Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID CARD11 84433 hgsc.bcm.edu 36 7 2944130 2944130 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CARD11 84433 hgsc.bcm.edu 36 7 2951994 2951994 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EIF2AK1 27102 hgsc.bcm.edu 36 7 6052253 6052253 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DGKB 1607 hgsc.bcm.edu 36 7 14184219 14184219 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SNX13 23161 hgsc.bcm.edu 36 7 17821090 17821090 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TWISTNB 221830 hgsc.bcm.edu 36 7 19704533 19704533 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DNAH11 8701 hgsc.bcm.edu 36 7 21704294 21704294 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 URGCP 0 hgsc.bcm.edu 36 7 43883966 43883966 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RAMP3 10268 hgsc.bcm.edu 36 7 45183451 45183451 + Missense_Mutation SNP G G A rs10272187 byCluster;byFrequency;byHapMap TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EGFR 1956 hgsc.bcm.edu 36 7 55209213 55209213 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KIAA1324L 222223 hgsc.bcm.edu 36 7 86379341 86379341 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PEG10 23089 hgsc.bcm.edu 36 7 94132268 94132268 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CYP3A4 1576 hgsc.bcm.edu 36 7 99219616 99219616 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LAMB4 22798 hgsc.bcm.edu 36 7 107483412 107483412 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PNPLA8 50640 hgsc.bcm.edu 36 7 107900190 107900190 + Missense_Mutation SNP T T G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MGAM 8972 hgsc.bcm.edu 36 7 141368614 141368614 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OR2A5 393046 hgsc.bcm.edu 36 7 143378730 143378730 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EZH2 2146 hgsc.bcm.edu 36 7 148154523 148154523 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRBA1 84626 hgsc.bcm.edu 36 7 149061262 149061262 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TMEM176B 28959 hgsc.bcm.edu 36 7 150124587 150124587 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MLL3 58508 hgsc.bcm.edu 36 7 151476195 151476195 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ASXL1 171023 hgsc.bcm.edu 36 20 30486585 30486585 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CDK5RAP1 51654 hgsc.bcm.edu 36 20 31448340 31448340 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NCOA6 23054 hgsc.bcm.edu 36 20 32793676 32793676 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SLC12A5 57468 hgsc.bcm.edu 36 20 44115124 44115124 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OSBPL2 9885 hgsc.bcm.edu 36 20 60280617 60280617 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SMARCB1 6598 hgsc.bcm.edu 36 22 22464007 22464007 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NF2 4771 hgsc.bcm.edu 36 22 28394407 28394407 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SF3A1 10291 hgsc.bcm.edu 36 22 29065183 29065183 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ENTHD1 150350 hgsc.bcm.edu 36 22 38613687 38613687 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MKL1 57591 hgsc.bcm.edu 36 22 39137612 39137612 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TTLL12 23170 hgsc.bcm.edu 36 22 41906864 41906864 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 REM2 161253 hgsc.bcm.edu 36 14 22424358 22424358 + Silent SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TMEM229B 0 hgsc.bcm.edu 36 14 67010126 67010126 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SERPINA9 327657 hgsc.bcm.edu 36 14 94005431 94005431 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 STK11 6794 hgsc.bcm.edu 36 19 1172319 1172319 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TIMM44 10469 hgsc.bcm.edu 36 19 7903586 7903586 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 COL5A3 50509 hgsc.bcm.edu 36 19 9932136 9932136 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SMARCA4 6597 hgsc.bcm.edu 36 19 10958098 10958098 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DAND5 199699 hgsc.bcm.edu 36 19 12941509 12941509 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZNF536 9745 hgsc.bcm.edu 36 19 35627317 35627317 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PLEKHG2 64857 hgsc.bcm.edu 36 19 44607093 44607093 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C19orf54 284325 hgsc.bcm.edu 36 19 45942424 45942424 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KCNN4 3783 hgsc.bcm.edu 36 19 48976720 48976720 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZNF235 9310 hgsc.bcm.edu 36 19 49483755 49483755 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NCR1 9437 hgsc.bcm.edu 36 19 60112559 60112559 + Nonsense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PPP6R1 0 hgsc.bcm.edu 36 19 60439840 60439840 + Silent SNP G G C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PPP6R1 0 hgsc.bcm.edu 36 19 60439864 60439864 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SSC5D 0 hgsc.bcm.edu 36 19 60703956 60703956 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NLRP13 126204 hgsc.bcm.edu 36 19 61099174 61099174 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NLRP8 126205 hgsc.bcm.edu 36 19 61159080 61159080 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ADAM28 10863 hgsc.bcm.edu 36 8 24255117 24255117 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ASH2L 9070 hgsc.bcm.edu 36 8 38083731 38083731 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ADAM18 8749 hgsc.bcm.edu 36 8 39622094 39622094 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ARFGEF1 10565 hgsc.bcm.edu 36 8 68313660 68313660 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CPA6 57094 hgsc.bcm.edu 36 8 68558631 68558631 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RUNX1T1 862 hgsc.bcm.edu 36 8 93067651 93067651 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CDH17 1015 hgsc.bcm.edu 36 8 95241476 95241476 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PKHD1L1 93035 hgsc.bcm.edu 36 8 110526919 110526919 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KLHL38 340359 hgsc.bcm.edu 36 8 124733349 124733349 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DGAT1 8694 hgsc.bcm.edu 36 8 145512960 145512960 + Silent SNP C C G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZNF16 7564 hgsc.bcm.edu 36 8 146127593 146127593 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CHD5 450091 hgsc.bcm.edu 36 1 6106659 6106659 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CHD5 450091 hgsc.bcm.edu 36 1 6126512 6126512 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RERE 473 hgsc.bcm.edu 36 1 8341534 8341534 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C1orf158 93190 hgsc.bcm.edu 36 1 12743396 12743396 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 E2F2 1870 hgsc.bcm.edu 36 1 23709035 23709035 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MYOM3 127294 hgsc.bcm.edu 36 1 24306261 24306261 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 YTHDF2 51441 hgsc.bcm.edu 36 1 28942432 28942432 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTPRU 10076 hgsc.bcm.edu 36 1 29491122 29491122 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZMYM4 9202 hgsc.bcm.edu 36 1 35625679 35625679 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 BEND5 79656 hgsc.bcm.edu 36 1 48966252 48966252 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PRKAA2 5563 hgsc.bcm.edu 36 1 56945833 56945833 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SGIP1 84251 hgsc.bcm.edu 36 1 66920156 66920156 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GTF2B 2959 hgsc.bcm.edu 36 1 89098278 89098278 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NTNG1 84628 hgsc.bcm.edu 36 1 107668440 107668440 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MOV10 4343 hgsc.bcm.edu 36 1 113040589 113040589 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 AP4B1 10717 hgsc.bcm.edu 36 1 114244295 114244295 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SPAG17 200162 hgsc.bcm.edu 36 1 118410915 118410915 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FLAD1 80308 hgsc.bcm.edu 36 1 153227424 153227424 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TRIM46 80128 hgsc.bcm.edu 36 1 153421128 153421128 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FAM20B 9917 hgsc.bcm.edu 36 1 177279865 177279865 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CEP350 9857 hgsc.bcm.edu 36 1 178256389 178256389 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LAMC1 3915 hgsc.bcm.edu 36 1 181366167 181366167 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PPP1R12B 4660 hgsc.bcm.edu 36 1 200673617 200673617 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TRAF5 7188 hgsc.bcm.edu 36 1 209599932 209599932 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MIA3 375056 hgsc.bcm.edu 36 1 220870005 220870005 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CNIH4 29097 hgsc.bcm.edu 36 1 222625630 222625630 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 URB2 9816 hgsc.bcm.edu 36 1 227840192 227840192 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KCNK1 3775 hgsc.bcm.edu 36 1 231869087 231869087 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EXO1 9156 hgsc.bcm.edu 36 1 240102020 240102020 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 STK33 65975 hgsc.bcm.edu 36 11 8440007 8440007 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RAG1 5896 hgsc.bcm.edu 36 11 36553248 36553248 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OR4A16 81327 hgsc.bcm.edu 36 11 54867443 54867443 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OR4C16 219428 hgsc.bcm.edu 36 11 55096435 55096435 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OR8U1 219417 hgsc.bcm.edu 36 11 55899700 55899700 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OR4D9 390199 hgsc.bcm.edu 36 11 59039715 59039715 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MTA2 9219 hgsc.bcm.edu 36 11 62122410 62122410 + Nonsense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NXF1 10482 hgsc.bcm.edu 36 11 62321249 62321249 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PLCB3 5331 hgsc.bcm.edu 36 11 63791487 63791487 + Silent SNP G G A rs28395877 byFrequency TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NRXN2 9379 hgsc.bcm.edu 36 11 64191338 64191338 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PC 5624 hgsc.bcm.edu 36 11 66375126 66375126 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ARRB1 408 hgsc.bcm.edu 36 11 74662819 74662819 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TMEM123 114908 hgsc.bcm.edu 36 11 101777517 101777517 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MLL 4297 hgsc.bcm.edu 36 11 117879845 117879845 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 HINFP 25988 hgsc.bcm.edu 36 11 118506673 118506673 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GCM2 9247 hgsc.bcm.edu 36 6 10982438 10982438 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SCGN 10590 hgsc.bcm.edu 36 6 25778215 25778215 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SPDEF 25803 hgsc.bcm.edu 36 6 34615149 34615149 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ANKS1A 23294 hgsc.bcm.edu 36 6 35093620 35093620 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FANCE 2178 hgsc.bcm.edu 36 6 35531959 35531959 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DNAH8 1769 hgsc.bcm.edu 36 6 38975644 38975644 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PKHD1 5314 hgsc.bcm.edu 36 6 51727562 51727562 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ICK 22858 hgsc.bcm.edu 36 6 52986477 52986477 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KHDRBS2 202559 hgsc.bcm.edu 36 6 62448833 62448833 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LAMA4 3910 hgsc.bcm.edu 36 6 112568718 112568718 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ARHGAP18 93663 hgsc.bcm.edu 36 6 129946931 129946931 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ENPP3 5169 hgsc.bcm.edu 36 6 132037100 132037100 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EYA4 2070 hgsc.bcm.edu 36 6 133831493 133831493 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 HIVEP2 3097 hgsc.bcm.edu 36 6 143132491 143132491 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SYNE1 23345 hgsc.bcm.edu 36 6 152779761 152779761 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 QKI 9444 hgsc.bcm.edu 36 6 163907815 163907815 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DLL1 28514 hgsc.bcm.edu 36 6 170436282 170436282 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TP53 7157 hgsc.bcm.edu 36 17 7517841 7517841 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TP53 7157 hgsc.bcm.edu 36 17 7520256 7520256 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MYOCD 93649 hgsc.bcm.edu 36 17 12607551 12607551 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ALDH3A1 218 hgsc.bcm.edu 36 17 19585943 19585943 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PIGS 94005 hgsc.bcm.edu 36 17 23911287 23911287 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SGK494 124923 hgsc.bcm.edu 36 17 23962914 23962914 + Silent SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RHBDL3 162494 hgsc.bcm.edu 36 17 27640077 27640077 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SLFN13 146857 hgsc.bcm.edu 36 17 30792847 30792847 + Silent SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ACACA 31 hgsc.bcm.edu 36 17 32592987 32592987 + Silent SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MED24 9862 hgsc.bcm.edu 36 17 35438700 35438700 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRTAP3-2 83897 hgsc.bcm.edu 36 17 36409563 36409563 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRT16 3868 hgsc.bcm.edu 36 17 37022394 37022394 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MRPL10 124995 hgsc.bcm.edu 36 17 43259415 43259415 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PPM1E 22843 hgsc.bcm.edu 36 17 54412886 54412886 + Silent SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SCN4A 6329 hgsc.bcm.edu 36 17 59403881 59403881 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MIF4GD 57409 hgsc.bcm.edu 36 17 70775507 70775507 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DNAH17 8632 hgsc.bcm.edu 36 17 73934774 73934774 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 USP16 27005 hgsc.bcm.edu 36 21 29341011 29341011 + Silent SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 COL18A1 80781 hgsc.bcm.edu 36 21 45700640 45700640 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PDIA2 64714 hgsc.bcm.edu 36 16 275425 275425 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZSCAN10 84891 hgsc.bcm.edu 36 16 3082121 3082121 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CREBBP 1387 hgsc.bcm.edu 36 16 3726079 3726079 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CREBBP 1387 hgsc.bcm.edu 36 16 3760641 3760641 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GRIN2A 2903 hgsc.bcm.edu 36 16 9851228 9851228 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SMG1 23049 hgsc.bcm.edu 36 16 18730867 18730867 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 HS3ST4 9951 hgsc.bcm.edu 36 16 26055008 26055008 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 JMJD5 79831 hgsc.bcm.edu 36 16 27129149 27129149 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KIFC3 3801 hgsc.bcm.edu 36 16 56357033 56357033 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ESRP2 80004 hgsc.bcm.edu 36 16 66822689 66822689 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MYOM1 8736 hgsc.bcm.edu 36 18 3178882 3178882 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LAMA1 284217 hgsc.bcm.edu 36 18 6999340 6999340 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TRAPPC8 0 hgsc.bcm.edu 36 18 27724814 27724814 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SMAD4 4089 hgsc.bcm.edu 36 18 46857030 46857030 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ADNP2 22850 hgsc.bcm.edu 36 18 75995427 75995427 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 VHL 7428 hgsc.bcm.edu 36 3 10163212 10163212 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 VHL 7428 hgsc.bcm.edu 36 3 10166618 10166618 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MLH1 4292 hgsc.bcm.edu 36 3 37025328 37025328 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZNF621 285268 hgsc.bcm.edu 36 3 40545904 40545904 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CTNNB1 1499 hgsc.bcm.edu 36 3 41241179 41241179 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TGM4 7047 hgsc.bcm.edu 36 3 44920459 44920459 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SETD2 29072 hgsc.bcm.edu 36 3 47119911 47119911 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SETD2 29072 hgsc.bcm.edu 36 3 47137355 47137355 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ROBO2 6092 hgsc.bcm.edu 36 3 77739731 77739731 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EPHA3 2042 hgsc.bcm.edu 36 3 89342231 89342231 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ABI3BP 25890 hgsc.bcm.edu 36 3 101972474 101972474 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 IMPG2 50939 hgsc.bcm.edu 36 3 102521136 102521136 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ATP6V1A 523 hgsc.bcm.edu 36 3 114999970 114999970 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CCDC37 348807 hgsc.bcm.edu 36 3 127620187 127620187 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TOPBP1 11073 hgsc.bcm.edu 36 3 134839572 134839572 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TXNDC6 347736 hgsc.bcm.edu 36 3 139505121 139505121 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MRAS 22808 hgsc.bcm.edu 36 3 139600067 139600067 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RASA2 5922 hgsc.bcm.edu 36 3 142713784 142713784 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KCNAB1 7881 hgsc.bcm.edu 36 3 157492601 157492601 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SLITRK3 22865 hgsc.bcm.edu 36 3 166389085 166389085 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LRRC31 79782 hgsc.bcm.edu 36 3 171061159 171061159 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PIK3CA 5290 hgsc.bcm.edu 36 3 180399637 180399637 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PIK3CA 5290 hgsc.bcm.edu 36 3 180404104 180404104 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PIK3CA 5290 hgsc.bcm.edu 36 3 180404244 180404244 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PIK3CA 5290 hgsc.bcm.edu 36 3 180434825 180434825 + Silent SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TP63 8626 hgsc.bcm.edu 36 3 190939252 190939252 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LRCH3 84859 hgsc.bcm.edu 36 3 199043531 199043531 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CLEC9A 283420 hgsc.bcm.edu 36 12 10098181 10098181 + Nonsense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C12orf40 283461 hgsc.bcm.edu 36 12 38401072 38401072 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LRRK2 120892 hgsc.bcm.edu 36 12 39020435 39020435 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DIP2B 57609 hgsc.bcm.edu 36 12 49366639 49366639 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRT72 140807 hgsc.bcm.edu 36 12 51267860 51267860 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRT4 3851 hgsc.bcm.edu 36 12 51487840 51487840 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SILV 6490 hgsc.bcm.edu 36 12 54641464 54641464 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RNF41 10193 hgsc.bcm.edu 36 12 54886662 54886662 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MYO1A 4640 hgsc.bcm.edu 36 12 55717628 55717628 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CSRP2 1466 hgsc.bcm.edu 36 12 75776877 75776877 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 USP44 84101 hgsc.bcm.edu 36 12 94451209 94451209 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ANO4 121601 hgsc.bcm.edu 36 12 100014552 100014552 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ANO4 121601 hgsc.bcm.edu 36 12 100029482 100029482 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C12orf42 374470 hgsc.bcm.edu 36 12 102396285 102396285 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SSH1 54434 hgsc.bcm.edu 36 12 107717052 107717052 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CUX2 23316 hgsc.bcm.edu 36 12 110232475 110232475 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GPR109A 338442 hgsc.bcm.edu 36 12 121753766 121753766 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SBNO1 55206 hgsc.bcm.edu 36 12 122376075 122376075 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SPATA5L1 79029 hgsc.bcm.edu 36 15 43500543 43500543 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MAPK6 5597 hgsc.bcm.edu 36 15 50126139 50126139 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CELF6 60677 hgsc.bcm.edu 36 15 70369643 70369643 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CYP1A2 1544 hgsc.bcm.edu 36 15 72834383 72834383 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ADAMTSL3 57188 hgsc.bcm.edu 36 15 82344924 82344924 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ABHD2 11057 hgsc.bcm.edu 36 15 87520227 87520227 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 IQGAP1 8826 hgsc.bcm.edu 36 15 88818857 88818857 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MAN2A2 4122 hgsc.bcm.edu 36 15 89253694 89253694 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CLCN4 1183 hgsc.bcm.edu 36 X 10113171 10113171 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ACE2 59272 hgsc.bcm.edu 36 X 15506330 15506330 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RBBP7 5931 hgsc.bcm.edu 36 X 16780624 16780624 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DCAF8L1 0 hgsc.bcm.edu 36 X 27908186 27908186 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 IL1RAPL1 11141 hgsc.bcm.edu 36 X 29848011 29848011 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CXorf59 286464 hgsc.bcm.edu 36 X 36001367 36001367 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DDX3X 1654 hgsc.bcm.edu 36 X 41091083 41091083 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KCND1 3750 hgsc.bcm.edu 36 X 48704870 48704870 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CCDC22 28952 hgsc.bcm.edu 36 X 48986772 48986772 + Nonsense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CCNB3 85417 hgsc.bcm.edu 36 X 50069948 50069948 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KDM5C 8242 hgsc.bcm.edu 36 X 53262099 53262099 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MTMR8 66036 hgsc.bcm.edu 36 X 63491470 63491470 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 STARD8 9754 hgsc.bcm.edu 36 X 67855087 67855087 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DGAT2L6 347516 hgsc.bcm.edu 36 X 69314229 69314229 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TAF1 6872 hgsc.bcm.edu 36 X 70520545 70520545 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DACH2 117154 hgsc.bcm.edu 36 X 85836795 85836795 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MUM1L1 139221 hgsc.bcm.edu 36 X 105337317 105337317 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MID2 11043 hgsc.bcm.edu 36 X 106970866 106970866 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CAPN6 827 hgsc.bcm.edu 36 X 110380887 110380887 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ODZ1 10178 hgsc.bcm.edu 36 X 123383809 123383809 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CD99L2 83692 hgsc.bcm.edu 36 X 149689456 149689456 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PASD1 139135 hgsc.bcm.edu 36 X 150593171 150593171 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 F8 2157 hgsc.bcm.edu 36 X 153786280 153786280 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OTOP1 133060 hgsc.bcm.edu 36 4 4250428 4250428 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GPR78 27201 hgsc.bcm.edu 36 4 8633673 8633673 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 BOD1L 259282 hgsc.bcm.edu 36 4 13213112 13213112 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PGM2 55276 hgsc.bcm.edu 36 4 37528247 37528247 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ATP10D 57205 hgsc.bcm.edu 36 4 47254714 47254714 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LNX1 84708 hgsc.bcm.edu 36 4 54039585 54039585 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PDGFRA 5156 hgsc.bcm.edu 36 4 54824613 54824613 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PDGFRA 5156 hgsc.bcm.edu 36 4 54856074 54856074 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KIT 3815 hgsc.bcm.edu 36 4 55256653 55256653 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TRAM1L1 133022 hgsc.bcm.edu 36 4 118225163 118225163 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FBXW7 55294 hgsc.bcm.edu 36 4 153468835 153468835 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ADAM29 11086 hgsc.bcm.edu 36 4 176133429 176133429 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TLR3 7098 hgsc.bcm.edu 36 4 187241239 187241239 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ITSN2 50618 hgsc.bcm.edu 36 2 24281637 24281637 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ITSN2 50618 hgsc.bcm.edu 36 2 24378343 24378343 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KIF3C 3797 hgsc.bcm.edu 36 2 26056956 26056956 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NLRC4 58484 hgsc.bcm.edu 36 2 32331088 32331088 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 HEATR5B 54497 hgsc.bcm.edu 36 2 37069438 37069438 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MSH6 2956 hgsc.bcm.edu 36 2 47880110 47880110 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LHCGR 3973 hgsc.bcm.edu 36 2 48768858 48768858 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FAM161A 84140 hgsc.bcm.edu 36 2 61920629 61920629 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MPHOSPH10 10199 hgsc.bcm.edu 36 2 71230612 71230612 + Nonsense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SFTPB 6439 hgsc.bcm.edu 36 2 85746289 85746289 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KDM3A 55818 hgsc.bcm.edu 36 2 86547399 86547399 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MAP4K4 9448 hgsc.bcm.edu 36 2 101822715 101822715 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NXPH2 11249 hgsc.bcm.edu 36 2 139145339 139145339 + Nonsense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SCN3A 6328 hgsc.bcm.edu 36 2 165702870 165702870 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SCN9A 6335 hgsc.bcm.edu 36 2 166859367 166859367 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LRP2 4036 hgsc.bcm.edu 36 2 169771291 169771291 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 LRP2 4036 hgsc.bcm.edu 36 2 169771293 169771293 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SP3 6670 hgsc.bcm.edu 36 2 174528862 174528862 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 WIPF1 7456 hgsc.bcm.edu 36 2 175148305 175148305 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TTN 7273 hgsc.bcm.edu 36 2 179161019 179161019 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TTN 7273 hgsc.bcm.edu 36 2 179245206 179245206 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CCDC141 285025 hgsc.bcm.edu 36 2 179491713 179491713 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ABI2 10152 hgsc.bcm.edu 36 2 203975695 203975695 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DYTN 391475 hgsc.bcm.edu 36 2 207236035 207236035 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ABCA12 26154 hgsc.bcm.edu 36 2 215510577 215510577 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CUL3 8452 hgsc.bcm.edu 36 2 225108591 225108591 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 COL4A4 1286 hgsc.bcm.edu 36 2 227606425 227606425 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NGEF 25791 hgsc.bcm.edu 36 2 233465876 233465876 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CXCR7 57007 hgsc.bcm.edu 36 2 237154598 237154598 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTPRD 5789 hgsc.bcm.edu 36 9 8626779 8626779 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MOBKL2B 79817 hgsc.bcm.edu 36 9 27445339 27445339 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GNAQ 2776 hgsc.bcm.edu 36 9 79602314 79602314 + Silent SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TLE1 7088 hgsc.bcm.edu 36 9 83395679 83395679 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NTRK2 4915 hgsc.bcm.edu 36 9 86475516 86475516 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTCH1 5727 hgsc.bcm.edu 36 9 97281122 97281122 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C5 727 hgsc.bcm.edu 36 9 122778908 122778908 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DDX31 158067 hgsc.bcm.edu 36 9 134527838 134527838 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 SACS 26278 hgsc.bcm.edu 36 13 22810947 22810947 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RNF6 6049 hgsc.bcm.edu 36 13 25687647 25687647 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FLT3 2322 hgsc.bcm.edu 36 13 27542700 27542700 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CCNA1 8900 hgsc.bcm.edu 36 13 35914758 35914758 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 COL4A2 1284 hgsc.bcm.edu 36 13 109889014 109889014 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PRKCQ 5588 hgsc.bcm.edu 36 10 6512858 6512858 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MYO3A 53904 hgsc.bcm.edu 36 10 26503058 26503058 + Missense_Mutation SNP C C A rs35575696 byCluster;byFrequency TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 APBB1IP 54518 hgsc.bcm.edu 36 10 26870559 26870559 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTCHD3 374308 hgsc.bcm.edu 36 10 27727657 27727657 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CSGALNACT2 55454 hgsc.bcm.edu 36 10 42982545 42982545 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NCOA4 8031 hgsc.bcm.edu 36 10 51251343 51251343 + Silent SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PRF1 55893 hgsc.bcm.edu 36 10 72030298 72030298 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MYST4 23522 hgsc.bcm.edu 36 10 76454929 76454929 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 BMPR1A 657 hgsc.bcm.edu 36 10 88673227 88673227 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTEN 5728 hgsc.bcm.edu 36 10 89682780 89682780 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTEN 5728 hgsc.bcm.edu 36 10 89682913 89682913 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PTEN 5728 hgsc.bcm.edu 36 10 89710725 89710725 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 TNKS2 80351 hgsc.bcm.edu 36 10 93580683 93580683 + Silent SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ZFYVE27 118813 hgsc.bcm.edu 36 10 99500131 99500131 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PDZD7 79955 hgsc.bcm.edu 36 10 102773736 102773736 + Silent SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 XPNPEP1 7511 hgsc.bcm.edu 36 10 111620627 111620627 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 VWA2 340706 hgsc.bcm.edu 36 10 116022526 116022526 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GRK5 2869 hgsc.bcm.edu 36 10 121174542 121174542 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C10orf119 79892 hgsc.bcm.edu 36 10 121609371 121609371 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 IRX1 79192 hgsc.bcm.edu 36 5 3649416 3649416 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DHX29 54505 hgsc.bcm.edu 36 5 54615166 54615166 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RGNEF 64283 hgsc.bcm.edu 36 5 73229587 73229587 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CMYA5 202333 hgsc.bcm.edu 36 5 79062782 79062782 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 APC 324 hgsc.bcm.edu 36 5 112203133 112203133 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 APC 324 hgsc.bcm.edu 36 5 112203298 112203298 + Nonsense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 APC 324 hgsc.bcm.edu 36 5 112203534 112203534 + Silent SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 APC 324 hgsc.bcm.edu 36 5 112204048 112204048 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DMXL1 1657 hgsc.bcm.edu 36 5 118534729 118534729 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 FBN2 2201 hgsc.bcm.edu 36 5 127623286 127623286 + Silent SNP A A G novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KDM3B 51780 hgsc.bcm.edu 36 5 137750007 137750007 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 STK10 6793 hgsc.bcm.edu 36 5 171414242 171414242 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 BTNL9 153579 hgsc.bcm.edu 36 5 180407716 180407716 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ROS1 6098 hgsc.bcm.edu 36 6 117772120 117772120 + Splice_Site SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 CDH1 51343 hgsc.bcm.edu 36 16 67410831 67410831 + Splice_Site SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 BAP1 9223 hgsc.bcm.edu 36 3 52414970 52414970 + Splice_Site SNP T T A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 ALS2CR12 130540 hgsc.bcm.edu 36 2 201903491 201903491 + Splice_Site SNP C C A novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RB1 5925 hgsc.bcm.edu 36 13 47928488 47928488 + Splice_Site SNP T T C novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 RPTN 126638 hgsc.bcm.edu 36 1 150395690 150395725 + In_Frame_Del DEL TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 EDAR 10913 hgsc.bcm.edu 36 2 108893837 108893837 + Frame_Shift_Del DEL G G - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DLEC1 9940 hgsc.bcm.edu 36 3 38139075 38139077 + In_Frame_Del DEL ATG ATG - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 ATG ATG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MUC4 4585 hgsc.bcm.edu 36 3 196991050 196991097 + In_Frame_Del DEL ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MUC4 4585 hgsc.bcm.edu 36 3 196991492 196991539 + In_Frame_Del DEL GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MUC4 4585 hgsc.bcm.edu 36 3 196994126 196994173 + In_Frame_Del DEL GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 MUC4 4585 hgsc.bcm.edu 36 3 196997576 196997623 + In_Frame_Del DEL TGACCTGTGGATGCTGAGGAAGCGTCAGTGACAAGAAGAGGGCTGGCG TGACCTGTGGATGCTGAGGAAGCGTCAGTGACAAGAAGAGGGCTGGCG - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 TGACCTGTGGATGCTGAGGAAGCGTCAGTGACAAGAAGAGGGCTGGCG TGACCTGTGGATGCTGAGGAAGCGTCAGTGACAAGAAGAGGGCTGGCG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GPRIN1 114787 hgsc.bcm.edu 36 5 175958728 175958740 + Frame_Shift_Del DEL CAAAGACCCAGGA CAAAGACCCAGGA - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 CAAAGACCCAGGA CAAAGACCCAGGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 GPRIN1 114787 hgsc.bcm.edu 36 5 175958742 175958752 + Frame_Shift_Del DEL CCTCCTTCCTC CCTCCTTCCTC - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 CCTCCTTCCTC CCTCCTTCCTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 DACT2 168002 hgsc.bcm.edu 36 6 168452083 168452084 + In_Frame_Ins INS - - CCCCTGCCGGCA novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 OBP2B 29989 hgsc.bcm.edu 36 9 135074337 135074339 + In_Frame_Del DEL TCC TCC - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 TCC TCC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 B3GNT6 192134 hgsc.bcm.edu 36 11 76429233 76429233 + Frame_Shift_Del DEL T T - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PCDH9 5101 hgsc.bcm.edu 36 13 66699665 66699666 + Frame_Shift_Del DEL AA AA - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 AA AA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 C17orf97 400566 hgsc.bcm.edu 36 17 263602 263631 + Frame_Shift_Del DEL AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRTAP4-1 85285 hgsc.bcm.edu 36 17 36594322 36594378 + Frame_Shift_Del DEL CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 KRTAP9-8 83901 hgsc.bcm.edu 36 17 36648237 36648251 + In_Frame_Del DEL GACCACCTGCTGCAG GACCACCTGCTGCAG - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 GACCACCTGCTGCAG GACCACCTGCTGCAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 POTEC 388468 hgsc.bcm.edu 36 18 14528150 14528151 + Frame_Shift_Ins INS - - T novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 NAPA 9476 hgsc.bcm.edu 36 19 52709925 52709927 + In_Frame_Del DEL AGA AGA - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 AGA AGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759 PPP6R1 0 hgsc.bcm.edu 36 19 60439834 60439864 + Frame_Shift_Del DEL TGGCTGGCCCAGACGGGCCCCCCTGGCCAGC TGGCTGGCCCAGACGGGCCCCCCTGGCCAGC - novel unknown TCGA-CM-5344-01A-21D-1719-10 TCGA-CM-5344-10A-01D-1719-10 TGGCTGGCCCAGACGGGCCCCCCTGGCCAGC TGGCTGGCCCAGACGGGCCCCCCTGGCCAGC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9d134974-c989-45a2-b6db-834e2db72e4e f683ea09-26be-4fef-bca9-daabbb2ac759