Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
MAD1L1	8379	hgsc.bcm.edu	36	7	2236188	2236188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MMD2	221938	hgsc.bcm.edu	36	7	4965168	4965168	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EIF2AK1	27102	hgsc.bcm.edu	36	7	6052254	6052254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BMPER	168667	hgsc.bcm.edu	36	7	34159271	34159271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF479	90827	hgsc.bcm.edu	36	7	57191653	57191653	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SBDS	51119	hgsc.bcm.edu	36	7	66093671	66093671	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AKAP9	10142	hgsc.bcm.edu	36	7	91564099	91564099	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZAN	7455	hgsc.bcm.edu	36	7	100186320	100186320	+	Silent	SNP	T	T	C	rs2293768	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MUC17	140453	hgsc.bcm.edu	36	7	100463999	100463999	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CUX1	1523	hgsc.bcm.edu	36	7	101627215	101627215	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3CG	5294	hgsc.bcm.edu	36	7	106295758	106295758	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PPP1R3A	5506	hgsc.bcm.edu	36	7	113309379	113309379	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PPP1R3A	5506	hgsc.bcm.edu	36	7	113345820	113345820	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MET	8731	hgsc.bcm.edu	36	7	116206244	116206244	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WNT16	51384	hgsc.bcm.edu	36	7	120758997	120758997	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C7orf49	78996	hgsc.bcm.edu	36	7	134502132	134502132	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TRYX3	136541	hgsc.bcm.edu	36	7	141601463	141601463	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR2A12	346525	hgsc.bcm.edu	36	7	143423924	143423924	+	Missense_Mutation	SNP	G	G	A	rs34947817	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GIMAP7	168537	hgsc.bcm.edu	36	7	149848584	149848584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GIMAP4	55303	hgsc.bcm.edu	36	7	149900208	149900208	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MLL3	58508	hgsc.bcm.edu	36	7	151482141	151482141	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MLL3	58508	hgsc.bcm.edu	36	7	151490270	151490270	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MLL3	58508	hgsc.bcm.edu	36	7	151591134	151591134	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DEFB129	140881	hgsc.bcm.edu	36	20	158247	158247	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SDCBP2	27111	hgsc.bcm.edu	36	20	1241141	1241141	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SNRPB	6628	hgsc.bcm.edu	36	20	2396288	2396288	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FOXA2	3170	hgsc.bcm.edu	36	20	22511345	22511345	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMEM90B	0	hgsc.bcm.edu	36	20	24471767	24471767	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TTLL9	164395	hgsc.bcm.edu	36	20	29994412	29994412	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDK5RAP1	51654	hgsc.bcm.edu	36	20	31418341	31418341	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LBP	3929	hgsc.bcm.edu	36	20	36431117	36431117	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SEMG2	6407	hgsc.bcm.edu	36	20	43285116	43285116	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLTP	5360	hgsc.bcm.edu	36	20	43961109	43961109	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF334	55713	hgsc.bcm.edu	36	20	44563870	44563870	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZMYND8	23613	hgsc.bcm.edu	36	20	45308281	45308281	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC9A8	23315	hgsc.bcm.edu	36	20	47865033	47865033	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GNAS	2778	hgsc.bcm.edu	36	20	56863769	56863769	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TAF4	6874	hgsc.bcm.edu	36	20	59984726	59984726	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PRIC285	85441	hgsc.bcm.edu	36	20	61671039	61671039	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
XKR3	150165	hgsc.bcm.edu	36	22	15644916	15644916	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CLTCL1	8218	hgsc.bcm.edu	36	22	17555515	17555515	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TBX1	6899	hgsc.bcm.edu	36	22	18146782	18146782	+	Missense_Mutation	SNP	C	C	T	rs4819522	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADRBK2	157	hgsc.bcm.edu	36	22	24416209	24416209	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RFPL3	10738	hgsc.bcm.edu	36	22	31086703	31086703	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GCAT	23464	hgsc.bcm.edu	36	22	36535935	36535935	+	Missense_Mutation	SNP	T	T	C	rs2285178	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TOMM22	56993	hgsc.bcm.edu	36	22	37408284	37408284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EFCAB6	64800	hgsc.bcm.edu	36	22	42343042	42343042	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LDOC1L	84247	hgsc.bcm.edu	36	22	43272056	43272056	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SMC1B	27127	hgsc.bcm.edu	36	22	44161567	44161567	+	Silent	SNP	T	T	C	rs6007010	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RIBC2	26150	hgsc.bcm.edu	36	22	44205544	44205544	+	Missense_Mutation	SNP	G	G	A	rs2072770	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TM9SF1	10548	hgsc.bcm.edu	36	14	23731999	23731999	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ACTR10	55860	hgsc.bcm.edu	36	14	57768714	57768714	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DACT1	51339	hgsc.bcm.edu	36	14	58182237	58182237	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HIF1A	3091	hgsc.bcm.edu	36	14	61277657	61277657	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SYNE2	23224	hgsc.bcm.edu	36	14	63612456	63612456	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EIF2S1	1965	hgsc.bcm.edu	36	14	66901238	66901238	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DCAF4	0	hgsc.bcm.edu	36	14	72490687	72490687	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NUMB	8650	hgsc.bcm.edu	36	14	72813183	72813183	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DLST	1743	hgsc.bcm.edu	36	14	74429879	74429879	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSHR	7253	hgsc.bcm.edu	36	14	80679670	80679670	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSHR	7253	hgsc.bcm.edu	36	14	80679858	80679858	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSHR	7253	hgsc.bcm.edu	36	14	80680049	80680049	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CHGA	1113	hgsc.bcm.edu	36	14	92467594	92467594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIAA1409	57578	hgsc.bcm.edu	36	14	93148947	93148947	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TCL1B	9623	hgsc.bcm.edu	36	14	95226940	95226940	+	Missense_Mutation	SNP	G	G	A	rs1064017	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EML1	2009	hgsc.bcm.edu	36	14	99447634	99447634	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
POLRMT	5442	hgsc.bcm.edu	36	19	570021	570021	+	Silent	SNP	G	G	C	rs14155	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
STK11	6794	hgsc.bcm.edu	36	19	1171416	1171416	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
STK11	6794	hgsc.bcm.edu	36	19	1172291	1172291	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C19orf35	374872	hgsc.bcm.edu	36	19	2231885	2231885	+	Missense_Mutation	SNP	G	G	A	rs55662626	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LMNB2	84823	hgsc.bcm.edu	36	19	2383482	2383482	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C19orf71	100128569	hgsc.bcm.edu	36	19	3494397	3494397	+	Missense_Mutation	SNP	C	C	T	rs12608919	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLIN3	0	hgsc.bcm.edu	36	19	4803137	4803137	+	Silent	SNP	C	C	T	rs1055919	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FUT5	2527	hgsc.bcm.edu	36	19	5817724	5817724	+	Missense_Mutation	SNP	G	G	A	rs4807054	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PSPN	5623	hgsc.bcm.edu	36	19	6326831	6326831	+	Silent	SNP	G	G	A	rs2304198	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C3	718	hgsc.bcm.edu	36	19	6629264	6629264	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FBN3	84467	hgsc.bcm.edu	36	19	8082569	8082569	+	Silent	SNP	G	G	A	rs35306870	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FBN3	84467	hgsc.bcm.edu	36	19	8082640	8082640	+	Missense_Mutation	SNP	C	C	T	rs12975322	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF700	90592	hgsc.bcm.edu	36	19	11920838	11920838	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IL27RA	9466	hgsc.bcm.edu	36	19	14003705	14003705	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PGLYRP2	114770	hgsc.bcm.edu	36	19	15447672	15447672	+	Missense_Mutation	SNP	A	A	T	rs892145	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PGLYRP2	114770	hgsc.bcm.edu	36	19	15448185	15448185	+	Missense_Mutation	SNP	C	C	T	rs733731	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NWD1	284434	hgsc.bcm.edu	36	19	16760865	16760865	+	Missense_Mutation	SNP	A	A	G	rs2608738	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OCEL1	79629	hgsc.bcm.edu	36	19	17198928	17198928	+	Silent	SNP	C	C	T	rs1045201	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CILP2	148113	hgsc.bcm.edu	36	19	19516094	19516094	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATP13A1	57130	hgsc.bcm.edu	36	19	19626976	19626976	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF85	7639	hgsc.bcm.edu	36	19	20924051	20924051	+	Silent	SNP	A	A	T	rs11665995	byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLEKHG2	64857	hgsc.bcm.edu	36	19	44605398	44605398	+	Missense_Mutation	SNP	A	A	G	rs16973407	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SELV	348303	hgsc.bcm.edu	36	19	44701236	44701236	+	Missense_Mutation	SNP	A	A	G	rs56149652	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FCGBP	8857	hgsc.bcm.edu	36	19	45124882	45124882	+	Silent	SNP	G	G	A	rs34466648	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SPTBN4	57731	hgsc.bcm.edu	36	19	45764082	45764082	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARHGEF1	9138	hgsc.bcm.edu	36	19	47087954	47087954	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF180	7733	hgsc.bcm.edu	36	19	49693186	49693186	+	Missense_Mutation	SNP	G	G	A	rs2571108	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PRKD2	25865	hgsc.bcm.edu	36	19	51895929	51895929	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RUVBL2	10856	hgsc.bcm.edu	36	19	54209605	54209605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ALDH16A1	126133	hgsc.bcm.edu	36	19	54660897	54660897	+	Silent	SNP	C	C	T	rs10853810	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CACNG6	59285	hgsc.bcm.edu	36	19	59193339	59193339	+	Silent	SNP	G	G	A	rs34604090	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LILRA2	11027	hgsc.bcm.edu	36	19	59777582	59777582	+	Missense_Mutation	SNP	C	C	A	rs1834698	by2Hit2Allele;byCluster;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LILRA2	11027	hgsc.bcm.edu	36	19	59777583	59777583	+	Missense_Mutation	SNP	A	A	T	rs1834697	by2Hit2Allele;byCluster;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LILRB1	10859	hgsc.bcm.edu	36	19	59835303	59835303	+	Missense_Mutation	SNP	G	G	T	rs1061681	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIR3DP1	768329	hgsc.bcm.edu	36	19	59993323	59993323	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIR2DS4	3809	hgsc.bcm.edu	36	19	60050455	60050455	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FCAR	2204	hgsc.bcm.edu	36	19	60088712	60088712	+	Silent	SNP	A	A	G	rs1865096	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GP6	51206	hgsc.bcm.edu	36	19	60218157	60218157	+	Missense_Mutation	SNP	T	T	G	rs1671152	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GP6	51206	hgsc.bcm.edu	36	19	60218171	60218171	+	Missense_Mutation	SNP	A	A	T	rs1654413	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GP6	51206	hgsc.bcm.edu	36	19	60218185	60218185	+	Missense_Mutation	SNP	G	G	C	rs2304166	byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GP6	51206	hgsc.bcm.edu	36	19	60230792	60230792	+	Silent	SNP	T	T	C	rs1654425	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NLRP4	147945	hgsc.bcm.edu	36	19	61062397	61062397	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PEG3	5178	hgsc.bcm.edu	36	19	62020630	62020630	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AURKC	6795	hgsc.bcm.edu	36	19	62438450	62438450	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC7A2	6542	hgsc.bcm.edu	36	8	17453860	17453860	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
R3HCC1	203069	hgsc.bcm.edu	36	8	23204875	23204875	+	Silent	SNP	A	A	G	rs2272762	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDCA2	157313	hgsc.bcm.edu	36	8	25399217	25399217	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIF13B	23303	hgsc.bcm.edu	36	8	29006199	29006199	+	Silent	SNP	C	C	T	rs17059670	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARFGEF1	10565	hgsc.bcm.edu	36	8	68299779	68299779	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PREX2	80243	hgsc.bcm.edu	36	8	69182958	69182958	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KCNB2	9312	hgsc.bcm.edu	36	8	74012179	74012179	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RUNX1T1	862	hgsc.bcm.edu	36	8	93067650	93067650	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CSMD3	114788	hgsc.bcm.edu	36	8	113395847	113395847	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CSMD3	114788	hgsc.bcm.edu	36	8	113416804	113416804	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CSMD3	114788	hgsc.bcm.edu	36	8	113427580	113427580	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NOV	6134	hgsc.bcm.edu	36	8	120504341	120504341	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ENPP2	5168	hgsc.bcm.edu	36	8	120644335	120644335	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KHDRBS3	10656	hgsc.bcm.edu	36	8	136688425	136688425	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KCNK9	51305	hgsc.bcm.edu	36	8	140699945	140699945	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C8orf73	642475	hgsc.bcm.edu	36	8	144723858	144723858	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLEC	0	hgsc.bcm.edu	36	8	145062900	145062900	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C1orf159	54991	hgsc.bcm.edu	36	1	1011253	1011253	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLOD1	5351	hgsc.bcm.edu	36	1	11933066	11933066	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRRC38	126755	hgsc.bcm.edu	36	1	13712298	13712298	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AGMAT	79814	hgsc.bcm.edu	36	1	15778088	15778088	+	Silent	SNP	G	G	A	rs41270261	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIAA0090	23065	hgsc.bcm.edu	36	1	19438993	19438993	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C1QB	713	hgsc.bcm.edu	36	1	22860043	22860043	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
E2F2	1870	hgsc.bcm.edu	36	1	23720969	23720969	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARID1A	8289	hgsc.bcm.edu	36	1	26930557	26930557	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARID1A	8289	hgsc.bcm.edu	36	1	26973470	26973470	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CSF3R	1441	hgsc.bcm.edu	36	1	36707874	36707874	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMEM125	128218	hgsc.bcm.edu	36	1	43511301	43511301	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTCH2	8643	hgsc.bcm.edu	36	1	45080123	45080123	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZFYVE9	9372	hgsc.bcm.edu	36	1	52571105	52571105	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ORC1	10166	hgsc.bcm.edu	36	1	52631835	52631835	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ROR1	6095	hgsc.bcm.edu	36	1	64415996	64415996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C1orf173	127254	hgsc.bcm.edu	36	1	74859093	74859093	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GTF2B	2959	hgsc.bcm.edu	36	1	89098279	89098279	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CCDC18	343099	hgsc.bcm.edu	36	1	93470637	93470637	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARHGAP29	9411	hgsc.bcm.edu	36	1	94428142	94428142	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AMY2B	280	hgsc.bcm.edu	36	1	103917866	103917866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GSTM5	2949	hgsc.bcm.edu	36	1	110059354	110059354	+	Missense_Mutation	SNP	T	T	C	rs2227963	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KCNA3	3738	hgsc.bcm.edu	36	1	111018076	111018076	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GJA8	2703	hgsc.bcm.edu	36	1	145847078	145847078	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KPRP	448834	hgsc.bcm.edu	36	1	150998770	150998770	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC50A1	0	hgsc.bcm.edu	36	1	153377157	153377157	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IQGAP3	128239	hgsc.bcm.edu	36	1	154770281	154770281	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR10X1	128367	hgsc.bcm.edu	36	1	156815912	156815912	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATP1A4	480	hgsc.bcm.edu	36	1	158395524	158395524	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADAMTS4	9507	hgsc.bcm.edu	36	1	159433234	159433234	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATF6	22926	hgsc.bcm.edu	36	1	160027936	160027936	+	Missense_Mutation	SNP	C	C	T	rs1135983	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SERPINC1	462	hgsc.bcm.edu	36	1	172139767	172139767	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NCF2	4688	hgsc.bcm.edu	36	1	181810246	181810246	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IVNS1ABP	10625	hgsc.bcm.edu	36	1	183545155	183545155	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TPR	7175	hgsc.bcm.edu	36	1	184579219	184579219	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZBTB41	360023	hgsc.bcm.edu	36	1	195435725	195435725	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTPRC	5788	hgsc.bcm.edu	36	1	196942489	196942489	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NFASC	23114	hgsc.bcm.edu	36	1	203189947	203189947	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CENPF	1063	hgsc.bcm.edu	36	1	212853823	212853823	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARID4B	51742	hgsc.bcm.edu	36	1	233411551	233411551	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PPPDE1	51029	hgsc.bcm.edu	36	1	242935582	242935582	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NLRP3	114548	hgsc.bcm.edu	36	1	245659562	245659562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MUC2	4583	hgsc.bcm.edu	36	11	1083069	1083069	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR51I2	390064	hgsc.bcm.edu	36	11	5431414	5431414	+	Silent	SNP	G	G	T	rs2030094	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR56A5	390084	hgsc.bcm.edu	36	11	5946125	5946125	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR56B4	196335	hgsc.bcm.edu	36	11	6085728	6085728	+	Silent	SNP	T	T	C	rs4758387	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DNHD1	144132	hgsc.bcm.edu	36	11	6506571	6506571	+	Missense_Mutation	SNP	A	A	G	rs7480644	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DNHD1	144132	hgsc.bcm.edu	36	11	6506580	6506580	+	Missense_Mutation	SNP	A	A	G	rs2344828	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF215	7762	hgsc.bcm.edu	36	11	6933751	6933751	+	Missense_Mutation	SNP	G	G	C	rs2239730	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
INSC	387755	hgsc.bcm.edu	36	11	15178946	15178946	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3C2A	5286	hgsc.bcm.edu	36	11	17083424	17083424	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IGSF22	283284	hgsc.bcm.edu	36	11	18699664	18699664	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MRGPRX1	259249	hgsc.bcm.edu	36	11	18912770	18912770	+	Silent	SNP	T	T	C	rs2014931	by2Hit2Allele;byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NAV2	89797	hgsc.bcm.edu	36	11	20023281	20023281	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KCNA4	3739	hgsc.bcm.edu	36	11	29990640	29990640	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NR1H3	10062	hgsc.bcm.edu	36	11	47239544	47239544	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR4A5	81318	hgsc.bcm.edu	36	11	51268335	51268335	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR5I1	10798	hgsc.bcm.edu	36	11	55459920	55459920	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR8K1	390157	hgsc.bcm.edu	36	11	55870398	55870398	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR8U1	219417	hgsc.bcm.edu	36	11	55899701	55899701	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
VPS37C	55048	hgsc.bcm.edu	36	11	60656391	60656391	+	Missense_Mutation	SNP	A	A	T	rs2232142	by2Hit2Allele;byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C11orf9	745	hgsc.bcm.edu	36	11	61307932	61307932	+	Silent	SNP	T	T	C	rs174535	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NRXN2	9379	hgsc.bcm.edu	36	11	64146987	64146987	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CAPN1	823	hgsc.bcm.edu	36	11	64707546	64707546	+	Silent	SNP	C	C	T	rs17583	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MTL5	9633	hgsc.bcm.edu	36	11	68269134	68269134	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C2CD3	26005	hgsc.bcm.edu	36	11	73446201	73446201	+	Missense_Mutation	SNP	C	C	T	rs12419308	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RNF169	254225	hgsc.bcm.edu	36	11	74224553	74224553	+	Silent	SNP	G	G	A	rs1125609	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRRC32	2615	hgsc.bcm.edu	36	11	76050066	76050066	+	Silent	SNP	T	T	C	rs3740778	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ODZ4	26011	hgsc.bcm.edu	36	11	78058313	78058313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAT3	120114	hgsc.bcm.edu	36	11	91727200	91727200	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAT3	120114	hgsc.bcm.edu	36	11	91727825	91727825	+	Silent	SNP	C	C	T	rs7479732	by2Hit2Allele;byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CASP4	837	hgsc.bcm.edu	36	11	104325679	104325679	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATM	472	hgsc.bcm.edu	36	11	107625033	107625033	+	Missense_Mutation	SNP	T	T	C	rs56128736	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATM	472	hgsc.bcm.edu	36	11	107705050	107705050	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ANKK1	255239	hgsc.bcm.edu	36	11	112776050	112776050	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
USP28	57646	hgsc.bcm.edu	36	11	113185108	113185108	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TECTA	7007	hgsc.bcm.edu	36	11	120563812	120563812	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NTM	50863	hgsc.bcm.edu	36	11	131682897	131682897	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DUSP22	56940	hgsc.bcm.edu	36	6	293819	293819	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYLK4	340156	hgsc.bcm.edu	36	6	2638069	2638069	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RIPK1	8737	hgsc.bcm.edu	36	6	3050896	3050896	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRRC16A	55604	hgsc.bcm.edu	36	6	25543737	25543737	+	Silent	SNP	A	A	G	rs9467515	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BTN1A1	696	hgsc.bcm.edu	36	6	26609876	26609876	+	Silent	SNP	T	T	C	rs1321479	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR2B2	81697	hgsc.bcm.edu	36	6	27987530	27987530	+	Missense_Mutation	SNP	C	C	G	rs9368537	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GABBR1	10537	hgsc.bcm.edu	36	6	29697548	29697548	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DDR1	780	hgsc.bcm.edu	36	6	30967793	30967793	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TNXB	7148	hgsc.bcm.edu	36	6	32118251	32118251	+	Missense_Mutation	SNP	T	T	A	rs17421133	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TNXB	7148	hgsc.bcm.edu	36	6	32155004	32155004	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HLA-DRA	3122	hgsc.bcm.edu	36	6	32519013	32519013	+	Silent	SNP	A	A	C	rs8084	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HLA-DRA	3122	hgsc.bcm.edu	36	6	32519624	32519624	+	Missense_Mutation	SNP	T	T	G	rs7192	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NCR2	9436	hgsc.bcm.edu	36	6	41417530	41417530	+	Missense_Mutation	SNP	T	T	C	rs2236369	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CENPQ	55166	hgsc.bcm.edu	36	6	49567937	49567937	+	Missense_Mutation	SNP	A	A	G	rs2501968	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DST	667	hgsc.bcm.edu	36	6	56525504	56525504	+	Missense_Mutation	SNP	T	T	C	rs4715631	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DST	667	hgsc.bcm.edu	36	6	56604066	56604066	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PHIP	55023	hgsc.bcm.edu	36	6	79792464	79792464	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
POPDC3	64208	hgsc.bcm.edu	36	6	105713132	105713132	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SCML4	256380	hgsc.bcm.edu	36	6	108135802	108135802	+	Silent	SNP	T	T	C	rs3734754	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C6orf174	387104	hgsc.bcm.edu	36	6	127839067	127839067	+	Silent	SNP	G	G	A	rs3734450	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TNFAIP3	7128	hgsc.bcm.edu	36	6	138237844	138237844	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TNFAIP3	7128	hgsc.bcm.edu	36	6	138244104	138244104	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SYNE1	23345	hgsc.bcm.edu	36	6	152697000	152697000	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OPRM1	4988	hgsc.bcm.edu	36	6	154452829	154452829	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C6orf118	168090	hgsc.bcm.edu	36	6	165633907	165633907	+	Missense_Mutation	SNP	C	C	T	rs17852379	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIF25	3834	hgsc.bcm.edu	36	6	168173121	168173121	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIF25	3834	hgsc.bcm.edu	36	6	168183602	168183602	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYO1C	4643	hgsc.bcm.edu	36	17	1321979	1321979	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WDR81	124997	hgsc.bcm.edu	36	17	1578318	1578318	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SGSM2	9905	hgsc.bcm.edu	36	17	2222484	2222484	+	Silent	SNP	C	C	G	rs3213712	by2Hit2Allele;byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR1D2	4991	hgsc.bcm.edu	36	17	2942967	2942967	+	Missense_Mutation	SNP	C	C	T	rs769423	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZZEF1	23140	hgsc.bcm.edu	36	17	3899832	3899832	+	Silent	SNP	T	T	C	rs781853	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZZEF1	23140	hgsc.bcm.edu	36	17	3899851	3899851	+	Missense_Mutation	SNP	A	A	G	rs781852	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TM4SF5	9032	hgsc.bcm.edu	36	17	4632567	4632567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLD2	5338	hgsc.bcm.edu	36	17	4665742	4665742	+	Silent	SNP	A	A	G	rs1132448	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIF1C	10749	hgsc.bcm.edu	36	17	4866398	4866398	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC16A13	201232	hgsc.bcm.edu	36	17	6882835	6882835	+	Silent	SNP	G	G	T	rs33979567	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NEURL4	84461	hgsc.bcm.edu	36	17	7162109	7162109	+	Silent	SNP	G	G	A	rs1127440	byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TP53	7157	hgsc.bcm.edu	36	17	7514724	7514724	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TP53	7157	hgsc.bcm.edu	36	17	7517845	7517845	+	Missense_Mutation	SNP	C	C	T	rs28934576	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TP53	7157	hgsc.bcm.edu	36	17	7517863	7517863	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TP53	7157	hgsc.bcm.edu	36	17	7518264	7518264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TP53	7157	hgsc.bcm.edu	36	17	7518941	7518941	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TP53	7157	hgsc.bcm.edu	36	17	7518980	7518980	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CNTROB	116840	hgsc.bcm.edu	36	17	7788680	7788680	+	Missense_Mutation	SNP	C	C	A	rs11650083	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CNTROB	116840	hgsc.bcm.edu	36	17	7789812	7789812	+	Silent	SNP	C	C	G	rs4462665	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DNAH9	1770	hgsc.bcm.edu	36	17	11591782	11591782	+	Missense_Mutation	SNP	A	A	G	rs3744581	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADORA2B	136	hgsc.bcm.edu	36	17	15789323	15789323	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADORA2B	136	hgsc.bcm.edu	36	17	15789362	15789362	+	Silent	SNP	C	C	T	rs2228101	byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RAI1	10743	hgsc.bcm.edu	36	17	17637256	17637256	+	Missense_Mutation	SNP	G	G	C	rs3803763	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SMCR8	140775	hgsc.bcm.edu	36	17	18161859	18161859	+	Silent	SNP	C	C	T	rs1563631	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SHMT1	6470	hgsc.bcm.edu	36	17	18172821	18172821	+	Missense_Mutation	SNP	G	G	A	rs1979277	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIGS	94005	hgsc.bcm.edu	36	17	23911288	23911288	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NF1	4763	hgsc.bcm.edu	36	17	26711705	26711705	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UNC45B	146862	hgsc.bcm.edu	36	17	30537435	30537435	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LASP1	3927	hgsc.bcm.edu	36	17	34324184	34324184	+	Silent	SNP	A	A	G	rs525989	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLXDC1	57125	hgsc.bcm.edu	36	17	34549525	34549525	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDK12	0	hgsc.bcm.edu	36	17	34881416	34881416	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
STARD3	10948	hgsc.bcm.edu	36	17	35069275	35069275	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ERBB2	2064	hgsc.bcm.edu	36	17	35121736	35121736	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRT33A	3883	hgsc.bcm.edu	36	17	36756679	36756679	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KAT2A	2648	hgsc.bcm.edu	36	17	37520126	37520126	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
COASY	80347	hgsc.bcm.edu	36	17	37968330	37968330	+	Missense_Mutation	SNP	C	C	A	rs615942	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AOC3	8639	hgsc.bcm.edu	36	17	38258248	38258248	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ITGB3	3690	hgsc.bcm.edu	36	17	42724776	42724776	+	Silent	SNP	A	A	G	rs4642	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ITGB3	3690	hgsc.bcm.edu	36	17	42724788	42724788	+	Silent	SNP	G	G	A	rs4634	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SPATA20	64847	hgsc.bcm.edu	36	17	45983469	45983469	+	Missense_Mutation	SNP	T	T	A	rs9913430	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WFIKKN2	124857	hgsc.bcm.edu	36	17	46272338	46272338	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WFIKKN2	124857	hgsc.bcm.edu	36	17	46272608	46272608	+	Silent	SNP	C	C	T	rs36031777	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BZRAP1	9256	hgsc.bcm.edu	36	17	53743237	53743237	+	Missense_Mutation	SNP	C	C	G	rs2680704	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C17orf71	55181	hgsc.bcm.edu	36	17	54643790	54643790	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PRKCA	5578	hgsc.bcm.edu	36	17	62215484	62215484	+	Silent	SNP	G	G	A	rs2228945	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HELZ	9931	hgsc.bcm.edu	36	17	62535254	62535254	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CD300LF	146722	hgsc.bcm.edu	36	17	70203523	70203523	+	Missense_Mutation	SNP	T	T	C	rs2034310	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
USH1G	124590	hgsc.bcm.edu	36	17	70427797	70427797	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC25A19	60386	hgsc.bcm.edu	36	17	70791212	70791212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TRIM65	201292	hgsc.bcm.edu	36	17	71398969	71398969	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DNAH17	8632	hgsc.bcm.edu	36	17	74022603	74022603	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CBX8	57332	hgsc.bcm.edu	36	17	75383249	75383249	+	Missense_Mutation	SNP	C	C	A	rs4889891	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BAIAP2	10458	hgsc.bcm.edu	36	17	76704185	76704185	+	Missense_Mutation	SNP	A	A	G	rs4969391	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ACTG1	71	hgsc.bcm.edu	36	17	77092614	77092614	+	Silent	SNP	G	G	A	rs1139405	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSPAN10	83882	hgsc.bcm.edu	36	17	77222566	77222566	+	Silent	SNP	C	C	T	rs6565616	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSPAN10	83882	hgsc.bcm.edu	36	17	77222848	77222848	+	Silent	SNP	T	T	C	rs7210193	by2Hit2Allele;byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WDR45L	56270	hgsc.bcm.edu	36	17	78167730	78167730	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NCAM2	4685	hgsc.bcm.edu	36	21	21762968	21762968	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADAMTS5	11096	hgsc.bcm.edu	36	21	27227083	27227083	+	Missense_Mutation	SNP	C	C	T	rs2830585	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRTAP19-4	337971	hgsc.bcm.edu	36	21	30791267	30791267	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SYNJ1	8867	hgsc.bcm.edu	36	21	32933283	32933283	+	Silent	SNP	G	G	A	rs2230766	byCluster;byFrequency;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RIPK4	54101	hgsc.bcm.edu	36	21	42060236	42060236	+	Missense_Mutation	SNP	G	G	C	rs6586239	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UMODL1	89766	hgsc.bcm.edu	36	21	42383496	42383496	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UMODL1	89766	hgsc.bcm.edu	36	21	42383506	42383506	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UMODL1	89766	hgsc.bcm.edu	36	21	42420942	42420942	+	Missense_Mutation	SNP	G	G	A	rs220159	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMPRSS3	64699	hgsc.bcm.edu	36	21	42678706	42678706	+	Silent	SNP	C	C	T	rs2839501	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
COL6A2	1292	hgsc.bcm.edu	36	21	46356868	46356868	+	Silent	SNP	C	C	T	rs59531343	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SOLH	6650	hgsc.bcm.edu	36	16	543416	543416	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CACNA1H	8912	hgsc.bcm.edu	36	16	1200963	1200963	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ABCA3	21	hgsc.bcm.edu	36	16	2279472	2279472	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLX4	0	hgsc.bcm.edu	36	16	3579828	3579828	+	Missense_Mutation	SNP	G	G	A	rs3810813	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CREBBP	1387	hgsc.bcm.edu	36	16	3747903	3747903	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
XYLT1	64131	hgsc.bcm.edu	36	16	17110302	17110302	+	Silent	SNP	G	G	A	rs34511974	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMC7	79905	hgsc.bcm.edu	36	16	18964167	18964167	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PDILT	204474	hgsc.bcm.edu	36	16	20303561	20303561	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DCUN1D3	123879	hgsc.bcm.edu	36	16	20781014	20781014	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PALB2	79728	hgsc.bcm.edu	36	16	23522339	23522339	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RBBP6	5930	hgsc.bcm.edu	36	16	24467773	24467773	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RBBP6	5930	hgsc.bcm.edu	36	16	24489826	24489826	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IL4R	3566	hgsc.bcm.edu	36	16	27281681	27281681	+	Missense_Mutation	SNP	T	T	C	rs1805015	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RABEP2	79874	hgsc.bcm.edu	36	16	28833232	28833232	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ITGAL	3683	hgsc.bcm.edu	36	16	30398016	30398016	+	Missense_Mutation	SNP	G	G	A	rs34166708	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ITGAM	3684	hgsc.bcm.edu	36	16	31244220	31244220	+	Silent	SNP	G	G	A	rs1143682	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CYLD	1540	hgsc.bcm.edu	36	16	49378350	49378350	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NLRC5	84166	hgsc.bcm.edu	36	16	55646900	55646900	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC7A6	9057	hgsc.bcm.edu	36	16	66883037	66883037	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DHODH	1723	hgsc.bcm.edu	36	16	70600183	70600183	+	Missense_Mutation	SNP	A	A	C	rs3213422	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DHODH	1723	hgsc.bcm.edu	36	16	70613786	70613786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF469	84627	hgsc.bcm.edu	36	16	87028673	87028673	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
COLEC12	81035	hgsc.bcm.edu	36	18	336821	336821	+	Silent	SNP	C	C	T	rs3826628	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SMCHD1	23347	hgsc.bcm.edu	36	18	2753697	2753697	+	Silent	SNP	C	C	T	rs483547	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYOM1	8736	hgsc.bcm.edu	36	18	3057278	3057278	+	Silent	SNP	A	A	G	rs2230164	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYOM1	8736	hgsc.bcm.edu	36	18	3178882	3178882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
L3MBTL4	91133	hgsc.bcm.edu	36	18	5946238	5946238	+	Missense_Mutation	SNP	C	C	T	rs3737353	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIAA0802	23255	hgsc.bcm.edu	36	18	8816031	8816031	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TXNDC2	84203	hgsc.bcm.edu	36	18	9877394	9877394	+	Silent	SNP	C	C	T	rs2240910	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TXNDC2	84203	hgsc.bcm.edu	36	18	9877546	9877546	+	Missense_Mutation	SNP	G	G	A	rs2240906	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TXNDC2	84203	hgsc.bcm.edu	36	18	9878069	9878069	+	Silent	SNP	A	A	G	rs2240905	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NPC1	257641	hgsc.bcm.edu	36	18	19368464	19368464	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OSBPL1A	114876	hgsc.bcm.edu	36	18	20145973	20145973	+	Silent	SNP	A	A	G	rs2337961	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AQP4	361	hgsc.bcm.edu	36	18	22695153	22695153	+	Missense_Mutation	SNP	A	A	T	rs61731038	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDH2	1000	hgsc.bcm.edu	36	18	23816999	23816999	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DSG4	147409	hgsc.bcm.edu	36	18	27240203	27240203	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KLHL14	57565	hgsc.bcm.edu	36	18	28514413	28514413	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C18orf34	374864	hgsc.bcm.edu	36	18	29058756	29058756	+	Missense_Mutation	SNP	A	A	C	rs457896	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3C3	5289	hgsc.bcm.edu	36	18	37821802	37821802	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LOXHD1	125336	hgsc.bcm.edu	36	18	42341509	42341509	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MRO	83876	hgsc.bcm.edu	36	18	46585522	46585522	+	Silent	SNP	G	G	A	rs2586776	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SMAD4	4089	hgsc.bcm.edu	36	18	46829100	46829100	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ALPK2	115701	hgsc.bcm.edu	36	18	54335257	54335257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SERPINB10	5273	hgsc.bcm.edu	36	18	59751364	59751364	+	Missense_Mutation	SNP	C	C	T	rs963075	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF516	9658	hgsc.bcm.edu	36	18	72220236	72220236	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MBP	5553	hgsc.bcm.edu	36	18	72830972	72830972	+	Silent	SNP	G	G	A	rs470797	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CHL1	10752	hgsc.bcm.edu	36	3	407684	407684	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
VHL	7428	hgsc.bcm.edu	36	3	10158612	10158612	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RFTN1	23180	hgsc.bcm.edu	36	3	16450453	16450453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PDCD6IP	10015	hgsc.bcm.edu	36	3	33830082	33830082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CX3CR1	1524	hgsc.bcm.edu	36	3	39282241	39282241	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CTNNB1	1499	hgsc.bcm.edu	36	3	41241138	41241138	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTPN23	25930	hgsc.bcm.edu	36	3	47427790	47427790	+	Silent	SNP	G	G	A	rs1531875	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PFKFB4	5210	hgsc.bcm.edu	36	3	48551025	48551025	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IMPDH2	3615	hgsc.bcm.edu	36	3	49039266	49039266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MON1A	84315	hgsc.bcm.edu	36	3	49922599	49922599	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DUSP7	1849	hgsc.bcm.edu	36	3	52059945	52059945	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRIG1	26018	hgsc.bcm.edu	36	3	66513794	66513794	+	Silent	SNP	G	G	A	rs35938214	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SHQ1	55164	hgsc.bcm.edu	36	3	72964216	72964216	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IMPG2	50939	hgsc.bcm.edu	36	3	102455242	102455242	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SEC22A	26984	hgsc.bcm.edu	36	3	124426687	124426687	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RYK	6259	hgsc.bcm.edu	36	3	135390442	135390442	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CPB1	1360	hgsc.bcm.edu	36	3	150060405	150060405	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HPS3	84343	hgsc.bcm.edu	36	3	150351081	150351081	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GPR149	344758	hgsc.bcm.edu	36	3	155538752	155538752	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GFM1	85476	hgsc.bcm.edu	36	3	159847321	159847321	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FNDC3B	64778	hgsc.bcm.edu	36	3	173553339	173553339	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3CA	5290	hgsc.bcm.edu	36	3	180399643	180399643	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3CA	5290	hgsc.bcm.edu	36	3	180418785	180418785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3CA	5290	hgsc.bcm.edu	36	3	180421629	180421629	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MCCC1	56922	hgsc.bcm.edu	36	3	184295081	184295081	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
YEATS2	55689	hgsc.bcm.edu	36	3	184957093	184957093	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LIPH	200879	hgsc.bcm.edu	36	3	186734075	186734075	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMEM44	93109	hgsc.bcm.edu	36	3	195806347	195806347	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMEM44	93109	hgsc.bcm.edu	36	3	195830467	195830467	+	Silent	SNP	C	C	T	rs1563970	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MUC4	4585	hgsc.bcm.edu	36	3	196997982	196997982	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MUC4	4585	hgsc.bcm.edu	36	3	196997996	196997996	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CD163L1	283316	hgsc.bcm.edu	36	12	7419738	7419738	+	Silent	SNP	G	G	A	rs7306824	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GRIN2B	2904	hgsc.bcm.edu	36	12	13616077	13616077	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRAS	3845	hgsc.bcm.edu	36	12	25269829	25269829	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRAS	3845	hgsc.bcm.edu	36	12	25271486	25271486	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BICD1	636	hgsc.bcm.edu	36	12	32372636	32372636	+	Silent	SNP	C	C	T	rs34447944	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ABCD2	225	hgsc.bcm.edu	36	12	38266273	38266273	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DDX23	9416	hgsc.bcm.edu	36	12	47516734	47516734	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LMBR1L	55716	hgsc.bcm.edu	36	12	47780462	47780462	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATF1	2668	hgsc.bcm.edu	36	12	49499695	49499695	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GALNT6	11226	hgsc.bcm.edu	36	12	50059624	50059624	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRT77	374454	hgsc.bcm.edu	36	12	51377833	51377833	+	Missense_Mutation	SNP	C	C	A	rs1567759	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NCKAP1L	3071	hgsc.bcm.edu	36	12	53180584	53180584	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GPR182	11318	hgsc.bcm.edu	36	12	55676305	55676305	+	Missense_Mutation	SNP	T	T	C	rs35493121	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GLI1	2735	hgsc.bcm.edu	36	12	56145734	56145734	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GNPTAB	79158	hgsc.bcm.edu	36	12	100677964	100677964	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UBE3B	89910	hgsc.bcm.edu	36	12	108446298	108446298	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MAPKAPK5	8550	hgsc.bcm.edu	36	12	110792494	110792494	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTPN11	5781	hgsc.bcm.edu	36	12	111375465	111375465	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OAS1	4938	hgsc.bcm.edu	36	12	111838827	111838827	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CIT	79947	hgsc.bcm.edu	36	12	118683235	118683235	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAM101A	144347	hgsc.bcm.edu	36	12	123364754	123364754	+	Silent	SNP	C	C	T	rs12318072	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMEM132D	121256	hgsc.bcm.edu	36	12	128124941	128124941	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TMEM132D	121256	hgsc.bcm.edu	36	12	128125001	128125001	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
POLE	5426	hgsc.bcm.edu	36	12	131730605	131730605	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CYFIP1	23191	hgsc.bcm.edu	36	15	20520673	20520673	+	Missense_Mutation	SNP	G	G	A	rs7170637	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TJP1	7082	hgsc.bcm.edu	36	15	27812624	27812624	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RYR3	6263	hgsc.bcm.edu	36	15	31692702	31692702	+	Missense_Mutation	SNP	A	A	G	rs2229116	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MGA	23269	hgsc.bcm.edu	36	15	39776317	39776317	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLTM	79811	hgsc.bcm.edu	36	15	56966556	56966556	+	Silent	SNP	G	G	A	rs2124203	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYO1E	4643	hgsc.bcm.edu	36	15	57242710	57242710	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF609	23060	hgsc.bcm.edu	36	15	62754421	62754421	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIAS1	8554	hgsc.bcm.edu	36	15	66165987	66165987	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IMP3	84888	hgsc.bcm.edu	36	15	73719184	73719184	+	Silent	SNP	G	G	T	rs13737	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BNC1	646	hgsc.bcm.edu	36	15	81723941	81723941	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF592	9640	hgsc.bcm.edu	36	15	83127450	83127450	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF592	9640	hgsc.bcm.edu	36	15	83142863	83142863	+	Missense_Mutation	SNP	G	G	A	rs8182086	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC28A1	9154	hgsc.bcm.edu	36	15	83279414	83279414	+	Silent	SNP	A	A	G	rs2242048	by2Hit2Allele;byCluster;byFrequency;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WDR93	56964	hgsc.bcm.edu	36	15	88077314	88077314	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BLM	641	hgsc.bcm.edu	36	15	89093757	89093757	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADAMTS17	170691	hgsc.bcm.edu	36	15	98332137	98332137	+	Missense_Mutation	SNP	T	T	C	rs2573652	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MAP3K15	389840	hgsc.bcm.edu	36	X	19326302	19326302	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DCAF8L1	0	hgsc.bcm.edu	36	X	27908087	27908087	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DMD	1756	hgsc.bcm.edu	36	X	31764844	31764844	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAM47C	442444	hgsc.bcm.edu	36	X	36939246	36939246	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CYBB	1536	hgsc.bcm.edu	36	X	37540242	37540242	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GATA1	2623	hgsc.bcm.edu	36	X	48534462	48534462	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CACNA1F	778	hgsc.bcm.edu	36	X	48968235	48968235	+	Silent	SNP	G	G	A	rs2235127	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HUWE1	10075	hgsc.bcm.edu	36	X	53588377	53588377	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WNK3	65267	hgsc.bcm.edu	36	X	54245322	54245322	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PFKFB1	5207	hgsc.bcm.edu	36	X	55037158	55037158	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ERCC6L	54821	hgsc.bcm.edu	36	X	71341606	71341606	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIAA2022	340533	hgsc.bcm.edu	36	X	73878422	73878422	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIAA2022	340533	hgsc.bcm.edu	36	X	73879896	73879896	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TBX22	50945	hgsc.bcm.edu	36	X	79170218	79170218	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARMCX5	64860	hgsc.bcm.edu	36	X	101744755	101744755	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IRS4	8471	hgsc.bcm.edu	36	X	107866171	107866171	+	Silent	SNP	C	C	T	rs2073115	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GUCY2F	2986	hgsc.bcm.edu	36	X	108506040	108506040	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DCX	1641	hgsc.bcm.edu	36	X	110442568	110442568	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRCH2	57631	hgsc.bcm.edu	36	X	114311158	114311158	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PGRMC1	10857	hgsc.bcm.edu	36	X	118254572	118254572	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZBTB33	10009	hgsc.bcm.edu	36	X	119272073	119272073	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAM70A	55026	hgsc.bcm.edu	36	X	119294911	119294911	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DCAF12L2	0	hgsc.bcm.edu	36	X	125126588	125126588	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AIFM1	9131	hgsc.bcm.edu	36	X	129111201	129111201	+	Silent	SNP	A	A	G	rs1139851	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MAP7D3	79649	hgsc.bcm.edu	36	X	135130617	135130617	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ATP11C	286410	hgsc.bcm.edu	36	X	138693059	138693059	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
L1CAM	3897	hgsc.bcm.edu	36	X	152784145	152784145	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IRAK1	3654	hgsc.bcm.edu	36	X	152935083	152935083	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OPN1LW	5956	hgsc.bcm.edu	36	X	153071708	153071708	+	Missense_Mutation	SNP	G	G	A	rs60549689	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZNF718	255403	hgsc.bcm.edu	36	4	144939	144939	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIGG	54872	hgsc.bcm.edu	36	4	517677	517677	+	Missense_Mutation	SNP	T	T	C	rs34623004	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FGFR3	2261	hgsc.bcm.edu	36	4	1773502	1773502	+	Silent	SNP	T	T	C	rs2234909	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAM193A	0	hgsc.bcm.edu	36	4	2631140	2631140	+	Missense_Mutation	SNP	A	A	G	rs17164077	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RGS12	6002	hgsc.bcm.edu	36	4	3385603	3385603	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KCNIP4	80333	hgsc.bcm.edu	36	4	20461264	20461264	+	Silent	SNP	A	A	G	rs3765121	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRRC66	339977	hgsc.bcm.edu	36	4	52556908	52556908	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PDGFRA	5156	hgsc.bcm.edu	36	4	54835793	54835793	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIT	3815	hgsc.bcm.edu	36	4	55256655	55256655	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EXOC1	55763	hgsc.bcm.edu	36	4	56421346	56421346	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADAMTS3	9508	hgsc.bcm.edu	36	4	73380311	73380311	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HNRPDL	9987	hgsc.bcm.edu	36	4	83569531	83569531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HELQ	113510	hgsc.bcm.edu	36	4	84556969	84556969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SMARCAD1	56916	hgsc.bcm.edu	36	4	95392802	95392802	+	Missense_Mutation	SNP	T	T	C	rs7439869	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DKK2	27123	hgsc.bcm.edu	36	4	108065170	108065170	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EGF	1950	hgsc.bcm.edu	36	4	111133876	111133876	+	Missense_Mutation	SNP	A	A	T	rs4698803	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ANK2	287	hgsc.bcm.edu	36	4	114499240	114499240	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAT4	79633	hgsc.bcm.edu	36	4	126461700	126461700	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NDUFC1	4717	hgsc.bcm.edu	36	4	140433179	140433179	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LRBA	987	hgsc.bcm.edu	36	4	151426586	151426586	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RBM46	166863	hgsc.bcm.edu	36	4	155938752	155938752	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PALLD	23022	hgsc.bcm.edu	36	4	170061529	170061529	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADAM29	11086	hgsc.bcm.edu	36	4	176134256	176134256	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WWC2	80014	hgsc.bcm.edu	36	4	184440880	184440880	+	Missense_Mutation	SNP	G	G	C	rs3814422	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CCDC111	201973	hgsc.bcm.edu	36	4	185840457	185840457	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CYP4V2	285440	hgsc.bcm.edu	36	4	187359349	187359349	+	Silent	SNP	T	T	C	rs3736456	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAT1	2195	hgsc.bcm.edu	36	4	187777629	187777629	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAT1	2195	hgsc.bcm.edu	36	4	187786422	187786422	+	Missense_Mutation	SNP	C	C	T	rs2304867	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TRIML2	205860	hgsc.bcm.edu	36	4	189249855	189249855	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TPO	7173	hgsc.bcm.edu	36	2	1397199	1397199	+	Silent	SNP	C	C	G	rs9678281	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TPO	7173	hgsc.bcm.edu	36	2	1470672	1470672	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KIDINS220	57498	hgsc.bcm.edu	36	2	8807827	8807827	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NBAS	51594	hgsc.bcm.edu	36	2	15481955	15481955	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
EFR3B	22979	hgsc.bcm.edu	36	2	25230680	25230680	+	Silent	SNP	T	T	C	rs2164808	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KHK	3795	hgsc.bcm.edu	36	2	27168756	27168756	+	Missense_Mutation	SNP	G	G	A	rs2304681	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MSH6	2956	hgsc.bcm.edu	36	2	47871730	47871730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GTF2A1L	11036	hgsc.bcm.edu	36	2	48727390	48727390	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BCL11A	53335	hgsc.bcm.edu	36	2	60541890	60541890	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SPRED2	200734	hgsc.bcm.edu	36	2	65394409	65394409	+	Silent	SNP	C	C	G	rs8827	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARHGAP25	9938	hgsc.bcm.edu	36	2	68903016	68903016	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLC4A5	57835	hgsc.bcm.edu	36	2	74320102	74320102	+	Silent	SNP	G	G	A	rs4853018	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TGOLN2	10618	hgsc.bcm.edu	36	2	85407591	85407591	+	Missense_Mutation	SNP	G	G	A	rs4247303	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NPAS2	4862	hgsc.bcm.edu	36	2	100931172	100931172	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GPR45	11250	hgsc.bcm.edu	36	2	105225681	105225681	+	Missense_Mutation	SNP	C	C	T	rs35946826	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FHL2	2274	hgsc.bcm.edu	36	2	105344208	105344208	+	Silent	SNP	G	G	A	rs3087523	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BUB1	699	hgsc.bcm.edu	36	2	111131612	111131612	+	Missense_Mutation	SNP	T	T	C	rs36109304	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MERTK	10461	hgsc.bcm.edu	36	2	112471414	112471414	+	Silent	SNP	C	C	T	rs3811634	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CNTNAP5	129684	hgsc.bcm.edu	36	2	124998354	124998354	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CNTNAP5	129684	hgsc.bcm.edu	36	2	125388238	125388238	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYO7B	4648	hgsc.bcm.edu	36	2	128083562	128083562	+	Silent	SNP	G	G	A	rs777432	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RAB6C	84084	hgsc.bcm.edu	36	2	130454727	130454727	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CCNT2	905	hgsc.bcm.edu	36	2	135428127	135428127	+	Silent	SNP	G	G	A	rs3814354	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LCT	3938	hgsc.bcm.edu	36	2	136307216	136307216	+	Missense_Mutation	SNP	C	C	T	rs3754689	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SCN1A	6323	hgsc.bcm.edu	36	2	166600991	166600991	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SCN9A	6335	hgsc.bcm.edu	36	2	166764499	166764499	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
XIRP2	129446	hgsc.bcm.edu	36	2	167700790	167700790	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GAD1	2571	hgsc.bcm.edu	36	2	171386871	171386871	+	Silent	SNP	T	T	C	rs11542313	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CHRNA1	1134	hgsc.bcm.edu	36	2	175326592	175326592	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PRKRA	8575	hgsc.bcm.edu	36	2	179009217	179009217	+	Silent	SNP	G	G	A	rs62176107	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TTN	7273	hgsc.bcm.edu	36	2	179104460	179104460	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TTN	7273	hgsc.bcm.edu	36	2	179192756	179192756	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TTN	7273	hgsc.bcm.edu	36	2	179355928	179355928	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CERKL	375298	hgsc.bcm.edu	36	2	182117694	182117694	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FAM171B	165215	hgsc.bcm.edu	36	2	187334886	187334886	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SF3B1	23451	hgsc.bcm.edu	36	2	197996926	197996926	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TRAK2	66008	hgsc.bcm.edu	36	2	201962430	201962430	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CPO	130749	hgsc.bcm.edu	36	2	207512599	207512599	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FN1	2335	hgsc.bcm.edu	36	2	215959824	215959824	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FN1	2335	hgsc.bcm.edu	36	2	216006396	216006396	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLCD4	84812	hgsc.bcm.edu	36	2	219206685	219206685	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OBSL1	23363	hgsc.bcm.edu	36	2	220140267	220140267	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SPHKAP	80309	hgsc.bcm.edu	36	2	228592494	228592494	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NGEF	25791	hgsc.bcm.edu	36	2	233467843	233467843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
NGEF	25791	hgsc.bcm.edu	36	2	233493259	233493259	+	Silent	SNP	G	G	A	rs778354	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UGT1A3	54659	hgsc.bcm.edu	36	2	234302542	234302542	+	Missense_Mutation	SNP	T	T	C	rs3892221	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UGT1A3	54659	hgsc.bcm.edu	36	2	234302592	234302592	+	Silent	SNP	G	G	A	rs6706232	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
UGT1A3	54659	hgsc.bcm.edu	36	2	234302651	234302651	+	Missense_Mutation	SNP	T	T	C	rs6431625	by2Hit2Allele;byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HDAC4	9759	hgsc.bcm.edu	36	2	239689521	239689521	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C2orf54	79919	hgsc.bcm.edu	36	2	241476685	241476685	+	Silent	SNP	T	T	C	rs6708304	by2Hit2Allele;byCluster	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DOCK8	81704	hgsc.bcm.edu	36	9	369837	369837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
JAK2	3717	hgsc.bcm.edu	36	9	5060051	5060051	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTPRD	5789	hgsc.bcm.edu	36	9	8450516	8450516	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FREM1	158326	hgsc.bcm.edu	36	9	14736360	14736360	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDKN2A	1029	hgsc.bcm.edu	36	9	21960919	21960919	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TEK	7010	hgsc.bcm.edu	36	9	27159606	27159606	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ALDH1B1	219	hgsc.bcm.edu	36	9	38386065	38386065	+	Missense_Mutation	SNP	G	G	T	rs2073478	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SECISBP2	79048	hgsc.bcm.edu	36	9	91133588	91133588	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTCH1	5727	hgsc.bcm.edu	36	9	97258446	97258446	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTCH1	5727	hgsc.bcm.edu	36	9	97287848	97287848	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
OR13D1	286365	hgsc.bcm.edu	36	9	106497444	106497444	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ABCA1	19	hgsc.bcm.edu	36	9	106611621	106611621	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PALM2-AKAP2	445815	hgsc.bcm.edu	36	9	111939521	111939521	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PALM2-AKAP2	445815	hgsc.bcm.edu	36	9	111939566	111939566	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DBC1	57805	hgsc.bcm.edu	36	9	120969783	120969783	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GAPVD1	26130	hgsc.bcm.edu	36	9	127123549	127123549	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CIZ1	25792	hgsc.bcm.edu	36	9	129980894	129980894	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LAMC3	10319	hgsc.bcm.edu	36	9	132950841	132950841	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
COL5A1	1289	hgsc.bcm.edu	36	9	136820825	136820825	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KCNT1	57582	hgsc.bcm.edu	36	9	137800332	137800332	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FLT3	2322	hgsc.bcm.edu	36	13	27506459	27506459	+	Silent	SNP	T	T	C	rs34374211	byCluster;byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C13orf26	122046	hgsc.bcm.edu	36	13	30438437	30438437	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TRIM13	10206	hgsc.bcm.edu	36	13	49484661	49484661	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SPRY2	10253	hgsc.bcm.edu	36	13	79809657	79809657	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DCT	1638	hgsc.bcm.edu	36	13	93929316	93929316	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C13orf39	196541	hgsc.bcm.edu	36	13	102144735	102144735	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
COL4A2	1284	hgsc.bcm.edu	36	13	109896227	109896227	+	Silent	SNP	C	C	T	rs4103	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AKR1C4	1109	hgsc.bcm.edu	36	10	5237796	5237796	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BEND7	222389	hgsc.bcm.edu	36	10	13574857	13574857	+	Silent	SNP	A	A	G	rs2251555	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ANKRD30A	91074	hgsc.bcm.edu	36	10	37526221	37526221	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ANXA8L2	244	hgsc.bcm.edu	36	10	47221233	47221233	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
WDFY4	57705	hgsc.bcm.edu	36	10	49668830	49668830	+	Silent	SNP	C	C	T	rs10857644	by2Hit2Allele;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
BICC1	80114	hgsc.bcm.edu	36	10	60228321	60228321	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RHOBTB1	9886	hgsc.bcm.edu	36	10	62318349	62318349	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARID5B	84159	hgsc.bcm.edu	36	10	63430065	63430065	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TACR2	6865	hgsc.bcm.edu	36	10	70846018	70846018	+	Missense_Mutation	SNP	A	A	G	rs5030920	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ADAMTS14	140766	hgsc.bcm.edu	36	10	72187843	72187843	+	Silent	SNP	C	C	T	rs6480463	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDH23	64072	hgsc.bcm.edu	36	10	73120312	73120312	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDH23	64072	hgsc.bcm.edu	36	10	73220975	73220975	+	Missense_Mutation	SNP	G	G	A	rs10466026	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PAPSS2	9060	hgsc.bcm.edu	36	10	89464501	89464501	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTEN	5728	hgsc.bcm.edu	36	10	89707686	89707686	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PIK3AP1	118788	hgsc.bcm.edu	36	10	98370188	98370188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLIT1	6586	hgsc.bcm.edu	36	10	98792710	98792710	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RRP12	23223	hgsc.bcm.edu	36	10	99131474	99131474	+	Silent	SNP	C	C	T	rs12218483	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C10orf62	414157	hgsc.bcm.edu	36	10	99340118	99340118	+	Silent	SNP	A	A	G	rs7093643	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C10orf79	80217	hgsc.bcm.edu	36	10	105929632	105929632	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C10orf119	79892	hgsc.bcm.edu	36	10	121609371	121609371	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FGFR2	2263	hgsc.bcm.edu	36	10	123237556	123237556	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TACC2	10579	hgsc.bcm.edu	36	10	123834399	123834399	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TACC2	10579	hgsc.bcm.edu	36	10	123836850	123836850	+	Silent	SNP	C	C	T	rs11599291	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TACC2	10579	hgsc.bcm.edu	36	10	123837345	123837345	+	Silent	SNP	G	G	A	rs10788237	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DMBT1	1755	hgsc.bcm.edu	36	10	124330388	124330388	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ZRANB1	54764	hgsc.bcm.edu	36	10	126663340	126663340	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DOCK1	1793	hgsc.bcm.edu	36	10	128711462	128711462	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTPRE	5791	hgsc.bcm.edu	36	10	129756439	129756439	+	Silent	SNP	C	C	G	rs7100666	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
AHRR	57491	hgsc.bcm.edu	36	5	487722	487722	+	Missense_Mutation	SNP	G	G	C	rs34453673	byFrequency	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IRX4	50805	hgsc.bcm.edu	36	5	1933891	1933891	+	Missense_Mutation	SNP	C	C	T	rs2232376	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDH10	1008	hgsc.bcm.edu	36	5	24545575	24545575	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDH10	1008	hgsc.bcm.edu	36	5	24545576	24545576	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C6	5688	hgsc.bcm.edu	36	5	41189853	41189853	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DIMT1L	27292	hgsc.bcm.edu	36	5	61730451	61730451	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
IPO11	51194	hgsc.bcm.edu	36	5	61862316	61862316	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TNPO1	3842	hgsc.bcm.edu	36	5	72204231	72204231	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ACOT12	134526	hgsc.bcm.edu	36	5	80675785	80675785	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SLCO6A1	133482	hgsc.bcm.edu	36	5	101752342	101752342	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
APC	324	hgsc.bcm.edu	36	5	112129987	112129987	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
APC	324	hgsc.bcm.edu	36	5	112185571	112185571	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
APC	324	hgsc.bcm.edu	36	5	112202532	112202532	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
APC	324	hgsc.bcm.edu	36	5	112203289	112203289	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
APC	324	hgsc.bcm.edu	36	5	112203431	112203431	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C5orf48	389320	hgsc.bcm.edu	36	5	125999734	125999734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
FBN2	2201	hgsc.bcm.edu	36	5	127740396	127740396	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RAPGEF6	51735	hgsc.bcm.edu	36	5	130859228	130859228	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ANKHD1	54882	hgsc.bcm.edu	36	5	139872664	139872664	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PCDHA4	56144	hgsc.bcm.edu	36	5	140167813	140167813	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PCDHA2	56146	hgsc.bcm.edu	36	5	140369488	140369488	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ARHGAP26	23092	hgsc.bcm.edu	36	5	142261787	142261787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
LARS	51520	hgsc.bcm.edu	36	5	145500014	145500014	+	Silent	SNP	G	G	A	rs17493851	byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SYNPO	11346	hgsc.bcm.edu	36	5	149978321	149978321	+	Missense_Mutation	SNP	G	G	A	rs6579797	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYOZ3	91977	hgsc.bcm.edu	36	5	150036489	150036489	+	Silent	SNP	C	C	T	rs57761602	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
MYOZ3	91977	hgsc.bcm.edu	36	5	150036500	150036500	+	Missense_Mutation	SNP	C	C	A	rs7737542	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GM2A	2760	hgsc.bcm.edu	36	5	150627081	150627081	+	Missense_Mutation	SNP	T	T	C	rs61740602	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GABRA1	2554	hgsc.bcm.edu	36	5	161232725	161232725	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
DUSP1	11266	hgsc.bcm.edu	36	5	172129300	172129300	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CDHR2	0	hgsc.bcm.edu	36	5	175950061	175950061	+	Missense_Mutation	SNP	C	C	T	rs2291442	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HK3	84376	hgsc.bcm.edu	36	5	176248153	176248153	+	Missense_Mutation	SNP	G	G	A	rs2304514	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RUFY1	80230	hgsc.bcm.edu	36	5	178953206	178953206	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C5orf45	51149	hgsc.bcm.edu	36	5	179218358	179218358	+	Silent	SNP	G	G	A	rs10060182	byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GFPT2	9945	hgsc.bcm.edu	36	5	179662186	179662186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PARP12	64761	hgsc.bcm.edu	36	7	139393278	139393278	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KLK12	43849	hgsc.bcm.edu	36	19	56226942	56226942	+	Splice_Site	SNP	A	A	G	rs3745540	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSPAN8	7103	hgsc.bcm.edu	36	12	69819897	69819897	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
HERC1	8925	hgsc.bcm.edu	36	15	61748952	61748952	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GATA1	2623	hgsc.bcm.edu	36	X	48534682	48534682	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PLAC8	51316	hgsc.bcm.edu	36	4	84245198	84245198	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C9orf174	0	hgsc.bcm.edu	36	9	99125025	99125025	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SSBP2	23635	hgsc.bcm.edu	36	5	80947047	80947047	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
APC	324	hgsc.bcm.edu	36	5	112156041	112156041	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TCEA3	6920	hgsc.bcm.edu	36	1	23586397	23586398	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GNAT1	2779	hgsc.bcm.edu	36	3	50205815	50205816	+	Frame_Shift_Ins	INS	-	-	CATCC	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ACOX2	8309	hgsc.bcm.edu	36	3	58492488	58492488	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
ABCF1	23	hgsc.bcm.edu	36	6	30653833	30653833	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SEC63	11231	hgsc.bcm.edu	36	6	108321448	108321448	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RBAK	57786	hgsc.bcm.edu	36	7	5071420	5071422	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	TTC	TTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
INHBA	3624	hgsc.bcm.edu	36	7	41696278	41696279	+	In_Frame_Ins	INS	-	-	TCC	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
SGK223	0	hgsc.bcm.edu	36	8	8272278	8272279	+	In_Frame_Ins	INS	-	-	GCCGCT	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
PTDSS1	9791	hgsc.bcm.edu	36	8	97343549	97343551	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
RIC8A	60626	hgsc.bcm.edu	36	11	199895	199897	+	In_Frame_Del	DEL	CCC	CCC	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	CCC	CCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C1QTNF5	114902	hgsc.bcm.edu	36	11	118715399	118715400	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRT4	3851	hgsc.bcm.edu	36	12	51493869	51493870	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
GPR56	9289	hgsc.bcm.edu	36	16	56245432	56245433	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
C17orf97	400566	hgsc.bcm.edu	36	17	263602	263631	+	Frame_Shift_Del	DEL	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
TSKS	60385	hgsc.bcm.edu	36	19	54941745	54941762	+	In_Frame_Del	DEL	CTGCTTCTCCTCCGGCTC	CTGCTTCTCCTCCGGCTC	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	CTGCTTCTCCTCCGGCTC	CTGCTTCTCCTCCGGCTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
CRLS1	54675	hgsc.bcm.edu	36	20	5963138	5963149	+	In_Frame_Del	DEL	TGGCAGCTTCTT	TGGCAGCTTCTT	-	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	TGGCAGCTTCTT	TGGCAGCTTCTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493
KRTAP10-6	386674	hgsc.bcm.edu	36	21	44836647	44836648	+	In_Frame_Ins	INS	-	-	GGGGCGCAGCAGCTG	novel	unknown	TCGA-AA-3660-01A-01D-1719-10	TCGA-AA-3660-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8332c3ea-b4c0-4b73-bb97-6c0bd3439b1c	00e3e512-f572-4dd1-961b-54c515d33493