Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID WIPF3 644150 hgsc.bcm.edu 36 7 29882023 29882023 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MAGI2 9863 hgsc.bcm.edu 36 7 77813252 77813252 + Missense_Mutation SNP G G T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SMURF1 57154 hgsc.bcm.edu 36 7 98492778 98492778 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CTTNBP2 83992 hgsc.bcm.edu 36 7 117152523 117152523 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 TAS2R3 50831 hgsc.bcm.edu 36 7 141110936 141110936 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MLL3 58508 hgsc.bcm.edu 36 7 151509575 151509575 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MLL3 58508 hgsc.bcm.edu 36 7 151593142 151593142 + Silent SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SNPH 9751 hgsc.bcm.edu 36 20 1225811 1225811 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PAK7 57144 hgsc.bcm.edu 36 20 9494783 9494783 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ISM1 140862 hgsc.bcm.edu 36 20 13208457 13208457 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SSTR4 6754 hgsc.bcm.edu 36 20 22964520 22964520 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 DNMT3B 1789 hgsc.bcm.edu 36 20 30836239 30836239 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SRMS 6725 hgsc.bcm.edu 36 20 61642623 61642623 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MYO18B 84700 hgsc.bcm.edu 36 22 24494210 24494210 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MUC16 94025 hgsc.bcm.edu 36 19 8822961 8822961 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MUC16 94025 hgsc.bcm.edu 36 19 8910153 8910153 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZNF254 9534 hgsc.bcm.edu 36 19 24101338 24101338 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CCNE1 898 hgsc.bcm.edu 36 19 35006479 35006479 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 KIR2DL3 3804 hgsc.bcm.edu 36 19 59955724 59955724 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZSCAN4 201516 hgsc.bcm.edu 36 19 62881725 62881725 + Nonsense_Mutation SNP T T A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 AGPAT5 55326 hgsc.bcm.edu 36 8 6592756 6592756 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PSD3 23362 hgsc.bcm.edu 36 8 18458108 18458108 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SULF1 23213 hgsc.bcm.edu 36 8 70698949 70698949 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PTDSS1 9791 hgsc.bcm.edu 36 8 97381174 97381174 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 RIMS2 9699 hgsc.bcm.edu 36 8 104993524 104993524 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 TRPS1 7227 hgsc.bcm.edu 36 8 116495515 116495515 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ARC 23237 hgsc.bcm.edu 36 8 143691855 143691855 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZNF644 84146 hgsc.bcm.edu 36 1 91179342 91179342 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 S1PR1 1901 hgsc.bcm.edu 36 1 101477919 101477919 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 FLG2 388698 hgsc.bcm.edu 36 1 150590681 150590681 + Missense_Mutation SNP G G C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ISG20L2 81875 hgsc.bcm.edu 36 1 154963387 154963387 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 C1orf129 80133 hgsc.bcm.edu 36 1 169219281 169219281 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 RGSL1 353299 hgsc.bcm.edu 36 1 180784562 180784562 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 EPRS 2058 hgsc.bcm.edu 36 1 218223219 218223219 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MARK1 4139 hgsc.bcm.edu 36 1 218875425 218875425 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 NVL 4931 hgsc.bcm.edu 36 1 222558155 222558155 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 OBSCN 84033 hgsc.bcm.edu 36 1 226511217 226511217 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PCNXL2 80003 hgsc.bcm.edu 36 1 231186712 231186712 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 KCNK1 3775 hgsc.bcm.edu 36 1 231869087 231869087 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 EXO1 9156 hgsc.bcm.edu 36 1 240102021 240102021 + Silent SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 OR2T27 403239 hgsc.bcm.edu 36 1 246880439 246880439 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SLC17A6 57084 hgsc.bcm.edu 36 11 22354787 22354787 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 QSER1 79832 hgsc.bcm.edu 36 11 32912004 32912004 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 FAT3 120114 hgsc.bcm.edu 36 11 92173918 92173918 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 NCAM1 4684 hgsc.bcm.edu 36 11 112581496 112581496 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZKSCAN3 80317 hgsc.bcm.edu 36 6 28435525 28435525 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 HLA-DPA1 3113 hgsc.bcm.edu 36 6 33144442 33144442 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 VTA1 51534 hgsc.bcm.edu 36 6 142510147 142510147 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 NLRP1 22861 hgsc.bcm.edu 36 17 5376988 5376988 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MYH3 4621 hgsc.bcm.edu 36 17 10482221 10482221 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ABCA9 10350 hgsc.bcm.edu 36 17 64558771 64558771 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 GCFC1 0 hgsc.bcm.edu 36 21 33056285 33056285 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 TIGD7 91151 hgsc.bcm.edu 36 16 3290316 3290316 + Silent SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 HEATR3 55027 hgsc.bcm.edu 36 16 48666995 48666995 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 DPEP3 64180 hgsc.bcm.edu 36 16 66567590 66567590 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 HYDIN 54768 hgsc.bcm.edu 36 16 69425433 69425433 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 HYDIN 54768 hgsc.bcm.edu 36 16 69492550 69492550 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CD226 10666 hgsc.bcm.edu 36 18 65713993 65713993 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SOCS6 9306 hgsc.bcm.edu 36 18 66143906 66143906 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CTNNB1 1499 hgsc.bcm.edu 36 3 41241108 41241108 + Missense_Mutation SNP G G T rs28931589 unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CCR3 1232 hgsc.bcm.edu 36 3 46281820 46281820 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PLXNB1 5364 hgsc.bcm.edu 36 3 48431359 48431359 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CD86 942 hgsc.bcm.edu 36 3 123307874 123307874 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 UROC1 131669 hgsc.bcm.edu 36 3 127709314 127709314 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 TRIM42 287015 hgsc.bcm.edu 36 3 141889681 141889681 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PLSCR4 57088 hgsc.bcm.edu 36 3 147397150 147397150 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PIK3CA 5290 hgsc.bcm.edu 36 3 180418766 180418766 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PIK3CA 5290 hgsc.bcm.edu 36 3 180418777 180418777 + Missense_Mutation SNP A A C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZNF639 51193 hgsc.bcm.edu 36 3 180528822 180528822 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CACNA2D4 93589 hgsc.bcm.edu 36 12 1854093 1854093 + Missense_Mutation SNP C C A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 KCNA5 3741 hgsc.bcm.edu 36 12 5024568 5024568 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 KRAS 3845 hgsc.bcm.edu 36 12 25289552 25289552 + Missense_Mutation SNP C C A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MLL2 9757 hgsc.bcm.edu 36 12 47724309 47724309 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 LGR5 8549 hgsc.bcm.edu 36 12 70264198 70264198 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 IFT81 28981 hgsc.bcm.edu 36 12 109065707 109065707 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 DISP2 85455 hgsc.bcm.edu 36 15 38448789 38448789 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 APH1B 83464 hgsc.bcm.edu 36 15 61358526 61358526 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 KDM6A 7403 hgsc.bcm.edu 36 X 44814086 44814086 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SYP 6855 hgsc.bcm.edu 36 X 48936734 48936734 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 NOX1 27035 hgsc.bcm.edu 36 X 99991454 99991454 + Missense_Mutation SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 H2BFWT 158983 hgsc.bcm.edu 36 X 103154763 103154763 + Silent SNP C C A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 TBC1D8B 54885 hgsc.bcm.edu 36 X 105950874 105950874 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 STAP1 26228 hgsc.bcm.edu 36 4 68129749 68129749 + Silent SNP T T G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SLC25A31 83447 hgsc.bcm.edu 36 4 128871266 128871266 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PALLD 23022 hgsc.bcm.edu 36 4 170061529 170061529 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ADAM29 11086 hgsc.bcm.edu 36 4 176135488 176135488 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 GMCL1 64395 hgsc.bcm.edu 36 2 69935490 69935490 + Silent SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 DNAH6 1768 hgsc.bcm.edu 36 2 84780259 84780259 + Missense_Mutation SNP C C G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 NXPH2 11249 hgsc.bcm.edu 36 2 139145337 139145337 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 LRP1B 53353 hgsc.bcm.edu 36 2 140969612 140969612 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SLC38A11 151258 hgsc.bcm.edu 36 2 165504213 165504213 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 LRP2 4036 hgsc.bcm.edu 36 2 169717636 169717636 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZNF804A 91752 hgsc.bcm.edu 36 2 185511058 185511058 + Missense_Mutation SNP A A C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 FAM171B 165215 hgsc.bcm.edu 36 2 187335568 187335568 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 WDR75 84128 hgsc.bcm.edu 36 2 190048276 190048276 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 FAM75D1 0 hgsc.bcm.edu 36 9 83796515 83796515 + Nonsense_Mutation SNP C C A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZDHHC12 84885 hgsc.bcm.edu 36 9 130523388 130523388 + Nonsense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SPATA13 221178 hgsc.bcm.edu 36 13 23766945 23766945 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MTUS2 0 hgsc.bcm.edu 36 13 28975281 28975281 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 FRY 10129 hgsc.bcm.edu 36 13 31666298 31666298 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 RB1 5925 hgsc.bcm.edu 36 13 47937190 47937190 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SLITRK6 84189 hgsc.bcm.edu 36 13 85267452 85267452 + Missense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 COL4A2 1284 hgsc.bcm.edu 36 13 109956800 109956800 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PTEN 5728 hgsc.bcm.edu 36 10 89682879 89682879 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PTEN 5728 hgsc.bcm.edu 36 10 89710680 89710680 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PLCE1 51196 hgsc.bcm.edu 36 10 96043366 96043366 + Missense_Mutation SNP T T G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 LOXL4 84171 hgsc.bcm.edu 36 10 100012606 100012606 + Nonsense_Mutation SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ABCC2 1244 hgsc.bcm.edu 36 10 101568632 101568632 + Silent SNP T T C novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PHF15 23338 hgsc.bcm.edu 36 5 133942275 133942275 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PCDHA13 56136 hgsc.bcm.edu 36 5 140243822 140243822 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PCDHB3 56132 hgsc.bcm.edu 36 5 140461006 140461006 + Missense_Mutation SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PCDHB6 56130 hgsc.bcm.edu 36 5 140511357 140511357 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 PCDHB7 56129 hgsc.bcm.edu 36 5 140533998 140533998 + Silent SNP C C T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 SPINK6 404203 hgsc.bcm.edu 36 5 147573744 147573744 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ITK 3702 hgsc.bcm.edu 36 5 156540605 156540605 + Missense_Mutation SNP G G T novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ATP10B 23120 hgsc.bcm.edu 36 5 159958512 159958512 + Missense_Mutation SNP A A G novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 COL18A1 80781 hgsc.bcm.edu 36 21 45735657 45735657 + Splice_Site SNP G G A novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MUC4 4585 hgsc.bcm.edu 36 3 196998195 196998242 + In_Frame_Del DEL TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA TGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MUC4 4585 hgsc.bcm.edu 36 3 196999393 196999440 + In_Frame_Del DEL GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 MUC4 4585 hgsc.bcm.edu 36 3 196999762 196999809 + In_Frame_Del DEL GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 CRIPAK 285464 hgsc.bcm.edu 36 4 1378594 1378622 + Frame_Shift_Del DEL CACGTGCCCATGTGGAGTGCCCGCCTGCT CACGTGCCCATGTGGAGTGCCCGCCTGCT - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 CACGTGCCCATGTGGAGTGCCCGCCTGCT CACGTGCCCATGTGGAGTGCCCGCCTGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 EYS 346007 hgsc.bcm.edu 36 6 65074937 65074938 + Frame_Shift_Del DEL GA GA - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 GA GA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ALDH3B1 221 hgsc.bcm.edu 36 11 67551954 67551955 + Frame_Shift_Ins INS - - C rs11436139 unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 KRTAP4-5 85289 hgsc.bcm.edu 36 17 36559326 36559340 + In_Frame_Del DEL TGGATTCACAGCAAT TGGATTCACAGCAAT - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 TGGATTCACAGCAAT TGGATTCACAGCAAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 OR7E24 26648 hgsc.bcm.edu 36 19 9222741 9222741 + Frame_Shift_Del DEL T T - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 ZNF568 374900 hgsc.bcm.edu 36 19 42132586 42132586 + Frame_Shift_Del DEL T T - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 RHBDD3 25807 hgsc.bcm.edu 36 22 27991544 27991546 + In_Frame_Del DEL CAG CAG - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 CAG CAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54 OFD1 8481 hgsc.bcm.edu 36 X 13674867 13674867 + Frame_Shift_Del DEL A A - novel unknown TCGA-CM-4747-01A-01D-1408-10 TCGA-CM-4747-10A-01D-1408-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 09a186e7-5839-4087-98f4-c83fe2f79f76 5f83a307-810b-4e93-91d6-8983420d8e54