Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID SDK1 221935 hgsc.bcm.edu 36 7 4116838 4116838 + Silent SNP C C T rs6980076 unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DNAH11 8701 hgsc.bcm.edu 36 7 21606088 21606088 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DNAH11 8701 hgsc.bcm.edu 36 7 21771668 21771668 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DNAH11 8701 hgsc.bcm.edu 36 7 21780085 21780085 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 AEBP1 165 hgsc.bcm.edu 36 7 44118341 44118341 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 POLD2 5425 hgsc.bcm.edu 36 7 44120941 44120941 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PIK3CG 5294 hgsc.bcm.edu 36 7 106295396 106295396 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MET 8731 hgsc.bcm.edu 36 7 116210644 116210644 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 NUB1 51667 hgsc.bcm.edu 36 7 150688185 150688185 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 C20orf7 79133 hgsc.bcm.edu 36 20 13721838 13721838 + Nonsense_Mutation SNP A A T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SEC23B 10483 hgsc.bcm.edu 36 20 18482976 18482976 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HCK 3055 hgsc.bcm.edu 36 20 30136000 30136000 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PTPRT 11122 hgsc.bcm.edu 36 20 40534534 40534534 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 STK4 6789 hgsc.bcm.edu 36 20 43063264 43063264 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ZDHHC8 29801 hgsc.bcm.edu 36 22 18506825 18506825 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MYO18B 84700 hgsc.bcm.edu 36 22 24681202 24681202 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DRG1 51534 hgsc.bcm.edu 36 22 30149349 30149349 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 LARGE 9215 hgsc.bcm.edu 36 22 32042112 32042112 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PARVB 29780 hgsc.bcm.edu 36 22 42846265 42846265 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CELSR1 9620 hgsc.bcm.edu 36 22 45139795 45139795 + Nonsense_Mutation SNP T T A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DHRS4L2 317749 hgsc.bcm.edu 36 14 23529368 23529368 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KLHDC1 122773 hgsc.bcm.edu 36 14 49276610 49276610 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PLIN5 0 hgsc.bcm.edu 36 19 4476051 4476051 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PRODH2 58510 hgsc.bcm.edu 36 19 40995470 40995470 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ZNF382 84911 hgsc.bcm.edu 36 19 41809860 41809860 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SIRT2 22933 hgsc.bcm.edu 36 19 44061731 44061731 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KIR2DL3 3804 hgsc.bcm.edu 36 19 59950604 59950604 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CSMD1 64478 hgsc.bcm.edu 36 8 3034909 3034909 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RB1CC1 9821 hgsc.bcm.edu 36 8 53698925 53698925 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MOS 55034 hgsc.bcm.edu 36 8 57188161 57188161 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TRAM1 23471 hgsc.bcm.edu 36 8 71658579 71658579 + Missense_Mutation SNP A A C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 EPPK1 83481 hgsc.bcm.edu 36 8 145012795 145012795 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GRINA 2907 hgsc.bcm.edu 36 8 145138182 145138182 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GABRD 2563 hgsc.bcm.edu 36 1 1951367 1951367 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TNFRSF9 3604 hgsc.bcm.edu 36 1 7903501 7903501 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TAS1R2 80834 hgsc.bcm.edu 36 1 19053742 19053742 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KIF17 57576 hgsc.bcm.edu 36 1 20916662 20916662 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 C1QA 712 hgsc.bcm.edu 36 1 22838202 22838202 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SRRM1 10250 hgsc.bcm.edu 36 1 24870629 24870629 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CAP1 10487 hgsc.bcm.edu 36 1 40309751 40309751 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ZFYVE9 9372 hgsc.bcm.edu 36 1 52476925 52476925 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ZYG11A 440590 hgsc.bcm.edu 36 1 53119750 53119750 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DMRTB1 63948 hgsc.bcm.edu 36 1 53699737 53699737 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RPE65 6121 hgsc.bcm.edu 36 1 68668160 68668160 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HORMAD1 84072 hgsc.bcm.edu 36 1 148947432 148947432 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HRNR 388697 hgsc.bcm.edu 36 1 150460011 150460011 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GON4L 54856 hgsc.bcm.edu 36 1 154050090 154050090 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TAGLN2 8407 hgsc.bcm.edu 36 1 158155250 158155250 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PAPPA2 60676 hgsc.bcm.edu 36 1 174831230 174831230 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HMCN1 83872 hgsc.bcm.edu 36 1 184310561 184310561 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 NFASC 23114 hgsc.bcm.edu 36 1 203209995 203209995 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DISP1 84976 hgsc.bcm.edu 36 1 221242668 221242668 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ANO5 203859 hgsc.bcm.edu 36 11 22250961 22250961 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TSPAN18 90139 hgsc.bcm.edu 36 11 44898030 44898030 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 OR4A15 81328 hgsc.bcm.edu 36 11 54892431 54892431 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 OR5D16 390144 hgsc.bcm.edu 36 11 55362908 55362908 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 OR8J1 219477 hgsc.bcm.edu 36 11 55884586 55884586 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KDM2A 22992 hgsc.bcm.edu 36 11 66739977 66739977 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SUV420H1 51111 hgsc.bcm.edu 36 11 67682379 67682379 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SHANK2 22941 hgsc.bcm.edu 36 11 70322235 70322235 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FOLR2 2350 hgsc.bcm.edu 36 11 71610284 71610284 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MYO7A 4647 hgsc.bcm.edu 36 11 76578800 76578800 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FAT3 120114 hgsc.bcm.edu 36 11 92255647 92255647 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ARHGAP32 0 hgsc.bcm.edu 36 11 128349616 128349616 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ADAMTS8 11095 hgsc.bcm.edu 36 11 129780783 129780783 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ATF6B 1388 hgsc.bcm.edu 36 6 32195689 32195689 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GPR115 221393 hgsc.bcm.edu 36 6 47790129 47790129 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DST 667 hgsc.bcm.edu 36 6 56605718 56605718 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SIM1 6492 hgsc.bcm.edu 36 6 100945444 100945444 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 AKD1 221264 hgsc.bcm.edu 36 6 110102101 110102101 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FYN 2534 hgsc.bcm.edu 36 6 112147821 112147821 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SYNE1 23345 hgsc.bcm.edu 36 6 152571021 152571021 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TP53 7157 hgsc.bcm.edu 36 17 7518263 7518263 + Missense_Mutation SNP C C T rs11540652 byHapMap TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TP53 7157 hgsc.bcm.edu 36 17 7519182 7519182 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SPECC1 92521 hgsc.bcm.edu 36 17 20049342 20049342 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MED1 8930 hgsc.bcm.edu 36 17 34820127 34820127 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 WIPF2 147179 hgsc.bcm.edu 36 17 35686900 35686900 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KRTAP4-11 653240 hgsc.bcm.edu 36 17 36527683 36527683 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KRT9 3857 hgsc.bcm.edu 36 17 36979738 36979738 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 AOC3 8639 hgsc.bcm.edu 36 17 38261917 38261917 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MED13 9969 hgsc.bcm.edu 36 17 57414886 57414886 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 NCAM2 4685 hgsc.bcm.edu 36 21 21832135 21832135 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MORC3 23515 hgsc.bcm.edu 36 21 36638867 36638867 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DSCR4 10281 hgsc.bcm.edu 36 21 38348852 38348852 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SLC37A1 54020 hgsc.bcm.edu 36 21 42832751 42832751 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PCNT 5116 hgsc.bcm.edu 36 21 46570796 46570796 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ATP6V0C 527 hgsc.bcm.edu 36 16 2509321 2509321 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 NLRC3 197358 hgsc.bcm.edu 36 16 3554705 3554705 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RSL1D1 26156 hgsc.bcm.edu 36 16 11839184 11839184 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SCNN1B 6338 hgsc.bcm.edu 36 16 23294568 23294568 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FHOD1 29109 hgsc.bcm.edu 36 16 65828083 65828083 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 LDHD 197257 hgsc.bcm.edu 36 16 73704027 73704027 + Silent SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TCF25 22980 hgsc.bcm.edu 36 16 88504543 88504543 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SEMA3G 56920 hgsc.bcm.edu 36 3 52451834 52451834 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RFT1 91869 hgsc.bcm.edu 36 3 53114754 53114754 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DNAH12 201625 hgsc.bcm.edu 36 3 57361267 57361267 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 OR5H1 26341 hgsc.bcm.edu 36 3 99334658 99334658 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ATG3 64422 hgsc.bcm.edu 36 3 113739297 113739297 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 COL6A5 256076 hgsc.bcm.edu 36 3 131633402 131633402 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 LRCH3 84859 hgsc.bcm.edu 36 3 199043533 199043533 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SOX5 6660 hgsc.bcm.edu 36 12 23619896 23619896 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FAM186A 121006 hgsc.bcm.edu 36 12 49043372 49043372 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KRT83 3889 hgsc.bcm.edu 36 12 51001078 51001078 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GLI1 2735 hgsc.bcm.edu 36 12 56145253 56145253 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CAPS2 84698 hgsc.bcm.edu 36 12 73962385 73962385 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 APAF1 317 hgsc.bcm.edu 36 12 97617377 97617377 + Missense_Mutation SNP A A T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ANKS1B 56899 hgsc.bcm.edu 36 12 97725792 97725792 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 NR1H4 9971 hgsc.bcm.edu 36 12 99458718 99458718 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TDG 6996 hgsc.bcm.edu 36 12 102900834 102900834 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 EP400 57634 hgsc.bcm.edu 36 12 131037283 131037283 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CEP152 22995 hgsc.bcm.edu 36 15 46823800 46823800 + Missense_Mutation SNP C C G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CEP152 22995 hgsc.bcm.edu 36 15 46841938 46841938 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 BMX 660 hgsc.bcm.edu 36 X 15450515 15450515 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FTHL17 53940 hgsc.bcm.edu 36 X 30999478 30999478 + Missense_Mutation SNP C C A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MAGEE2 139599 hgsc.bcm.edu 36 X 74921370 74921370 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GAK 2580 hgsc.bcm.edu 36 4 835661 835661 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TBC1D19 55296 hgsc.bcm.edu 36 4 26328695 26328695 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TBC1D19 55296 hgsc.bcm.edu 36 4 26328697 26328697 + Missense_Mutation SNP T T G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ARAP2 116984 hgsc.bcm.edu 36 4 35906937 35906937 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KIAA1239 57495 hgsc.bcm.edu 36 4 37034447 37034447 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GRSF1 2926 hgsc.bcm.edu 36 4 71910721 71910721 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ANK2 287 hgsc.bcm.edu 36 4 114498500 114498500 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TRAM1L1 133022 hgsc.bcm.edu 36 4 118225414 118225414 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MMAA 387254 hgsc.bcm.edu 36 4 146794600 146794600 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SNX25 83891 hgsc.bcm.edu 36 4 186504687 186504687 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HADHB 3032 hgsc.bcm.edu 36 2 26355150 26355150 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CCT4 10575 hgsc.bcm.edu 36 2 61956770 61956770 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ADD2 119 hgsc.bcm.edu 36 2 70759420 70759420 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CTNNA2 1496 hgsc.bcm.edu 36 2 80662388 80662388 + Missense_Mutation SNP A A C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MRPS9 64965 hgsc.bcm.edu 36 2 105082634 105082634 + Missense_Mutation SNP A A C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CNTNAP5 129684 hgsc.bcm.edu 36 2 125388201 125388201 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 POTEF 728378 hgsc.bcm.edu 36 2 130548786 130548786 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SCN9A 6335 hgsc.bcm.edu 36 2 166858000 166858000 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 LRP2 4036 hgsc.bcm.edu 36 2 169752905 169752905 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ITGA4 3676 hgsc.bcm.edu 36 2 182030669 182030669 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ITGA4 3676 hgsc.bcm.edu 36 2 182048154 182048154 + Silent SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RAPH1 65059 hgsc.bcm.edu 36 2 204028509 204028509 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 NCL 4691 hgsc.bcm.edu 36 2 232033507 232033507 + Missense_Mutation SNP T T A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GLIS3 169792 hgsc.bcm.edu 36 9 4108116 4108116 + Silent SNP C C A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HAUS6 54801 hgsc.bcm.edu 36 9 19048102 19048102 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TMOD1 7111 hgsc.bcm.edu 36 9 99366218 99366218 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GPR144 347088 hgsc.bcm.edu 36 9 126277695 126277695 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GARNL3 84253 hgsc.bcm.edu 36 9 129135201 129135201 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FAM102A 399665 hgsc.bcm.edu 36 9 129747536 129747536 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DCLK1 9201 hgsc.bcm.edu 36 13 35584223 35584223 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ZC3H13 23091 hgsc.bcm.edu 36 13 45447684 45447684 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ZC3H13 23091 hgsc.bcm.edu 36 13 45457499 45457499 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RB1 5925 hgsc.bcm.edu 36 13 47935914 47935914 + Missense_Mutation SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DIP2C 22982 hgsc.bcm.edu 36 10 451756 451756 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ARMC3 219681 hgsc.bcm.edu 36 10 23310335 23310335 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 DNAJC12 56521 hgsc.bcm.edu 36 10 69235409 69235409 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TTC18 118491 hgsc.bcm.edu 36 10 74704328 74704328 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PPRC1 23082 hgsc.bcm.edu 36 10 103889080 103889080 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TAF5 6877 hgsc.bcm.edu 36 10 105128118 105128118 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 FOXI2 399823 hgsc.bcm.edu 36 10 129427062 129427062 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PRDM9 56979 hgsc.bcm.edu 36 5 23558507 23558507 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CDH6 1004 hgsc.bcm.edu 36 5 31358864 31358864 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CARD6 84674 hgsc.bcm.edu 36 5 40879380 40879380 + Missense_Mutation SNP T T C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HCN1 348980 hgsc.bcm.edu 36 5 45298015 45298015 + Missense_Mutation SNP G G T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SLCO4C1 353189 hgsc.bcm.edu 36 5 101613336 101613336 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 APC 324 hgsc.bcm.edu 36 5 112156042 112156042 + Nonsense_Mutation SNP C C T rs62619935 unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 APC 324 hgsc.bcm.edu 36 5 112202643 112202643 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 APC 324 hgsc.bcm.edu 36 5 112205205 112205205 + Silent SNP A A G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KDM3B 51780 hgsc.bcm.edu 36 5 137754667 137754667 + Missense_Mutation SNP T T G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CD14 4695 hgsc.bcm.edu 36 5 139991645 139991645 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PCDHA2 56146 hgsc.bcm.edu 36 5 140156997 140156997 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PCDHA13 56136 hgsc.bcm.edu 36 5 140243379 140243379 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PCDHB3 56132 hgsc.bcm.edu 36 5 140462542 140462542 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PCDHB14 56122 hgsc.bcm.edu 36 5 140583487 140583487 + Missense_Mutation SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PCDHGA5 56110 hgsc.bcm.edu 36 5 140870744 140870744 + Missense_Mutation SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RBM27 54439 hgsc.bcm.edu 36 5 145593402 145593402 + Silent SNP A A T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 SH3TC2 79628 hgsc.bcm.edu 36 5 148386896 148386896 + Missense_Mutation SNP G G C novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 GABRA1 2554 hgsc.bcm.edu 36 5 161235168 161235168 + Silent SNP G G A novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TMED9 54732 hgsc.bcm.edu 36 5 176954951 176954951 + Silent SNP C C T novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 C3orf17 25871 hgsc.bcm.edu 36 3 114214941 114214941 + Splice_Site SNP C C G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 TCHH 7062 hgsc.bcm.edu 36 1 150350799 150350800 + In_Frame_Ins INS - - TGCTGCTCGCGCCTCTCC novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MUC4 4585 hgsc.bcm.edu 36 3 196999393 196999440 + In_Frame_Del DEL GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA - novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 PRDM6 93166 hgsc.bcm.edu 36 5 122453870 122453871 + In_Frame_Ins INS - - CCTCCGCCT novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HLA-DQA1 3117 hgsc.bcm.edu 36 6 32717217 32717219 + In_Frame_Del DEL GGT GGT - novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 GGT GGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HLA-DQA1 3117 hgsc.bcm.edu 36 6 32717274 32717275 + Frame_Shift_Ins INS - - G rs9282026 unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 HLA-DQA1 3117 hgsc.bcm.edu 36 6 32717277 32717277 + Frame_Shift_Del DEL A A - novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 ADAMTS8 11095 hgsc.bcm.edu 36 11 129802773 129802773 + Frame_Shift_Del DEL C C - novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 KRT4 3851 hgsc.bcm.edu 36 12 51493869 51493870 + Frame_Shift_Ins INS - - G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 MBD6 114785 hgsc.bcm.edu 36 12 56207998 56207999 + Frame_Shift_Ins INS - - G novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 IFI27 3429 hgsc.bcm.edu 36 14 93651883 93651884 + In_Frame_Ins INS - - GGCCATGGC rs3833507 byCluster TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 CBX4 8535 hgsc.bcm.edu 36 17 75422512 75422513 + In_Frame_Ins INS - - GCCGCC novel unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6 RBM38 55544 hgsc.bcm.edu 36 20 55400099 55400100 + Frame_Shift_Ins INS - - C rs11481309 unknown TCGA-CM-5341-01A-01D-1408-10 TCGA-CM-5341-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 80160793-6b74-4edd-8ee7-8df8bed27eba c021c7fb-12c2-4c65-aa7e-c236c627dff6