Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID MICALL2 79778 hgsc.bcm.edu 36 7 1444096 1444096 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 EGFR 1956 hgsc.bcm.edu 36 7 55178659 55178659 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GTF2IRD2B 389524 hgsc.bcm.edu 36 7 74202557 74202557 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SEMA3C 10512 hgsc.bcm.edu 36 7 80277935 80277935 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KIAA1324L 222223 hgsc.bcm.edu 36 7 86412281 86412281 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SLC25A13 10165 hgsc.bcm.edu 36 7 95637369 95637369 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ASNS 440 hgsc.bcm.edu 36 7 97336246 97336246 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SRRT 51593 hgsc.bcm.edu 36 7 100320835 100320835 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ARMC10 83787 hgsc.bcm.edu 36 7 102526016 102526016 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MET 8731 hgsc.bcm.edu 36 7 116127036 116127036 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 C7orf58 79974 hgsc.bcm.edu 36 7 120443089 120443089 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SEL1L2 80343 hgsc.bcm.edu 36 20 13816464 13816464 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ASXL1 171023 hgsc.bcm.edu 36 20 30486253 30486253 + Nonsense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ACSS2 55902 hgsc.bcm.edu 36 20 32964612 32964612 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TTI1 0 hgsc.bcm.edu 36 20 36068177 36068177 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TTI1 0 hgsc.bcm.edu 36 20 36073849 36073849 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 BMP7 655 hgsc.bcm.edu 36 20 55181667 55181667 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 C20orf177 63939 hgsc.bcm.edu 36 20 57953240 57953240 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SOX18 54345 hgsc.bcm.edu 36 20 62150996 62150996 + Missense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PI4KA 5297 hgsc.bcm.edu 36 22 19449209 19449209 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RALGAPA1 0 hgsc.bcm.edu 36 14 35109627 35109627 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NIN 51199 hgsc.bcm.edu 36 14 50306875 50306875 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 STK11 6794 hgsc.bcm.edu 36 19 1171416 1171416 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MUC16 94025 hgsc.bcm.edu 36 19 8923116 8923116 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CATSPERG 0 hgsc.bcm.edu 36 19 43553176 43553176 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 IL28B 282617 hgsc.bcm.edu 36 19 44426627 44426627 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TPRX1 284355 hgsc.bcm.edu 36 19 52996958 52996958 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 LIG1 26018 hgsc.bcm.edu 36 19 53348953 53348953 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 LILRA4 23547 hgsc.bcm.edu 36 19 59540575 59540575 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PTPRH 5794 hgsc.bcm.edu 36 19 60408623 60408623 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZNF264 9422 hgsc.bcm.edu 36 19 62414569 62414569 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZNF805 390980 hgsc.bcm.edu 36 19 62456333 62456333 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 EFHA2 286097 hgsc.bcm.edu 36 8 17018340 17018340 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ANK1 286 hgsc.bcm.edu 36 8 41671928 41671928 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SOX17 64321 hgsc.bcm.edu 36 8 55533518 55533518 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RP1 10982 hgsc.bcm.edu 36 8 55697277 55697277 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CYP7A1 1581 hgsc.bcm.edu 36 8 59571933 59571933 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PRDM14 63978 hgsc.bcm.edu 36 8 71127069 71127069 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 VPS13B 157680 hgsc.bcm.edu 36 8 100858342 100858342 + Missense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TRPS1 7227 hgsc.bcm.edu 36 8 116686332 116686332 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 OC90 729330 hgsc.bcm.edu 36 8 133106144 133106144 + Nonsense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NOL9 79707 hgsc.bcm.edu 36 1 6533078 6533078 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 UBE4B 10277 hgsc.bcm.edu 36 1 10134206 10134206 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KAZ 0 hgsc.bcm.edu 36 1 14798105 14798105 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MAP7D1 55700 hgsc.bcm.edu 36 1 36418126 36418126 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MYCL1 4610 hgsc.bcm.edu 36 1 40135683 40135683 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZRANB2 9406 hgsc.bcm.edu 36 1 71305161 71305161 + Missense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NEXN 91624 hgsc.bcm.edu 36 1 78167590 78167590 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZNF644 84146 hgsc.bcm.edu 36 1 91177509 91177509 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 C1orf59 113802 hgsc.bcm.edu 36 1 108998946 108998946 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ADAMTSL4 54507 hgsc.bcm.edu 36 1 148794657 148794657 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 THEM5 284486 hgsc.bcm.edu 36 1 150087374 150087374 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 S100A2 6273 hgsc.bcm.edu 36 1 151800574 151800574 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FAM78B 149297 hgsc.bcm.edu 36 1 164306214 164306214 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TNR 7143 hgsc.bcm.edu 36 1 173560159 173560159 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SOAT1 6646 hgsc.bcm.edu 36 1 177577876 177577876 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CENPF 1063 hgsc.bcm.edu 36 1 212882146 212882146 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DNAH14 127602 hgsc.bcm.edu 36 1 223634603 223634603 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ACTN2 88 hgsc.bcm.edu 36 1 234967079 234967079 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CTR9 9646 hgsc.bcm.edu 36 11 10734923 10734923 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TSPAN18 90139 hgsc.bcm.edu 36 11 44888001 44888001 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RAPSN 5913 hgsc.bcm.edu 36 11 47426213 47426213 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 OR5L1 219437 hgsc.bcm.edu 36 11 55336121 55336121 + Silent SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GANAB 23193 hgsc.bcm.edu 36 11 62156618 62156618 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 UVRAG 7405 hgsc.bcm.edu 36 11 75268629 75268629 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 LRRC32 2615 hgsc.bcm.edu 36 11 76049623 76049623 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ATM 472 hgsc.bcm.edu 36 11 107677634 107677634 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ATM 472 hgsc.bcm.edu 36 11 107686193 107686193 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ANKK1 255239 hgsc.bcm.edu 36 11 112772112 112772112 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CBL 867 hgsc.bcm.edu 36 11 118653682 118653682 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PATE3 100169851 hgsc.bcm.edu 36 11 125165655 125165655 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RPP40 10799 hgsc.bcm.edu 36 6 4944032 4944032 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 HIVEP1 3096 hgsc.bcm.edu 36 6 12230598 12230598 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 OR5V1 81696 hgsc.bcm.edu 36 6 29431065 29431065 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MOG 4340 hgsc.bcm.edu 36 6 29735275 29735275 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 VPS52 6293 hgsc.bcm.edu 36 6 33344332 33344332 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ABCC10 89845 hgsc.bcm.edu 36 6 43522125 43522125 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SUPT3H 8464 hgsc.bcm.edu 36 6 45079475 45079475 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TFAP2D 83741 hgsc.bcm.edu 36 6 50848344 50848344 + Silent SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SIM1 6492 hgsc.bcm.edu 36 6 101004195 101004195 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 LAMA2 3908 hgsc.bcm.edu 36 6 129517349 129517349 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SAMD3 154075 hgsc.bcm.edu 36 6 130507387 130507387 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SYNE1 23345 hgsc.bcm.edu 36 6 152671412 152671412 + Nonsense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 OPRM1 4988 hgsc.bcm.edu 36 6 154454078 154454078 + Silent SNP G G A rs1799975 byCluster;byFrequency TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FNDC1 84624 hgsc.bcm.edu 36 6 159556148 159556148 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NLRP1 22861 hgsc.bcm.edu 36 17 5403932 5403932 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RAI1 10743 hgsc.bcm.edu 36 17 17641438 17641438 + Missense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NF1 4763 hgsc.bcm.edu 36 17 26587108 26587108 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NF1 4763 hgsc.bcm.edu 36 17 26616416 26616416 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MYO19 80179 hgsc.bcm.edu 36 17 31940775 31940775 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KRTAP17-1 83902 hgsc.bcm.edu 36 17 36725300 36725300 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KRT37 8688 hgsc.bcm.edu 36 17 36831252 36831252 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ITGB4 3691 hgsc.bcm.edu 36 17 71257895 71257895 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 USP25 29761 hgsc.bcm.edu 36 21 16172496 16172496 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PDIA2 64714 hgsc.bcm.edu 36 16 275097 275097 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SRL 6345 hgsc.bcm.edu 36 16 4182677 4182677 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SLC38A8 146167 hgsc.bcm.edu 36 16 82624543 82624543 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TYMS 7298 hgsc.bcm.edu 36 18 660835 660835 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SLC14A1 6563 hgsc.bcm.edu 36 18 41568249 41568249 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SMAD4 4089 hgsc.bcm.edu 36 18 46857018 46857018 + Missense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZNF407 55628 hgsc.bcm.edu 36 18 70476648 70476648 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MLH1 4292 hgsc.bcm.edu 36 3 37042247 37042247 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZNF445 353274 hgsc.bcm.edu 36 3 44471784 44471784 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FYCO1 79443 hgsc.bcm.edu 36 3 45952990 45952990 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TOMM70A 9868 hgsc.bcm.edu 36 3 101587813 101587813 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KIAA2018 205717 hgsc.bcm.edu 36 3 114871714 114871714 + Missense_Mutation SNP T T G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ARHGAP31 0 hgsc.bcm.edu 36 3 120611188 120611188 + Nonsense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GTF2E1 2960 hgsc.bcm.edu 36 3 121982888 121982888 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 P2RY14 9934 hgsc.bcm.edu 36 3 152413885 152413885 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MME 4321 hgsc.bcm.edu 36 3 156342488 156342488 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PIK3CA 5290 hgsc.bcm.edu 36 3 180434661 180434661 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DVL3 1857 hgsc.bcm.edu 36 3 185366978 185366978 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ABCC9 10060 hgsc.bcm.edu 36 12 21978116 21978116 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PRPF40B 25766 hgsc.bcm.edu 36 12 48323336 48323336 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KRT1 3848 hgsc.bcm.edu 36 12 51358655 51358655 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SLC25A3 5250 hgsc.bcm.edu 36 12 97519437 97519437 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NUAK1 9891 hgsc.bcm.edu 36 12 104985081 104985081 + Missense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TCHP 84260 hgsc.bcm.edu 36 12 108829782 108829782 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CUX2 23316 hgsc.bcm.edu 36 12 110234387 110234387 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 UNC119B 84747 hgsc.bcm.edu 36 12 119639096 119639096 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NCOR2 9612 hgsc.bcm.edu 36 12 123422790 123422790 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CHRFAM7A 89832 hgsc.bcm.edu 36 15 28446971 28446971 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 EHD4 30844 hgsc.bcm.edu 36 15 39998981 39998981 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NR2E3 10002 hgsc.bcm.edu 36 15 69891203 69891203 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 XK 7504 hgsc.bcm.edu 36 X 37472050 37472050 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TEX11 56159 hgsc.bcm.edu 36 X 69743565 69743565 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MED12 9968 hgsc.bcm.edu 36 X 70274401 70274401 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DIAPH2 1730 hgsc.bcm.edu 36 X 96389487 96389487 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TCEAL8 90843 hgsc.bcm.edu 36 X 102395247 102395247 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MAP7D3 79649 hgsc.bcm.edu 36 X 135154481 135154481 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FGFR3 2261 hgsc.bcm.edu 36 4 1777697 1777697 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 HTT 6532 hgsc.bcm.edu 36 4 3178136 3178136 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 BMP2K 55589 hgsc.bcm.edu 36 4 80005744 80005744 + Missense_Mutation SNP T T A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TRAM1L1 133022 hgsc.bcm.edu 36 4 118225163 118225163 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GAB1 128869 hgsc.bcm.edu 36 4 144580892 144580892 + Silent SNP A A C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 APOB 338 hgsc.bcm.edu 36 2 21083774 21083774 + Silent SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 APOB 338 hgsc.bcm.edu 36 2 21087318 21087318 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SPTBN1 6711 hgsc.bcm.edu 36 2 54726606 54726606 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MTIF2 4528 hgsc.bcm.edu 36 2 55320753 55320753 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 BMP10 27302 hgsc.bcm.edu 36 2 68947020 68947020 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NXPH2 11249 hgsc.bcm.edu 36 2 139145338 139145338 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FIGN 55137 hgsc.bcm.edu 36 2 164175181 164175181 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SCN2A 6326 hgsc.bcm.edu 36 2 165878835 165878835 + Nonsense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GALNT3 2591 hgsc.bcm.edu 36 2 166324216 166324216 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 LRP2 4036 hgsc.bcm.edu 36 2 169730766 169730766 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TTN 7273 hgsc.bcm.edu 36 2 179165469 179165469 + Silent SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TTN 7273 hgsc.bcm.edu 36 2 179290638 179290638 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DUSP19 142679 hgsc.bcm.edu 36 2 183668509 183668509 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FN1 2335 hgsc.bcm.edu 36 2 215967574 215967574 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 EPHA4 2043 hgsc.bcm.edu 36 2 222029714 222029714 + Missense_Mutation SNP C C G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KIAA1486 57624 hgsc.bcm.edu 36 2 226155382 226155382 + Silent SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 AGAP1 116987 hgsc.bcm.edu 36 2 236482206 236482206 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KANK1 23189 hgsc.bcm.edu 36 9 700977 700977 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 JAK2 3717 hgsc.bcm.edu 36 9 5040790 5040790 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 JAK2 3717 hgsc.bcm.edu 36 9 5056787 5056787 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TRPM3 80036 hgsc.bcm.edu 36 9 72615969 72615969 + Missense_Mutation SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SVEP1 79987 hgsc.bcm.edu 36 9 112381563 112381563 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 C5 727 hgsc.bcm.edu 36 9 122816089 122816089 + Nonsense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NOTCH1 4851 hgsc.bcm.edu 36 9 138519162 138519162 + Missense_Mutation SNP T T A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FAM48A 55578 hgsc.bcm.edu 36 13 36519724 36519724 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TRPC4 7223 hgsc.bcm.edu 36 13 37218367 37218367 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RB1 5925 hgsc.bcm.edu 36 13 47937409 47937409 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ALG11 440138 hgsc.bcm.edu 36 13 51491266 51491266 + Silent SNP A A G novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DACH1 1602 hgsc.bcm.edu 36 13 70961263 70961263 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TFDP1 7027 hgsc.bcm.edu 36 13 113313317 113313317 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ALOX5 240 hgsc.bcm.edu 36 10 45198110 45198110 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DKK1 22943 hgsc.bcm.edu 36 10 53746479 53746479 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CCAR1 55749 hgsc.bcm.edu 36 10 70217783 70217783 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CHUK 1147 hgsc.bcm.edu 36 10 101968553 101968553 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PPRC1 23082 hgsc.bcm.edu 36 10 103898213 103898213 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NT5C2 22978 hgsc.bcm.edu 36 10 104889201 104889201 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ADAMTS16 170690 hgsc.bcm.edu 36 5 5288251 5288251 + Nonsense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DNAH5 1767 hgsc.bcm.edu 36 5 13806479 13806479 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RICTOR 253260 hgsc.bcm.edu 36 5 38995666 38995666 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CARD6 84674 hgsc.bcm.edu 36 5 40888455 40888455 + Missense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CD180 4064 hgsc.bcm.edu 36 5 66514647 66514647 + Nonsense_Mutation SNP C C A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KDM3B 51780 hgsc.bcm.edu 36 5 137741365 137741365 + Missense_Mutation SNP G G T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PSD2 84249 hgsc.bcm.edu 36 5 139198475 139198475 + Silent SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PCDHA12 56137 hgsc.bcm.edu 36 5 140236674 140236674 + Missense_Mutation SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 UBLCP1 134510 hgsc.bcm.edu 36 5 158637840 158637840 + Missense_Mutation SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GABRA1 2554 hgsc.bcm.edu 36 5 161232727 161232727 + Silent SNP T T C novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FAM196B 0 hgsc.bcm.edu 36 5 169242997 169242997 + Nonsense_Mutation SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 PKHD1L1 93035 hgsc.bcm.edu 36 8 110463867 110463867 + Splice_Site SNP G G A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TP53 7157 hgsc.bcm.edu 36 17 7517577 7517577 + Splice_Site SNP C C A rs11575997 unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 VGLL3 389136 hgsc.bcm.edu 36 3 87110643 87110643 + Splice_Site SNP C C T novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 TCHH 7062 hgsc.bcm.edu 36 1 150351281 150351282 + In_Frame_Ins INS - - CTC novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RCSD1 92241 hgsc.bcm.edu 36 1 165921335 165921335 + Frame_Shift_Del DEL C C - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 SLC19A3 80704 hgsc.bcm.edu 36 2 228275204 228275205 + Frame_Shift_Ins INS - - A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 FRG2C 285299 hgsc.bcm.edu 36 3 75796349 75796350 + Frame_Shift_Del DEL AG AG - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 ZNF717 100131827 hgsc.bcm.edu 36 3 75869005 75869013 + In_Frame_Del DEL CTACATTCT CTACATTCT - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 CTACATTCT CTACATTCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MUC4 4585 hgsc.bcm.edu 36 3 196994126 196994173 + In_Frame_Del DEL GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 EFHC1 114327 hgsc.bcm.edu 36 6 52442166 52442167 + Frame_Shift_Ins INS - - A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 RP1L1 94137 hgsc.bcm.edu 36 8 10505081 10505083 + In_Frame_Del DEL CTC CTC - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 CTC CTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 GPRIN2 9721 hgsc.bcm.edu 36 10 46419975 46419975 + Frame_Shift_Del DEL C C - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 CHST15 51363 hgsc.bcm.edu 36 10 125770743 125770743 + Frame_Shift_Del DEL G G - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KRT2 3849 hgsc.bcm.edu 36 12 51331904 51331905 + In_Frame_Ins INS - - CAAAGCCGCTGCCGCCTC novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 DDHD1 80821 hgsc.bcm.edu 36 14 52689230 52689231 + In_Frame_Ins INS - - GCCGCC novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 C17orf97 400566 hgsc.bcm.edu 36 17 263602 263631 + Frame_Shift_Del DEL AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 AACCCCGAGGCCCTCAAGGGCTTCCACCCT AACCCCGAGGCCCTCAAGGGCTTCCACCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 MED24 9862 hgsc.bcm.edu 36 17 35433003 35433004 + Frame_Shift_Ins INS - - A novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KRTAP4-5 85289 hgsc.bcm.edu 36 17 36559326 36559340 + In_Frame_Del DEL TGGATTCACAGCAAT TGGATTCACAGCAAT - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 TGGATTCACAGCAAT TGGATTCACAGCAAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 KIF2B 84643 hgsc.bcm.edu 36 17 49256280 49256281 + In_Frame_Ins INS - - GGCCAC novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 LTN1 0 hgsc.bcm.edu 36 21 29261077 29261077 + Frame_Shift_Del DEL T T - novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2 NEFH 4744 hgsc.bcm.edu 36 22 28215567 28215568 + In_Frame_Ins INS - - AAGTCCCCTGAGAAGGCC novel unknown TCGA-CA-6719-01A-11D-1835-10 TCGA-CA-6719-10A-01D-1835-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq d1a36e4a-d4cb-441e-966c-5870e388b2be 982bdee7-ffc9-4235-946c-17b1224b4ef2