Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target LGI1 9211 hgsc.bcm.edu 36 10 95542591 95542592 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - C - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005097 exon6 c.605_606insC p.G202fs . . . ARHGAP19 84986 hgsc.bcm.edu 36 10 98978900 98978901 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - C - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032900 exon11 c.1468_1469insG p.K490fs . . . HPS1 3257 hgsc.bcm.edu 36 10 100180989 100180989 + Missense_Mutation SNP G G A rs1801286 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182639 exon7 c.C557T p.A186V . . . DNMBP 23268 hgsc.bcm.edu 36 10 101638634 101638634 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015221 exon12 c.C3223A p.R1075R . . . DNMBP 23268 hgsc.bcm.edu 36 10 101658820 101658820 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015221 exon5 c.G2334A p.E778E . . . PPRC1 23082 hgsc.bcm.edu 36 10 103891591 103891591 + Missense_Mutation SNP G G C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015062 exon5 c.G3336C p.K1112N . . . GBF1 8729 hgsc.bcm.edu 36 10 104109123 104109123 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001199378 exon11 c.A1121G p.H374R . . . TMEM180 79847 hgsc.bcm.edu 36 10 104223382 104223382 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024789 exon8 c.G991A p.V331I . . . SORCS3 22986 hgsc.bcm.edu 36 10 106897388 106897388 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014978 exon9 c.C1326T p.D442D . . . MXI1 4601 hgsc.bcm.edu 36 10 112029779 112029779 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_130439 exon5 c.C670T p.R224X . . . CASP7 840 hgsc.bcm.edu 36 10 115475239 115475239 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033339 exon6 c.G505A p.D169N . . . PDZD8 118987 hgsc.bcm.edu 36 10 119034144 119034144 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173791 exon5 c.G2090T p.R697I . . . C10orf84 63877 hgsc.bcm.edu 36 10 120085716 120085716 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001134672 exon2 c.T202C p.C68R . . . TIAL1 7073 hgsc.bcm.edu 36 10 121328306 121328306 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001033925 exon7 c.G529A p.G177S . . . TACC2 10579 hgsc.bcm.edu 36 10 123893099 123893099 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_206862 exon7 c.G5722A p.A1908T . . . C10orf120 399814 hgsc.bcm.edu 36 10 124447750 124447750 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001010912 exon3 c.A497G p.K166R . . . C10orf137 26098 hgsc.bcm.edu 36 10 127404297 127404297 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015608 exon6 c.C692T p.S231L . . . TUBGCP2 10844 hgsc.bcm.edu 36 10 134948632 134948632 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006659 exon13 c.C1971T p.S657S . . . CYP2E1 1571 hgsc.bcm.edu 36 10 135195117 135195117 + Missense_Mutation SNP C C T rs60719153 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000773 exon3 c.C376T p.R126W . . . NEBL 10529 hgsc.bcm.edu 36 10 21187179 21187179 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006393 exon9 c.G899A p.S300N . . . ARHGAP21 57584 hgsc.bcm.edu 36 10 24948497 24948497 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020824 exon9 c.G2333T p.R778L . . . ARMC4 55130 hgsc.bcm.edu 36 10 28269737 28269737 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018076 exon13 c.G1747A p.A583T . . . ARMC4 55130 hgsc.bcm.edu 36 10 28273316 28273316 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018076 exon12 c.A1584G p.R528R . . . ZEB1 6935 hgsc.bcm.edu 36 10 31843622 31843622 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001174093 exon5 c.A710G p.E237G . . . ZEB1 6935 hgsc.bcm.edu 36 10 31855828 31855828 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001174093 exon8 c.G2945T p.G982V . . . ARHGAP12 94134 hgsc.bcm.edu 36 10 32141682 32141682 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018287 exon15 c.G1910A p.R637H . . . ARHGAP12 94134 hgsc.bcm.edu 36 10 32172474 32172474 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018287 exon7 c.G1217A p.S406N . . . PARD3 56288 hgsc.bcm.edu 36 10 34440360 34440360 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001184787 exon24 c.G3703T p.G1235X . . . ZNF25 219749 hgsc.bcm.edu 36 10 38282038 38282038 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145011 exon6 c.G394A p.A132T . . . ERCC6 2074 hgsc.bcm.edu 36 10 50336899 50336899 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000124 exon21 c.G4450A p.G1484R . . . PCDH15 65217 hgsc.bcm.edu 36 10 55252621 55252621 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001142767 exon31 c.C4751A p.P1584Q . . . FBXO18 84893 hgsc.bcm.edu 36 10 5999457 5999457 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032807 exon12 c.G2010A p.A670A . . . ANK3 288 hgsc.bcm.edu 36 10 61500956 61500956 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020987 exon37 c.G9689A p.R3230H . . . ANK3 288 hgsc.bcm.edu 36 10 61629956 61629956 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020987 exon13 c.C1428T p.S476S . . . SIRT1 23411 hgsc.bcm.edu 36 10 69339130 69339130 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001142498 exon6 c.T397C p.Y133H . . . SLC25A16 8034 hgsc.bcm.edu 36 10 69918353 69918353 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152707 exon7 c.G650A p.G217E . . . TET1 80312 hgsc.bcm.edu 36 10 70120816 70120816 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_030625 exon12 c.C5650T p.P1884S . . . CCAR1 55749 hgsc.bcm.edu 36 10 70176980 70176980 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018237 exon7 c.A575G p.Y192C . . . HKDC1 80201 hgsc.bcm.edu 36 10 70691005 70691005 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025130 exon16 c.G2321A p.R774H . . . NODAL 4838 hgsc.bcm.edu 36 10 71865556 71865556 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018055 exon2 c.G383A p.C128Y . . . SLC29A3 55315 hgsc.bcm.edu 36 10 72791842 72791842 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018344 exon6 c.C899A p.P300H . . . CCDC109A 90550 hgsc.bcm.edu 36 10 74301310 74301310 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138357 exon6 c.T827C p.M276T . . . TSPAN14 81619 hgsc.bcm.edu 36 10 82259165 82259165 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_030927 exon5 c.C408T p.D136D . . . BMPR1A 657 hgsc.bcm.edu 36 10 88673337 88673337 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004329 exon13 c.C1480T p.R494X . . . TNKS2 80351 hgsc.bcm.edu 36 10 93612707 93612707 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025235 exon27 c.A3472G p.M1158V . . . SORBS1 10580 hgsc.bcm.edu 36 10 97164437 97164437 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001034954 exon7 c.C614A p.P205Q . . . TLL2 7093 hgsc.bcm.edu 36 10 98119919 98119919 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012465 exon20 c.C2806A p.R936R . . . CWF19L2 143884 hgsc.bcm.edu 36 11 106729522 106729523 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152434 exon13 c.2023_2024insA p.C675fs . . . CTSF 8722 hgsc.bcm.edu 36 11 66091681 66091682 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003793 exon3 c.341_342insC p.L114fs . . . ANGPTL5 253935 hgsc.bcm.edu 36 11 101283772 101283772 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178127 exon2 c.T79G p.C27G . . . KIAA1377 57562 hgsc.bcm.edu 36 11 101324003 101324003 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020802 exon4 c.G426T p.E142D . . . KBTBD3 143879 hgsc.bcm.edu 36 11 105430115 105430115 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152433 exon3 c.G511A p.D171N . . . EXPH5 23086 hgsc.bcm.edu 36 11 107885589 107885589 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015065 exon6 c.C5855T p.P1952L . . . SIK2 23235 hgsc.bcm.edu 36 11 111081039 111081039 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015191 exon8 c.G1067A p.R356Q . . . HTR3A 3359 hgsc.bcm.edu 36 11 113361960 113361960 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000869 exon6 c.C576T p.N192N . . . C2CD2L 9854 hgsc.bcm.edu 36 11 118486850 118486850 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014807 exon4 c.G654A p.T218T . . . TECTA 7007 hgsc.bcm.edu 36 11 120513732 120513732 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005422 exon10 c.G3334T p.D1112Y . . . UBASH3B 84959 hgsc.bcm.edu 36 11 122155489 122155489 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032873 exon4 c.G477A p.S159S . . . CRTAM 56253 hgsc.bcm.edu 36 11 122244012 122244012 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019604 exon9 c.G1046A p.G349D . . . OR10S1 219873 hgsc.bcm.edu 36 11 123353456 123353456 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001004474 exon1 c.T153C p.T51T . . . PANX3 116337 hgsc.bcm.edu 36 11 123992398 123992398 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052959 exon3 c.C343T p.L115L . . . ESAM 90952 hgsc.bcm.edu 36 11 124129413 124129413 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138961 exon6 c.T764A p.V255E . . . SLC37A2 219855 hgsc.bcm.edu 36 11 124457000 124457000 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145290 exon9 c.G873T p.A291A . . . TOLLIP 54472 hgsc.bcm.edu 36 11 1263829 1263829 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019009 exon5 c.G589A p.V197I . . . RICS 9743 hgsc.bcm.edu 36 11 128373524 128373524 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014715 exon2 c.G6A p.K2K . . . BARX2 8538 hgsc.bcm.edu 36 11 128826391 128826391 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003658 exon4 c.G724A p.E242K . . . PRDM10 56980 hgsc.bcm.edu 36 11 129287195 129287195 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020228 exon19 c.G2989A p.A997T . . . NTM 50863 hgsc.bcm.edu 36 11 131521480 131521480 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001144058 exon2 c.G262A p.V88M . . . PDE3B 5140 hgsc.bcm.edu 36 11 14764693 14764693 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000922 exon3 c.T1164C p.G388G . . . E2F8 79733 hgsc.bcm.edu 36 11 19213086 19213086 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024680 exon5 c.C547T p.R183X . . . SLC6A5 9152 hgsc.bcm.edu 36 11 20615410 20615410 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004211 exon12 c.T1854A p.F618L . . . NELL1 4745 hgsc.bcm.edu 36 11 20656104 20656104 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006157 exon2 c.C106A p.L36I . . . NELL1 4745 hgsc.bcm.edu 36 11 21512549 21512549 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006157 exon16 c.G1699A p.V567I . . . PAX6 5080 hgsc.bcm.edu 36 11 31779828 31779828 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001127612 exon6 c.G214A p.G72S . . . TRIM44 54765 hgsc.bcm.edu 36 11 35713553 35713553 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017583 exon4 c.G991A p.D331N . . . STIM1 6786 hgsc.bcm.edu 36 11 4064329 4064329 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003156 exon11 c.G1521T p.Q507H . . . ACCS 84680 hgsc.bcm.edu 36 11 44061596 44061596 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032592 exon14 c.G1301A p.R434H . . . SYT13 57586 hgsc.bcm.edu 36 11 45232404 45232404 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020826 exon3 c.C537T p.R179R . . . F2 2147 hgsc.bcm.edu 36 11 46701387 46701387 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000506 exon5 c.G398T p.R133M . . . LRP4 4038 hgsc.bcm.edu 36 11 46853059 46853059 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002334 exon28 c.G4097A p.R1366H . . . LRP4 4038 hgsc.bcm.edu 36 11 46857267 46857267 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002334 exon21 c.G2990A p.R997H . . . ACP2 53 hgsc.bcm.edu 36 11 47223669 47223669 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001610 exon5 c.C481T p.R161C . . . NR1H3 10062 hgsc.bcm.edu 36 11 47239684 47239684 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130102 exon5 c.T584C p.M195T . . . NUP160 23279 hgsc.bcm.edu 36 11 47797548 47797548 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015231 exon10 c.C1316A p.P439H . . . SLC43A1 8501 hgsc.bcm.edu 36 11 57015389 57015389 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003627 exon11 c.C1077T p.F359F . . . OR10Q1 219960 hgsc.bcm.edu 36 11 57752137 57752137 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001004471 exon1 c.G787A p.V263M . . . OR5B12 390191 hgsc.bcm.edu 36 11 57963522 57963522 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001004733 exon1 c.C679T p.R227C . . . CNTF 1270 hgsc.bcm.edu 36 11 58148448 58148448 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000614 exon2 c.G480A p.K160K . . . MS4A6A 64231 hgsc.bcm.edu 36 11 59705651 59705651 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152851 exon2 c.C126T p.H42H . . . MS4A14 84689 hgsc.bcm.edu 36 11 59927031 59927031 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032597 exon4 c.T389C p.L130P . . . FAM160A2 84067 hgsc.bcm.edu 36 11 6201989 6201989 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032127 exon3 c.T204C p.A68A . . . APBB1 322 hgsc.bcm.edu 36 11 6379227 6379227 + Silent SNP G G C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001164 exon10 c.C1512G p.A504A . . . SLC22A11 55867 hgsc.bcm.edu 36 11 64093837 64093837 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018484 exon9 c.T1520C p.V507A . . . ZFPL1 7542 hgsc.bcm.edu 36 11 64608835 64608835 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006782 exon2 c.C89A p.A30D . . . SPDYC 387778 hgsc.bcm.edu 36 11 64696754 64696754 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001008778 exon6 c.C540A p.H180Q . . . MAP3K11 4296 hgsc.bcm.edu 36 11 65122553 65122553 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002419 exon10 c.G2329T p.D777Y . . . MUS81 80198 hgsc.bcm.edu 36 11 65388585 65388585 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025128 exon11 c.G1101T p.L367L . . . PELI3 246330 hgsc.bcm.edu 36 11 65995410 65995410 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145065 exon4 c.G346A p.V116I . . . DPP3 10072 hgsc.bcm.edu 36 11 66012024 66012024 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005700 exon6 c.G637A p.E213K . . . ZDHHC24 254359 hgsc.bcm.edu 36 11 66067810 66067810 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207340 exon2 c.C500T p.A167V . . . CCDC87 55231 hgsc.bcm.edu 36 11 66115260 66115260 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018219 exon1 c.C1803A p.L601L . . . CCS 9973 hgsc.bcm.edu 36 11 66129782 66129782 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005125 exon8 c.C705T p.G235G . . . SPTBN2 6712 hgsc.bcm.edu 36 11 66213977 66213977 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006946 exon28 c.G5824A p.A1942T . . . ALDH3B2 222 hgsc.bcm.edu 36 11 67187752 67187752 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000695 exon9 c.C930T p.G310G . . . CPT1A 1374 hgsc.bcm.edu 36 11 68297347 68297347 + Missense_Mutation SNP C C T rs1046804 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001031847 exon14 c.G1702A p.A568T . . . TPCN2 219931 hgsc.bcm.edu 36 11 68602971 68602971 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139075 exon16 c.G1446T p.L482F . . . ARAP1 116985 hgsc.bcm.edu 36 11 72086709 72086709 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001040118 exon19 c.C2632T p.R878W . . . ARHGEF17 9828 hgsc.bcm.edu 36 11 72749791 72749791 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014786 exon12 c.A4431C p.K1477N . . . SERPINH1 871 hgsc.bcm.edu 36 11 74960535 74960535 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001235 exon5 c.G1016A p.R339H . . . RSF1 51773 hgsc.bcm.edu 36 11 77056131 77056131 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016578 exon16 c.C3805T p.R1269W . . . NLRP10 338322 hgsc.bcm.edu 36 11 7938229 7938229 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_176821 exon2 c.G1506T p.K502N . . . CCDC81 60494 hgsc.bcm.edu 36 11 85801082 85801082 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021827 exon10 c.C954A p.S318S . . . ST5 6764 hgsc.bcm.edu 36 11 8696009 8696009 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005418 exon8 c.T1484C p.L495P . . . ZNF143 7702 hgsc.bcm.edu 36 11 9494388 9494388 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003442 exon14 c.G1589T p.G530V . . . SBF2 81846 hgsc.bcm.edu 36 11 9823847 9823847 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_030962 exon24 c.T2951C p.F984S . . . RIC8A 60626 hgsc.bcm.edu 36 11 204305 204306 + Frame_Shift_Del DEL TA TA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TA TA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021932 exon10 c.1569_1570del p.523_524del . . . OR5B21 219968 hgsc.bcm.edu 36 11 58031850 58031852 + In_Frame_Del DEL AAG AAG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AAG AAG AAG - AAG AAG Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001005218 exon1 c.303_305del p.101_102del . . . SART1 9092 hgsc.bcm.edu 36 11 65501648 65501649 + Frame_Shift_Del DEL AA AA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AA AA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005146 exon16 c.1984_1985del p.662_662del . . . TPCN2 219931 hgsc.bcm.edu 36 11 68602966 68602968 + In_Frame_Del DEL CTG CTG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CTG CTG . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139075 exon16 c.1441_1443del p.481_481del . . . SLC5A8 160728 hgsc.bcm.edu 36 12 100127458 100127458 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145913 exon1 c.G300A p.A100A . . . NT5DC3 51559 hgsc.bcm.edu 36 12 102716543 102716543 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001031701 exon5 c.C567T p.Y189Y . . . CKAP4 10970 hgsc.bcm.edu 36 12 105157030 105157030 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006825 exon2 c.G1711A p.E571K . . . TCP11L2 255394 hgsc.bcm.edu 36 12 105232374 105232374 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152772 exon3 c.T266C p.L89S . . . RIC8B 55188 hgsc.bcm.edu 36 12 105733040 105733040 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018157 exon3 c.C569T p.P190L . . . BTBD11 121551 hgsc.bcm.edu 36 12 106528136 106528136 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001017523 exon3 c.G294T p.A98A . . . CSDA 8531 hgsc.bcm.edu 36 12 10745897 10745897 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145426 exon7 c.G775T p.G259X . . . TMEM119 338773 hgsc.bcm.edu 36 12 107510015 107510015 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181724 exon2 c.C274T p.R92C . . . ACACB 32 hgsc.bcm.edu 36 12 108090146 108090146 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001093 exon3 c.C849A p.A283A . . . PPTC7 160760 hgsc.bcm.edu 36 12 109473981 109473981 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139283 exon2 c.G399A p.L133L . . . ALDH2 217 hgsc.bcm.edu 36 12 110712660 110712660 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000690 exon6 c.C592T p.P198S . . . RBM19 9904 hgsc.bcm.edu 36 12 112880110 112880110 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016196 exon6 c.G700A p.V234M . . . TBX3 6926 hgsc.bcm.edu 36 12 113596827 113596827 + Silent SNP C C T rs62640916 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005996 exon6 c.G1236A p.S412S . . . HNF1A 6927 hgsc.bcm.edu 36 12 119916497 119916497 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000545 exon4 c.C861T p.S287S . . . HPD 3242 hgsc.bcm.edu 36 12 120772003 120772003 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002150 exon8 c.C491T p.A164V . . . CLIP1 6249 hgsc.bcm.edu 36 12 121383640 121383640 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198240 exon13 c.T2576C p.M859T . . . LRP6 4040 hgsc.bcm.edu 36 12 12288621 12288621 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002336 exon2 c.C291T p.P97P . . . SLC15A4 121260 hgsc.bcm.edu 36 12 127865435 127865435 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145648 exon2 c.C680T p.A227V . . . RIMBP2 23504 hgsc.bcm.edu 36 12 129529460 129529460 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015347 exon3 c.G52A p.A18T . . . POLE 5426 hgsc.bcm.edu 36 12 131719138 131719138 + Missense_Mutation SNP C C T rs58916399 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006231 exon45 c.G6166A p.A2056T . . . GUCY2C 2984 hgsc.bcm.edu 36 12 14727384 14727384 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004963 exon4 c.T470C p.L157S . . . WBP11 51729 hgsc.bcm.edu 36 12 14838826 14838826 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016312 exon7 c.C633T p.V211V . . . DCP1B 196513 hgsc.bcm.edu 36 12 1931926 1931926 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152640 exon7 c.G1441T p.A481S . . . SLCO1B3 28234 hgsc.bcm.edu 36 12 20945657 20945657 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019844 exon14 c.C1854T p.S618S . . . KLHDC5 57542 hgsc.bcm.edu 36 12 27842061 27842061 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020782 exon3 c.C1213T p.P405S . . . TMTC1 83857 hgsc.bcm.edu 36 12 29560580 29560580 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001193451 exon15 c.C2276T p.A759V . . . TEAD4 7004 hgsc.bcm.edu 36 12 3001271 3001271 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003213 exon10 c.T724C p.Y242H . . . DNM1L 10059 hgsc.bcm.edu 36 12 32775306 32775306 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012062 exon10 c.G1171A p.D391N . . . PKP2 5318 hgsc.bcm.edu 36 12 32922522 32922522 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004572 exon3 c.G559A p.A187T . . . LRRK2 120892 hgsc.bcm.edu 36 12 38954780 38954780 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198578 exon15 c.G1785A p.M595I . . . CNTN1 1272 hgsc.bcm.edu 36 12 39624226 39624226 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_175038 exon13 c.A1637C p.Q546P . . . C12orf4 57102 hgsc.bcm.edu 36 12 4497537 4497537 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020374 exon8 c.C981T p.G327G . . . NDUFA9 4704 hgsc.bcm.edu 36 12 4664742 4664742 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005002 exon10 c.A953G p.K318R . . . LASS5 91012 hgsc.bcm.edu 36 12 48815885 48815885 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_147190 exon8 c.G769A p.A257T . . . DIP2B 57609 hgsc.bcm.edu 36 12 49377221 49377221 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173602 exon17 c.C2044T p.R682C . . . ANKRD33 341405 hgsc.bcm.edu 36 12 50569524 50569524 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130015 exon4 c.C223T p.R75W . . . ACVR1B 91 hgsc.bcm.edu 36 12 50666951 50666951 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020327 exon7 c.G1063A p.G355R . . . NR4A1 3164 hgsc.bcm.edu 36 12 50736190 50736190 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002135 exon4 c.C986T p.A329V . . . KRT75 9119 hgsc.bcm.edu 36 12 51114055 51114055 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004693 exon1 c.G301T p.G101W . . . KRT76 51350 hgsc.bcm.edu 36 12 51451124 51451124 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015848 exon7 c.G1410A p.E470E . . . RARG 5916 hgsc.bcm.edu 36 12 51894268 51894268 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000966 exon7 c.C655T p.R219C . . . GPR84 53831 hgsc.bcm.edu 36 12 53043820 53043820 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020370 exon2 c.T83G p.V28G . . . ATP5B 506 hgsc.bcm.edu 36 12 55323576 55323576 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001686 exon5 c.G670A p.A224T . . . MARS 4141 hgsc.bcm.edu 36 12 56192924 56192924 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004990 exon15 c.C1877A p.P626H . . . B4GALNT1 2583 hgsc.bcm.edu 36 12 56308227 56308227 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001478 exon9 c.C1088T p.A363V . . . AGAP2 116986 hgsc.bcm.edu 36 12 56411664 56411664 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014770 exon9 c.G974A p.R325Q . . . AVIL 10677 hgsc.bcm.edu 36 12 56483697 56483697 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006576 exon14 c.C1694T p.A565V . . . DPY19L2 283417 hgsc.bcm.edu 36 12 62260832 62260832 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173812 exon19 c.A1777G p.I593V . . . WIF1 11197 hgsc.bcm.edu 36 12 63735254 63735254 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007191 exon9 c.G929A p.C310Y . . . HELB 92797 hgsc.bcm.edu 36 12 64982722 64982722 + Missense_Mutation SNP G G C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033647 exon1 c.G72C p.E24D . . . GNB3 2784 hgsc.bcm.edu 36 12 6823360 6823360 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002075 exon9 c.G656A p.R219H . . . TRHDE 29953 hgsc.bcm.edu 36 12 71301221 71301221 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013381 exon14 c.G2401T p.G801X . . . CLEC4A 50856 hgsc.bcm.edu 36 12 8182082 8182082 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_194450 exon5 c.G547A p.G183S . . . LRRIQ1 84125 hgsc.bcm.edu 36 12 83965279 83965279 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032165 exon6 c.G578T p.R193M . . . CLEC6A 93978 hgsc.bcm.edu 36 12 8499989 8499989 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001007033 exon1 c.G15A p.Q5Q . . . FAM113B 91523 hgsc.bcm.edu 36 12 45916004 45916005 + Frame_Shift_Del DEL CA CA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CA CA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138371 exon2 c.891_892del p.297_298del . . . DNAJC14 85406 hgsc.bcm.edu 36 12 54507327 54507329 + In_Frame_Del DEL CTT CTT - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CTT CTT . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032364 exon2 c.1381_1383del p.461_461del . . . C13orf16 121793 hgsc.bcm.edu 36 13 110778535 110778535 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152324 exon3 c.T63C p.C21C . . . ATP11A 23250 hgsc.bcm.edu 36 13 112544638 112544638 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015205 exon17 c.C1753T p.R585X . . . RXFP2 122042 hgsc.bcm.edu 36 13 31233913 31233913 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001166058 exon3 c.C294T p.N98N . . . FREM2 341640 hgsc.bcm.edu 36 13 38330170 38330170 + Silent SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207361 exon13 c.A7215C p.T2405T . . . FREM2 341640 hgsc.bcm.edu 36 13 38351005 38351005 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207361 exon23 c.G8897T p.G2966V . . . C13orf23 80209 hgsc.bcm.edu 36 13 38485764 38485764 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_170719 exon10 c.C1559T p.P520L . . . NARG1L 79612 hgsc.bcm.edu 36 13 40792869 40792869 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024561 exon4 c.G311A p.R104Q . . . ZC3H13 23091 hgsc.bcm.edu 36 13 45475303 45475303 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015070 exon8 c.C916T p.R306X . . . RCBTB2 1102 hgsc.bcm.edu 36 13 47982817 47982817 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001268 exon10 c.G875A p.G292D . . . CYSLTR2 57105 hgsc.bcm.edu 36 13 48179361 48179361 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020377 exon1 c.G407A p.R136H . . . MYCBP2 23077 hgsc.bcm.edu 36 13 76648755 76648755 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015057 exon36 c.G5350A p.A1784T . . . POU4F1 5457 hgsc.bcm.edu 36 13 78073576 78073576 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006237 exon2 c.G1235A p.R412Q . . . GPC6 10082 hgsc.bcm.edu 36 13 93736704 93736704 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005708 exon5 c.G978A p.M326I . . . DCT 1638 hgsc.bcm.edu 36 13 93910367 93910367 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001922 exon6 c.C1158T p.A386A . . . IPO5 3843 hgsc.bcm.edu 36 13 97453255 97453255 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002271 exon16 c.A1514G p.K505R . . . RNF113B 140432 hgsc.bcm.edu 36 13 97626902 97626902 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178861 exon1 c.A590T p.K197M . . . CDC42BPB 9578 hgsc.bcm.edu 36 14 102516976 102516977 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006035 exon8 c.1027_1028insT p.E343_G344delinsX . . . TEP1 7011 hgsc.bcm.edu 36 14 19922486 19922487 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - C - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007110 exon23 c.3243_3244insG p.G1081fs . . . DYNC1H1 1778 hgsc.bcm.edu 36 14 101523614 101523614 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001376 exon9 c.C2610T p.D870D . . . CDC42BPB 9578 hgsc.bcm.edu 36 14 102544620 102544620 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006035 exon3 c.C293T p.T98I . . . CCNB1IP1 57820 hgsc.bcm.edu 36 14 19854283 19854283 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182849 exon4 c.G240A p.L80L . . . NDRG2 57447 hgsc.bcm.edu 36 14 20560422 20560422 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016250 exon4 c.G150A p.A50A . . . SUPT16H 11198 hgsc.bcm.edu 36 14 20897584 20897584 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007192 exon19 c.C2200T p.R734W . . . SALL2 6297 hgsc.bcm.edu 36 14 21060859 21060859 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005407 exon2 c.G2843A p.G948D . . . ADCY4 196883 hgsc.bcm.edu 36 14 23868479 23868479 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001198592 exon10 c.G1318T p.G440W . . . NFATC4 4776 hgsc.bcm.edu 36 14 23911572 23911572 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001136022 exon4 c.C1471A p.H491N . . . AKAP6 9472 hgsc.bcm.edu 36 14 32360666 32360666 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004274 exon13 c.A3896C p.D1299A . . . SRP54 6729 hgsc.bcm.edu 36 14 34561902 34561902 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003136 exon14 c.A1192G p.K398E . . . FANCM 57697 hgsc.bcm.edu 36 14 44698156 44698156 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020937 exon9 c.A1504T p.I502F . . . FRMD6 122786 hgsc.bcm.edu 36 14 51241313 51241313 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152330 exon6 c.A444G p.A148A . . . RHOJ 57381 hgsc.bcm.edu 36 14 62805632 62805632 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020663 exon2 c.C230T p.A77V . . . PPP2R5E 5529 hgsc.bcm.edu 36 14 62918611 62918611 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006246 exon13 c.T1220C p.V407A . . . MAP3K9 4293 hgsc.bcm.edu 36 14 70269458 70269458 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033141 exon12 c.G2423A p.R808Q . . . PCNX 22990 hgsc.bcm.edu 36 14 70584278 70584278 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014982 exon22 c.T4162A p.L1388I . . . SIPA1L1 26037 hgsc.bcm.edu 36 14 71124846 71124846 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015556 exon2 c.C504T p.R168R . . . C14orf43 91748 hgsc.bcm.edu 36 14 73275463 73275463 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001043318 exon2 c.G1002A p.A334A . . . C14orf115 55237 hgsc.bcm.edu 36 14 73893719 73893719 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018228 exon2 c.C480T p.D160D . . . NEK9 91754 hgsc.bcm.edu 36 14 74631860 74631860 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033116 exon18 c.G2201A p.R734H . . . ISM2 145501 hgsc.bcm.edu 36 14 77014744 77014744 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182509 exon4 c.G695A p.S232N . . . SNW1 22938 hgsc.bcm.edu 36 14 77287522 77287522 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012245 exon3 c.G223A p.D75N . . . ADCK1 57143 hgsc.bcm.edu 36 14 77355145 77355145 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001142545 exon2 c.A71G p.Y24C . . . NRXN3 9369 hgsc.bcm.edu 36 14 79397889 79397889 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138970 exon6 c.C1128T p.Y376Y . . . GTF2A1 2957 hgsc.bcm.edu 36 14 80740171 80740171 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015859 exon3 c.G163A p.A55T . . . C14orf102 55051 hgsc.bcm.edu 36 14 89852739 89852739 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017970 exon3 c.G343A p.D115N . . . CPSF2 53981 hgsc.bcm.edu 36 14 91679206 91679206 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017437 exon9 c.C955T p.R319C . . . KIAA1409 57578 hgsc.bcm.edu 36 14 93114068 93114068 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020818 exon18 c.G1808A p.G603E . . . SERPINA12 145264 hgsc.bcm.edu 36 14 94034435 94034435 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173850 exon3 c.A53G p.K18R . . . PAPOLA 10914 hgsc.bcm.edu 36 14 96092471 96092471 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032632 exon19 c.G1972A p.E658K . . . SAMD4A 23034 hgsc.bcm.edu 36 14 54273542 54273545 + Frame_Shift_Del DEL ACCC ACCC - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 ACCC ACCC . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015589 exon3 c.763_766del p.255_256del . . . ARG2 384 hgsc.bcm.edu 36 14 67178820 67178822 + In_Frame_Del DEL GGA GGA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 GGA GGA GGA - GGA GGA Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001172 exon3 c.349_351del p.117_117del . . . LINS1 55180 hgsc.bcm.edu 36 15 98927378 98927379 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001040616 exon7 c.1862_1863insC p.R621fs . . . C15orf2 23742 hgsc.bcm.edu 36 15 22474609 22474609 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018958 exon1 c.C2502T p.V834V . . . ATP10A 57194 hgsc.bcm.edu 36 15 23517911 23517911 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024490 exon7 c.C1349A p.S450Y . . . GABRB3 2562 hgsc.bcm.edu 36 15 24376629 24376629 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021912 exon6 c.A612G p.E204E . . . MTMR15 22909 hgsc.bcm.edu 36 15 29016713 29016713 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014967 exon14 c.G3016A p.V1006M . . . TMEM85 51234 hgsc.bcm.edu 36 15 32307999 32307999 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016454 exon4 c.G433A p.A145T . . . LPCAT4 254531 hgsc.bcm.edu 36 15 32443192 32443192 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_153613 exon6 c.C673T p.P225S . . . INO80 54617 hgsc.bcm.edu 36 15 39153871 39153871 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017553 exon10 c.A1316G p.Q439R . . . EXD1 161829 hgsc.bcm.edu 36 15 39263930 39263930 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152596 exon10 c.G1036T p.G346W . . . RPAP1 26015 hgsc.bcm.edu 36 15 39615003 39615003 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015540 exon5 c.G540A p.E180E . . . TYRO3 7301 hgsc.bcm.edu 36 15 39652569 39652569 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006293 exon16 c.C1953T p.F651F . . . CAPN3 825 hgsc.bcm.edu 36 15 40488841 40488841 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_212465 exon20 c.C1684T p.R562W . . . ZFP106 64397 hgsc.bcm.edu 36 15 40530148 40530148 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022473 exon2 c.A1545G p.K515K . . . EPB42 2038 hgsc.bcm.edu 36 15 41281460 41281460 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001114134 exon12 c.A1787C p.E596A . . . EPB42 2038 hgsc.bcm.edu 36 15 41288772 41288772 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001114134 exon6 c.C824T p.A275V . . . DUOX2 50506 hgsc.bcm.edu 36 15 43179260 43179260 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014080 exon25 c.C3307T p.R1103C . . . SHF 90525 hgsc.bcm.edu 36 15 43257768 43257768 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138356 exon3 c.C332T p.P111L . . . SLC24A5 283652 hgsc.bcm.edu 36 15 46201379 46201379 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_205850 exon2 c.C155T p.S52L . . . AP4E1 23431 hgsc.bcm.edu 36 15 49082051 49082051 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007347 exon21 c.G3314A p.R1105Q . . . TNFAIP8L3 388121 hgsc.bcm.edu 36 15 49137782 49137782 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207381 exon3 c.C467T p.T156I . . . ALDH1A2 8854 hgsc.bcm.edu 36 15 56145061 56145061 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003888 exon1 c.C80T p.P27L . . . RORA 6095 hgsc.bcm.edu 36 15 58706786 58706786 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_134260 exon1 c.G80A p.R27Q . . . APH1B 83464 hgsc.bcm.edu 36 15 61365875 61365875 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031301 exon3 c.C350T p.A117V . . . CA12 771 hgsc.bcm.edu 36 15 61419615 61419615 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001218 exon7 c.C672A p.S224S . . . ZNF609 23060 hgsc.bcm.edu 36 15 62759990 62759990 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015042 exon7 c.G4038T p.G1346G . . . PKM2 5315 hgsc.bcm.edu 36 15 70296894 70296894 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002654 exon3 c.C156T p.G52G . . . SEMA7A 8482 hgsc.bcm.edu 36 15 72491024 72491024 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003612 exon12 c.C1503T p.H501H . . . SEMA7A 8482 hgsc.bcm.edu 36 15 72494288 72494288 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003612 exon9 c.C1039T p.R347C . . . UBL7 84993 hgsc.bcm.edu 36 15 72529388 72529388 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_201265 exon7 c.G606A p.M202I . . . CLK3 1198 hgsc.bcm.edu 36 15 72706991 72706991 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130028 exon9 c.C1415T p.A472V . . . CYP1A2 1544 hgsc.bcm.edu 36 15 72830635 72830635 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000761 exon3 c.C884T p.P295L . . . CIB2 10518 hgsc.bcm.edu 36 15 76185231 76185231 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006383 exon5 c.C447T p.C149C . . . ARNT2 9915 hgsc.bcm.edu 36 15 78549819 78549819 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014862 exon4 c.A400G p.T134A . . . BNC1 646 hgsc.bcm.edu 36 15 81723377 81723377 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001717 exon4 c.A1630G p.I544V . . . BLM 641 hgsc.bcm.edu 36 15 89109563 89109563 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000057 exon9 c.C2108T p.A703V . . . PRC1 9055 hgsc.bcm.edu 36 15 89320984 89320984 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003981 exon9 c.C1129T p.R377X . . . SV2B 9899 hgsc.bcm.edu 36 15 89636785 89636785 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014848 exon14 c.G2051A p.X684X . . . ABHD2 11057 hgsc.bcm.edu 36 15 87460752 87460753 + Frame_Shift_Del DEL AA AA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AA AA AA - AA AA Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152924 exon3 c.190_191del p.64_64del . . . UNC45A 55898 hgsc.bcm.edu 36 15 89289285 89289286 + Frame_Shift_Del DEL AA AA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AA AA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001039675 exon12 c.1142_1143del p.381_381del . . . ZNF276 92822 hgsc.bcm.edu 36 16 88331911 88331912 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152287 exon11 c.1376_1377insA p.R459fs . . . MYH11 4629 hgsc.bcm.edu 36 16 15759186 15759186 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001040114 exon14 c.C1595T p.P532L . . . TSC2 7249 hgsc.bcm.edu 36 16 2044429 2044429 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001114382 exon5 c.G468A p.L156L . . . ZP2 7783 hgsc.bcm.edu 36 16 21125705 21125705 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003460 exon5 c.C438A p.T146T . . . SULT1A2 6799 hgsc.bcm.edu 36 16 28511222 28511222 + Missense_Mutation SNP C C T rs45583638 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001054 exon7 c.G638A p.R213H . . . DCTPP1 79077 hgsc.bcm.edu 36 16 30348762 30348762 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024096 exon1 c.G41A p.G14E . . . ADCY9 115 hgsc.bcm.edu 36 16 3983429 3983429 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001116 exon4 c.C1968T p.D656D . . . C16orf71 146562 hgsc.bcm.edu 36 16 4730155 4730155 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139170 exon4 c.C277T p.P93S . . . SEPT12 124404 hgsc.bcm.edu 36 16 4769785 4769785 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144605 exon8 c.C730A p.R244R . . . SALL1 6299 hgsc.bcm.edu 36 16 49732320 49732320 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002968 exon2 c.G1314A p.A438A . . . GNAO1 2775 hgsc.bcm.edu 36 16 54928157 54928157 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138736 exon6 c.G607A p.G203R . . . SLC12A3 6559 hgsc.bcm.edu 36 16 55483517 55483517 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000339 exon20 c.C2390T p.A797V . . . CCDC113 29070 hgsc.bcm.edu 36 16 56845430 56845430 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014157 exon3 c.C256T p.R86W . . . PDP2 57546 hgsc.bcm.edu 36 16 65475955 65475955 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020786 exon2 c.C267T p.G89G . . . LCAT 3931 hgsc.bcm.edu 36 16 66534470 66534470 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000229 exon2 c.G301A p.D101N . . . DPEP3 64180 hgsc.bcm.edu 36 16 66569174 66569174 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001129758 exon6 c.C891T p.D297D . . . SLC7A6 9057 hgsc.bcm.edu 36 16 66888105 66888105 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003983 exon10 c.C1344A p.T448T . . . CDH3 1001 hgsc.bcm.edu 36 16 67289682 67289682 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001793 exon16 c.G2368A p.A790T . . . C16orf46 123775 hgsc.bcm.edu 36 16 79652621 79652621 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152337 exon4 c.G834A p.T278T . . . LRRC50 123872 hgsc.bcm.edu 36 16 82765798 82765798 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178452 exon10 c.A1667G p.D556G . . . COG4 25839 hgsc.bcm.edu 36 16 69074141 69074143 + In_Frame_Del DEL TGT TGT - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TGT TGT TGT - TGT TGT Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015386 exon15 c.1910_1912del p.637_638del . . . RHBDL3 162494 hgsc.bcm.edu 36 17 27649272 27649273 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138328 exon6 c.717_718insC p.V239fs . . . MYH8 4626 hgsc.bcm.edu 36 17 10237165 10237165 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002472 exon36 c.C5254T p.R1752C . . . MYH1 4619 hgsc.bcm.edu 36 17 10339136 10339136 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005963 exon37 c.T5303C p.M1768T . . . TMEM220 388335 hgsc.bcm.edu 36 17 10569074 10569074 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001004313 exon4 c.T266A p.I89N . . . ZNF624 57547 hgsc.bcm.edu 36 17 16466601 16466601 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020787 exon6 c.C2324T p.T775I . . . PEMT 10400 hgsc.bcm.edu 36 17 17366431 17366431 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_148172 exon3 c.G208A p.A70T . . . SMG6 23293 hgsc.bcm.edu 36 17 2148958 2148958 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001170957 exon2 c.G1746A p.A582A . . . SRR 63826 hgsc.bcm.edu 36 17 2173739 2173739 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021947 exon8 c.T845C p.I282T . . . TNFAIP1 7126 hgsc.bcm.edu 36 17 23692448 23692448 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021137 exon4 c.A434G p.E145G . . . PHF12 57649 hgsc.bcm.edu 36 17 24275154 24275154 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001033561 exon4 c.A614G p.Q205R . . . TAOK1 57551 hgsc.bcm.edu 36 17 24885341 24885341 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020791 exon19 c.C2441T p.A814V . . . OR1D2 4991 hgsc.bcm.edu 36 17 2942579 2942579 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002548 exon1 c.C462A p.L154L . . . LIG3 3980 hgsc.bcm.edu 36 17 30340716 30340716 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013975 exon4 c.C810T p.C270C . . . C17orf66 256957 hgsc.bcm.edu 36 17 31214160 31214160 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152781 exon8 c.G708A p.T236T . . . AP1GBP1 11276 hgsc.bcm.edu 36 17 33005095 33005095 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007247 exon10 c.G1101C p.R367S . . . TRPV3 162514 hgsc.bcm.edu 36 17 3395234 3395234 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145068 exon3 c.C201A p.P67P . . . WIPF2 147179 hgsc.bcm.edu 36 17 35674722 35674722 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_133264 exon5 c.C768T p.R256R . . . KRT26 353288 hgsc.bcm.edu 36 17 36179617 36179617 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181539 exon5 c.C884T p.A295V . . . KRT28 162605 hgsc.bcm.edu 36 17 36208121 36208121 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181535 exon3 c.C582T p.N194N . . . ATP6V0A1 535 hgsc.bcm.edu 36 17 37866475 37866475 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130021 exon2 c.G37A p.A13T . . . DHX8 1659 hgsc.bcm.edu 36 17 38924109 38924109 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004941 exon4 c.C358T p.P120S . . . ZZEF1 23140 hgsc.bcm.edu 36 17 3900904 3900904 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015113 exon36 c.C5783T p.T1928M . . . DUSP3 1845 hgsc.bcm.edu 36 17 39207683 39207683 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004090 exon2 c.A275G p.D92G . . . FMNL1 752 hgsc.bcm.edu 36 17 40669358 40669358 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005892 exon7 c.C687T p.V229V . . . ARHGAP27 201176 hgsc.bcm.edu 36 17 40838175 40838175 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_199282 exon3 c.T123C p.G41G . . . CALCOCO2 10241 hgsc.bcm.edu 36 17 44280706 44280706 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005831 exon4 c.G307A p.E103K . . . COL1A1 1277 hgsc.bcm.edu 36 17 45629559 45629559 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000088 exon10 c.G731A p.R244H . . . MRPL27 51264 hgsc.bcm.edu 36 17 45800497 45800497 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016504 exon4 c.T402C p.V134V . . . CHAD 1101 hgsc.bcm.edu 36 17 45900975 45900975 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001267 exon1 c.G199A p.A67T . . . PSMB6 5694 hgsc.bcm.edu 36 17 4648614 4648614 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002798 exon6 c.G659A p.R220Q . . . KIF2B 84643 hgsc.bcm.edu 36 17 49257130 49257130 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032559 exon1 c.T1737G p.D579E . . . MSI2 124540 hgsc.bcm.edu 36 17 53048351 53048351 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_170721 exon8 c.C547T p.P183S . . . SFRS1 6426 hgsc.bcm.edu 36 17 53438245 53438245 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001078166 exon3 c.C468T p.G156G . . . EPX 8288 hgsc.bcm.edu 36 17 53626341 53626341 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000502 exon5 c.G483A p.G161G . . . MTMR4 9110 hgsc.bcm.edu 36 17 53944797 53944797 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004687 exon4 c.A163G p.I55V . . . RAD51C 5889 hgsc.bcm.edu 36 17 54164848 54164848 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_058216 exon8 c.G970A p.A324T . . . DHX40 79665 hgsc.bcm.edu 36 17 55037680 55037680 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024612 exon17 c.G2063A p.R688H . . . SMURF2 64750 hgsc.bcm.edu 36 17 59989460 59989460 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022739 exon11 c.A1103G p.Y368C . . . BPTF 2186 hgsc.bcm.edu 36 17 63372015 63372015 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182641 exon21 c.G6729A p.L2243L . . . XAF1 54739 hgsc.bcm.edu 36 17 6602149 6602149 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_199139 exon2 c.C50A p.S17Y . . . SLC16A13 201232 hgsc.bcm.edu 36 17 6882566 6882566 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_201566 exon3 c.G715A p.A239T . . . NAT9 26151 hgsc.bcm.edu 36 17 70280723 70280723 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015654 exon4 c.G241A p.A81T . . . TSEN54 283989 hgsc.bcm.edu 36 17 71029186 71029186 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207346 exon7 c.G623A p.R208Q . . . EXOC7 23265 hgsc.bcm.edu 36 17 71596976 71596976 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145299 exon9 c.G991A p.V331M . . . RHBDF2 79651 hgsc.bcm.edu 36 17 71982774 71982774 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024599 exon10 c.C1247T p.T416M . . . USP36 57602 hgsc.bcm.edu 36 17 74342992 74342992 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025090 exon4 c.C440T p.A147V . . . DNAH2 146754 hgsc.bcm.edu 36 17 7640578 7640578 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020877 exon49 c.G7746A p.K2582K . . . DNAH2 146754 hgsc.bcm.edu 36 17 7643227 7643227 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020877 exon55 c.C8641T p.R2881C . . . RPTOR 57521 hgsc.bcm.edu 36 17 76528970 76528970 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020761 exon25 c.G2999T p.R1000M . . . DYSFIP1 116729 hgsc.bcm.edu 36 17 77385720 77385720 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001007533 exon2 c.G289A p.G97S . . . CHD3 1107 hgsc.bcm.edu 36 17 7751396 7751396 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005852 exon32 c.G4789A p.A1597T . . . NTN1 9423 hgsc.bcm.edu 36 17 9006978 9006978 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004822 exon3 c.A1142G p.H381R . . . GAS7 8522 hgsc.bcm.edu 36 17 9803262 9803262 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003644 exon1 c.C87T p.S29S . . . BRIP1 83990 hgsc.bcm.edu 36 17 57293681 57293682 + Frame_Shift_Del DEL AT AT - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AT AT AT - AT AT Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032043 wholegene . . . . . GPS2 2874 hgsc.bcm.edu 36 17 7158429 7158431 + In_Frame_Del DEL CTC CTC - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CTC CTC . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004489 exon4 c.220_222del p.74_74del . . . C18orf19 125228 hgsc.bcm.edu 36 18 13671626 13671626 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152352 exon2 c.A451C p.T151P . . . LAMA3 3909 hgsc.bcm.edu 36 18 19741583 19741583 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001127718 exon15 c.A1795G p.T599A . . . KCTD1 284252 hgsc.bcm.edu 36 18 22289848 22289848 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198991 exon6 c.C631T p.Q211X . . . DSG4 147409 hgsc.bcm.edu 36 18 27224650 27224650 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001134453 exon6 c.C551T p.A184V . . . B4GALT6 9331 hgsc.bcm.edu 36 18 27464956 27464956 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004775 exon6 c.G740A p.R247H . . . RPRD1A 55197 hgsc.bcm.edu 36 18 31827119 31827119 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018170 exon7 c.A932G p.E311G . . . PIK3C3 5289 hgsc.bcm.edu 36 18 37891986 37891986 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002647 exon22 c.G2405A p.C802Y . . . KATNAL2 83473 hgsc.bcm.edu 36 18 42847481 42847481 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031303 exon8 c.C602A p.P201H . . . ST8SIA3 51046 hgsc.bcm.edu 36 18 53171132 53171132 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015879 exon1 c.C57G p.S19R . . . NARS 4677 hgsc.bcm.edu 36 18 53421100 53421100 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004539 exon12 c.T1325C p.V442A . . . EPB41L3 23136 hgsc.bcm.edu 36 18 5387348 5387348 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012307 exon18 c.G2550T p.K850N . . . ARHGAP28 79822 hgsc.bcm.edu 36 18 6877212 6877212 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001010000 exon11 c.C1033T p.P345S . . . LAMA1 284217 hgsc.bcm.edu 36 18 6951751 6951751 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005559 exon53 c.G7460A p.R2487Q . . . TSHZ1 10194 hgsc.bcm.edu 36 18 71128672 71128672 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005786 exon2 c.G2187A p.L729L . . . SPTBN4 57731 hgsc.bcm.edu 36 19 45754955 45754956 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020971 exon26 c.5476_5477insG p.R1826fs . . . ZNF233 353355 hgsc.bcm.edu 36 19 49468958 49468959 + In_Frame_Ins INS - - CAG novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181756 exon5 c.305_306insCAG p.D102delinsDS . . . NAPA 8775 hgsc.bcm.edu 36 19 52688539 52688540 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003827 exon5 c.366_367insA p.K122fs . . . DNMT1 1786 hgsc.bcm.edu 36 19 10112811 10112811 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130823 exon31 c.C3364T p.P1122S . . . MRPL4 51073 hgsc.bcm.edu 36 19 10226272 10226272 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_146388 exon4 c.A283T p.I95L . . . PDE4A 5141 hgsc.bcm.edu 36 19 10438875 10438875 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001111309 exon15 c.G2056T p.D686Y . . . GCDH 2639 hgsc.bcm.edu 36 19 12871342 12871342 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000159 exon12 c.C1304T p.T435M . . . NDUFB7 4713 hgsc.bcm.edu 36 19 14538707 14538707 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004146 exon2 c.C151T p.L51L . . . OR7A5 26659 hgsc.bcm.edu 36 19 14799690 14799690 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017506 exon1 c.C364T p.R122W . . . NOTCH3 4854 hgsc.bcm.edu 36 19 15152013 15152013 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000435 exon20 c.G3197A p.S1066N . . . CYP4F22 126410 hgsc.bcm.edu 36 19 15501611 15501611 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173483 exon4 c.C314T p.P105L . . . CYP4F12 66002 hgsc.bcm.edu 36 19 15667862 15667862 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_023944 exon10 c.G1232A p.G411D . . . USHBP1 83878 hgsc.bcm.edu 36 19 17230048 17230048 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031941 exon8 c.C1193T p.A398V . . . KIAA1683 80726 hgsc.bcm.edu 36 19 18237953 18237953 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025249 exon3 c.A1397G p.N466S . . . FKBP8 23770 hgsc.bcm.edu 36 19 18511472 18511472 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012181 exon3 c.G351A p.P117P . . . GMIP 51291 hgsc.bcm.edu 36 19 19610242 19610242 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016573 exon8 c.A587G p.K196R . . . TMPRSS9 360200 hgsc.bcm.edu 36 19 2340785 2340785 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182973 exon1 c.T2C p.M1T . . . TLE6 79816 hgsc.bcm.edu 36 19 2945023 2945023 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001143986 exon16 c.G1544A p.W515X . . . CCNE1 898 hgsc.bcm.edu 36 19 35006520 35006520 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_057182 exon10 c.C1184T p.A395V . . . ZNF507 22847 hgsc.bcm.edu 36 19 37536813 37536813 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001136156 exon3 c.C1237T p.R413C . . . DPY19L3 147991 hgsc.bcm.edu 36 19 37619313 37619313 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001172774 exon5 c.G450A p.Q150Q . . . C19orf40 91442 hgsc.bcm.edu 36 19 38155994 38155994 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152266 exon2 c.C52T p.H18Y . . . GPATCH1 55094 hgsc.bcm.edu 36 19 38309459 38309459 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018025 exon19 c.G2745A p.S915S . . . PDCD2L 84306 hgsc.bcm.edu 36 19 39608745 39608745 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032346 exon7 c.G957A p.V319V . . . HPN 3249 hgsc.bcm.edu 36 19 40248725 40248725 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002151 exon13 c.C1164T p.G388G . . . CD22 933 hgsc.bcm.edu 36 19 40528456 40528456 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001185101 exon10 c.C1789T p.R597X . . . ATP4A 495 hgsc.bcm.edu 36 19 40745988 40745988 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000704 exon3 c.C179T p.A60V . . . THAP8 199745 hgsc.bcm.edu 36 19 41222397 41222397 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152658 exon3 c.A340G p.T114A . . . WDR62 284403 hgsc.bcm.edu 36 19 41283490 41283490 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001083961 exon23 c.T2740G p.S914A . . . STAP2 55620 hgsc.bcm.edu 36 19 4276421 4276421 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001013841 exon10 c.C951T p.G317G . . . SIPA1L3 23094 hgsc.bcm.edu 36 19 43347169 43347169 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015073 exon15 c.C3991T p.P1331S . . . RYR1 6261 hgsc.bcm.edu 36 19 43634296 43634296 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001042723 exon12 c.G1175A p.C392Y . . . ZNF780A 284323 hgsc.bcm.edu 36 19 45272300 45272300 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001142578 exon6 c.G1889A p.R630H . . . HNRNPUL1 11100 hgsc.bcm.edu 36 19 46469920 46469920 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144732 exon3 c.G212A p.R71Q . . . ERF 2077 hgsc.bcm.edu 36 19 47445822 47445822 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006494 exon3 c.G370A p.A124T . . . M6PRBP1 10226 hgsc.bcm.edu 36 19 4790394 4790394 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001164194 exon8 c.C1079T p.T360M . . . ZNF224 7767 hgsc.bcm.edu 36 19 49303367 49303367 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013398 exon6 c.G1214A p.C405Y . . . ZNF224 7767 hgsc.bcm.edu 36 19 49304106 49304106 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013398 exon6 c.A1953G p.P651P . . . BCL3 602 hgsc.bcm.edu 36 19 49954590 49954590 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005178 exon9 c.C1243A p.P415T . . . MARK4 57787 hgsc.bcm.edu 36 19 50475818 50475818 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001199867 exon12 c.G1262T p.R421M . . . PTPRS 5802 hgsc.bcm.edu 36 19 5176777 5176777 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002850 exon17 c.G2455A p.A819T . . . GPR77 27202 hgsc.bcm.edu 36 19 52536190 52536190 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018485 exon2 c.C294T p.G98G . . . PLA2G4C 8605 hgsc.bcm.edu 36 19 53257149 53257149 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001159323 exon14 c.C1175T p.T392I . . . RCN3 57333 hgsc.bcm.edu 36 19 54732257 54732257 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020650 exon4 c.C601T p.R201W . . . POLD1 5424 hgsc.bcm.edu 36 19 55609918 55609918 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002691 exon20 c.G2423A p.R808H . . . ZNF350 59348 hgsc.bcm.edu 36 19 57164145 57164145 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021632 exon3 c.C67A p.Q23K . . . ZNF614 80110 hgsc.bcm.edu 36 19 57213454 57213454 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025040 exon3 c.T121C p.Y41H . . . ZNF816A 125893 hgsc.bcm.edu 36 19 58145874 58145874 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001031665 exon5 c.C966T p.F322F . . . VN1R4 317703 hgsc.bcm.edu 36 19 58462110 58462110 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173857 exon1 c.C621T p.H207H . . . RPS9 6203 hgsc.bcm.edu 36 19 59401970 59401970 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001013 exon4 c.C235T p.R79W . . . BRSK1 84446 hgsc.bcm.edu 36 19 60509507 60509507 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032430 exon17 c.G1966A p.V656I . . . PEG3 5178 hgsc.bcm.edu 36 19 62017914 62017914 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001146186 exon7 c.T3708A p.H1236Q . . . ACER1 125981 hgsc.bcm.edu 36 19 6260776 6260776 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_133492 exon4 c.G420A p.T140T . . . ZNF329 79673 hgsc.bcm.edu 36 19 63331982 63331982 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024620 exon4 c.A701T p.N234I . . . FCER2 2208 hgsc.bcm.edu 36 19 7661121 7661121 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002002 exon10 c.G652T p.G218C . . . CD209 30835 hgsc.bcm.edu 36 19 7715881 7715881 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001144894 exon3 c.C714T p.T238T . . . ZNF559 84527 hgsc.bcm.edu 36 19 9314181 9314181 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032497 exon6 c.C1054T p.P352S . . . PRMT1 3276 hgsc.bcm.edu 36 19 54883245 54883247 + In_Frame_Del DEL CAC CAC - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CAC CAC CAC - CAC CAC Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198318 exon10 c.993_995del p.331_332del . . . BARHL2 343472 hgsc.bcm.edu 36 1 90952849 90952850 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020063 exon2 c.678_679insC p.P226fs . . . KIF1B 23095 hgsc.bcm.edu 36 1 10308907 10308907 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015074 exon25 c.G2689A p.A897T . . . AMPD2 271 hgsc.bcm.edu 36 1 109969874 109969874 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004037 exon3 c.G452A p.S151N . . . MASP2 10747 hgsc.bcm.edu 36 1 11025611 11025611 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006610 exon6 c.G797T p.R266M . . . C1orf88 128344 hgsc.bcm.edu 36 1 111691882 111691882 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181643 exon3 c.G223A p.A75T . . . DCLRE1B 64858 hgsc.bcm.edu 36 1 114255658 114255658 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022836 exon4 c.G921T p.Q307H . . . DENND2C 163259 hgsc.bcm.edu 36 1 114962587 114962587 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198459 exon5 c.G1096T p.G366W . . . VANGL1 81839 hgsc.bcm.edu 36 1 116007918 116007918 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001172411 exon4 c.T312A p.D104E . . . TRIM45 80263 hgsc.bcm.edu 36 1 117462758 117462758 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145635 exon2 c.G643A p.V215M . . . MIIP 60672 hgsc.bcm.edu 36 1 12011903 12011903 + Silent SNP C T T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021933 exon6 c.C693T p.S231S . . . DHRS3 9249 hgsc.bcm.edu 36 1 12555356 12555356 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004753 exon5 c.G811A p.V271I . . . PRDM2 7799 hgsc.bcm.edu 36 1 13977959 13977959 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001007257 exon3 c.C479A p.P160Q . . . PDE4DIP 9659 hgsc.bcm.edu 36 1 143628890 143628890 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001198832 exon15 c.G1769A p.R590H . . . ACP6 51205 hgsc.bcm.edu 36 1 145592954 145592954 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016361 exon6 c.G759A p.L253L . . . PRPF3 9129 hgsc.bcm.edu 36 1 148564107 148564107 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004698 exon2 c.C83A p.P28H . . . NPR1 4881 hgsc.bcm.edu 36 1 151926182 151926182 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000906 exon12 c.G1930A p.V644I . . . INTS3 65123 hgsc.bcm.edu 36 1 151999488 151999488 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_023015 exon12 c.C1315T p.R439C . . . DCST2 127579 hgsc.bcm.edu 36 1 153263687 153263687 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144622 exon11 c.C1627A p.L543M . . . C1orf2 10712 hgsc.bcm.edu 36 1 153490548 153490548 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006589 exon3 c.T344G p.L115R . . . HCN3 57657 hgsc.bcm.edu 36 1 153522220 153522220 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020897 exon6 c.G1318A p.V440I . . . ASH1L 55870 hgsc.bcm.edu 36 1 153757689 153757689 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018489 exon2 c.G246T p.E82D . . . IQGAP3 128239 hgsc.bcm.edu 36 1 154770929 154770929 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178229 exon29 c.A3728G p.H1243R . . . CD1A 909 hgsc.bcm.edu 36 1 156493922 156493922 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001763 exon5 c.G971T p.R324L . . . OR10J3 441911 hgsc.bcm.edu 36 1 157550577 157550577 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001004467 exon1 c.G497A p.G166D . . . SLAMF8 56833 hgsc.bcm.edu 36 1 158066389 158066389 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020125 exon2 c.G150A p.W50X . . . VSIG8 391123 hgsc.bcm.edu 36 1 158095234 158095234 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001013661 exon2 c.C142A p.L48M . . . KCNJ9 3765 hgsc.bcm.edu 36 1 158320586 158320586 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004983 exon2 c.C142A p.L48M . . . IGSF8 93185 hgsc.bcm.edu 36 1 158329476 158329476 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052868 exon4 c.C1174T p.R392W . . . PVRL4 81607 hgsc.bcm.edu 36 1 159309092 159309092 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_030916 exon9 c.C1516T p.R506W . . . C1orf192 257177 hgsc.bcm.edu 36 1 159602039 159602039 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001013625 exon4 c.C249A p.S83S . . . ATF6 22926 hgsc.bcm.edu 36 1 160056072 160056072 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007348 exon8 c.G935A p.R312H . . . OLFML2B 25903 hgsc.bcm.edu 36 1 160221281 160221281 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015441 exon7 c.G1588A p.V530I . . . CLCNKA 1187 hgsc.bcm.edu 36 1 16230858 16230858 + Silent SNP G G A rs5254 unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004070 exon16 c.G1689A p.P563P . . . FBXO42 54455 hgsc.bcm.edu 36 1 16452734 16452734 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018994 exon7 c.C847A p.R283R . . . RCSD1 92241 hgsc.bcm.edu 36 1 165933312 165933312 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052862 exon6 c.C827T p.P276L . . . ATP1B1 481 hgsc.bcm.edu 36 1 167347276 167347276 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001677 exon2 c.G142T p.G48C . . . F5 2153 hgsc.bcm.edu 36 1 167761853 167761853 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000130 exon18 c.G5626T p.A1876S . . . PRRX1 5396 hgsc.bcm.edu 36 1 168962015 168962015 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006902 exon3 c.C448T p.R150C . . . VAMP4 8674 hgsc.bcm.edu 36 1 169942134 169942134 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001185127 exon7 c.T390C p.I130I . . . TNN 63923 hgsc.bcm.edu 36 1 173354433 173354433 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022093 exon11 c.G2500A p.A834T . . . TNN 63923 hgsc.bcm.edu 36 1 173371650 173371650 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022093 exon16 c.G3377A p.W1126X . . . RFWD2 64326 hgsc.bcm.edu 36 1 174279485 174279485 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022457 exon13 c.G1514T p.R505M . . . FAM5B 57795 hgsc.bcm.edu 36 1 175512112 175512112 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021165 exon6 c.G931A p.A311T . . . C1orf125 126859 hgsc.bcm.edu 36 1 177680782 177680782 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144696 exon16 c.G1618A p.D540N . . . LAMC2 3918 hgsc.bcm.edu 36 1 181471412 181471412 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018891 exon16 c.C2380T p.R794C . . . HMCN1 83872 hgsc.bcm.edu 36 1 184237379 184237379 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031935 exon28 c.A4231G p.N1411D . . . KLHDC7A 127707 hgsc.bcm.edu 36 1 18680878 18680878 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152375 exon1 c.G816T p.E272D . . . PAX7 5081 hgsc.bcm.edu 36 1 18899765 18899765 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013945 exon6 c.G812A p.R271H . . . KCNT2 343450 hgsc.bcm.edu 36 1 194551680 194551680 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198503 exon21 c.T2448C p.D816D . . . ASPM 259266 hgsc.bcm.edu 36 1 195326661 195326661 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018136 exon23 c.G9578T p.R3193L . . . ASPM 259266 hgsc.bcm.edu 36 1 195339065 195339065 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018136 exon18 c.A5939G p.Y1980C . . . ZBTB41 360023 hgsc.bcm.edu 36 1 195424114 195424114 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_194314 exon4 c.T1477C p.C493R . . . LHX9 56956 hgsc.bcm.edu 36 1 196163422 196163422 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020204 exon4 c.G812A p.R271Q . . . PTPRC 5788 hgsc.bcm.edu 36 1 196967425 196967425 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_080921 exon15 c.A1432G p.T478A . . . CACNA1S 779 hgsc.bcm.edu 36 1 199284796 199284796 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000069 exon35 c.T4296C p.P1432P . . . CACNA1S 779 hgsc.bcm.edu 36 1 199347976 199347976 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000069 exon1 c.C115A p.P39T . . . RNPEP 6051 hgsc.bcm.edu 36 1 200225259 200225259 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020216 exon3 c.G714T p.L238L . . . NFASC 23114 hgsc.bcm.edu 36 1 203209131 203209131 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001160331 exon10 c.C1273T p.H425Y . . . DYRK3 8444 hgsc.bcm.edu 36 1 204888838 204888838 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003582 exon3 c.G1672A p.V558I . . . CAMK1G 57172 hgsc.bcm.edu 36 1 207852828 207852828 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020439 exon12 c.C1416T p.V472V . . . SYT14 255928 hgsc.bcm.edu 36 1 208340229 208340229 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_153262 exon6 c.C964A p.P322T . . . KIF17 57576 hgsc.bcm.edu 36 1 20889279 20889279 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001122819 exon7 c.G1370A p.R457Q . . . ANGEL2 90806 hgsc.bcm.edu 36 1 211245163 211245163 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144567 exon5 c.G969A p.T323T . . . PROX1 5629 hgsc.bcm.edu 36 1 212236707 212236707 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002763 exon2 c.T206A p.V69E . . . CENPF 1063 hgsc.bcm.edu 36 1 212885916 212885916 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016343 exon13 c.G6380A p.R2127H . . . USH2A 7399 hgsc.bcm.edu 36 1 213887536 213887536 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_206933 exon67 c.G14742A p.E4914E . . . GPATCH2 55105 hgsc.bcm.edu 36 1 215859950 215859950 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018040 exon2 c.C571T p.Q191X . . . GPATCH2 55105 hgsc.bcm.edu 36 1 215860277 215860277 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018040 exon2 c.T244C p.W82R . . . SPATA17 128153 hgsc.bcm.edu 36 1 215871351 215871351 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138796 exon1 c.C8T p.T3M . . . EPRS 2058 hgsc.bcm.edu 36 1 218270359 218270359 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004446 exon6 c.G615T p.E205D . . . RAB3GAP2 25782 hgsc.bcm.edu 36 1 218412678 218412678 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012414 exon22 c.G2340T p.K780N . . . MOSC1 64757 hgsc.bcm.edu 36 1 219037883 219037883 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022746 exon4 c.G657A p.A219A . . . USP48 84196 hgsc.bcm.edu 36 1 21904914 21904914 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032236 exon19 c.G2277A p.K759K . . . HSPG2 3339 hgsc.bcm.edu 36 1 22073787 22073787 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005529 exon27 c.G3437A p.R1146H . . . DISP1 84976 hgsc.bcm.edu 36 1 221245352 221245352 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032890 exon8 c.G3990A p.T1330T . . . NVL 4931 hgsc.bcm.edu 36 1 222558155 222558155 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002533 exon9 c.C853T p.R285C . . . EPHX1 2052 hgsc.bcm.edu 36 1 224099601 224099601 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001136018 exon9 c.C1298T p.A433V . . . CDC42BPA 8476 hgsc.bcm.edu 36 1 225397293 225397293 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014826 exon9 c.T1199C p.V400A . . . C1QC 714 hgsc.bcm.edu 36 1 22846616 22846616 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_172369 exon3 c.G491A p.G164D . . . CAPN9 10753 hgsc.bcm.edu 36 1 228981421 228981421 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016452 exon8 c.G955A p.A319T . . . CHML 1122 hgsc.bcm.edu 36 1 239865380 239865380 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001821 exon1 c.C312T p.Y104Y . . . WDR64 128025 hgsc.bcm.edu 36 1 240031086 240031086 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144625 exon27 c.T3192A p.N1064K . . . CCDC21 64793 hgsc.bcm.edu 36 1 26471139 26471139 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022778 exon11 c.C1784T p.S595L . . . LIN28 79727 hgsc.bcm.edu 36 1 26625321 26625321 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024674 exon4 c.T415A p.C139S . . . MECR 51102 hgsc.bcm.edu 36 1 29402301 29402301 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001024732 exon5 c.C354T p.S118S . . . TSSK3 81629 hgsc.bcm.edu 36 1 32602124 32602124 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052841 exon2 c.C487T p.R163W . . . CSF3R 1441 hgsc.bcm.edu 36 1 36705453 36705453 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_172313 exon16 c.A2005G p.S669G . . . KIAA0562 9731 hgsc.bcm.edu 36 1 3721906 3721906 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014704 exon22 c.G2698C p.G900R . . . DNALI1 7802 hgsc.bcm.edu 36 1 37800285 37800285 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003462 exon5 c.C659T p.T220M . . . MTF1 4520 hgsc.bcm.edu 36 1 38060862 38060862 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005955 exon9 c.G1285A p.E429K . . . MTF1 4520 hgsc.bcm.edu 36 1 38095557 38095557 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005955 exon2 c.G361A p.A121T . . . MACF1 23499 hgsc.bcm.edu 36 1 39626699 39626699 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012090 exon54 c.A9412G p.R3138G . . . KCNQ4 9132 hgsc.bcm.edu 36 1 41073276 41073276 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004700 exon12 c.C1664T p.P555L . . . EBNA1BP2 10969 hgsc.bcm.edu 36 1 43409788 43409788 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006824 exon3 c.A272G p.K91R . . . WDR65 149465 hgsc.bcm.edu 36 1 43419923 43419923 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001167966 exon3 c.C289T p.R97C . . . GPBP1L1 60313 hgsc.bcm.edu 36 1 45893061 45893061 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021639 exon6 c.G218A p.R73H . . . IPP 3652 hgsc.bcm.edu 36 1 45967878 45967878 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005897 exon4 c.C875T p.A292V . . . RAD54L 8438 hgsc.bcm.edu 36 1 46498344 46498344 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001142548 exon6 c.G393A p.Q131Q . . . FAF1 11124 hgsc.bcm.edu 36 1 50944062 50944062 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007051 exon7 c.G641A p.S214N . . . MRPL37 51253 hgsc.bcm.edu 36 1 54438813 54438813 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016491 exon1 c.C309T p.A103A . . . ACOT11 26027 hgsc.bcm.edu 36 1 54832300 54832300 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_147161 exon5 c.G471T p.K157N . . . OMA1 115209 hgsc.bcm.edu 36 1 58744352 58744352 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145243 exon8 c.C1333T p.R445X . . . L1TD1 54596 hgsc.bcm.edu 36 1 62445102 62445102 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019079 exon3 c.A214G p.T72A . . . DOCK7 85440 hgsc.bcm.edu 36 1 62780884 62780884 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033407 exon24 c.T2935C p.F979L . . . DOCK7 85440 hgsc.bcm.edu 36 1 62886406 62886406 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033407 exon6 c.C691T p.R231C . . . SGIP1 84251 hgsc.bcm.edu 36 1 66874262 66874262 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032291 exon4 c.G147A p.A49A . . . SGIP1 84251 hgsc.bcm.edu 36 1 66920381 66920381 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032291 exon15 c.C1056A p.L352L . . . SLC35D1 23169 hgsc.bcm.edu 36 1 67280584 67280584 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015139 exon8 c.G652A p.G218R . . . LRRC7 57554 hgsc.bcm.edu 36 1 69998586 69998586 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020794 exon1 c.G111A p.V37V . . . SLC44A5 204962 hgsc.bcm.edu 36 1 75458104 75458104 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152697 exon15 c.A1147T p.I383F . . . SLC44A5 204962 hgsc.bcm.edu 36 1 75481193 75481193 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152697 exon8 c.G437A p.R146H . . . RABGGTB 5876 hgsc.bcm.edu 36 1 76032831 76032831 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004582 exon9 c.G904A p.G302R . . . RABGGTB 5876 hgsc.bcm.edu 36 1 76032917 76032917 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004582 exon9 c.G990A p.V330V . . . PIGK 10026 hgsc.bcm.edu 36 1 77407590 77407590 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005482 exon4 c.G318T p.K106N . . . VAMP3 9341 hgsc.bcm.edu 36 1 7759896 7759896 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004781 exon3 c.G162T p.Q54H . . . USP33 23032 hgsc.bcm.edu 36 1 77939645 77939645 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015017 exon23 c.G2599A p.G867R . . . TNFRSF9 3604 hgsc.bcm.edu 36 1 7921416 7921416 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001561 exon4 c.T160C p.S54P . . . SLC45A1 50651 hgsc.bcm.edu 36 1 8308601 8308601 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001080397 exon3 c.G627A p.S209S . . . CTBS 1486 hgsc.bcm.edu 36 1 84802077 84802077 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004388 exon5 c.A724G p.I242V . . . MCOLN3 55283 hgsc.bcm.edu 36 1 85283466 85283466 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018298 exon2 c.C166T p.R56X . . . GBP6 163351 hgsc.bcm.edu 36 1 89620120 89620120 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198460 exon7 c.T1151C p.M384T . . . SLC2A7 155184 hgsc.bcm.edu 36 1 9001886 9001886 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207420 exon4 c.C405T p.V135V . . . TMEM56 148534 hgsc.bcm.edu 36 1 95429954 95429954 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152487 exon7 c.T734C p.I245T . . . LPPR4 9890 hgsc.bcm.edu 36 1 99544635 99544635 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014839 exon7 c.C1773T p.S591S . . . POGZ 23126 hgsc.bcm.edu 36 1 149644497 149644498 + Frame_Shift_Del DEL CA CA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CA CA CA - CA CA Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145796 exon17 c.3352_3353del p.1118_1118del . . . HRNR 388697 hgsc.bcm.edu 36 1 150460011 150460012 + Frame_Shift_Del DEL GC GC - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 GC GC . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001009931 exon3 c.717_718del p.239_240del . . . FLG2 388698 hgsc.bcm.edu 36 1 150591182 150591183 + Frame_Shift_Del DEL TG TG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TG TG . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001014342 exon3 c.5703_5704del p.1901_1902del . . . ASH1L 55870 hgsc.bcm.edu 36 1 153574624 153574624 + Frame_Shift_Del DEL T T - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018489 exon27 c.8683delA p.T2895fs . . . RCC2 55920 hgsc.bcm.edu 36 1 17621875 17621876 + Frame_Shift_Del DEL CT CT - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CT CT CT - CT CT Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001136204 exon4 c.567_568del p.189_190del . . . ARID1A 8289 hgsc.bcm.edu 36 1 26972769 26972771 + In_Frame_Del DEL GCA GCA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 GCA GCA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006015 exon16 c.3978_3980del p.1326_1327del . . . BXDC5 80135 hgsc.bcm.edu 36 1 84719263 84719264 + Frame_Shift_Del DEL AG AG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AG AG AG - AG AG Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025065 exon2 c.265_266del p.89_89del . . . ACOT8 10005 hgsc.bcm.edu 36 20 43910710 43910711 + Frame_Shift_Ins INS - - AATCA novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005469 exon3 c.274_275insTGATT p.L92_P93delinsX . . . SEC23B 10483 hgsc.bcm.edu 36 20 18439585 18439585 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032986 exon2 c.G106A p.V36I . . . STK35 140901 hgsc.bcm.edu 36 20 2045673 2045673 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_080836 exon3 c.G1254A p.S418S . . . ACSS1 84532 hgsc.bcm.edu 36 20 24951590 24951590 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032501 exon5 c.G946A p.A316T . . . ZNF337 26152 hgsc.bcm.edu 36 20 25603786 25603786 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015655 exon5 c.A2138G p.Y713C . . . RALY 22913 hgsc.bcm.edu 36 20 32128237 32128237 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016732 exon7 c.C613T p.L205L . . . EIF6 3692 hgsc.bcm.edu 36 20 33331918 33331918 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002212 exon4 c.A322G p.T108A . . . EPB41L1 2036 hgsc.bcm.edu 36 20 34271115 34271115 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012156 exon19 c.C2374A p.L792I . . . TGIF2 60436 hgsc.bcm.edu 36 20 34653241 34653241 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001199513 exon3 c.C707T p.P236L . . . SRC 6714 hgsc.bcm.edu 36 20 35455784 35455784 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005417 exon6 c.G423A p.A141A . . . MAFB 9935 hgsc.bcm.edu 36 20 38750645 38750645 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005461 exon1 c.G260A p.W87X . . . SGK2 10110 hgsc.bcm.edu 36 20 41631484 41631484 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_170693 exon6 c.C274T p.R92W SGK2,central_nervous_system,brain,Substitution - Missense,0 . . ZMYND8 23613 hgsc.bcm.edu 36 20 45352402 45352402 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012408 exon7 c.C684A p.G228G . . . PRNP 5621 hgsc.bcm.edu 36 20 4628437 4628437 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_183079 exon2 c.A571G p.T191A . . . PREX1 57580 hgsc.bcm.edu 36 20 46680706 46680706 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020820 exon36 c.G4560A p.T1520T . . . PREX1 57580 hgsc.bcm.edu 36 20 46684652 46684652 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020820 exon33 c.C4236A p.S1412S . . . PREX1 57580 hgsc.bcm.edu 36 20 46694403 46694403 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020820 exon27 c.C3552A p.T1184T . . . ARFGEF2 10564 hgsc.bcm.edu 36 20 47021134 47021134 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006420 exon10 c.G1261A p.V421I . . . PTGIS 5740 hgsc.bcm.edu 36 20 47561087 47561087 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000961 exon9 c.T1243C p.S415P . . . AURKA 6790 hgsc.bcm.edu 36 20 54381908 54381908 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198436 exon8 c.G817A p.A273T . . . CASS4 57091 hgsc.bcm.edu 36 20 54446036 54446036 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020356 exon2 c.G446A p.S149N . . . ZBP1 81030 hgsc.bcm.edu 36 20 55618620 55618620 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001160417 exon7 c.G1081A p.E361K . . . PHACTR3 116154 hgsc.bcm.edu 36 20 57751581 57751581 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_080672 exon2 c.C143T p.A48V . . . TCFL5 10732 hgsc.bcm.edu 36 20 60959328 60959328 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006602 exon4 c.G1102T p.G368C . . . PRPF6 24148 hgsc.bcm.edu 36 20 62124645 62124645 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012469 exon13 c.C1739T p.A580V . . . ZHX3 23051 hgsc.bcm.edu 36 20 39264722 39264726 + Frame_Shift_Del DEL TCACA TCACA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TCACA TCACA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015035 exon3 c.2245_2249del p.749_750del . . . CLDN17 26285 hgsc.bcm.edu 36 21 30460169 30460169 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012131 exon1 c.C638T p.T213M . . . LCA5L 150082 hgsc.bcm.edu 36 21 39703828 39703828 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152505 exon9 c.C1229T p.P410L . . . RRP1B 23076 hgsc.bcm.edu 36 21 43931133 43931133 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015056 exon12 c.A1030G p.S344G . . . PWP2 5822 hgsc.bcm.edu 36 21 44366516 44366516 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005049 exon14 c.C1667T p.A556V . . . TRPM2 7226 hgsc.bcm.edu 36 21 44611110 44611110 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003307 exon4 c.C469A p.L157I . . . TRPM2 7226 hgsc.bcm.edu 36 21 44679466 44679466 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003307 exon28 c.G3999A p.L1333L . . . PCNT 5116 hgsc.bcm.edu 36 21 46570847 46570847 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006031 exon2 c.C183T p.S61S . . . IL17RA 23765 hgsc.bcm.edu 36 22 15970518 15970519 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - C - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014339 exon13 c.2409_2410insC p.Q803fs . . . PI4KA 5297 hgsc.bcm.edu 36 22 19402002 19402002 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002650 exon13 c.C1567T p.Q523X . . . PPM1F 9647 hgsc.bcm.edu 36 22 20623947 20623947 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014634 exon3 c.A312G p.E104E . . . CABIN1 23523 hgsc.bcm.edu 36 22 22790606 22790606 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001199281 exon15 c.C1993T p.R665W . . . CRYBB1 1414 hgsc.bcm.edu 36 22 25327911 25327911 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001887 exon5 c.C507T p.D169D . . . MTMR3 8897 hgsc.bcm.edu 36 22 28748071 28748071 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021090 exon18 c.C3279T p.C1093C . . . MCM5 4174 hgsc.bcm.edu 36 22 34147330 34147330 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006739 exon15 c.C1852T p.R618C . . . CACNG2 10369 hgsc.bcm.edu 36 22 35428526 35428526 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006078 exon1 c.C42T p.T14T . . . SOX10 6663 hgsc.bcm.edu 36 22 36699517 36699517 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006941 exon4 c.C1332A p.P444P . . . EP300 2033 hgsc.bcm.edu 36 22 39903536 39903536 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001429 exon31 c.A5875G p.M1959V . . . L3MBTL2 83746 hgsc.bcm.edu 36 22 39950940 39950940 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031488 exon11 c.C1275T p.G425G . . . TCF20 6942 hgsc.bcm.edu 36 22 40894649 40894649 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005650 exon4 c.A5837G p.K1946R . . . PKDREJ 10343 hgsc.bcm.edu 36 22 45035035 45035035 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006071 exon1 c.C2849T p.A950V . . . ZBED4 9889 hgsc.bcm.edu 36 22 48664633 48664633 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014838 exon2 c.T1319G p.L440W . . . ALG12 79087 hgsc.bcm.edu 36 22 48683904 48683904 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024105 exon9 c.G1165A p.V389I . . . BCL2L11 10018 hgsc.bcm.edu 36 2 111598033 111598034 + In_Frame_Ins INS - - ACA novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138621 exon2 c.240_241insACA p.F80delinsFT . . . ORC4L 5000 hgsc.bcm.edu 36 2 148422238 148422239 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001190879 exon10 c.614_615insA p.R205fs . . . GALNT5 11227 hgsc.bcm.edu 36 2 157861238 157861239 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014568 exon5 c.1964_1965insA p.A655fs . . . KCNH7 90134 hgsc.bcm.edu 36 2 162965106 162965107 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - C - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033272 exon10 c.2246_2247insG p.A749fs . . . PGAP1 80055 hgsc.bcm.edu 36 2 197420080 197420081 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024989 exon22 c.2042_2043insC p.L681fs . . . SPAG16 79582 hgsc.bcm.edu 36 2 213913208 213913209 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024532 exon6 c.613_614insA p.E205fs . . . LONRF2 164832 hgsc.bcm.edu 36 2 100273285 100273285 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198461 exon10 c.T1787C p.I596T . . . NMS 129521 hgsc.bcm.edu 36 2 100453396 100453396 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001011717 exon1 c.G14A p.R5H . . . ODC1 4953 hgsc.bcm.edu 36 2 10501826 10501826 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002539 exon5 c.C295T p.Q99X . . . TGFBRAP1 9392 hgsc.bcm.edu 36 2 105291121 105291121 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004257 exon2 c.C70T p.R24C . . . TTL 150465 hgsc.bcm.edu 36 2 112968325 112968325 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_153712 exon3 c.G371T p.R124M . . . SLC20A1 6574 hgsc.bcm.edu 36 2 113133411 113133411 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005415 exon8 c.G1208A p.C403Y . . . GREB1 9687 hgsc.bcm.edu 36 2 11646427 11646427 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014668 exon10 c.G1264A p.E422K . . . TFCP2L1 29842 hgsc.bcm.edu 36 2 121709268 121709268 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014553 exon11 c.C1093T p.R365W . . . GPR148 344561 hgsc.bcm.edu 36 2 131203262 131203262 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207364 exon1 c.G68A p.S23N . . . LCT 3938 hgsc.bcm.edu 36 2 136282653 136282653 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002299 exon8 c.T3734C p.M1245T . . . LRP1B 53353 hgsc.bcm.edu 36 2 140809655 140809655 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018557 exon78 c.G12115T p.G4039W . . . LRP1B 53353 hgsc.bcm.edu 36 2 140975757 140975757 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018557 exon55 c.A8819G p.Q2940R . . . LRP1B 53353 hgsc.bcm.edu 36 2 141010720 141010720 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018557 exon46 c.G7542T p.S2514S . . . LRP1B 53353 hgsc.bcm.edu 36 2 141174641 141174641 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018557 exon41 c.G6447T p.R2149S . . . LRP1B 53353 hgsc.bcm.edu 36 2 141315078 141315078 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018557 exon30 c.T4993C p.W1665R . . . LRP1B 53353 hgsc.bcm.edu 36 2 141523140 141523140 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018557 exon11 c.T1674C p.P558P . . . GTDC1 79712 hgsc.bcm.edu 36 2 144421159 144421159 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001164629 exon12 c.C1307T p.P436L . . . RIF1 55183 hgsc.bcm.edu 36 2 151984999 151984999 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001177664 exon7 c.G553A p.A185T . . . CCDC148 130940 hgsc.bcm.edu 36 2 158874248 158874248 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138803 exon9 c.C1053T p.S351S . . . PLA2R1 22925 hgsc.bcm.edu 36 2 160578060 160578060 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007366 exon10 c.G1624A p.G542S . . . PLA2R1 22925 hgsc.bcm.edu 36 2 160593088 160593088 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007366 exon6 c.A986G p.H329R . . . LRP2 4036 hgsc.bcm.edu 36 2 169809626 169809626 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004525 exon22 c.C3253T p.R1085C LRP2,central_nervous_system,brain,Substitution - Missense,+1 . . LRP2 4036 hgsc.bcm.edu 36 2 169853817 169853817 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004525 exon9 c.A1007C p.Y336S . . . MAP1D 254042 hgsc.bcm.edu 36 2 172652205 172652205 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_199227 exon8 c.A819G p.L273L . . . TTN 7273 hgsc.bcm.edu 36 2 179373402 179373402 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_133379 exon4 c.G548A p.G183E . . . SESTD1 91404 hgsc.bcm.edu 36 2 179764797 179764797 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178123 exon2 c.T17C p.I6T . . . NEUROD1 4760 hgsc.bcm.edu 36 2 182250860 182250860 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002500 exon2 c.C973T p.R325C . . . ANKAR 150709 hgsc.bcm.edu 36 2 190311546 190311546 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144708 exon19 c.T3593C p.L1198P . . . HECW2 57520 hgsc.bcm.edu 36 2 196865654 196865654 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020760 exon14 c.C2880T p.D960D . . . ANKRD44 91526 hgsc.bcm.edu 36 2 197578789 197578789 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001195144 exon21 c.C2221T p.H741Y . . . PLCL1 5334 hgsc.bcm.edu 36 2 198657534 198657534 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006226 exon2 c.G1048A p.E350K . . . PLCL1 5334 hgsc.bcm.edu 36 2 198659000 198659000 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006226 exon2 c.C2514T p.H838H . . . CASP8 841 hgsc.bcm.edu 36 2 201858275 201858275 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033356 exon7 c.C1249T p.R417X . . . NOP58 51602 hgsc.bcm.edu 36 2 202868805 202868805 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015934 exon10 c.G1071T p.K357N . . . PUM2 23369 hgsc.bcm.edu 36 2 20326679 20326679 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015317 exon13 c.C1981T p.R661X . . . PIKFYVE 200576 hgsc.bcm.edu 36 2 208897192 208897192 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015040 exon18 c.C2272T p.R758W . . . PTH2R 5746 hgsc.bcm.edu 36 2 209010745 209010745 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005048 exon4 c.A305G p.H102R . . . MAP2 4133 hgsc.bcm.edu 36 2 210226152 210226152 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031847 exon4 c.C13T p.R5W . . . MAP2 4133 hgsc.bcm.edu 36 2 210226252 210226252 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031847 exon4 c.G113T p.G38V . . . MAP2 4133 hgsc.bcm.edu 36 2 210267543 210267543 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002374 exon7 c.A2404G p.M802V . . . APOB 338 hgsc.bcm.edu 36 2 21083355 21083355 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000384 exon26 c.T9890C p.L3297S . . . APOB 338 hgsc.bcm.edu 36 2 21085991 21085991 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000384 exon26 c.A7254G p.K2418K . . . SPAG16 79582 hgsc.bcm.edu 36 2 214502929 214502929 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024532 exon12 c.T1215C p.S405S . . . SPAG16 79582 hgsc.bcm.edu 36 2 214681170 214681170 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024532 exon14 c.A1533G p.I511M . . . ABCA12 26154 hgsc.bcm.edu 36 2 215526956 215526956 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173076 exon44 c.T6514C p.Y2172H . . . ABCA12 26154 hgsc.bcm.edu 36 2 215592644 215592644 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173076 exon12 c.A1409G p.D470G . . . IHH 3549 hgsc.bcm.edu 36 2 219633142 219633142 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002181 exon1 c.G292A p.G98S . . . GMPPA 29926 hgsc.bcm.edu 36 2 220075360 220075360 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_205847 exon6 c.C442T p.Q148X . . . CHPF 79586 hgsc.bcm.edu 36 2 220113934 220113934 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024536 exon3 c.A1046G p.Y349C . . . SLC4A3 6508 hgsc.bcm.edu 36 2 220201520 220201520 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005070 exon3 c.C201T p.S67S . . . SCG2 7857 hgsc.bcm.edu 36 2 224171945 224171945 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003469 exon2 c.C300T p.P100P . . . CUL3 8452 hgsc.bcm.edu 36 2 225047257 225047257 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003590 exon16 c.A2256G p.E752E . . . TRIP12 9320 hgsc.bcm.edu 36 2 230364163 230364163 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004238 exon29 c.T4239C p.G1413G . . . TRIP12 9320 hgsc.bcm.edu 36 2 230370755 230370755 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004238 exon23 c.T3294C p.H1098H . . . CHRND 1144 hgsc.bcm.edu 36 2 233107001 233107001 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000751 exon10 c.G1164T p.E388D . . . GIGYF2 26058 hgsc.bcm.edu 36 2 233379483 233379483 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001103148 exon14 c.G1660A p.A554T . . . SPP2 6694 hgsc.bcm.edu 36 2 234633856 234633856 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006944 exon4 c.C438T p.S146S . . . AGAP1 116987 hgsc.bcm.edu 36 2 236504260 236504260 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001037131 exon12 c.C1437T p.D479D . . . COL6A3 1293 hgsc.bcm.edu 36 2 237914333 237914333 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_057166 exon35 c.C6144T p.P2048P . . . COL6A3 1293 hgsc.bcm.edu 36 2 237937751 237937751 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_057166 exon10 c.T4077C p.S1359S . . . COL6A3 1293 hgsc.bcm.edu 36 2 237940304 237940304 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_057166 exon8 c.G3444A p.S1148S . . . HDAC4 9759 hgsc.bcm.edu 36 2 239731263 239731263 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006037 exon8 c.A818G p.D273G . . . THAP4 51078 hgsc.bcm.edu 36 2 242221365 242221365 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015963 exon2 c.C880T p.Q294X . . . DNMT3A 1788 hgsc.bcm.edu 36 2 25324565 25324565 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_175629 exon7 c.G700A p.G234R . . . KIF3C 3797 hgsc.bcm.edu 36 2 26005427 26005427 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002254 exon8 c.G2306A p.R769Q . . . AGBL5 60509 hgsc.bcm.edu 36 2 27131094 27131094 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001035507 exon5 c.G644T p.G215V . . . CAD 790 hgsc.bcm.edu 36 2 27310397 27310397 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004341 exon22 c.C3417T p.A1139A . . . ZNF513 130557 hgsc.bcm.edu 36 2 27454319 27454319 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144631 exon4 c.G1223A p.R408H . . . IFT172 26160 hgsc.bcm.edu 36 2 27535196 27535196 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015662 exon26 c.C2831T p.A944V . . . TTC27 55622 hgsc.bcm.edu 36 2 32896105 32896105 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001193509 exon19 c.C2236T p.R746W . . . PRKD3 23683 hgsc.bcm.edu 36 2 37397071 37397071 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005813 exon1 c.C101T p.T34M . . . DHX57 90957 hgsc.bcm.edu 36 2 38935771 38935771 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198963 exon8 c.G1837A p.V613I . . . CCDC88A 55704 hgsc.bcm.edu 36 2 55376478 55376478 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001135597 exon31 c.G5307A p.A1769A . . . PAPOLG 64895 hgsc.bcm.edu 36 2 60861362 60861362 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022894 exon10 c.G850A p.V284M . . . REL 5966 hgsc.bcm.edu 36 2 60972346 60972346 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002908 exon2 c.T35C p.I12T . . . TMEM17 200728 hgsc.bcm.edu 36 2 62583407 62583407 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198276 exon2 c.C127T p.L43L . . . PELI1 57162 hgsc.bcm.edu 36 2 64176798 64176798 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020651 exon6 c.C655T p.R219C . . . SNRNP27 11017 hgsc.bcm.edu 36 2 69977082 69977082 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006857 exon3 c.C166T p.R56X . . . DYSF 8291 hgsc.bcm.edu 36 2 71693974 71693974 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130982 exon41 c.G4432A p.D1478N . . . CYP26B1 56603 hgsc.bcm.edu 36 2 72224631 72224631 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019885 exon2 c.C424T p.R142C . . . REG3G 130120 hgsc.bcm.edu 36 2 79108910 79108910 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001008387 exon6 c.G528T p.X176Y . . . LRRTM1 347730 hgsc.bcm.edu 36 2 80383765 80383765 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178839 exon2 c.C691T p.R231C . . . ELMOD3 84173 hgsc.bcm.edu 36 2 85470803 85470803 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001135021 exon14 c.G847A p.V283M . . . VAMP5 10791 hgsc.bcm.edu 36 2 85672394 85672394 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006634 exon2 c.G39A p.A13A . . . FABP1 2168 hgsc.bcm.edu 36 2 88206849 88206849 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001443 exon2 c.G201T p.E67D . . . SNRNP200 23020 hgsc.bcm.edu 36 2 96328165 96328165 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014014 exon8 c.G885A p.T295T . . . AFF3 3899 hgsc.bcm.edu 36 2 99570118 99570118 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001025108 exon15 c.A2596G p.S866G . . . WDR33 55339 hgsc.bcm.edu 36 2 128180510 128180511 + Frame_Shift_Del DEL TG TG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TG TG TG - TG TG Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018383 exon22 c.3867_3868del p.1289_1290del . . . HOXD1 3231 hgsc.bcm.edu 36 2 176762813 176762814 + Frame_Shift_Del DEL CT CT - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CT CT . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024501 exon2 c.684_685del p.228_229del . . . HDAC4 9759 hgsc.bcm.edu 36 2 239689524 239689525 + Frame_Shift_Del DEL GA GA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 GA GA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006037 exon16 c.2102_2103del p.701_701del . . . FSHR 2492 hgsc.bcm.edu 36 2 49063769 49063770 + Frame_Shift_Del DEL CA CA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CA CA CA - CA CA Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181446 exon6 c.486_487del p.162_163del . . . UGP2 7360 hgsc.bcm.edu 36 2 63964719 63964722 + Frame_Shift_Del DEL TCAA TCAA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TCAA TCAA TCAA - TCAA TCAA Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001001521 exon5 c.530_533del p.177_178del . . . TBC1D23 55773 hgsc.bcm.edu 36 3 101522425 101522426 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001199198 exon18 c.1938_1939insA p.S646fs . . . GOLIM4 27333 hgsc.bcm.edu 36 3 169233224 169233225 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014498 exon9 c.954_955insC p.P318fs . . . FANCD2 2177 hgsc.bcm.edu 36 3 10078846 10078846 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033084 exon20 c.C1778T p.P593L . . . TATDN2 9797 hgsc.bcm.edu 36 3 10277106 10277106 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014760 exon3 c.G700A p.A234T . . . ATP2B2 491 hgsc.bcm.edu 36 3 10375558 10375558 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001683 exon11 c.C1818T p.R606R . . . SLC6A11 6538 hgsc.bcm.edu 36 3 10891711 10891711 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014229 exon6 c.G822A p.T274T . . . DZIP3 9666 hgsc.bcm.edu 36 3 109845866 109845866 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014648 exon14 c.A1307G p.Y436C . . . MORC1 27136 hgsc.bcm.edu 36 3 110206411 110206411 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014429 exon20 c.T2028C p.A676A . . . DPPA2 151871 hgsc.bcm.edu 36 3 110506206 110506206 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138815 exon7 c.C660T p.G220G . . . BTLA 151888 hgsc.bcm.edu 36 3 113671315 113671315 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_181780 exon4 c.G574A p.A192T . . . BOC 91653 hgsc.bcm.edu 36 3 114452268 114452268 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033254 exon4 c.G274A p.V92I . . . TIGIT 201633 hgsc.bcm.edu 36 3 115497372 115497372 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173799 exon2 c.T352C p.Y118H . . . GAP43 2596 hgsc.bcm.edu 36 3 116825239 116825239 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002045 exon1 c.A13G p.M5V . . . B4GALT4 8702 hgsc.bcm.edu 36 3 120420210 120420210 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003778 exon6 c.C774T p.G258G . . . C3orf1 51300 hgsc.bcm.edu 36 3 120705084 120705084 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016589 exon3 c.G376A p.A126T . . . GPR156 165829 hgsc.bcm.edu 36 3 121369137 121369137 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001168271 exon9 c.G1865A p.R622K . . . HCLS1 3059 hgsc.bcm.edu 36 3 122837289 122837289 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005335 exon9 c.C674T p.T225M . . . GOLGB1 2804 hgsc.bcm.edu 36 3 122897070 122897070 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004487 exon13 c.G4975A p.E1659K . . . CSTA 1475 hgsc.bcm.edu 36 3 123543001 123543001 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005213 exon3 c.T194C p.M65T . . . MYLK 4638 hgsc.bcm.edu 36 3 124934520 124934520 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_053025 exon11 c.G1429A p.A477T . . . TSEN2 80746 hgsc.bcm.edu 36 3 12535594 12535594 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025265 exon8 c.A997G p.T333A . . . NUP210 23225 hgsc.bcm.edu 36 3 13358295 13358295 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024923 exon23 c.A3181G p.T1061A . . . RBP1 5947 hgsc.bcm.edu 36 3 140740441 140740441 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130993 exon2 c.G310A p.E104K . . . PLS1 5357 hgsc.bcm.edu 36 3 143891326 143891326 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002670 exon10 c.C1158T p.I386I . . . PCOLCE2 26577 hgsc.bcm.edu 36 3 144022484 144022484 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013363 exon8 c.C1043T p.A348V . . . SLC6A6 6533 hgsc.bcm.edu 36 3 14498280 14498280 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003043 exon14 c.C1649T p.A550V . . . ZIC4 84107 hgsc.bcm.edu 36 3 148596564 148596564 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001168378 exon3 c.G603A p.M201I . . . MED12L 116931 hgsc.bcm.edu 36 3 152360347 152360347 + Silent SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_053002 exon7 c.T876A p.R292R . . . MBNL1 4154 hgsc.bcm.edu 36 3 153645844 153645844 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_207293 exon4 c.T633C p.I211I . . . DHX36 170506 hgsc.bcm.edu 36 3 155476655 155476655 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001114397 exon25 c.G2984A p.X995X . . . MME 4311 hgsc.bcm.edu 36 3 156284655 156284655 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000902 exon2 c.G5A p.G2D . . . PLCH1 23007 hgsc.bcm.edu 36 3 156683262 156683262 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130960 exon23 c.G3271A p.A1091T . . . PLCH1 23007 hgsc.bcm.edu 36 3 156697841 156697841 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130960 exon14 c.A1820G p.Y607C . . . MLF1 4291 hgsc.bcm.edu 36 3 159803406 159803406 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001195434 exon8 c.C655T p.R219X . . . PLD1 5337 hgsc.bcm.edu 36 3 172938496 172938496 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130081 exon2 c.C40T p.L14L . . . EIF2B5 8893 hgsc.bcm.edu 36 3 185341105 185341105 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003907 exon7 c.T1049C p.L350P . . . ABCF3 55324 hgsc.bcm.edu 36 3 185388834 185388834 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018358 exon7 c.C781T p.R261X . . . EIF4G1 1981 hgsc.bcm.edu 36 3 185535232 185535232 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182917 exon32 c.G4645A p.A1549T . . . TMEM41A 90407 hgsc.bcm.edu 36 3 186697444 186697444 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_080652 exon2 c.G139A p.D47N . . . MASP1 5648 hgsc.bcm.edu 36 3 188436471 188436471 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139125 exon11 c.G1882A p.A628T . . . BCL6 604 hgsc.bcm.edu 36 3 188927301 188927301 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130845 exon7 c.C1620A p.T540T . . . DLG1 1739 hgsc.bcm.edu 36 3 198292331 198292331 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004087 exon18 c.G1992A p.T664T . . . FYTTD1 84248 hgsc.bcm.edu 36 3 198988217 198988217 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001011537 exon8 c.G601T p.G201X . . . RARB 5915 hgsc.bcm.edu 36 3 25611101 25611101 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000965 exon7 c.C1078T p.R360X . . . STT3B 201595 hgsc.bcm.edu 36 3 31649622 31649622 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178862 exon15 c.A2379C p.K793N . . . OSBPL10 114884 hgsc.bcm.edu 36 3 31846617 31846617 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017784 exon4 c.C648T p.V216V . . . UBP1 7342 hgsc.bcm.edu 36 3 33428147 33428147 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001128161 exon6 c.C485T p.T162M . . . STAC 6769 hgsc.bcm.edu 36 3 36460052 36460052 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003149 exon2 c.C304A p.H102N . . . CHL1 10752 hgsc.bcm.edu 36 3 378486 378486 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006614 exon13 c.G1411A p.V471M . . . ACAA1 30 hgsc.bcm.edu 36 3 38142756 38142756 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001607 exon9 c.A898G p.I300V . . . ZNF620 253639 hgsc.bcm.edu 36 3 40533186 40533186 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_175888 exon5 c.G1097A p.C366Y . . . VIPR1 7433 hgsc.bcm.edu 36 3 42547291 42547291 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004624 exon7 c.C653T p.A218V . . . CDCP1 64866 hgsc.bcm.edu 36 3 45127145 45127145 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022842 exon4 c.A848G p.Y283C . . . SLC6A20 54716 hgsc.bcm.edu 36 3 45776448 45776448 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022405 exon9 c.G1423T p.V475L . . . CCR1 1230 hgsc.bcm.edu 36 3 46220312 46220312 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001295 exon2 c.T497C p.M166T . . . LTF 4057 hgsc.bcm.edu 36 3 46481354 46481354 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002343 exon1 c.T8C p.L3P . . . CSPG5 10675 hgsc.bcm.edu 36 3 47593368 47593368 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006574 exon2 c.C1152T p.G384G . . . DHX30 22907 hgsc.bcm.edu 36 3 47866156 47866156 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138615 exon21 c.C3224T p.T1075M . . . CDC25A 993 hgsc.bcm.edu 36 3 48175945 48175945 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001789 exon14 c.C1327T p.R443W . . . GRM2 2912 hgsc.bcm.edu 36 3 51724963 51724963 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001130063 exon2 c.G280A p.E94K . . . IQCF1 132141 hgsc.bcm.edu 36 3 51904150 51904150 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152397 exon4 c.G414A p.W138X . . . WDR51A 25886 hgsc.bcm.edu 36 3 52154967 52154967 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001161581 exon6 c.C500T p.A167V . . . NEK4 6787 hgsc.bcm.edu 36 3 52752451 52752451 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001193533 exon11 c.C1694A p.P565H . . . SFMBT1 51460 hgsc.bcm.edu 36 3 52929695 52929695 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001005158 exon13 c.C1270T p.P424S . . . CHDH 55349 hgsc.bcm.edu 36 3 53831695 53831695 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018397 exon4 c.G718A p.A240T . . . FLNB 2317 hgsc.bcm.edu 36 3 58124064 58124064 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001164317 exon44 c.G7258A p.A2420T . . . ACOX2 8309 hgsc.bcm.edu 36 3 58485335 58485335 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003500 exon11 c.C1384A p.P462T . . . C3orf67 200844 hgsc.bcm.edu 36 3 58874581 58874581 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198463 exon6 c.A68G p.K23R . . . ATXN7 6314 hgsc.bcm.edu 36 3 63956626 63956626 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001177387 exon11 c.T2088C p.S696S . . . ASTE1 28990 hgsc.bcm.edu 36 3 132225912 132225913 + Frame_Shift_Del DEL AA AA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 AA AA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014065 exon3 c.928_929del p.310_310del . . . GAR1 54433 hgsc.bcm.edu 36 4 110964629 110964629 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032993 exon6 c.G631T p.G211C . . . NEUROG2 63973 hgsc.bcm.edu 36 4 113655364 113655364 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024019 exon2 c.G717A p.S239S . . . NDST3 9348 hgsc.bcm.edu 36 4 119194542 119194542 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004784 exon2 c.A29G p.H10R . . . EXOSC9 5393 hgsc.bcm.edu 36 4 122945359 122945359 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001034194 exon5 c.A517G p.T173A . . . FAT4 79633 hgsc.bcm.edu 36 4 126591992 126591992 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024582 exon9 c.G10371A p.P3457P . . . MFSD8 256471 hgsc.bcm.edu 36 4 129105732 129105732 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152778 exon2 c.G7T p.G3C . . . BOD1L 259282 hgsc.bcm.edu 36 4 13210935 13210935 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_148894 exon10 c.T6687C p.A2229A . . . PCDH10 57575 hgsc.bcm.edu 36 4 134291164 134291164 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032961 exon1 c.G419A p.R140H . . . PCDH10 57575 hgsc.bcm.edu 36 4 134292174 134292174 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032961 exon1 c.G1429A p.V477M . . . PCDH10 57575 hgsc.bcm.edu 36 4 134293154 134293154 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032961 exon1 c.G2409T p.P803P . . . PCDH18 54510 hgsc.bcm.edu 36 4 138662219 138662219 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019035 exon4 c.C2822T p.S941F . . . PCDH18 54510 hgsc.bcm.edu 36 4 138670505 138670505 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019035 exon1 c.G2188A p.D730N . . . OTUD4 54726 hgsc.bcm.edu 36 4 146296191 146296191 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001102653 exon9 c.T593A p.I198N . . . ZNF827 152485 hgsc.bcm.edu 36 4 146905601 146905601 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178835 exon13 c.C3219T p.T1073T . . . LRBA 987 hgsc.bcm.edu 36 4 151985310 151985310 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006726 exon27 c.G4411A p.A1471T . . . LRBA 987 hgsc.bcm.edu 36 4 152061852 152061852 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006726 exon5 c.C593A p.P198H . . . TIGD4 201798 hgsc.bcm.edu 36 4 153910298 153910298 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145720 exon2 c.G1309A p.D437N . . . TKTL2 84076 hgsc.bcm.edu 36 4 164613049 164613049 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032136 exon1 c.G1288A p.V430I . . . DDX60 55601 hgsc.bcm.edu 36 4 169425685 169425685 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017631 exon21 c.C2811A p.Y937X . . . DCTD 1635 hgsc.bcm.edu 36 4 184073640 184073640 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001921 exon2 c.T76A p.S26T . . . C4orf41 60684 hgsc.bcm.edu 36 4 184865018 184865018 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_199053 exon28 c.C3120T p.T1040T . . . KLKB1 3818 hgsc.bcm.edu 36 4 187416254 187416254 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000892 exon15 c.G1811A p.R604H . . . WHSC1 7468 hgsc.bcm.edu 36 4 1889865 1889865 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_133331 exon6 c.C1127A p.S376Y . . . ZFP42 132625 hgsc.bcm.edu 36 4 189161085 189161085 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_174900 exon4 c.A130C p.S44R . . . PI4K2B 55300 hgsc.bcm.edu 36 4 24887870 24887870 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018323 exon10 c.C1409T p.T470I . . . C4orf8 8603 hgsc.bcm.edu 36 4 2666513 2666513 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003704 exon15 c.C2262T p.Y754Y . . . NOP14 8602 hgsc.bcm.edu 36 4 2925054 2925054 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003703 exon5 c.C729T p.D243D . . . RGS12 6002 hgsc.bcm.edu 36 4 3287854 3287854 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002926 exon2 c.G159T p.A53A . . . ARAP2 116984 hgsc.bcm.edu 36 4 35907334 35907334 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015230 exon2 c.G170A p.R57H . . . WDR21B 285429 hgsc.bcm.edu 36 4 41678780 41678780 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001029955 exon1 c.G214A p.D72N . . . LYAR 55646 hgsc.bcm.edu 36 4 4327129 4327129 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145725 exon7 c.C698T p.A233V . . . CRMP1 1400 hgsc.bcm.edu 36 4 5878184 5878184 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001313 exon13 c.C1565T p.S522L . . . TMPRSS11D 9407 hgsc.bcm.edu 36 4 68390900 68390900 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004262 exon4 c.G288A p.Q96Q . . . UGT2B17 7367 hgsc.bcm.edu 36 4 69086141 69086141 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001077 exon6 c.T1390C p.W464R . . . C4orf35 85438 hgsc.bcm.edu 36 4 71236225 71236225 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033122 exon1 c.G880T p.G294X . . . ADAMTS3 9508 hgsc.bcm.edu 36 4 73380310 73380310 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014243 exon19 c.G2648A p.R883H ADAMTS3,lung,NS,Substitution - Missense,0 . . ANKRD17 26057 hgsc.bcm.edu 36 4 74176074 74176074 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198889 exon28 c.C5382T p.S1794S . . . ANKRD17 26057 hgsc.bcm.edu 36 4 74203412 74203412 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198889 exon21 c.C3292T p.R1098C . . . ANKRD17 26057 hgsc.bcm.edu 36 4 74224257 74224257 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032217 exon15 c.G2940A p.L980L . . . CDKL2 8999 hgsc.bcm.edu 36 4 76770033 76770033 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003948 exon2 c.T164C p.L55P . . . SEPT11 55752 hgsc.bcm.edu 36 4 78155183 78155183 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018243 exon5 c.G676A p.A226T . . . SH3TC1 54436 hgsc.bcm.edu 36 4 8293511 8293511 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018986 exon18 c.C3940T p.R1314C . . . LIN54 132660 hgsc.bcm.edu 36 4 84119163 84119163 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001115008 exon3 c.G42A p.T14T . . . WDFY3 23001 hgsc.bcm.edu 36 4 85891820 85891820 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014991 exon36 c.A5813T p.N1938I . . . SPARCL1 8404 hgsc.bcm.edu 36 4 88634300 88634300 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001128310 exon5 c.A676G p.R226G . . . FAM13A 10144 hgsc.bcm.edu 36 4 89921519 89921519 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014883 exon11 c.T1278C p.L426L . . . C4orf50 389197 hgsc.bcm.edu 36 4 6012039 6012039 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 . . . . . . . TCERG1 10915 hgsc.bcm.edu 36 5 145839838 145839839 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001040006 exon11 c.1811_1812insA p.A604fs . . . HCN1 348980 hgsc.bcm.edu 36 5 45339541 45339542 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021072 exon6 c.1535_1536insA p.M512fs . . . SLCO4C1 353189 hgsc.bcm.edu 36 5 101602904 101602904 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_180991 exon12 c.C1964T p.A655V . . . PJA2 9867 hgsc.bcm.edu 36 5 108742156 108742156 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014819 exon4 c.G931A p.E311K . . . CTNND2 1501 hgsc.bcm.edu 36 5 11041274 11041274 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001332 exon20 c.A3292G p.T1098A . . . WDR36 134430 hgsc.bcm.edu 36 5 110476672 110476672 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139281 exon16 c.G1885A p.A629T . . . APC 324 hgsc.bcm.edu 36 5 112192485 112192485 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001127511 exon12 c.C1606T p.R536X APC,ovary,NS,Substitution - Nonsense,0 . . SNCAIP 9627 hgsc.bcm.edu 36 5 121786733 121786733 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005460 exon4 c.T402C p.S134S . . . ADAMTS19 171019 hgsc.bcm.edu 36 5 128984327 128984327 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_133638 exon9 c.G1578T p.K526N . . . SLC6A18 348932 hgsc.bcm.edu 36 5 1297437 1297437 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182632 exon10 c.T1445C p.M482T . . . ACSL6 23305 hgsc.bcm.edu 36 5 131354448 131354448 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001009185 exon3 c.T382C p.S128P . . . SPOCK1 6695 hgsc.bcm.edu 36 5 136862046 136862046 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004598 exon2 c.A101G p.N34S . . . SLC23A1 9963 hgsc.bcm.edu 36 5 138743971 138743971 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005847 exon6 c.G472A p.G158S . . . SLC35A4 113829 hgsc.bcm.edu 36 5 139927230 139927230 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_080670 exon3 c.G292A p.A98T . . . PCDHA10 56139 hgsc.bcm.edu 36 5 140216983 140216983 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031860 exon1 c.C1166T p.T389M . . . PCDHA10 56139 hgsc.bcm.edu 36 5 140217010 140217010 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031860 exon1 c.C1193T p.S398F . . . PCDHGA2 56113 hgsc.bcm.edu 36 5 140699866 140699866 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032009 exon1 c.A1144G p.T382A . . . PCDHGC3 5098 hgsc.bcm.edu 36 5 140835891 140835891 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032402 exon1 c.C24T p.S8S . . . PCDHGC3 5098 hgsc.bcm.edu 36 5 140836067 140836067 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032402 exon1 c.G200T p.R67L . . . PCDHGC3 5098 hgsc.bcm.edu 36 5 140836511 140836511 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032402 exon1 c.C644T p.T215M . . . AFAP1L1 134265 hgsc.bcm.edu 36 5 148659316 148659316 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152406 exon2 c.A68T p.H23L . . . AFAP1L1 134265 hgsc.bcm.edu 36 5 148666099 148666099 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152406 exon6 c.C474T p.Y158Y . . . PCYOX1L 78991 hgsc.bcm.edu 36 5 148727187 148727187 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024028 exon5 c.G754A p.G252S . . . SLC6A3 6531 hgsc.bcm.edu 36 5 1496058 1496058 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001044 exon2 c.G255T p.R85R . . . MYOZ3 91977 hgsc.bcm.edu 36 5 150030365 150030365 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001122853 exon3 c.C188A p.T63N . . . FAT2 2196 hgsc.bcm.edu 36 5 150872022 150872022 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001447 exon20 c.C11802T p.G3934G . . . C5orf40 408263 hgsc.bcm.edu 36 5 156702598 156702598 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001001343 exon2 c.G525A p.L175L . . . SOX30 11063 hgsc.bcm.edu 36 5 156997829 156997829 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178424 exon4 c.T1867C p.Y623H . . . EBF1 1879 hgsc.bcm.edu 36 5 158456615 158456615 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024007 exon2 c.G236A p.G79D . . . GABRA6 2559 hgsc.bcm.edu 36 5 161061303 161061303 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000811 exon9 c.C1308T p.Y436Y . . . DOCK2 1794 hgsc.bcm.edu 36 5 169409964 169409964 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004946 exon41 c.A4198C p.N1400H . . . FOXI1 2299 hgsc.bcm.edu 36 5 169468053 169468053 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144769 exon2 c.G712A p.G238S . . . ADAMTS2 9509 hgsc.bcm.edu 36 5 178487589 178487589 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014244 exon17 c.C2594T p.P865L . . . MAML1 9794 hgsc.bcm.edu 36 5 179126229 179126229 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014757 exon2 c.G1612A p.A538T . . . PDZD2 23037 hgsc.bcm.edu 36 5 32123335 32123335 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_178140 exon19 c.G4024T p.G1342X . . . ZFR 51663 hgsc.bcm.edu 36 5 32426300 32426300 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016107 exon12 c.A1980G p.R660R . . . ADAMTS12 81792 hgsc.bcm.edu 36 5 33612844 33612844 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_030955 exon19 c.A3044C p.N1015T . . . SLC45A2 51151 hgsc.bcm.edu 36 5 34020131 34020131 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001012509 exon1 c.C315T p.Y105Y . . . RAI14 26064 hgsc.bcm.edu 36 5 34793458 34793458 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145522 exon3 c.C165T p.T55T . . . SLC1A3 6507 hgsc.bcm.edu 36 5 36721994 36721994 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001166695 exon8 c.C1360T p.R454X . . . LIFR 3977 hgsc.bcm.edu 36 5 38517719 38517719 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001127671 exon20 c.A3029T p.N1010I . . . LIFR 3977 hgsc.bcm.edu 36 5 38559322 38559322 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001127671 exon5 c.G517A p.E173K . . . HSPB3 8988 hgsc.bcm.edu 36 5 53787481 53787481 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006308 exon1 c.T105C p.Y35Y . . . GZMA 3001 hgsc.bcm.edu 36 5 54439779 54439779 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006144 exon4 c.A427G p.K143E . . . SKIV2L2 23517 hgsc.bcm.edu 36 5 54675023 54675023 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015360 exon8 c.T889C p.C297R . . . ACTBL2 345651 hgsc.bcm.edu 36 5 56813699 56813699 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001017992 exon1 c.G593A p.G198D . . . NSUN2 54888 hgsc.bcm.edu 36 5 6653064 6653064 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017755 exon19 c.C2279T p.P760L . . . MCCC2 64087 hgsc.bcm.edu 36 5 70934168 70934168 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022132 exon5 c.C463T p.R155W . . . MAP1B 4131 hgsc.bcm.edu 36 5 71529260 71529260 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005909 exon5 c.A4322G p.Q1441R . . . ZNF366 167465 hgsc.bcm.edu 36 5 71792758 71792758 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152625 exon2 c.G322A p.G108S . . . ADCY2 108 hgsc.bcm.edu 36 5 7679425 7679425 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020546 exon4 c.A716G p.Q239R . . . BRD9 65980 hgsc.bcm.edu 36 5 929273 929273 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_023924 exon12 c.C1326T p.D442D . . . NR2F1 7025 hgsc.bcm.edu 36 5 92946753 92946753 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005654 exon1 c.G268A p.G90R . . . LNPEP 4012 hgsc.bcm.edu 36 5 96388166 96388166 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005575 exon16 c.A2813G p.H938R . . . TULP4 56995 hgsc.bcm.edu 36 6 158820944 158820945 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - C - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020245 exon7 c.1200_1201insC p.L400fs . . . TAPBP 6892 hgsc.bcm.edu 36 6 33381050 33381051 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003190 exon4 c.562_563insC p.T188fs . . . USP45 85015 hgsc.bcm.edu 36 6 100043322 100043322 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001080481 exon6 c.A574T p.I192F . . . PRDM1 639 hgsc.bcm.edu 36 6 106659804 106659804 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001198 exon5 c.C1076T p.T359M . . . AIM1 202 hgsc.bcm.edu 36 6 107115463 107115463 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001624 exon17 c.G4724A p.R1575H . . . PDSS2 57107 hgsc.bcm.edu 36 6 107638467 107638467 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020381 exon6 c.A877G p.I293V . . . NCOA7 135112 hgsc.bcm.edu 36 6 126278186 126278186 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001199620 exon13 c.A2111G p.Y704C . . . LAMA2 3908 hgsc.bcm.edu 36 6 129663710 129663710 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001079823 exon22 c.G3174T p.K1058N . . . LAMA2 3908 hgsc.bcm.edu 36 6 129764126 129764126 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001079823 exon38 c.A5510G p.D1837G . . . ARHGAP18 93663 hgsc.bcm.edu 36 6 129963634 129963634 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033515 exon11 c.T1418G p.M473R . . . SAMD3 154075 hgsc.bcm.edu 36 6 130538719 130538719 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001017373 exon8 c.C782T p.A261V . . . TMEM200A 114801 hgsc.bcm.edu 36 6 130804098 130804098 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052913 exon2 c.A838T p.I280F . . . TBC1D7 51256 hgsc.bcm.edu 36 6 13435050 13435050 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001143965 exon2 c.T60C p.R20R . . . NMBR 4829 hgsc.bcm.edu 36 6 142451183 142451183 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002511 exon1 c.G306A p.S102S . . . GRM1 2911 hgsc.bcm.edu 36 6 146392617 146392617 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001114329 exon2 c.G271A p.A91T . . . RAB32 10981 hgsc.bcm.edu 36 6 146906864 146906864 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006834 exon1 c.G164A p.R55Q . . . RAET1G 353091 hgsc.bcm.edu 36 6 150282104 150282104 + Silent SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001001788 exon3 c.A399T p.G133G . . . AKAP12 9590 hgsc.bcm.edu 36 6 151714228 151714228 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005100 exon4 c.G3009A p.V1003V . . . JARID2 3720 hgsc.bcm.edu 36 6 15518510 15518510 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004973 exon3 c.C258A p.S86S . . . ARID1B 57492 hgsc.bcm.edu 36 6 157570287 157570287 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017519 exon19 c.G6281A p.R2094H . . . THBS2 7058 hgsc.bcm.edu 36 6 169390683 169390683 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003247 exon4 c.G363A p.A121A . . . KIAA0319 9856 hgsc.bcm.edu 36 6 24664844 24664844 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001168377 exon18 c.C2827T p.R943C . . . HIST1H3B 8358 hgsc.bcm.edu 36 6 26139955 26139955 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003537 exon1 c.T313C p.F105L . . . POU5F1 5460 hgsc.bcm.edu 36 6 31246146 31246146 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002701 exon1 c.G231A p.G77G . . . HLA-DRA 3122 hgsc.bcm.edu 36 6 32519520 32519520 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_019111 exon4 c.C620T p.A207V . . . GRM4 2914 hgsc.bcm.edu 36 6 34098589 34098589 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000841 exon10 c.A2726T p.N909I . . . DNAH8 1769 hgsc.bcm.edu 36 6 39102300 39102300 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001371 exon90 c.G13064A p.G4355D . . . MOCS1 4337 hgsc.bcm.edu 36 6 39987998 39987998 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001075098 exon8 c.T969C p.D323D . . . NFYA 4800 hgsc.bcm.edu 36 6 41170175 41170175 + Silent SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002505 exon9 c.A951T p.R317R . . . PTK7 5754 hgsc.bcm.edu 36 6 43217676 43217676 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152880 exon11 c.C1678G p.R560G . . . ABCC10 89845 hgsc.bcm.edu 36 6 43520858 43520858 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001198934 exon14 c.T2858C p.L953P . . . MEP1A 4224 hgsc.bcm.edu 36 6 46901137 46901137 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005588 exon8 c.C726T p.R242R . . . TFAP2D 83741 hgsc.bcm.edu 36 6 50790862 50790862 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_172238 exon2 c.C114T p.V38V . . . LRRC1 55227 hgsc.bcm.edu 36 6 53768064 53768064 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018214 exon1 c.C51T p.I17I . . . EYS 346007 hgsc.bcm.edu 36 6 66257209 66257209 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198283 exon4 c.A861G p.S287S . . . FILIP1 27145 hgsc.bcm.edu 36 6 76120014 76120014 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015687 exon4 c.G590T p.S197I . . . FAM46A 55603 hgsc.bcm.edu 36 6 82516541 82516541 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017633 exon3 c.G919A p.A307T . . . PRSS35 167681 hgsc.bcm.edu 36 6 84290384 84290384 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001170423 exon3 c.C505A p.H169N . . . MDN1 23195 hgsc.bcm.edu 36 6 90561135 90561135 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014611 exon3 c.C436T p.R146W . . . FUT9 10690 hgsc.bcm.edu 36 6 96758354 96758354 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006581 exon3 c.C602T p.A201V . . . KIAA0776 23376 hgsc.bcm.edu 36 6 97092011 97092011 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015323 exon9 c.A843G p.V281V . . . KLHL32 114792 hgsc.bcm.edu 36 6 97530671 97530671 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052904 exon3 c.A101G p.Q34R . . . C6orf167 253714 hgsc.bcm.edu 36 6 97727685 97727685 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198468 exon19 c.G2814A p.G938G . . . C6orf168 84553 hgsc.bcm.edu 36 6 99835986 99835986 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032511 exon6 c.C1005T p.H335H . . . MAP3K4 4216 hgsc.bcm.edu 36 6 161390650 161390651 + Frame_Shift_Del DEL GG GG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 GG GG . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006724 exon3 c.1356_1357del p.452_453del . . . FBXL13 222235 hgsc.bcm.edu 36 7 102456378 102456379 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001111038 exon4 c.122_123insA p.M41fs . . . DBF4 10926 hgsc.bcm.edu 36 7 87363749 87363750 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006716 exon7 c.622_623insA p.Q208fs . . . IMMP2L 83943 hgsc.bcm.edu 36 7 110948643 110948643 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032549 exon2 c.G97T p.V33F . . . IMMP2L 83943 hgsc.bcm.edu 36 7 110948713 110948713 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_032549 exon2 c.A27T p.K9N . . . SND1 27044 hgsc.bcm.edu 36 7 127513062 127513062 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014390 exon20 c.C2298T p.Y766Y . . . ZC3HC1 51530 hgsc.bcm.edu 36 7 129449434 129449434 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016478 exon9 c.G1401A p.A467A . . . TBXAS1 6916 hgsc.bcm.edu 36 7 139257510 139257510 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001061 exon4 c.G257A p.R86Q TBXAS1,breast,NS,Substitution - Missense,+1 . . BRAF 673 hgsc.bcm.edu 36 7 140099605 140099605 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004333 exon15 c.T1799A p.V600E BRAF,pituitary,NS,Substitution - Missense,0 . . TAS2R3 50831 hgsc.bcm.edu 36 7 141111021 141111021 + Silent SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016943 exon1 c.C594A p.A198A . . . TRPV6 55503 hgsc.bcm.edu 36 7 142282486 142282486 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018646 exon11 c.C1332A p.L444L . . . ARHGEF5 7984 hgsc.bcm.edu 36 7 143708039 143708039 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005435 exon15 c.G4751T p.R1584L . . . CNTNAP2 26047 hgsc.bcm.edu 36 7 146167867 146167867 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014141 exon3 c.C340T p.R114W . . . PTPRN2 5799 hgsc.bcm.edu 36 7 157690654 157690654 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_130843 exon4 c.T350C p.L117P . . . KLHL7 55975 hgsc.bcm.edu 36 7 23112172 23112172 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001031710 exon1 c.T2G p.M1R . . . MPP6 51678 hgsc.bcm.edu 36 7 24669774 24669774 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016447 exon7 c.A692G p.D231G . . . OSBPL3 26031 hgsc.bcm.edu 36 7 24840762 24840762 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145321 exon14 c.G1506T p.K502N . . . HOXA2 3199 hgsc.bcm.edu 36 7 27107329 27107329 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006735 exon2 c.G672T p.E224D . . . NEUROD6 63974 hgsc.bcm.edu 36 7 31344925 31344925 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022728 exon2 c.C483T p.F161F . . . PDE1C 5137 hgsc.bcm.edu 36 7 31854116 31854116 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001191056 exon9 c.A971T p.D324V . . . GLI3 2737 hgsc.bcm.edu 36 7 41978496 41978496 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000168 exon13 c.C2068A p.L690I . . . GLI3 2737 hgsc.bcm.edu 36 7 42154402 42154402 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000168 exon3 c.C315T p.R105R . . . AEBP1 165 hgsc.bcm.edu 36 7 44119859 44119859 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001129 exon21 c.G2951A p.R984H . . . TMED4 222068 hgsc.bcm.edu 36 7 44587880 44587880 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182547 exon2 c.C228T p.G76G . . . FIGNL1 63979 hgsc.bcm.edu 36 7 50480618 50480618 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001042762 exon4 c.G1862A p.R621H . . . CYTH3 9265 hgsc.bcm.edu 36 7 6171114 6171114 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004227 exon13 c.G1186A p.A396T . . . TBL2 26608 hgsc.bcm.edu 36 7 72623573 72623573 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012453 exon6 c.A760G p.K254E . . . WBSCR22 114049 hgsc.bcm.edu 36 7 72738906 72738906 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017528 exon3 c.C91T p.R31W . . . SEMA3A 10371 hgsc.bcm.edu 36 7 83513693 83513693 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006080 exon6 c.G550A p.G184R . . . SAMD9 54809 hgsc.bcm.edu 36 7 92569552 92569552 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001193307 exon2 c.A3795C p.K1265N . . . COL1A2 1278 hgsc.bcm.edu 36 7 93888302 93888302 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000089 exon38 c.G2341T p.G781C . . . NPTX2 4885 hgsc.bcm.edu 36 7 98095811 98095811 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002523 exon5 c.C1230T p.V410V . . . ZKSCAN1 7586 hgsc.bcm.edu 36 7 99469514 99469514 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003439 exon6 c.A1450G p.T484A . . . MCM7 4176 hgsc.bcm.edu 36 7 99533213 99533213 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182776 exon8 c.C549T p.V183V . . . GAL3ST4 79690 hgsc.bcm.edu 36 7 99595991 99595991 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024637 exon4 c.C957T p.C319C . . . C7orf25 79020 hgsc.bcm.edu 36 7 42916048 42916049 + Frame_Shift_Del DEL CT CT - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CT CT CT - CT CT Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024054 exon2 c.976_977del p.326_326del . . . CLIP2 7461 hgsc.bcm.edu 36 7 73441492 73441494 + In_Frame_Del DEL TCC TCC - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TCC TCC TCC - TCC TCC Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_003388 exon13 c.2687_2689del p.896_897del . . . LEPROTL1 23484 hgsc.bcm.edu 36 8 30082810 30082811 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015344 exon4 c.286_287insG p.W96fs . . . SPAG11B 10407 hgsc.bcm.edu 36 8 7306345 7306346 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_058203 exon3 c.336_337insT p.L112fs . . . AZIN1 51582 hgsc.bcm.edu 36 8 103921121 103921121 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015878 exon5 c.G209A p.C70Y . . . LRP12 29967 hgsc.bcm.edu 36 8 105572175 105572175 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_013437 exon7 c.C2482T p.R828C . . . CSMD3 114788 hgsc.bcm.edu 36 8 113377382 113377382 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_198123 exon54 c.G8470A p.V2824M . . . NEIL2 252969 hgsc.bcm.edu 36 8 11681164 11681164 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001135748 exon5 c.G624A p.E208E . . . NDRG1 10397 hgsc.bcm.edu 36 8 134343504 134343504 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001135242 exon5 c.C294A p.G98G . . . KHDRBS3 10656 hgsc.bcm.edu 36 8 136630317 136630317 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006558 exon4 c.C463A p.L155I . . . DENND3 22898 hgsc.bcm.edu 36 8 142217362 142217362 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014957 exon3 c.G205A p.D69N . . . SGCZ 137868 hgsc.bcm.edu 36 8 14456712 14456712 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_139167 exon2 c.G134A p.R45Q . . . ZNF596 169270 hgsc.bcm.edu 36 8 185559 185559 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001042416 exon6 c.C712A p.L238I . . . BMP1 649 hgsc.bcm.edu 36 8 22091396 22091396 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006129 exon6 c.G817A p.A273T . . . PIWIL2 55124 hgsc.bcm.edu 36 8 22221475 22221475 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018068 exon14 c.G1630A p.A544T . . . PIWIL2 55124 hgsc.bcm.edu 36 8 22229720 22229720 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_018068 exon19 c.C2226T p.I742I . . . KIAA1967 57805 hgsc.bcm.edu 36 8 22528980 22528980 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021174 exon12 c.A1303C p.T435P . . . DOCK5 80005 hgsc.bcm.edu 36 8 25157163 25157163 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024940 exon2 c.A100G p.T34A . . . CLU 1191 hgsc.bcm.edu 36 8 27523976 27523976 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001171138 exon2 c.G63A p.G21G . . . SCARA3 51435 hgsc.bcm.edu 36 8 27564968 27564968 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182826 exon3 c.G131A p.R44H . . . FZD3 7976 hgsc.bcm.edu 36 8 28441304 28441304 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145866 exon4 c.G1108A p.A370T . . . TEX15 56154 hgsc.bcm.edu 36 8 30824227 30824227 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_031271 exon1 c.G1849A p.D617N . . . C8orf41 80185 hgsc.bcm.edu 36 8 33489080 33489080 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025115 exon1 c.T594C p.D198D . . . RAB11FIP1 80223 hgsc.bcm.edu 36 8 37851478 37851478 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025151 exon3 c.T1335C p.D445D . . . ADRB3 155 hgsc.bcm.edu 36 8 37942095 37942095 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000025 exon1 c.G1050A p.P350P . . . ZMAT4 79698 hgsc.bcm.edu 36 8 40802305 40802305 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024645 exon2 c.C48A p.C16X . . . ANK1 286 hgsc.bcm.edu 36 8 41710652 41710652 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020475 exon3 c.A222G p.T74T . . . SLC20A2 6575 hgsc.bcm.edu 36 8 42413961 42413961 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006749 exon8 c.C1226T p.A409V . . . MCM4 4173 hgsc.bcm.edu 36 8 49049998 49049998 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_182746 exon15 c.G2288A p.R763H . . . RB1CC1 9821 hgsc.bcm.edu 36 8 53751525 53751525 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001083617 exon6 c.A529C p.N177H . . . TOX 9760 hgsc.bcm.edu 36 8 59890734 59890734 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014729 exon7 c.A1109G p.Y370C . . . SLC26A7 115111 hgsc.bcm.edu 36 8 92421920 92421920 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_134266 exon8 c.G991A p.A331T . . . INTS8 55656 hgsc.bcm.edu 36 8 95918005 95918005 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017864 exon7 c.A831T p.K277N . . . NIPAL2 79815 hgsc.bcm.edu 36 8 99286543 99286543 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024759 exon7 c.A763G p.M255V . . . ANGPTL2 23452 hgsc.bcm.edu 36 9 128910157 128910158 + In_Frame_Ins INS - - TCC novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_012098 exon2 c.675_676insGGA p.Y225delinsX . . . TGFBR1 7046 hgsc.bcm.edu 36 9 100940076 100940076 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004612 exon4 c.C689T p.A230V . . . TEX10 54881 hgsc.bcm.edu 36 9 102131325 102131325 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017746 exon7 c.C1543A p.L515I . . . ABCA1 19 hgsc.bcm.edu 36 9 106596605 106596605 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005502 exon40 c.A5390C p.N1797T . . . ZNF462 58499 hgsc.bcm.edu 36 9 108727004 108727004 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021224 exon3 c.A990G p.R330R . . . PTPN3 5774 hgsc.bcm.edu 36 9 111239001 111239001 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002829 exon9 c.G658C p.E220Q . . . LPAR1 1902 hgsc.bcm.edu 36 9 112743843 112743843 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001401 exon3 c.C472T p.R158W . . . C9orf84 158401 hgsc.bcm.edu 36 9 113543657 113543657 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173521 exon9 c.C902T p.A301V . . . KIAA1958 158405 hgsc.bcm.edu 36 9 114461479 114461479 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_133465 exon4 c.G1460A p.R487H . . . PRPF4 9128 hgsc.bcm.edu 36 9 115090321 115090321 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004697 exon10 c.G981A p.A327A . . . RGS3 5998 hgsc.bcm.edu 36 9 115286283 115286283 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_144488 exon7 c.G570A p.T190T . . . ASTN2 23245 hgsc.bcm.edu 36 9 119016789 119016789 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014010 exon3 c.C684T p.Y228Y . . . TLR4 7099 hgsc.bcm.edu 36 9 119516237 119516237 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_138554 exon3 c.T2010C p.G670G . . . TTLL11 158135 hgsc.bcm.edu 36 9 123791512 123791512 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001139442 exon4 c.G1322T p.S441I . . . LHX6 26468 hgsc.bcm.edu 36 9 124019169 124019169 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_199160 exon5 c.C681T p.N227N . . . OR1L8 138881 hgsc.bcm.edu 36 9 124370475 124370475 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001004454 exon1 c.G103A p.V35M . . . TYRP1 7306 hgsc.bcm.edu 36 9 12699024 12699024 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000550 exon8 c.G1456A p.A486T . . . ST6GALNAC4 27090 hgsc.bcm.edu 36 9 129714369 129714369 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_175039 exon4 c.C610T p.R204W . . . CRAT 1384 hgsc.bcm.edu 36 9 130900349 130900349 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000755 exon10 c.G1328T p.R443M . . . SETX 23064 hgsc.bcm.edu 36 9 134129631 134129631 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015046 exon26 c.C7850T p.T2617M . . . TSC1 7248 hgsc.bcm.edu 36 9 134788643 134788643 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001162426 exon6 c.C421T p.P141S . . . RALGDS 5900 hgsc.bcm.edu 36 9 134974906 134974906 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006266 exon4 c.C512T p.T171M . . . REXO4 57109 hgsc.bcm.edu 36 9 135267788 135267788 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020385 exon3 c.C647T p.A216V . . . COL5A1 1289 hgsc.bcm.edu 36 9 136798138 136798138 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000093 exon22 c.C2106T p.D702D . . . OLFM1 10439 hgsc.bcm.edu 36 9 137151640 137151640 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014279 exon6 c.A1199C p.Y400S . . . MRPS2 51116 hgsc.bcm.edu 36 9 137535237 137535237 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_016034 exon4 c.C328T p.R110C . . . BNC2 54796 hgsc.bcm.edu 36 9 16425607 16425607 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017637 exon6 c.T2585A p.V862D . . . BNC2 54796 hgsc.bcm.edu 36 9 16426678 16426678 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017637 exon6 c.A1514G p.N505S . . . ADAMTSL1 92949 hgsc.bcm.edu 36 9 18523263 18523263 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_052866 exon3 c.T210C p.N70N . . . FAM154A 158297 hgsc.bcm.edu 36 9 18918273 18918273 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_153707 exon4 c.C1202A p.P401H . . . DENND4C 55667 hgsc.bcm.edu 36 9 19318048 19318048 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017925 exon12 c.T1433C p.L478P . . . ACO1 48 hgsc.bcm.edu 36 9 32439014 32439014 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002197 exon20 c.G2491T p.G831W . . . FANCG 2189 hgsc.bcm.edu 36 9 35065074 35065074 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004629 exon12 c.G1486A p.A496T . . . KIAA1539 80256 hgsc.bcm.edu 36 9 35095807 35095807 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_025182 exon8 c.C1335A p.T445T . . . RUSC2 9853 hgsc.bcm.edu 36 9 35550334 35550334 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014806 exon10 c.G3697T p.G1233C . . . TESK1 7016 hgsc.bcm.edu 36 9 35597950 35597950 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006285 exon7 c.T737C p.V246A . . . SIT1 27240 hgsc.bcm.edu 36 9 35640554 35640554 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014450 exon2 c.G181A p.A61T . . . TPM2 7169 hgsc.bcm.edu 36 9 35675704 35675704 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_213674 exon3 c.G314A p.R105H . . . GBA2 57704 hgsc.bcm.edu 36 9 35729670 35729670 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_020944 exon9 c.C1537A p.L513I . . . GLIS3 169792 hgsc.bcm.edu 36 9 4107769 4107769 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_152629 exon3 c.C1244T p.T415M . . . ERMP1 79956 hgsc.bcm.edu 36 9 5777162 5777162 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024896 exon15 c.C2697T p.Y899Y . . . ERMP1 79956 hgsc.bcm.edu 36 9 5815110 5815110 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_024896 exon3 c.T750C p.A250A . . . KANK1 23189 hgsc.bcm.edu 36 9 734505 734505 + Silent SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_153186 exon10 c.G3438A p.A1146A . . . PSAT1 29968 hgsc.bcm.edu 36 9 80109518 80109518 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_058179 exon4 c.G239A p.C80Y . . . HNRNPK 3190 hgsc.bcm.edu 36 9 85779320 85779320 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002140 exon7 c.T262A p.L88M . . . AGTPBP1 23287 hgsc.bcm.edu 36 9 87397309 87397309 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015239 exon19 c.T2434C p.Y812H . . . CKS2 1164 hgsc.bcm.edu 36 9 91119965 91119965 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001827 exon2 c.A120C p.E40D . . . SEMA4D 10507 hgsc.bcm.edu 36 9 91183597 91183597 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006378 exon18 c.C2431A p.L811M . . . PHF2 5253 hgsc.bcm.edu 36 9 95438610 95438610 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005392 exon3 c.G281A p.R94Q . . . ZNF510 22869 hgsc.bcm.edu 36 9 98561750 98561750 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_014930 exon6 c.C1183T p.R395X . . . C9orf84 158401 hgsc.bcm.edu 36 9 113494058 113494061 + Frame_Shift_Del DEL TTTA TTTA - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 TTTA TTTA . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_173521 exon25 c.3825_3828del p.1275_1276del . . . CAMSAP1 157922 hgsc.bcm.edu 36 9 137850244 137850246 + In_Frame_Del DEL CTC CTC - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CTC CTC . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_015447 exon13 c.3997_3999del p.1333_1333del . . . PRPS1 5631 hgsc.bcm.edu 36 X 106772275 106772275 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002764 exon4 c.C429T p.D143D . . . WDR44 54521 hgsc.bcm.edu 36 X 117416385 117416385 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G A A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001184966 exon7 c.G1123A p.A375T . . . GRIA3 2892 hgsc.bcm.edu 36 X 122389486 122389486 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_007325 exon12 c.C1891T p.R631C . . . AIFM1 9131 hgsc.bcm.edu 36 X 129102252 129102252 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_145812 exon7 c.G706C p.D236H . . . PLAC1 10761 hgsc.bcm.edu 36 X 133528196 133528196 + Missense_Mutation SNP G G C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021796 exon3 c.C183G p.C61W . . . SLC9A6 10479 hgsc.bcm.edu 36 X 134949949 134949949 + Silent SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001177651 exon16 c.A1620G p.T540T . . . MCF2 4168 hgsc.bcm.edu 36 X 138506382 138506382 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001099855 exon22 c.T2449C p.C817R . . . FMR1 2332 hgsc.bcm.edu 36 X 146837973 146837973 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001185082 exon16 c.C1678T p.R560C . . . MAMLD1 10046 hgsc.bcm.edu 36 X 149389524 149389524 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001177466 exon2 c.C946T p.R316C . . . MTM1 4534 hgsc.bcm.edu 36 X 149538257 149538257 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000252 exon6 c.T431C p.L144P . . . ATP2B3 492 hgsc.bcm.edu 36 X 152478497 152478497 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021949 exon16 c.C2742T p.Y914Y . . . TKTL1 8277 hgsc.bcm.edu 36 X 153196765 153196765 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001145933 exon7 c.G895A p.A299T . . . SCML1 6322 hgsc.bcm.edu 36 X 17679965 17679965 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006746 exon6 c.T732G p.D244E . . . BEND2 139105 hgsc.bcm.edu 36 X 18144589 18144589 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_153346 exon2 c.C211A p.H71N . . . SCML2 10389 hgsc.bcm.edu 36 X 18174847 18174847 + Silent SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006089 exon13 c.A1593G p.G531G . . . DMD 1756 hgsc.bcm.edu 36 X 32382840 32382840 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004006 exon26 c.G3463T p.G1155C . . . DUSP21 63904 hgsc.bcm.edu 36 X 44588418 44588418 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_022076 exon1 c.C96T p.S32S . . . GATA1 2623 hgsc.bcm.edu 36 X 48535334 48535334 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_002049 exon3 c.C360T p.A120A . . . CCNB3 85417 hgsc.bcm.edu 36 X 50111077 50111077 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033670 exon7 c.G746A p.S249N . . . SMC1A 8243 hgsc.bcm.edu 36 X 53455922 53455922 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_006306 exon6 c.G861A p.K287K . . . PHF8 23133 hgsc.bcm.edu 36 X 54065998 54065998 + Silent SNP A G G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001184898 exon3 c.T102C p.C34C . . . WNK3 65267 hgsc.bcm.edu 36 X 54352333 54352333 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001002838 exon4 c.C851T p.T284M . . . ERCC6L 54821 hgsc.bcm.edu 36 X 71342222 71342222 + Silent SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_017669 exon2 c.C3120A p.T1040T . . . PHKA1 5255 hgsc.bcm.edu 36 X 71771733 71771733 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_001172436 exon16 c.C1711A p.L571I . . . NAP1L2 4674 hgsc.bcm.edu 36 X 72350834 72350834 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021963 exon1 c.A220G p.K74E . . . PGK1 5230 hgsc.bcm.edu 36 X 77246536 77246536 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_000291 exon1 c.A43G p.K15E . . . CYLC1 1538 hgsc.bcm.edu 36 X 83028246 83028246 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_021118 exon5 c.T1954C p.X652Q . . . MED12 9968 hgsc.bcm.edu 36 X 70277823 70277825 + In_Frame_Del DEL CAG CAG - novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 CAG CAG . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_005120 exon43 c.6286_6288del p.2096_2096del . . . KDM5D 8284 hgsc.bcm.edu 36 Y 20363019 20363019 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_004653 exon4 c.G341A p.S114N . . . TBL1Y 90665 hgsc.bcm.edu 36 Y 7014357 7014357 + Silent SNP C C T novel unknown TCGA-AA-A00J-01A-02W-A005-10 TCGA-AA-A00J-10A-01W-A005-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina SOLID 3ad6403a-e8d2-4e67-b132-31b66d09729a 9d1b19aa-c5ee-4971-b5c3-82ebe20ef456 NM_033284 exon16 c.C1179T p.C393C . . .