu 36 15 43347163 43347163 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TRPM7 54822 hgsc.bcm.edu 36 15 48671445 48671445 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NTRK3 4916 hgsc.bcm.edu 36 15 86480231 86480231 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SV2B 9899 hgsc.bcm.edu 36 15 89570561 89570561 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RBBP7 5931 hgsc.bcm.edu 36 X 16780624 16780624 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NHS 4810 hgsc.bcm.edu 36 X 17620397 17620397 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAGEB1 4112 hgsc.bcm.edu 36 X 30178620 30178620 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PRRG1 5638 hgsc.bcm.edu 36 X 37170052 37170052 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 USP11 8237 hgsc.bcm.edu 36 X 46992174 46992174 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PFKFB1 5207 hgsc.bcm.edu 36 X 54976597 54976597 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RGAG4 340526 hgsc.bcm.edu 36 X 71266865 71266865 + Missense_Mutation SNP T T G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GPR174 84636 hgsc.bcm.edu 36 X 78313903 78313903 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 COL4A5 1287 hgsc.bcm.edu 36 X 107826227 107826227 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 XIAP 331 hgsc.bcm.edu 36 X 122862069 122862069 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ODZ1 10178 hgsc.bcm.edu 36 X 123345737 123345737 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AIFM1 9131 hgsc.bcm.edu 36 X 129098804 129098804 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAGEC1 9947 hgsc.bcm.edu 36 X 140823858 140823858 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAGEA12 4111 hgsc.bcm.edu 36 X 151651264 151651264 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KIT 3815 hgsc.bcm.edu 36 4 55288340 55288340 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 KIT 3815 hgsc.bcm.edu 36 4 55288341 55288341 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GNRHR 2798 hgsc.bcm.edu 36 4 68302523 68302523 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MUC7 4589 hgsc.bcm.edu 36 4 71381416 71381416 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GC 2638 hgsc.bcm.edu 36 4 72848029 72848029 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NAAA 27163 hgsc.bcm.edu 36 4 77065970 77065970 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NUP54 53371 hgsc.bcm.edu 36 4 77258288 77258288 + Silent SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GRID2 2895 hgsc.bcm.edu 36 4 94357012 94357012 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ENPEP 2028 hgsc.bcm.edu 36 4 111654087 111654087 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FGF2 2258 hgsc.bcm.edu 36 4 124032996 124032996 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FAT4 79633 hgsc.bcm.edu 36 4 126458603 126458603 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DCHS2 54798 hgsc.bcm.edu 36 4 155376048 155376048 + Missense_Mutation SNP G G C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DCHS2 54798 hgsc.bcm.edu 36 4 155461500 155461500 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SH3YL1 26751 hgsc.bcm.edu 36 2 221083 221083 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APOB 338 hgsc.bcm.edu 36 2 21079654 21079654 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APOB 338 hgsc.bcm.edu 36 2 21088665 21088665 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GALNT14 79623 hgsc.bcm.edu 36 2 31069357 31069357 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 THADA 63892 hgsc.bcm.edu 36 2 43367629 43367629 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MTIF2 4528 hgsc.bcm.edu 36 2 55327034 55327034 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EFEMP1 2202 hgsc.bcm.edu 36 2 55958420 55958420 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 REL 5966 hgsc.bcm.edu 36 2 60972423 60972423 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CCT4 10575 hgsc.bcm.edu 36 2 61952836 61952836 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EHBP1 23301 hgsc.bcm.edu 36 2 63029715 63029715 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ALMS1 7840 hgsc.bcm.edu 36 2 73570466 73570466 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 EIF5B 9669 hgsc.bcm.edu 36 2 99373550 99373550 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AFF3 3899 hgsc.bcm.edu 36 2 99576740 99576740 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAP3K2 10746 hgsc.bcm.edu 36 2 127799789 127799789 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CCNT2 905 hgsc.bcm.edu 36 2 135427554 135427554 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 THSD7B 80731 hgsc.bcm.edu 36 2 137705264 137705264 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HNMT 3176 hgsc.bcm.edu 36 2 138487892 138487892 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SCN1A 6323 hgsc.bcm.edu 36 2 166567296 166567296 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 XIRP2 129446 hgsc.bcm.edu 36 2 167811899 167811899 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 XIRP2 129446 hgsc.bcm.edu 36 2 167813022 167813022 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HAT1 8520 hgsc.bcm.edu 36 2 172552465 172552465 + Silent SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CDCA7 83879 hgsc.bcm.edu 36 2 173938475 173938475 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MTX2 10651 hgsc.bcm.edu 36 2 176899856 176899856 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TTN 7273 hgsc.bcm.edu 36 2 179218998 179218998 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SSFA2 6744 hgsc.bcm.edu 36 2 182473850 182473850 + Missense_Mutation SNP T T A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DUSP19 142679 hgsc.bcm.edu 36 2 183656522 183656522 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NBEAL1 65065 hgsc.bcm.edu 36 2 203763352 203763352 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 UNC80 285175 hgsc.bcm.edu 36 2 210390007 210390007 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ERBB4 2066 hgsc.bcm.edu 36 2 212275077 212275077 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 WNT6 7475 hgsc.bcm.edu 36 2 219444632 219444632 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 WNT10A 80326 hgsc.bcm.edu 36 2 219463172 219463172 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PGM5 5239 hgsc.bcm.edu 36 9 70303983 70303983 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PRUNE2 158471 hgsc.bcm.edu 36 9 78512437 78512437 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GNA14 9630 hgsc.bcm.edu 36 9 79228879 79228879 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NAA35 0 hgsc.bcm.edu 36 9 87814626 87814626 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PTCH1 5727 hgsc.bcm.edu 36 9 97270898 97270898 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PTCH1 5727 hgsc.bcm.edu 36 9 97287822 97287822 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HABP4 22927 hgsc.bcm.edu 36 9 98260547 98260547 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C9orf174 0 hgsc.bcm.edu 36 9 99111651 99111651 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GALNT12 79695 hgsc.bcm.edu 36 9 100625445 100625445 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 UGCG 7357 hgsc.bcm.edu 36 9 113731767 113731767 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MRRF 92399 hgsc.bcm.edu 36 9 124115425 124115425 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RABGAP1 23637 hgsc.bcm.edu 36 9 124791454 124791454 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OLFML2A 169611 hgsc.bcm.edu 36 9 126612370 126612370 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GOLGA1 2800 hgsc.bcm.edu 36 9 126684035 126684035 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 COL5A1 1289 hgsc.bcm.edu 36 9 136782539 136782539 + Missense_Mutation SNP A A C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TUBB2C 10383 hgsc.bcm.edu 36 9 139256930 139256930 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 XPO4 64328 hgsc.bcm.edu 36 13 20255984 20255984 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DCLK1 9201 hgsc.bcm.edu 36 13 35343430 35343430 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AKAP11 11215 hgsc.bcm.edu 36 13 41775775 41775775 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ESD 2098 hgsc.bcm.edu 36 13 46254892 46254892 + Missense_Mutation SNP C C G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RB1 5925 hgsc.bcm.edu 36 13 47779525 47779525 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RB1 5925 hgsc.bcm.edu 36 13 47931956 47931956 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 IPO5 3843 hgsc.bcm.edu 36 13 97471373 97471373 + Silent SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CUL4A 8451 hgsc.bcm.edu 36 13 112957023 112957023 + Nonsense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PTCHD3 374308 hgsc.bcm.edu 36 10 27740830 27740830 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 RET 5979 hgsc.bcm.edu 36 10 42939221 42939221 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PCDH15 65217 hgsc.bcm.edu 36 10 55643793 55643793 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MYST4 23522 hgsc.bcm.edu 36 10 76451914 76451914 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DLG5 9231 hgsc.bcm.edu 36 10 79235494 79235494 + Missense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 GRID1 2894 hgsc.bcm.edu 36 10 87477690 87477690 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PTEN 5728 hgsc.bcm.edu 36 10 89682844 89682844 + Silent SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TNKS2 80351 hgsc.bcm.edu 36 10 93609341 93609341 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 LOXL4 84171 hgsc.bcm.edu 36 10 100002203 100002203 + Silent SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SEC31B 25956 hgsc.bcm.edu 36 10 102255855 102255855 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SH3PXD2A 9644 hgsc.bcm.edu 36 10 105474109 105474109 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FGFR2 2263 hgsc.bcm.edu 36 10 123237573 123237573 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 DNAH5 1767 hgsc.bcm.edu 36 5 13839382 13839382 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAST4 375449 hgsc.bcm.edu 36 5 66461982 66461982 + Missense_Mutation SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MAST4 375449 hgsc.bcm.edu 36 5 66484431 66484431 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CD180 4064 hgsc.bcm.edu 36 5 66516124 66516124 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MBLAC2 153364 hgsc.bcm.edu 36 5 89792856 89792856 + Nonsense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PJA2 9867 hgsc.bcm.edu 36 5 108745197 108745197 + Silent SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APC 324 hgsc.bcm.edu 36 5 112202836 112202836 + Nonsense_Mutation SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APC 324 hgsc.bcm.edu 36 5 112203134 112203134 + Missense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APC 324 hgsc.bcm.edu 36 5 112203572 112203572 + Missense_Mutation SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APC 324 hgsc.bcm.edu 36 5 112203595 112203595 + Nonsense_Mutation SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APC 324 hgsc.bcm.edu 36 5 112203800 112203800 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APC 324 hgsc.bcm.edu 36 5 112203807 112203807 + Silent SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 AQPEP 0 hgsc.bcm.edu 36 5 115378965 115378965 + Silent SNP T T A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SLC35A4 113829 hgsc.bcm.edu 36 5 139927312 139927312 + Missense_Mutation SNP G G A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PCDHB11 56125 hgsc.bcm.edu 36 5 140560753 140560753 + Missense_Mutation SNP C C A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 PCDHGA2 56113 hgsc.bcm.edu 36 5 140700932 140700932 + Missense_Mutation SNP G G C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NF2 4771 hgsc.bcm.edu 36 22 28400823 28400823 + Splice_Site SNP A A G novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 C6orf201 404220 hgsc.bcm.edu 36 6 4075373 4075373 + Splice_Site SNP A A C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 HEPH 9843 hgsc.bcm.edu 36 X 65392899 65392899 + Splice_Site SNP T T C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SDCCAG3 10807 hgsc.bcm.edu 36 9 138422098 138422098 + Splice_Site SNP C C T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 WDR11 55717 hgsc.bcm.edu 36 10 122652735 122652735 + Splice_Site SNP G G T novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ADC 113451 hgsc.bcm.edu 36 1 33356176 33356177 + Frame_Shift_Ins INS - - C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 TNFAIP6 7130 hgsc.bcm.edu 36 2 151944292 151944292 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FAM171B 165215 hgsc.bcm.edu 36 2 187267292 187267293 + In_Frame_Ins INS - - CAA novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 FANCD2 2177 hgsc.bcm.edu 36 3 10063408 10063408 + Frame_Shift_Del DEL G G - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 ALAS1 211 hgsc.bcm.edu 36 3 52208420 52208421 + Frame_Shift_Ins INS - - A novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR5K4 403278 hgsc.bcm.edu 36 3 99556282 99556282 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 WHSC1 7468 hgsc.bcm.edu 36 4 1927666 1927667 + Frame_Shift_Ins INS - - C novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CYP11B1 1584 hgsc.bcm.edu 36 8 143953497 143953497 + Frame_Shift_Del DEL G G - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MUC2 4583 hgsc.bcm.edu 36 11 1082802 1082802 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR51B5 282763 hgsc.bcm.edu 36 11 5321118 5321134 + Frame_Shift_Del DEL CAGCCCCAGGTCTGTGG CAGCCCCAGGTCTGTGG - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 CAGCCCCAGGTCTGTGG CAGCCCCAGGTCTGTGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 CASP5 838 hgsc.bcm.edu 36 11 104384897 104384897 + Frame_Shift_Del DEL T T - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 APAF1 317 hgsc.bcm.edu 36 12 97617370 97617370 + Frame_Shift_Del DEL C C - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 MSLNL 401827 hgsc.bcm.edu 36 16 770749 770768 + Frame_Shift_Del DEL GTGTGCACGGGTAGGTGACG GTGTGCACGGGTAGGTGACG - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 GTGTGCACGGGTAGGTGACG GTGTGCACGGGTAGGTGACG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 SERPINB11 89778 hgsc.bcm.edu 36 18 59538370 59538373 + Frame_Shift_Del DEL GTAA GTAA - novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 GTAA GTAA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9 NEFH 4744 hgsc.bcm.edu 36 22 28215567 28215568 + In_Frame_Ins INS - - AAGTCCCCTGAGAAGGCC novel unknown TCGA-D5-5538-01A-01D-1650-10 TCGA-D5-5538-10A-02D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c20afb3b-6f4c-4881-96cd-6cd1595c1524 7bf9c78c-ce2a-4919-9856-46c4d11c1ef9