Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
TMEM184A	202915	hgsc.bcm.edu	36	7	1553252	1553252	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EIF2AK1	27102	hgsc.bcm.edu	36	7	6052252	6052252	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GRID2IP	392862	hgsc.bcm.edu	36	7	6515452	6515452	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SNX13	23161	hgsc.bcm.edu	36	7	17821090	17821090	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SP4	6671	hgsc.bcm.edu	36	7	21436471	21436471	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IGF2BP3	10643	hgsc.bcm.edu	36	7	23357591	23357591	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SCRN1	9805	hgsc.bcm.edu	36	7	29950281	29950281	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GLI3	2737	hgsc.bcm.edu	36	7	42031490	42031490	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OGDH	4967	hgsc.bcm.edu	36	7	44687900	44687900	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ABCA13	154664	hgsc.bcm.edu	36	7	48289305	48289305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SUMF2	25870	hgsc.bcm.edu	36	7	56108255	56108255	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAGI2	9863	hgsc.bcm.edu	36	7	77723397	77723397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ACHE	43	hgsc.bcm.edu	36	7	100329547	100329547	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3CG	5294	hgsc.bcm.edu	36	7	106296715	106296715	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PRKAR2B	5577	hgsc.bcm.edu	36	7	106574068	106574068	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PNPLA8	50640	hgsc.bcm.edu	36	7	107943086	107943086	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PPP1R3A	5506	hgsc.bcm.edu	36	7	113305539	113305539	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTPRZ1	5803	hgsc.bcm.edu	36	7	121438126	121438126	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TTC26	79989	hgsc.bcm.edu	36	7	138482481	138482481	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GIMAP4	55303	hgsc.bcm.edu	36	7	149900208	149900208	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ABCB8	11194	hgsc.bcm.edu	36	7	150364168	150364168	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTPRN2	5799	hgsc.bcm.edu	36	7	157566800	157566800	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
VIPR2	7434	hgsc.bcm.edu	36	7	158528523	158528523	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZCCHC3	85364	hgsc.bcm.edu	36	20	227181	227181	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
STK35	140901	hgsc.bcm.edu	36	20	2045576	2045576	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EBF4	57593	hgsc.bcm.edu	36	20	2634893	2634893	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C20orf194	25943	hgsc.bcm.edu	36	20	3188166	3188166	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SEL1L2	80343	hgsc.bcm.edu	36	20	13794087	13794087	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KIF16B	55614	hgsc.bcm.edu	36	20	16422983	16422983	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HCK	3055	hgsc.bcm.edu	36	20	30145343	30145343	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ASXL1	171023	hgsc.bcm.edu	36	20	30486561	30486561	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDK5RAP1	51654	hgsc.bcm.edu	36	20	31448389	31448389	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PHF20	51230	hgsc.bcm.edu	36	20	33968924	33968924	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RBL1	5933	hgsc.bcm.edu	36	20	35105971	35105971	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTPRT	11122	hgsc.bcm.edu	36	20	40842305	40842305	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
STAU1	6780	hgsc.bcm.edu	36	20	47173073	47173073	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SEZ6L	23544	hgsc.bcm.edu	36	22	25077060	25077060	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EMID1	129080	hgsc.bcm.edu	36	22	27959415	27959415	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NF2	4771	hgsc.bcm.edu	36	22	28399301	28399301	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SEC14L3	266629	hgsc.bcm.edu	36	22	29188106	29188106	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ISX	91464	hgsc.bcm.edu	36	22	33811587	33811587	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HMOX1	3162	hgsc.bcm.edu	36	22	34112808	34112808	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APOL4	80832	hgsc.bcm.edu	36	22	34917794	34917794	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DMC1	283987	hgsc.bcm.edu	36	22	37264333	37264333	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TAB1	10454	hgsc.bcm.edu	36	22	38152719	38152719	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EP300	2033	hgsc.bcm.edu	36	22	39902212	39902212	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MLC1	23209	hgsc.bcm.edu	36	22	48844596	48844596	+	Silent	SNP	A	A	G	rs11568190	byFrequency	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MLC1	23209	hgsc.bcm.edu	36	22	48844618	48844618	+	Missense_Mutation	SNP	T	T	C	rs11568188	byFrequency	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TEP1	7011	hgsc.bcm.edu	36	14	19906446	19906446	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDH24	64403	hgsc.bcm.edu	36	14	22594317	22594317	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
INSM2	84684	hgsc.bcm.edu	36	14	35074765	35074765	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TRIM9	114088	hgsc.bcm.edu	36	14	50518358	50518358	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FRMD6	122786	hgsc.bcm.edu	36	14	51264264	51264264	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PELI2	57161	hgsc.bcm.edu	36	14	55833215	55833215	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ARID4A	5926	hgsc.bcm.edu	36	14	57884346	57884346	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GPHB5	122876	hgsc.bcm.edu	36	14	62854158	62854158	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZFYVE26	23503	hgsc.bcm.edu	36	14	67334190	67334190	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
YLPM1	56252	hgsc.bcm.edu	36	14	74349213	74349213	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C14orf118	55668	hgsc.bcm.edu	36	14	75708027	75708027	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADCK1	57143	hgsc.bcm.edu	36	14	77395221	77395221	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TSHR	7253	hgsc.bcm.edu	36	14	80679162	80679162	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TRIP11	9321	hgsc.bcm.edu	36	14	91540487	91540487	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EML1	2009	hgsc.bcm.edu	36	14	99434379	99434379	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KDM4B	23030	hgsc.bcm.edu	36	19	5095411	5095411	+	Silent	SNP	T	T	C	rs10408767	by2Hit2Allele;byCluster	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
VAV1	7409	hgsc.bcm.edu	36	19	6771770	6771770	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MUC16	94025	hgsc.bcm.edu	36	19	8848224	8848224	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MUC16	94025	hgsc.bcm.edu	36	19	8864588	8864588	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
COL5A3	50509	hgsc.bcm.edu	36	19	9948908	9948908	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF763	284390	hgsc.bcm.edu	36	19	11950901	11950901	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NANOS3	342977	hgsc.bcm.edu	36	19	13849181	13849181	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BST2	684	hgsc.bcm.edu	36	19	17377375	17377375	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
UNC13A	23025	hgsc.bcm.edu	36	19	17581822	17581822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FKBP8	23770	hgsc.bcm.edu	36	19	18510132	18510132	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF208	7757	hgsc.bcm.edu	36	19	21947536	21947536	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C19orf2	8725	hgsc.bcm.edu	36	19	35190225	35190225	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MLL4	9757	hgsc.bcm.edu	36	19	40903890	40903890	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PSENEN	55851	hgsc.bcm.edu	36	19	40929549	40929549	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF565	147929	hgsc.bcm.edu	36	19	41365854	41365854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF540	163255	hgsc.bcm.edu	36	19	42794821	42794821	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KCNK6	9424	hgsc.bcm.edu	36	19	43509738	43509738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF546	339327	hgsc.bcm.edu	36	19	45212311	45212311	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FUT2	2524	hgsc.bcm.edu	36	19	53898274	53898274	+	Silent	SNP	C	C	T	rs681343	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FGF21	26291	hgsc.bcm.edu	36	19	53953175	53953175	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PRMT1	3276	hgsc.bcm.edu	36	19	54879104	54879104	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF613	79898	hgsc.bcm.edu	36	19	57140702	57140702	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CACNG7	59284	hgsc.bcm.edu	36	19	59137143	59137143	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LILRA2	11027	hgsc.bcm.edu	36	19	59778192	59778192	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NLRP2	55655	hgsc.bcm.edu	36	19	60204039	60204039	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SGK223	0	hgsc.bcm.edu	36	8	8213461	8213461	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PINX1	54984	hgsc.bcm.edu	36	8	10729693	10729693	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SGCZ	137868	hgsc.bcm.edu	36	8	13992458	13992458	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
XPO7	23039	hgsc.bcm.edu	36	8	21896148	21896148	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
UNC5D	137970	hgsc.bcm.edu	36	8	35663632	35663632	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZFHX4	79776	hgsc.bcm.edu	36	8	77928940	77928940	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HEY1	23462	hgsc.bcm.edu	36	8	80840177	80840177	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EXT1	2131	hgsc.bcm.edu	36	8	118894311	118894311	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HAS2	3037	hgsc.bcm.edu	36	8	122710201	122710201	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
COL22A1	169044	hgsc.bcm.edu	36	8	139772290	139772290	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF707	286075	hgsc.bcm.edu	36	8	144848097	144848097	+	Silent	SNP	A	A	G	rs11786757	byCluster	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KIFC2	90990	hgsc.bcm.edu	36	8	145663460	145663460	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RECQL4	9401	hgsc.bcm.edu	36	8	145709576	145709576	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PRDM2	7799	hgsc.bcm.edu	36	1	13979571	13979571	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ALDH4A1	8659	hgsc.bcm.edu	36	1	19075504	19075504	+	Silent	SNP	T	T	C	rs7550938	byCluster;byFrequency	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ALDH4A1	8659	hgsc.bcm.edu	36	1	19075513	19075513	+	Silent	SNP	T	T	C	rs2230706	byCluster;byFrequency	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ECE1	1889	hgsc.bcm.edu	36	1	21444134	21444134	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TCEB3	6924	hgsc.bcm.edu	36	1	23950099	23950099	+	Silent	SNP	C	C	T	rs34390860	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SRRM1	10250	hgsc.bcm.edu	36	1	24850623	24850623	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CSMD2	114784	hgsc.bcm.edu	36	1	33809721	33809721	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
THRAP3	9967	hgsc.bcm.edu	36	1	36530792	36530792	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C1orf50	79078	hgsc.bcm.edu	36	1	43013005	43013005	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTPRF	5792	hgsc.bcm.edu	36	1	43858402	43858402	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KLF17	128209	hgsc.bcm.edu	36	1	44368254	44368254	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ERI3	79033	hgsc.bcm.edu	36	1	44577346	44577346	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAST2	23139	hgsc.bcm.edu	36	1	46067763	46067763	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ACADM	34	hgsc.bcm.edu	36	1	75973071	75973071	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GBP2	2634	hgsc.bcm.edu	36	1	89358540	89358540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LRRC8C	84230	hgsc.bcm.edu	36	1	89952955	89952955	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LPPR4	9890	hgsc.bcm.edu	36	1	99502810	99502810	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LPPR4	9890	hgsc.bcm.edu	36	1	99539931	99539931	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CELSR2	1952	hgsc.bcm.edu	36	1	109595697	109595697	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HAO2	51179	hgsc.bcm.edu	36	1	119737937	119737937	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ITGA10	8515	hgsc.bcm.edu	36	1	144253258	144253258	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GJA8	2703	hgsc.bcm.edu	36	1	145847078	145847078	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HIST2H3D	653604	hgsc.bcm.edu	36	1	148051836	148051836	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GOLPH3L	55204	hgsc.bcm.edu	36	1	148900986	148900986	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PSMB4	5692	hgsc.bcm.edu	36	1	149639207	149639207	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SHE	126669	hgsc.bcm.edu	36	1	152740757	152740757	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MUC1	4582	hgsc.bcm.edu	36	1	153426341	153426341	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PKLR	5313	hgsc.bcm.edu	36	1	153532109	153532109	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NHLH1	4807	hgsc.bcm.edu	36	1	158607168	158607168	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PAPPA2	60676	hgsc.bcm.edu	36	1	174792712	174792712	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RGSL1	353299	hgsc.bcm.edu	36	1	180709584	180709584	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LAMC2	3918	hgsc.bcm.edu	36	1	181479122	181479122	+	Silent	SNP	A	A	G	rs41314547	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TPR	7175	hgsc.bcm.edu	36	1	184569058	184569058	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CFHR2	3080	hgsc.bcm.edu	36	1	195185356	195185356	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DDX59	83479	hgsc.bcm.edu	36	1	198902261	198902261	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KIF21B	23046	hgsc.bcm.edu	36	1	199225770	199225770	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C1orf116	79098	hgsc.bcm.edu	36	1	205263024	205263024	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TRAF5	7188	hgsc.bcm.edu	36	1	209599931	209599931	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RYR2	6262	hgsc.bcm.edu	36	1	235726661	235726661	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RYR2	6262	hgsc.bcm.edu	36	1	236013746	236013746	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MRPL23	6150	hgsc.bcm.edu	36	11	1928739	1928739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MICAL2	9645	hgsc.bcm.edu	36	11	12202892	12202892	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTH	5741	hgsc.bcm.edu	36	11	13470546	13470546	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SOX6	55553	hgsc.bcm.edu	36	11	16296733	16296733	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAPK8IP1	9479	hgsc.bcm.edu	36	11	45882248	45882248	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR4A15	81328	hgsc.bcm.edu	36	11	54892056	54892056	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR5D14	219436	hgsc.bcm.edu	36	11	55319814	55319814	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SPRYD5	84767	hgsc.bcm.edu	36	11	55412162	55412162	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SSRP1	6749	hgsc.bcm.edu	36	11	56851819	56851819	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR5B2	390190	hgsc.bcm.edu	36	11	57947077	57947077	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDC42BPG	55561	hgsc.bcm.edu	36	11	64358548	64358548	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FRMD8	83786	hgsc.bcm.edu	36	11	64918139	64918139	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RELA	5970	hgsc.bcm.edu	36	11	65184218	65184218	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KLC2	147700	hgsc.bcm.edu	36	11	65790984	65790984	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GAB2	9846	hgsc.bcm.edu	36	11	77608095	77608095	+	Silent	SNP	G	G	A	rs61749244	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GAB2	9846	hgsc.bcm.edu	36	11	77610855	77610855	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ATM	472	hgsc.bcm.edu	36	11	107622995	107622995	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ARHGAP20	57569	hgsc.bcm.edu	36	11	109957000	109957000	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BTG4	54766	hgsc.bcm.edu	36	11	110873978	110873978	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CBL	867	hgsc.bcm.edu	36	11	118654118	118654118	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CBL	867	hgsc.bcm.edu	36	11	118675523	118675523	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TECTA	7007	hgsc.bcm.edu	36	11	120536217	120536217	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C11orf63	79864	hgsc.bcm.edu	36	11	122335311	122335311	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DSP	1834	hgsc.bcm.edu	36	6	7526030	7526030	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HIVEP1	3096	hgsc.bcm.edu	36	6	12232945	12232945	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FKSG83	83954	hgsc.bcm.edu	36	6	27401569	27401569	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PGBD1	84547	hgsc.bcm.edu	36	6	28377944	28377944	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BAG6	7917	hgsc.bcm.edu	36	6	31718142	31718142	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SKIV2L	6499	hgsc.bcm.edu	36	6	32042555	32042555	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NOTCH4	4855	hgsc.bcm.edu	36	6	32296287	32296287	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZBTB22	9278	hgsc.bcm.edu	36	6	33392523	33392523	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DAXX	1616	hgsc.bcm.edu	36	6	33396615	33396615	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BRPF3	27154	hgsc.bcm.edu	36	6	36293673	36293673	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TRERF1	55809	hgsc.bcm.edu	36	6	42339057	42339057	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ABCC10	89845	hgsc.bcm.edu	36	6	43523456	43523456	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PHF3	23469	hgsc.bcm.edu	36	6	64447912	64447912	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KCNQ5	56479	hgsc.bcm.edu	36	6	73961339	73961339	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PHIP	55023	hgsc.bcm.edu	36	6	79711819	79711819	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAP3K7	6885	hgsc.bcm.edu	36	6	91335048	91335048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SIM1	6492	hgsc.bcm.edu	36	6	100948292	100948292	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDK19	0	hgsc.bcm.edu	36	6	111098373	111098373	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TNFAIP3	7128	hgsc.bcm.edu	36	6	138238896	138238896	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TXLNB	167838	hgsc.bcm.edu	36	6	139605605	139605605	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAS1	4142	hgsc.bcm.edu	36	6	160248493	160248493	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC22A3	6581	hgsc.bcm.edu	36	6	160792074	160792074	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAP3K4	4216	hgsc.bcm.edu	36	6	161439371	161439371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR3A1	4994	hgsc.bcm.edu	36	17	3142553	3142553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SPAG7	9552	hgsc.bcm.edu	36	17	4804842	4804842	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KCTD11	147040	hgsc.bcm.edu	36	17	7197085	7197085	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZBTB4	57659	hgsc.bcm.edu	36	17	7307109	7307109	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TP53	7157	hgsc.bcm.edu	36	17	7519145	7519145	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ALOX12B	242	hgsc.bcm.edu	36	17	7920229	7920229	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYH4	4622	hgsc.bcm.edu	36	17	10291142	10291142	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NF1	4763	hgsc.bcm.edu	36	17	26708154	26708154	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GPR179	440435	hgsc.bcm.edu	36	17	33737957	33737957	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TOP2A	7153	hgsc.bcm.edu	36	17	35822562	35822562	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRT28	162605	hgsc.bcm.edu	36	17	36203674	36203674	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRTAP4-7	100132476	hgsc.bcm.edu	36	17	36494330	36494330	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRT13	3860	hgsc.bcm.edu	36	17	36911045	36911045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
AOC2	314	hgsc.bcm.edu	36	17	38255165	38255165	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DHX8	1659	hgsc.bcm.edu	36	17	38925628	38925628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDC27	996	hgsc.bcm.edu	36	17	42569635	42569635	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ITGB3	3690	hgsc.bcm.edu	36	17	42723327	42723327	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYCBPAP	84073	hgsc.bcm.edu	36	17	45950911	45950911	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYCBPAP	84073	hgsc.bcm.edu	36	17	45951057	45951057	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TEX14	56155	hgsc.bcm.edu	36	17	54031921	54031921	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TEX14	56155	hgsc.bcm.edu	36	17	54034789	54034789	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TUBD1	51174	hgsc.bcm.edu	36	17	55313211	55313211	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BCAS3	54828	hgsc.bcm.edu	36	17	56447964	56447964	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EVPL	2125	hgsc.bcm.edu	36	17	71517089	71517089	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DNAH17	8632	hgsc.bcm.edu	36	17	73957197	73957197	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMPRSS15	0	hgsc.bcm.edu	36	21	18564183	18564183	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HUNK	30811	hgsc.bcm.edu	36	21	32253053	32253053	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC5A3	6526	hgsc.bcm.edu	36	21	34390649	34390649	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ERG	2078	hgsc.bcm.edu	36	21	38677707	38677707	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SH3BGR	6451	hgsc.bcm.edu	36	21	39768995	39768995	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BACE2	25825	hgsc.bcm.edu	36	21	41544648	41544648	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRTAP10-10	353333	hgsc.bcm.edu	36	21	44881850	44881850	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MCM3AP	8888	hgsc.bcm.edu	36	21	46479757	46479757	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DNASE1	1773	hgsc.bcm.edu	36	16	3647077	3647077	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GRIN2A	2903	hgsc.bcm.edu	36	16	9842062	9842062	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CIITA	4261	hgsc.bcm.edu	36	16	10908851	10908851	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DOC2A	8448	hgsc.bcm.edu	36	16	29928851	29928851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDH1	51343	hgsc.bcm.edu	36	16	67413485	67413485	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDH1	51343	hgsc.bcm.edu	36	16	67413606	67413606	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
WDR59	79726	hgsc.bcm.edu	36	16	73477795	73477795	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ANKRD29	147463	hgsc.bcm.edu	36	18	19468108	19468108	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DSG4	147409	hgsc.bcm.edu	36	18	27237485	27237485	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SMAD4	4089	hgsc.bcm.edu	36	18	46829150	46829150	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SMAD4	4089	hgsc.bcm.edu	36	18	46858767	46858767	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SERPINB12	89777	hgsc.bcm.edu	36	18	59384887	59384887	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SETD5	55209	hgsc.bcm.edu	36	3	9492605	9492605	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CAMK1	8536	hgsc.bcm.edu	36	3	9778327	9778327	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
VHL	7428	hgsc.bcm.edu	36	3	10166478	10166478	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FBLN2	2199	hgsc.bcm.edu	36	3	13588028	13588028	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LSM3	27258	hgsc.bcm.edu	36	3	14214607	14214607	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
COLQ	8292	hgsc.bcm.edu	36	3	15504772	15504772	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KCNH8	131096	hgsc.bcm.edu	36	3	19297778	19297778	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF385D	79750	hgsc.bcm.edu	36	3	21437822	21437822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MLH1	4292	hgsc.bcm.edu	36	3	37025327	37025327	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MLH1	4292	hgsc.bcm.edu	36	3	37028594	37028594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
XIRP1	165904	hgsc.bcm.edu	36	3	39204940	39204940	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TGM4	7047	hgsc.bcm.edu	36	3	44927870	44927870	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SETD2	29072	hgsc.bcm.edu	36	3	47138182	47138182	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CELSR3	1951	hgsc.bcm.edu	36	3	48671849	48671849	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
VPRBP	9730	hgsc.bcm.edu	36	3	51432411	51432411	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PARP3	10039	hgsc.bcm.edu	36	3	51956863	51956863	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FRMD4B	23150	hgsc.bcm.edu	36	3	69350184	69350184	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR5K2	402135	hgsc.bcm.edu	36	3	99699650	99699650	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TOMM70A	9868	hgsc.bcm.edu	36	3	101587813	101587813	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RG9MTD1	54931	hgsc.bcm.edu	36	3	102767101	102767101	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CASR	846	hgsc.bcm.edu	36	3	123485524	123485524	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADCY5	111	hgsc.bcm.edu	36	3	124488299	124488299	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADCY5	111	hgsc.bcm.edu	36	3	124491422	124491422	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYLK	4638	hgsc.bcm.edu	36	3	124909399	124909399	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ATR	390502	hgsc.bcm.edu	36	3	143742510	143742510	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLITRK3	22865	hgsc.bcm.edu	36	3	166388817	166388817	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GHSR	2693	hgsc.bcm.edu	36	3	173648151	173648151	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3CA	5290	hgsc.bcm.edu	36	3	180418776	180418776	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3CA	5290	hgsc.bcm.edu	36	3	180430520	180430520	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3CA	5290	hgsc.bcm.edu	36	3	180434605	180434605	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3CA	5290	hgsc.bcm.edu	36	3	180434755	180434755	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3CA	5290	hgsc.bcm.edu	36	3	180434825	180434825	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HRG	3273	hgsc.bcm.edu	36	3	187878161	187878161	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RFC4	5984	hgsc.bcm.edu	36	3	188005152	188005152	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ATN1	1822	hgsc.bcm.edu	36	12	6916155	6916155	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LDHB	3945	hgsc.bcm.edu	36	12	21688178	21688178	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ABCC9	10060	hgsc.bcm.edu	36	12	21978114	21978114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IFLTD1	160492	hgsc.bcm.edu	36	12	25590734	25590734	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ITPR2	3709	hgsc.bcm.edu	36	12	26483501	26483501	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
STK38L	23012	hgsc.bcm.edu	36	12	27362216	27362216	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RAPGEF3	10411	hgsc.bcm.edu	36	12	46417642	46417642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAM186B	84070	hgsc.bcm.edu	36	12	48283332	48283332	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAM186A	121006	hgsc.bcm.edu	36	12	49031944	49031944	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAM186A	121006	hgsc.bcm.edu	36	12	49031970	49031970	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAM186A	121006	hgsc.bcm.edu	36	12	49032153	49032153	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRT81	3887	hgsc.bcm.edu	36	12	50971463	50971463	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRT72	140807	hgsc.bcm.edu	36	12	51267859	51267859	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRT79	338785	hgsc.bcm.edu	36	12	51513998	51513998	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RARG	5916	hgsc.bcm.edu	36	12	51907578	51907578	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IKZF4	64375	hgsc.bcm.edu	36	12	54714799	54714799	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HELB	92797	hgsc.bcm.edu	36	12	64990194	64990194	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZFC3H1	196441	hgsc.bcm.edu	36	12	70322511	70322511	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MGAT4C	25834	hgsc.bcm.edu	36	12	84897952	84897952	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MRPL42	28977	hgsc.bcm.edu	36	12	92405487	92405487	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ELK3	2004	hgsc.bcm.edu	36	12	95164926	95164926	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NT5DC3	51559	hgsc.bcm.edu	36	12	102695827	102695827	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HIP1R	9026	hgsc.bcm.edu	36	12	121906806	121906806	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMEM132D	121256	hgsc.bcm.edu	36	12	128132388	128132388	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EP400	57634	hgsc.bcm.edu	36	12	131076210	131076210	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
EP400	57634	hgsc.bcm.edu	36	12	131113091	131113091	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C15orf2	23742	hgsc.bcm.edu	36	15	22472555	22472555	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ATP10A	57194	hgsc.bcm.edu	36	15	23487957	23487957	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HERC2	8924	hgsc.bcm.edu	36	15	26184664	26184664	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NDUFAF1	51103	hgsc.bcm.edu	36	15	39474436	39474436	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GLCE	26035	hgsc.bcm.edu	36	15	67348202	67348202	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PEAK1	0	hgsc.bcm.edu	36	15	75259493	75259493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADAMTS7	11173	hgsc.bcm.edu	36	15	76845234	76845234	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82279788	82279788	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ANPEP	290	hgsc.bcm.edu	36	15	88150689	88150689	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LASS3	204219	hgsc.bcm.edu	36	15	98830674	98830674	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SHROOM2	357	hgsc.bcm.edu	36	X	9865321	9865321	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RS1	6248	hgsc.bcm.edu	36	X	18572497	18572497	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PHKA2	5256	hgsc.bcm.edu	36	X	18825237	18825237	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTCHD1	139411	hgsc.bcm.edu	36	X	23320694	23320694	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTCHD1	139411	hgsc.bcm.edu	36	X	23321293	23321293	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DMD	1756	hgsc.bcm.edu	36	X	31407089	31407089	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF674	641339	hgsc.bcm.edu	36	X	46244272	46244272	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC9A7	84679	hgsc.bcm.edu	36	X	46351438	46351438	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC9A7	84679	hgsc.bcm.edu	36	X	46406497	46406497	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF182	7988	hgsc.bcm.edu	36	X	47721659	47721659	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
AKAP4	8852	hgsc.bcm.edu	36	X	49844946	49844946	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IL2RG	3561	hgsc.bcm.edu	36	X	70245895	70245895	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TGIF2LX	90316	hgsc.bcm.edu	36	X	89064095	89064095	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SYTL4	94121	hgsc.bcm.edu	36	X	99827664	99827664	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NOX1	27035	hgsc.bcm.edu	36	X	100004415	100004415	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TEX13A	56157	hgsc.bcm.edu	36	X	104350850	104350850	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LRCH2	57631	hgsc.bcm.edu	36	X	114374709	114374709	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ODZ1	10178	hgsc.bcm.edu	36	X	123345668	123345668	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
F9	2158	hgsc.bcm.edu	36	X	138471479	138471479	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PASD1	139135	hgsc.bcm.edu	36	X	150583318	150583318	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ARHGAP4	393	hgsc.bcm.edu	36	X	152828483	152828483	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PLXNA3	55558	hgsc.bcm.edu	36	X	153347958	153347958	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BRCC3	79184	hgsc.bcm.edu	36	X	154001541	154001541	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CRIPAK	285464	hgsc.bcm.edu	36	4	1378324	1378324	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NCAPG	64151	hgsc.bcm.edu	36	4	17428000	17428000	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PPARGC1A	10891	hgsc.bcm.edu	36	4	23435187	23435187	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PCDH7	5099	hgsc.bcm.edu	36	4	30334536	30334536	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GABRA4	2557	hgsc.bcm.edu	36	4	46625116	46625116	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PDGFRA	5156	hgsc.bcm.edu	36	4	54825843	54825843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KIT	3815	hgsc.bcm.edu	36	4	55288969	55288969	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PPAT	80347	hgsc.bcm.edu	36	4	56996383	56996383	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CENPC1	1060	hgsc.bcm.edu	36	4	68040528	68040528	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMPRSS11D	9407	hgsc.bcm.edu	36	4	68407935	68407935	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC4A4	8671	hgsc.bcm.edu	36	4	72630961	72630961	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NPFFR2	10886	hgsc.bcm.edu	36	4	73231882	73231882	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PPEF2	5470	hgsc.bcm.edu	36	4	77016655	77016655	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HERC6	55008	hgsc.bcm.edu	36	4	89523488	89523488	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RG9MTD2	93587	hgsc.bcm.edu	36	4	100698371	100698371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SYNPO2	171024	hgsc.bcm.edu	36	4	120177762	120177762	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAT4	79633	hgsc.bcm.edu	36	4	126631136	126631136	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PCDH10	57575	hgsc.bcm.edu	36	4	134291948	134291948	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CLGN	4312	hgsc.bcm.edu	36	4	141541110	141541110	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MMAA	387254	hgsc.bcm.edu	36	4	146794601	146794601	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FBXW7	55294	hgsc.bcm.edu	36	4	153464853	153464853	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FBXW7	55294	hgsc.bcm.edu	36	4	153471357	153471357	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ARFIP1	27236	hgsc.bcm.edu	36	4	154028823	154028823	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GALNTL6	442117	hgsc.bcm.edu	36	4	173967243	173967243	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MTNR1A	4543	hgsc.bcm.edu	36	4	187692304	187692304	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DNMT3A	1788	hgsc.bcm.edu	36	2	25323032	25323032	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IFT172	26160	hgsc.bcm.edu	36	2	27553632	27553632	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GCKR	11183	hgsc.bcm.edu	36	2	27583622	27583622	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CLIP4	79745	hgsc.bcm.edu	36	2	29220191	29220191	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BIRC6	57448	hgsc.bcm.edu	36	2	32507812	32507812	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SOCS5	9655	hgsc.bcm.edu	36	2	46839538	46839538	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MSH2	4436	hgsc.bcm.edu	36	2	47490975	47490975	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MSH2	4436	hgsc.bcm.edu	36	2	47557065	47557065	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SPTBN1	6711	hgsc.bcm.edu	36	2	54740610	54740610	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CLEC4F	165530	hgsc.bcm.edu	36	2	70897330	70897330	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CCDC142	84865	hgsc.bcm.edu	36	2	74562812	74562812	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SEMA4F	10505	hgsc.bcm.edu	36	2	74760479	74760479	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
AFF3	3899	hgsc.bcm.edu	36	2	99548470	99548470	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZC3H6	376940	hgsc.bcm.edu	36	2	112790618	112790618	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DPP10	57628	hgsc.bcm.edu	36	2	116163926	116163926	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GYPC	2995	hgsc.bcm.edu	36	2	127167992	127167992	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LRP1B	53353	hgsc.bcm.edu	36	2	140809711	140809711	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LRP1B	53353	hgsc.bcm.edu	36	2	140961753	140961753	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LRP1B	53353	hgsc.bcm.edu	36	2	141190074	141190074	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LRP1B	53353	hgsc.bcm.edu	36	2	141358015	141358015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC4A10	57282	hgsc.bcm.edu	36	2	162521994	162521994	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SCN3A	6328	hgsc.bcm.edu	36	2	165655605	165655605	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SCN3A	6328	hgsc.bcm.edu	36	2	165660403	165660403	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CSRNP3	80034	hgsc.bcm.edu	36	2	166243833	166243833	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
XIRP2	129446	hgsc.bcm.edu	36	2	167811898	167811898	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HAT1	8520	hgsc.bcm.edu	36	2	172530633	172530633	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PDE11A	50940	hgsc.bcm.edu	36	2	178202429	178202429	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TTN	7273	hgsc.bcm.edu	36	2	179105687	179105687	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TTN	7273	hgsc.bcm.edu	36	2	179190801	179190801	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
COL5A2	1290	hgsc.bcm.edu	36	2	189612490	189612490	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SATB2	23314	hgsc.bcm.edu	36	2	199901826	199901826	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FZD7	8324	hgsc.bcm.edu	36	2	202608783	202608783	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IDH1	3417	hgsc.bcm.edu	36	2	208821362	208821362	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIKFYVE	200576	hgsc.bcm.edu	36	2	208926972	208926972	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYL1	4632	hgsc.bcm.edu	36	2	210867218	210867218	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CPS1	1589	hgsc.bcm.edu	36	2	211229544	211229544	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FN1	2335	hgsc.bcm.edu	36	2	215934544	215934544	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RPL37A	6168	hgsc.bcm.edu	36	2	217072951	217072951	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
STK36	27148	hgsc.bcm.edu	36	2	219266914	219266914	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
COL6A3	1293	hgsc.bcm.edu	36	2	237952212	237952212	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SMARCA2	6595	hgsc.bcm.edu	36	9	2029793	2029793	+	Missense_Mutation	SNP	A	A	C	rs62534884	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BNC2	54796	hgsc.bcm.edu	36	9	16409326	16409326	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MLLT3	4300	hgsc.bcm.edu	36	9	20404310	20404310	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C9orf11	54586	hgsc.bcm.edu	36	9	27284379	27284379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MOBKL2B	79817	hgsc.bcm.edu	36	9	27445163	27445163	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CA9	768	hgsc.bcm.edu	36	9	35666374	35666374	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ROR2	6095	hgsc.bcm.edu	36	9	93533047	93533047	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PHF2	5253	hgsc.bcm.edu	36	9	95478813	95478813	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GALNT12	79695	hgsc.bcm.edu	36	9	100625445	100625445	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SMC2	10592	hgsc.bcm.edu	36	9	105929560	105929560	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC44A1	23446	hgsc.bcm.edu	36	9	107137790	107137790	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CTNNAL1	8727	hgsc.bcm.edu	36	9	110779090	110779090	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
COL27A1	85301	hgsc.bcm.edu	36	9	115971463	115971463	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CEP110	11064	hgsc.bcm.edu	36	9	122917284	122917284	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SPTAN1	6709	hgsc.bcm.edu	36	9	130393621	130393621	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NOTCH1	4851	hgsc.bcm.edu	36	9	138510656	138510656	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NOTCH1	4851	hgsc.bcm.edu	36	9	138519346	138519346	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TRAF2	10010	hgsc.bcm.edu	36	9	138934631	138934631	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
C9orf169	375791	hgsc.bcm.edu	36	9	139239949	139239949	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
XPO4	64328	hgsc.bcm.edu	36	13	20293947	20293947	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LECT1	11061	hgsc.bcm.edu	36	13	52175821	52175821	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYCBP2	23077	hgsc.bcm.edu	36	13	76638567	76638567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLITRK5	26050	hgsc.bcm.edu	36	13	87127447	87127447	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GPC5	2262	hgsc.bcm.edu	36	13	91143889	91143889	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IPO5	3843	hgsc.bcm.edu	36	13	97450846	97450846	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMTC4	84899	hgsc.bcm.edu	36	13	100062696	100062696	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NALCN	259232	hgsc.bcm.edu	36	13	100508293	100508293	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MYO16	23026	hgsc.bcm.edu	36	13	108273610	108273610	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DIP2C	22982	hgsc.bcm.edu	36	10	458812	458812	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ITIH5	80760	hgsc.bcm.edu	36	10	7658507	7658507	+	Silent	SNP	A	A	G	rs2275068	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HSPA14	51182	hgsc.bcm.edu	36	10	14949746	14949746	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ITGA8	8516	hgsc.bcm.edu	36	10	15640162	15640162	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PLXDC2	84898	hgsc.bcm.edu	36	10	20472312	20472312	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAPK8	5599	hgsc.bcm.edu	36	10	49298266	49298266	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PRKG1	5592	hgsc.bcm.edu	36	10	53720033	53720033	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CCDC6	8030	hgsc.bcm.edu	36	10	61244452	61244452	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RHOBTB1	9886	hgsc.bcm.edu	36	10	62302030	62302030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
JMJD1C	221037	hgsc.bcm.edu	36	10	64637905	64637905	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CTNNA3	29119	hgsc.bcm.edu	36	10	68649372	68649372	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADK	132	hgsc.bcm.edu	36	10	76099971	76099971	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZMIZ1	57178	hgsc.bcm.edu	36	10	80728328	80728328	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
BMPR1A	657	hgsc.bcm.edu	36	10	88673227	88673227	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTEN	5728	hgsc.bcm.edu	36	10	89643791	89643791	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PTEN	5728	hgsc.bcm.edu	36	10	89710658	89710658	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3AP1	118788	hgsc.bcm.edu	36	10	98401282	98401282	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PDCD11	22984	hgsc.bcm.edu	36	10	105193033	105193033	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CASP7	840	hgsc.bcm.edu	36	10	115479250	115479250	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FGFR2	2263	hgsc.bcm.edu	36	10	123315088	123315088	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ECHS1	1892	hgsc.bcm.edu	36	10	135034228	135034228	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CDH10	1008	hgsc.bcm.edu	36	5	24629198	24629198	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RXFP3	51289	hgsc.bcm.edu	36	5	33973277	33973277	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MGC42105	167359	hgsc.bcm.edu	36	5	43281778	43281778	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GZMA	3001	hgsc.bcm.edu	36	5	54439842	54439842	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GPBP1	65056	hgsc.bcm.edu	36	5	56594248	56594248	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAST4	375449	hgsc.bcm.edu	36	5	66386055	66386055	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PIK3R1	5295	hgsc.bcm.edu	36	5	67612194	67612194	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZCCHC9	84240	hgsc.bcm.edu	36	5	80644195	80644195	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RGMB	285704	hgsc.bcm.edu	36	5	98157308	98157308	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APC	324	hgsc.bcm.edu	36	5	112190790	112190790	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APC	324	hgsc.bcm.edu	36	5	112201481	112201481	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APC	324	hgsc.bcm.edu	36	5	112202014	112202014	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APC	324	hgsc.bcm.edu	36	5	112203047	112203047	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APC	324	hgsc.bcm.edu	36	5	112203365	112203365	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CHSY3	337876	hgsc.bcm.edu	36	5	129548619	129548619	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SEPT8	23176	hgsc.bcm.edu	36	5	132125421	132125421	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FBXL21	26223	hgsc.bcm.edu	36	5	135304248	135304248	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAM53C	51307	hgsc.bcm.edu	36	5	137710460	137710460	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PCDHA3	56145	hgsc.bcm.edu	36	5	140162409	140162409	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SLC36A3	285641	hgsc.bcm.edu	36	5	150637296	150637296	+	Nonsense_Mutation	SNP	C	C	A	rs13155272	byHapMap	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GRIA1	2890	hgsc.bcm.edu	36	5	153058647	153058647	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LARP1	23367	hgsc.bcm.edu	36	5	154154930	154154930	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TIMD4	91937	hgsc.bcm.edu	36	5	156285901	156285901	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RNF145	153830	hgsc.bcm.edu	36	5	158563218	158563218	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DOCK2	1794	hgsc.bcm.edu	36	5	169162647	169162647	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KCNMB1	3779	hgsc.bcm.edu	36	5	169738507	169738507	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
HRH2	3274	hgsc.bcm.edu	36	5	175043248	175043248	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DOK3	79930	hgsc.bcm.edu	36	5	176862780	176862780	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RUFY1	80230	hgsc.bcm.edu	36	5	178945449	178945449	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MAPK9	5601	hgsc.bcm.edu	36	5	179640065	179640065	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
LAMB4	22798	hgsc.bcm.edu	36	7	107535311	107535311	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NUP133	55746	hgsc.bcm.edu	36	1	227689834	227689834	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ALDH1A2	8854	hgsc.bcm.edu	36	15	56043561	56043561	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
THAP9	79725	hgsc.bcm.edu	36	4	84046806	84046806	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OVGP1	5016	hgsc.bcm.edu	36	1	111759041	111759064	+	In_Frame_Del	DEL	CACAGGGGTCACAGACTGATGACC	CACAGGGGTCACAGACTGATGACC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CACAGGGGTCACAGACTGATGACC	CACAGGGGTCACAGACTGATGACC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TUFT1	7286	hgsc.bcm.edu	36	1	149808798	149808807	+	Frame_Shift_Del	DEL	GACGGTGCAG	GACGGTGCAG	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	GACGGTGCAG	GACGGTGCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ADCY10	55811	hgsc.bcm.edu	36	1	166092224	166092236	+	Frame_Shift_Del	DEL	CTCCATAAATCTC	CTCCATAAATCTC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CTCCATAAATCTC	CTCCATAAATCTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZBTB41	360023	hgsc.bcm.edu	36	1	195416805	195416806	+	Frame_Shift_Del	INS	-	-	TA	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR2T35	403244	hgsc.bcm.edu	36	1	246868225	246868226	+	Frame_Shift_Del	INS	-	-	CA	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PLEKHH2	130271	hgsc.bcm.edu	36	2	43846206	43846208	+	In_Frame_Del	DEL	AGC	AGC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	AGC	AGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ASTL	431705	hgsc.bcm.edu	36	2	96153330	96153330	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMEM37	140738	hgsc.bcm.edu	36	2	119911121	119911122	+	In_Frame_Ins	INS	-	-	GTGTGC	rs3217464	byCluster	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PRKRA	8575	hgsc.bcm.edu	36	2	179023981	179023982	+	Frame_Shift_Del	DEL	GC	GC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	GC	GC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
IFT122	55764	hgsc.bcm.edu	36	3	130668589	130668591	+	In_Frame_Del	DEL	GAC	GAC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	GAC	GAC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CRIPAK	285464	hgsc.bcm.edu	36	4	1378375	1378376	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FRAS1	80144	hgsc.bcm.edu	36	4	79473499	79473500	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
APC	324	hgsc.bcm.edu	36	5	112203850	112203851	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RNF145	153830	hgsc.bcm.edu	36	5	158563208	158563208	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TNXB	7148	hgsc.bcm.edu	36	6	32119238	32119238	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KCP	375616	hgsc.bcm.edu	36	7	128311340	128311341	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SGK223	0	hgsc.bcm.edu	36	8	8272278	8272279	+	In_Frame_Ins	INS	-	-	GCCGCT	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FOXD4L5	653427	hgsc.bcm.edu	36	9	69466589	69466589	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CALHM3	119395	hgsc.bcm.edu	36	10	105223164	105223165	+	In_Frame_Ins	INS	-	-	GGGGGCTCAGGCACTGCG	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CHST15	51363	hgsc.bcm.edu	36	10	125770743	125770743	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
RIC8A	60626	hgsc.bcm.edu	36	11	199895	199897	+	In_Frame_Del	DEL	CCC	CCC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CCC	CCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
MUC2	4583	hgsc.bcm.edu	36	11	1082799	1082800	+	Frame_Shift_Ins	INS	-	-	GC	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
KRTAP5-2	440021	hgsc.bcm.edu	36	11	1575749	1575778	+	In_Frame_Del	DEL	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
OR51I2	390064	hgsc.bcm.edu	36	11	5432217	5432217	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CASP5	838	hgsc.bcm.edu	36	11	104383251	104383251	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
FAM186A	121006	hgsc.bcm.edu	36	12	49032180	49032215	+	In_Frame_Del	DEL	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMBIM4	51643	hgsc.bcm.edu	36	12	64818204	64818204	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
TMEM97	27346	hgsc.bcm.edu	36	17	23677934	23677934	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SOX9	6662	hgsc.bcm.edu	36	17	67629310	67629311	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF516	9658	hgsc.bcm.edu	36	18	72219946	72219946	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
PLIN4	0	hgsc.bcm.edu	36	19	4463893	4463896	+	Frame_Shift_Del	DEL	TTGG	TTGG	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	TTGG	TTGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NANOS3	342977	hgsc.bcm.edu	36	19	13849181	13849182	+	In_Frame_Ins	INS	-	-	GGAGCCGGTGTCAGCGCC	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF233	353355	hgsc.bcm.edu	36	19	49470637	49470637	+	Frame_Shift_Del	DEL	T	T	-	rs59660444	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
ZNF772	400720	hgsc.bcm.edu	36	19	62680478	62680479	+	In_Frame_Ins	INS	-	-	GCC	rs34678661	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
DEFB126	81623	hgsc.bcm.edu	36	20	74311	74312	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
NINL	22981	hgsc.bcm.edu	36	20	25405050	25405055	+	In_Frame_Del	DEL	CTCCCA	CTCCCA	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CTCCCA	CTCCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
CRELD2	79174	hgsc.bcm.edu	36	22	48701940	48701977	+	Frame_Shift_Del	DEL	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
VCX3A	51481	hgsc.bcm.edu	36	X	6461813	6461842	+	In_Frame_Del	DEL	GCTCTCCTGACTCAGTGGTTCCTCCACCTG	GCTCTCCTGACTCAGTGGTTCCTCCACCTG	-	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	GCTCTCCTGACTCAGTGGTTCCTCCACCTG	GCTCTCCTGACTCAGTGGTTCCTCCACCTG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1
SPANXN3	139067	hgsc.bcm.edu	36	X	142432814	142432815	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AY-6386-01A-21D-1719-10	TCGA-AY-6386-10A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	236e3f1e-4693-42b7-a1b2-3c0790ae825c	7944e55d-8ff4-483a-8b39-32c308d560b1