Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID INTS1 26173 hgsc.bcm.edu 36 7 1504978 1504978 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ACTB 60 hgsc.bcm.edu 36 7 5535519 5535519 + Silent SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ABCA13 154664 hgsc.bcm.edu 36 7 48283060 48283060 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TBL2 26608 hgsc.bcm.edu 36 7 72622942 72622942 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GTF2IRD2 84163 hgsc.bcm.edu 36 7 73849401 73849401 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 LRRN3 54674 hgsc.bcm.edu 36 7 110550786 110550786 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MET 8731 hgsc.bcm.edu 36 7 116206082 116206082 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KCND2 3751 hgsc.bcm.edu 36 7 119702622 119702622 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 JHDM1D 80853 hgsc.bcm.edu 36 7 139473063 139473063 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ATG9B 285973 hgsc.bcm.edu 36 7 150345082 150345082 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PLCB1 23236 hgsc.bcm.edu 36 20 8665699 8665699 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CHD6 84181 hgsc.bcm.edu 36 20 39483715 39483715 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CASS4 57091 hgsc.bcm.edu 36 20 54467028 54467028 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TGM1 7051 hgsc.bcm.edu 36 14 23793202 23793202 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SYT16 83851 hgsc.bcm.edu 36 14 61620689 61620689 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TDP1 55775 hgsc.bcm.edu 36 14 89525140 89525140 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MKNK2 2872 hgsc.bcm.edu 36 19 1994171 1994171 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MUC16 94025 hgsc.bcm.edu 36 19 8927117 8927117 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ICAM3 3385 hgsc.bcm.edu 36 19 10305909 10305909 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RAB3D 9545 hgsc.bcm.edu 36 19 11307187 11307187 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ZNF441 126068 hgsc.bcm.edu 36 19 11753138 11753138 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CC2D1A 54862 hgsc.bcm.edu 36 19 13895398 13895398 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KIAA1683 80726 hgsc.bcm.edu 36 19 18238290 18238290 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 FKBP8 23770 hgsc.bcm.edu 36 19 18504019 18504019 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ZNF99 7652 hgsc.bcm.edu 36 19 22733192 22733192 + Nonsense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CEACAM5 1048 hgsc.bcm.edu 36 19 46910891 46910891 + Missense_Mutation SNP G G C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CACNG7 59284 hgsc.bcm.edu 36 19 59136657 59136657 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 STC1 6781 hgsc.bcm.edu 36 8 23764806 23764806 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MCM4 4173 hgsc.bcm.edu 36 8 49037301 49037301 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CHD7 55636 hgsc.bcm.edu 36 8 61913209 61913209 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARFGEF1 10565 hgsc.bcm.edu 36 8 68341919 68341919 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARC 23237 hgsc.bcm.edu 36 8 143692303 143692303 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CAMTA1 23261 hgsc.bcm.edu 36 1 7646015 7646015 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CROCC 9696 hgsc.bcm.edu 36 1 17144625 17144625 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PADI3 51702 hgsc.bcm.edu 36 1 17461237 17461237 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TAF12 6883 hgsc.bcm.edu 36 1 28821047 28821047 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CSMD2 114784 hgsc.bcm.edu 36 1 33884850 33884850 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CSMD2 114784 hgsc.bcm.edu 36 1 33937112 33937112 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GNL2 29889 hgsc.bcm.edu 36 1 37812875 37812875 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MACF1 23499 hgsc.bcm.edu 36 1 39672881 39672881 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 YBX1 4904 hgsc.bcm.edu 36 1 42935445 42935445 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ACOT11 26027 hgsc.bcm.edu 36 1 54839555 54839555 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SLC35D1 23169 hgsc.bcm.edu 36 1 67258703 67258703 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ABCA4 24 hgsc.bcm.edu 36 1 94275484 94275484 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TAF13 6884 hgsc.bcm.edu 36 1 109408709 109408709 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 BCAS2 10286 hgsc.bcm.edu 36 1 114919879 114919879 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SV2A 9900 hgsc.bcm.edu 36 1 148147730 148147730 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ISG20L2 81875 hgsc.bcm.edu 36 1 154959854 154959854 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARHGEF11 9826 hgsc.bcm.edu 36 1 155176066 155176066 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CD1E 913 hgsc.bcm.edu 36 1 156590845 156590845 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PLA2G4A 5321 hgsc.bcm.edu 36 1 185129864 185129864 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ATP2B4 493 hgsc.bcm.edu 36 1 201947826 201947826 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PROX1 5629 hgsc.bcm.edu 36 1 212251629 212251629 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 LBR 3930 hgsc.bcm.edu 36 1 223665755 223665755 + Silent SNP G G C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 IFITM3 10410 hgsc.bcm.edu 36 11 309855 309855 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ZDHHC13 54503 hgsc.bcm.edu 36 11 19148572 19148572 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SLC22A10 387775 hgsc.bcm.edu 36 11 62814454 62814454 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PITPNM1 9600 hgsc.bcm.edu 36 11 67016211 67016211 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SHANK2 22941 hgsc.bcm.edu 36 11 70183654 70183654 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RNF169 254225 hgsc.bcm.edu 36 11 74224688 74224688 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GDPD4 220032 hgsc.bcm.edu 36 11 76621758 76621758 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ODZ4 26011 hgsc.bcm.edu 36 11 78458506 78458506 + Silent SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PCF11 51585 hgsc.bcm.edu 36 11 82558147 82558147 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 DLG2 4355 hgsc.bcm.edu 36 11 84500381 84500381 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ALG9 79796 hgsc.bcm.edu 36 11 111229326 111229326 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SIK3 23387 hgsc.bcm.edu 36 11 116239699 116239699 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KIRREL3 84623 hgsc.bcm.edu 36 11 125896441 125896441 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HIST1H1B 3009 hgsc.bcm.edu 36 6 27943207 27943207 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ZNF76 7629 hgsc.bcm.edu 36 6 35366102 35366102 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TREML4 285852 hgsc.bcm.edu 36 6 41304468 41304468 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ROS1 6098 hgsc.bcm.edu 36 6 117822134 117822134 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PTPRK 5796 hgsc.bcm.edu 36 6 128361691 128361691 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GRM1 2911 hgsc.bcm.edu 36 6 146522389 146522389 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SYNE1 23345 hgsc.bcm.edu 36 6 152779811 152779811 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MAP3K4 4216 hgsc.bcm.edu 36 6 161430421 161430421 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 THBS2 7058 hgsc.bcm.edu 36 6 169379677 169379677 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TP53 7157 hgsc.bcm.edu 36 17 7517628 7517628 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 DNAH2 146754 hgsc.bcm.edu 36 17 7676935 7676935 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RCVRN 5957 hgsc.bcm.edu 36 17 9749064 9749064 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 DNAH9 1770 hgsc.bcm.edu 36 17 11730887 11730887 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARHGAP23 57636 hgsc.bcm.edu 36 17 33892291 33892291 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GPRC5C 55890 hgsc.bcm.edu 36 17 69954622 69954622 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HLCS 3141 hgsc.bcm.edu 36 21 37231489 37231489 + Silent SNP C C T rs61732504 unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RSPH1 89765 hgsc.bcm.edu 36 21 42769117 42769117 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GRIN2A 2903 hgsc.bcm.edu 36 16 9765039 9765039 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 NOD2 64127 hgsc.bcm.edu 36 16 49303034 49303034 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PDP2 57546 hgsc.bcm.edu 36 16 65476656 65476656 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HYDIN 54768 hgsc.bcm.edu 36 16 69707110 69707110 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 EPB41L3 23136 hgsc.bcm.edu 36 18 5406037 5406037 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 LAMA1 284217 hgsc.bcm.edu 36 18 6982560 6982560 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 OSBPL1A 114876 hgsc.bcm.edu 36 18 20000585 20000585 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SMAD4 4089 hgsc.bcm.edu 36 18 46845823 46845823 + Missense_Mutation SNP G G C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SERPINB2 5055 hgsc.bcm.edu 36 18 59715338 59715338 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CNTN6 27255 hgsc.bcm.edu 36 3 1344219 1344219 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GRM7 2917 hgsc.bcm.edu 36 3 7595691 7595691 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 FGD5 152273 hgsc.bcm.edu 36 3 14835765 14835765 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TOP2B 7155 hgsc.bcm.edu 36 3 25631964 25631964 + Nonsense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 AZI2 113451 hgsc.bcm.edu 36 3 28355078 28355078 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ITGA9 3680 hgsc.bcm.edu 36 3 37758238 37758238 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 COL8A1 1295 hgsc.bcm.edu 36 3 100995973 100995973 + Nonsense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PARP9 83666 hgsc.bcm.edu 36 3 123738590 123738590 + Missense_Mutation SNP G G C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ATR 390502 hgsc.bcm.edu 36 3 143668056 143668056 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MME 4321 hgsc.bcm.edu 36 3 156315589 156315589 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PIK3CA 5290 hgsc.bcm.edu 36 3 180410670 180410670 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PIK3CA 5290 hgsc.bcm.edu 36 3 180434756 180434756 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ABCF3 55324 hgsc.bcm.edu 36 3 185388661 185388661 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ACAP2 23527 hgsc.bcm.edu 36 3 196497865 196497865 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KIAA0528 9847 hgsc.bcm.edu 36 12 22562331 22562331 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PRKAG1 5571 hgsc.bcm.edu 36 12 47693139 47693139 + Missense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 BTBD11 121551 hgsc.bcm.edu 36 12 106536182 106536182 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 P2RX7 5027 hgsc.bcm.edu 36 12 120084699 120084699 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TMEM132B 114795 hgsc.bcm.edu 36 12 124704433 124704433 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TMEM132D 121256 hgsc.bcm.edu 36 12 128125359 128125359 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HERC2 8924 hgsc.bcm.edu 36 15 26105371 26105371 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CYBB 1536 hgsc.bcm.edu 36 X 37548294 37548294 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TEX11 56159 hgsc.bcm.edu 36 X 69861895 69861895 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SLC16A2 6567 hgsc.bcm.edu 36 X 73668016 73668016 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GUCY2F 2986 hgsc.bcm.edu 36 X 108605792 108605792 + Silent SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 IL13RA2 3598 hgsc.bcm.edu 36 X 114151552 114151552 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 LONRF3 79836 hgsc.bcm.edu 36 X 118008481 118008481 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ACTRT1 139741 hgsc.bcm.edu 36 X 127012920 127012920 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARHGEF6 9459 hgsc.bcm.edu 36 X 135623181 135623181 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 WFS1 7466 hgsc.bcm.edu 36 4 6339768 6339768 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KIT 3815 hgsc.bcm.edu 36 4 55294044 55294044 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KDR 3791 hgsc.bcm.edu 36 4 55648563 55648563 + Silent SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 POLR2B 5431 hgsc.bcm.edu 36 4 57578609 57578609 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HELQ 113510 hgsc.bcm.edu 36 4 84556969 84556969 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MTTP 4571 hgsc.bcm.edu 36 4 100759233 100759233 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ANK2 287 hgsc.bcm.edu 36 4 114377641 114377641 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ANK2 287 hgsc.bcm.edu 36 4 114497274 114497274 + Missense_Mutation SNP A A T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TRIML2 205860 hgsc.bcm.edu 36 4 189249947 189249947 + Silent SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GTF3C2 2976 hgsc.bcm.edu 36 2 27419707 27419707 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ALK 238 hgsc.bcm.edu 36 2 29269623 29269623 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 EML6 400954 hgsc.bcm.edu 36 2 54940267 54940267 + Missense_Mutation SNP G G C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 FOXI3 344167 hgsc.bcm.edu 36 2 88529074 88529074 + Silent SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MRPS5 64969 hgsc.bcm.edu 36 2 95139419 95139419 + Missense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARHGEF4 50649 hgsc.bcm.edu 36 2 131515410 131515410 + Silent SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 LCT 3938 hgsc.bcm.edu 36 2 136282786 136282786 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HNMT 3176 hgsc.bcm.edu 36 2 138487894 138487894 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SCN3A 6328 hgsc.bcm.edu 36 2 165720557 165720557 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 XIRP2 129446 hgsc.bcm.edu 36 2 167808314 167808314 + Silent SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SP3 6670 hgsc.bcm.edu 36 2 174528862 174528862 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TTN 7273 hgsc.bcm.edu 36 2 179293943 179293943 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TTN 7273 hgsc.bcm.edu 36 2 179300650 179300650 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ASNSD1 54529 hgsc.bcm.edu 36 2 190239832 190239832 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MSTN 2660 hgsc.bcm.edu 36 2 190630391 190630391 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 FN1 2335 hgsc.bcm.edu 36 2 216006396 216006396 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KIAA2026 158358 hgsc.bcm.edu 36 9 5919105 5919105 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 KIAA1797 54914 hgsc.bcm.edu 36 9 20864703 20864703 + Silent SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 HNRNPK 3190 hgsc.bcm.edu 36 9 85782425 85782425 + Missense_Mutation SNP T T A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 NTRK2 4915 hgsc.bcm.edu 36 9 86738939 86738939 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TNC 7134 hgsc.bcm.edu 36 9 116884825 116884825 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SARDH 1757 hgsc.bcm.edu 36 9 135585099 135585099 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SEC16A 9919 hgsc.bcm.edu 36 9 138465632 138465632 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RB1 5925 hgsc.bcm.edu 36 13 47814850 47814850 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 GAD2 2572 hgsc.bcm.edu 36 10 26615386 26615386 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ARHGAP22 58504 hgsc.bcm.edu 36 10 49328843 49328843 + Silent SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CDH23 64072 hgsc.bcm.edu 36 10 73075694 73075694 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PTEN 5728 hgsc.bcm.edu 36 10 89710679 89710679 + Nonsense_Mutation SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PTEN 5728 hgsc.bcm.edu 36 10 89710680 89710680 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 MGEA5 10724 hgsc.bcm.edu 36 10 103540644 103540644 + Missense_Mutation SNP T T C novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TCF7L2 6934 hgsc.bcm.edu 36 10 114895811 114895811 + Nonsense_Mutation SNP C C A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ADAMTS16 170690 hgsc.bcm.edu 36 5 5371278 5371278 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 DAB2 1601 hgsc.bcm.edu 36 5 39418674 39418674 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RNF180 285671 hgsc.bcm.edu 36 5 63545588 63545588 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PIK3R1 5295 hgsc.bcm.edu 36 5 67627866 67627866 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ZFYVE16 9765 hgsc.bcm.edu 36 5 79805382 79805382 + Missense_Mutation SNP T T A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 SEMA6A 57556 hgsc.bcm.edu 36 5 115811359 115811359 + Missense_Mutation SNP C C T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ALDH7A1 501 hgsc.bcm.edu 36 5 125915645 125915645 + Silent SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 PCDHGA7 56108 hgsc.bcm.edu 36 5 140742925 140742925 + Missense_Mutation SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ADAM19 8728 hgsc.bcm.edu 36 5 156868898 156868898 + Silent SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CANX 821 hgsc.bcm.edu 36 5 179082523 179082523 + Missense_Mutation SNP A A G novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 LRRC7 57554 hgsc.bcm.edu 36 1 70274896 70274896 + Splice_Site SNP G G T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TP53 7157 hgsc.bcm.edu 36 17 7517577 7517577 + Splice_Site SNP C C A rs11575997 unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 USP9X 8239 hgsc.bcm.edu 36 X 40906986 40906986 + Splice_Site SNP G G A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RPL22 6146 hgsc.bcm.edu 36 1 6180371 6180372 + Frame_Shift_Ins INS - - T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 RPL5 6125 hgsc.bcm.edu 36 1 93071782 93071785 + Frame_Shift_Del DEL ACAA ACAA - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 ACAA ACAA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 IWS1 55677 hgsc.bcm.edu 36 2 127972221 127972222 + In_Frame_Ins INS - - TCT novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TNFAIP6 7130 hgsc.bcm.edu 36 2 151944292 151944292 + Frame_Shift_Del DEL A A - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 APC 324 hgsc.bcm.edu 36 5 112203392 112203392 + Frame_Shift_Del DEL T T - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 TRAF3IP2 10758 hgsc.bcm.edu 36 6 111987352 111987353 + Frame_Shift_Del INS - - T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CTSL2 1515 hgsc.bcm.edu 36 9 98838693 98838694 + Frame_Shift_Ins INS - - T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CASP5 838 hgsc.bcm.edu 36 11 104383251 104383251 + Frame_Shift_Del DEL T T - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ATXN3 4287 hgsc.bcm.edu 36 14 91607107 91607109 + In_Frame_Del DEL CCT CCT - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 CCT CCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 VASN 114990 hgsc.bcm.edu 36 16 4372497 4372497 + Frame_Shift_Del DEL C C - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 CDRT1 374286 hgsc.bcm.edu 36 17 15463163 15463166 + Frame_Shift_Del DEL TGGG TGGG - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 TGGG TGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 C17orf64 124773 hgsc.bcm.edu 36 17 55854769 55854770 + Frame_Shift_Ins INS - - A novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 ATP8B1 5205 hgsc.bcm.edu 36 18 53479685 53479686 + Frame_Shift_Ins INS - - T novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0 DEFB126 81623 hgsc.bcm.edu 36 20 74311 74312 + Frame_Shift_Del DEL CC CC - novel unknown TCGA-CM-6165-01A-11D-1650-10 TCGA-CM-6165-10A-01D-1650-10 CC CC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 598d953e-9936-4a0f-a418-68b4f4744d59 2b3660ad-c09c-467d-99ab-be82b1488ce0