Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID SP4 6671 hgsc.bcm.edu 36 7 21488154 21488154 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MGC87042 256227 hgsc.bcm.edu 36 7 22499519 22499519 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 STK31 56164 hgsc.bcm.edu 36 7 23794214 23794214 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FIGNL1 63979 hgsc.bcm.edu 36 7 50482427 50482427 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 AKAP9 10142 hgsc.bcm.edu 36 7 91512285 91512285 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TRRAP 8295 hgsc.bcm.edu 36 7 98400283 98400283 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SRPK2 6733 hgsc.bcm.edu 36 7 104570843 104570843 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 C7orf58 79974 hgsc.bcm.edu 36 7 120664097 120664097 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 C7orf58 79974 hgsc.bcm.edu 36 7 120693705 120693705 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CALD1 800 hgsc.bcm.edu 36 7 134264100 134264100 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 UBE3C 9690 hgsc.bcm.edu 36 7 156649271 156649271 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TTI1 0 hgsc.bcm.edu 36 20 36045371 36045371 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PLCG1 5335 hgsc.bcm.edu 36 20 39227377 39227377 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MYT1 9088 hgsc.bcm.edu 36 20 62342218 62342218 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF70 7621 hgsc.bcm.edu 36 22 22416467 22416467 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CCNB1IP1 57820 hgsc.bcm.edu 36 14 19851594 19851594 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FRMD6 122786 hgsc.bcm.edu 36 14 51248021 51248021 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KTN1 3895 hgsc.bcm.edu 36 14 55154450 55154450 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DHRS7 51635 hgsc.bcm.edu 36 14 59685861 59685861 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ALDH6A1 4329 hgsc.bcm.edu 36 14 73603870 73603870 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KIAA1409 57578 hgsc.bcm.edu 36 14 93179705 93179705 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MUC16 94025 hgsc.bcm.edu 36 19 8934805 8934805 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MUC16 94025 hgsc.bcm.edu 36 19 8938661 8938661 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LDLR 3949 hgsc.bcm.edu 36 19 11076910 11076910 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LPHN1 22859 hgsc.bcm.edu 36 19 14149365 14149365 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 JAK3 3718 hgsc.bcm.edu 36 19 17810109 17810109 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TSHZ3 57616 hgsc.bcm.edu 36 19 36460161 36460161 + Missense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PSG3 5671 hgsc.bcm.edu 36 19 47929003 47929003 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CEACAM20 125931 hgsc.bcm.edu 36 19 49719992 49719992 + Silent SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MARK4 57787 hgsc.bcm.edu 36 19 50475810 50475810 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LIG1 26018 hgsc.bcm.edu 36 19 53348953 53348953 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SHANK1 50944 hgsc.bcm.edu 36 19 55884037 55884037 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF649 65251 hgsc.bcm.edu 36 19 57086230 57086230 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NLRP12 91662 hgsc.bcm.edu 36 19 59005211 59005211 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FUT10 84750 hgsc.bcm.edu 36 8 33366291 33366291 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NCOA2 10499 hgsc.bcm.edu 36 8 71234337 71234337 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 JPH1 56704 hgsc.bcm.edu 36 8 75319449 75319449 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZFHX4 79776 hgsc.bcm.edu 36 8 77929746 77929746 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RUNX1T1 862 hgsc.bcm.edu 36 8 93067589 93067589 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FER1L6 654463 hgsc.bcm.edu 36 8 125037438 125037438 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FER1L6 654463 hgsc.bcm.edu 36 8 125131067 125131067 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 OC90 729330 hgsc.bcm.edu 36 8 133114485 133114485 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TG 7038 hgsc.bcm.edu 36 8 133968052 133968052 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZFP41 286128 hgsc.bcm.edu 36 8 144403826 144403826 + Silent SNP G G C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF7 7553 hgsc.bcm.edu 36 8 146025732 146025732 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 UBR4 23352 hgsc.bcm.edu 36 1 19363468 19363468 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PALMD 54873 hgsc.bcm.edu 36 1 99927004 99927004 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LRRC39 127495 hgsc.bcm.edu 36 1 100390658 100390658 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 VCAM1 7412 hgsc.bcm.edu 36 1 100961194 100961194 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SPAG17 200162 hgsc.bcm.edu 36 1 118431039 118431039 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NTRK1 4914 hgsc.bcm.edu 36 1 155117993 155117993 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FCRL3 115352 hgsc.bcm.edu 36 1 155932605 155932605 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CD1B 910 hgsc.bcm.edu 36 1 156565349 156565349 + Missense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CD1B 910 hgsc.bcm.edu 36 1 156565382 156565382 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SLAMF9 89886 hgsc.bcm.edu 36 1 158188871 158188871 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF648 127665 hgsc.bcm.edu 36 1 180293674 180293674 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ASPM 259266 hgsc.bcm.edu 36 1 195337699 195337699 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SERTAD4 56256 hgsc.bcm.edu 36 1 208479472 208479472 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PARP1 142 hgsc.bcm.edu 36 1 224631530 224631530 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LYST 1130 hgsc.bcm.edu 36 1 234004956 234004956 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF143 7702 hgsc.bcm.edu 36 11 9452677 9452677 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 IGSF22 283284 hgsc.bcm.edu 36 11 18693781 18693781 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 WT1 7490 hgsc.bcm.edu 36 11 32395733 32395733 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SSH3 54961 hgsc.bcm.edu 36 11 66829008 66829008 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 GRM5 2915 hgsc.bcm.edu 36 11 88222880 88222880 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FAT3 120114 hgsc.bcm.edu 36 11 92232077 92232077 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PGR 5241 hgsc.bcm.edu 36 11 100438633 100438633 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TRPC6 7225 hgsc.bcm.edu 36 11 100880100 100880100 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DYNC2H1 79659 hgsc.bcm.edu 36 11 102498933 102498933 + Missense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CASP5 838 hgsc.bcm.edu 36 11 104378116 104378116 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CASP1 834 hgsc.bcm.edu 36 11 104405080 104405080 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 UBE4A 9354 hgsc.bcm.edu 36 11 117755539 117755539 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DDX6 1656 hgsc.bcm.edu 36 11 118133163 118133163 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CBL 867 hgsc.bcm.edu 36 11 118654189 118654189 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ADAMTS8 11095 hgsc.bcm.edu 36 11 129783648 129783648 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MYLK4 340156 hgsc.bcm.edu 36 6 2694439 2694439 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 UHRF1BP1 54887 hgsc.bcm.edu 36 6 34911191 34911191 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 POLH 10721 hgsc.bcm.edu 36 6 43658072 43658072 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FAM83B 222584 hgsc.bcm.edu 36 6 54914496 54914496 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ELOVL4 6785 hgsc.bcm.edu 36 6 80688097 80688097 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DOPEY1 23033 hgsc.bcm.edu 36 6 83903944 83903944 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RRAGD 58528 hgsc.bcm.edu 36 6 90134615 90134615 + Missense_Mutation SNP C C G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TXLNB 167838 hgsc.bcm.edu 36 6 139605924 139605924 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 C6orf103 79747 hgsc.bcm.edu 36 6 146998308 146998308 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TSR1 55720 hgsc.bcm.edu 36 17 2184528 2184528 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TP53 7157 hgsc.bcm.edu 36 17 7520093 7520093 + Missense_Mutation SNP A A C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF286B 729288 hgsc.bcm.edu 36 17 18506786 18506786 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NF1 4763 hgsc.bcm.edu 36 17 26581463 26581463 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NF1 4763 hgsc.bcm.edu 36 17 26586818 26586818 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CCR7 1236 hgsc.bcm.edu 36 17 35965031 35965031 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KRT28 162605 hgsc.bcm.edu 36 17 36207039 36207039 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KPNA2 3838 hgsc.bcm.edu 36 17 63469686 63469686 + Nonsense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DNAH17 8632 hgsc.bcm.edu 36 17 74003684 74003684 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CSNK1D 1453 hgsc.bcm.edu 36 17 77806641 77806641 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 GRIK1 2897 hgsc.bcm.edu 36 21 29883199 29883199 + Missense_Mutation SNP T T A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PCBP3 54039 hgsc.bcm.edu 36 21 46184455 46184455 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PRSS8 5652 hgsc.bcm.edu 36 16 31050934 31050934 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CDH5 1003 hgsc.bcm.edu 36 16 64978237 64978237 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DPEP3 64180 hgsc.bcm.edu 36 16 66569389 66569389 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CDH1 51343 hgsc.bcm.edu 36 16 67419665 67419665 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PKD1L2 114780 hgsc.bcm.edu 36 16 79703337 79703337 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CBFA2T3 863 hgsc.bcm.edu 36 16 87473259 87473259 + Missense_Mutation SNP C C G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PTPRM 5797 hgsc.bcm.edu 36 18 7945390 7945390 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MIB1 57534 hgsc.bcm.edu 36 18 17632061 17632061 + Nonsense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CCBE1 147372 hgsc.bcm.edu 36 18 55254309 55254309 + Missense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 VHL 7428 hgsc.bcm.edu 36 3 10163285 10163285 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DLEC1 9940 hgsc.bcm.edu 36 3 38133032 38133032 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 BAP1 9223 hgsc.bcm.edu 36 3 52417118 52417118 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 IGSF11 152404 hgsc.bcm.edu 36 3 120106249 120106249 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KALRN 8997 hgsc.bcm.edu 36 3 125918905 125918905 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 COL6A6 131873 hgsc.bcm.edu 36 3 131772361 131772361 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PIK3CA 5290 hgsc.bcm.edu 36 3 180434584 180434584 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PIK3CA 5290 hgsc.bcm.edu 36 3 180434701 180434701 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 EIF2B5 8893 hgsc.bcm.edu 36 3 185344646 185344646 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LEPREL1 55214 hgsc.bcm.edu 36 3 191172414 191172414 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SLC6A13 6540 hgsc.bcm.edu 36 12 239337 239337 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RBP5 83758 hgsc.bcm.edu 36 12 7172153 7172153 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KIAA1467 57613 hgsc.bcm.edu 36 12 13110894 13110894 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ABCC9 10060 hgsc.bcm.edu 36 12 21978116 21978116 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LRRK2 120892 hgsc.bcm.edu 36 12 39002200 39002200 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MLL2 9757 hgsc.bcm.edu 36 12 47711525 47711525 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DIP2B 57609 hgsc.bcm.edu 36 12 49360789 49360789 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ATF7 11016 hgsc.bcm.edu 36 12 52214650 52214650 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PDE1B 5153 hgsc.bcm.edu 36 12 53252738 53252738 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZFC3H1 196441 hgsc.bcm.edu 36 12 70306469 70306469 + Silent SNP A A T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RAN 5901 hgsc.bcm.edu 36 12 129926236 129926236 + Missense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RYR3 6263 hgsc.bcm.edu 36 15 31739847 31739847 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PRTG 283659 hgsc.bcm.edu 36 15 53753077 53753077 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DAPK2 23604 hgsc.bcm.edu 36 15 62119452 62119452 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FRMPD4 9758 hgsc.bcm.edu 36 X 12622478 12622478 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ATXN3L 92552 hgsc.bcm.edu 36 X 13247539 13247539 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZFX 7543 hgsc.bcm.edu 36 X 24136298 24136298 + Missense_Mutation SNP T T A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TAB3 257397 hgsc.bcm.edu 36 X 30783150 30783150 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ATRX 546 hgsc.bcm.edu 36 X 76824683 76824683 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ODZ1 10178 hgsc.bcm.edu 36 X 123345253 123345253 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 OCRL 4952 hgsc.bcm.edu 36 X 128524125 128524125 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MST4 51765 hgsc.bcm.edu 36 X 131034721 131034721 + Missense_Mutation SNP A A C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZFYVE28 57732 hgsc.bcm.edu 36 4 2242333 2242333 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 GABRA4 2557 hgsc.bcm.edu 36 4 46625118 46625118 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KIT 3815 hgsc.bcm.edu 36 4 55290352 55290352 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 UGT2B17 7367 hgsc.bcm.edu 36 4 69116210 69116210 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 BMP2K 55589 hgsc.bcm.edu 36 4 79966238 79966238 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PCDH10 57575 hgsc.bcm.edu 36 4 134291564 134291564 + Missense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 GAB1 128869 hgsc.bcm.edu 36 4 144556256 144556256 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SH3YL1 26751 hgsc.bcm.edu 36 2 221085 221085 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 APOB 338 hgsc.bcm.edu 36 2 21079002 21079002 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 GTF3C2 2976 hgsc.bcm.edu 36 2 27405843 27405843 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CAPN14 440854 hgsc.bcm.edu 36 2 31269605 31269605 + Missense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MSH6 2956 hgsc.bcm.edu 36 2 47884135 47884135 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ANTXR1 84168 hgsc.bcm.edu 36 2 69151306 69151306 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 AFF3 3899 hgsc.bcm.edu 36 2 99541780 99541780 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 POTEF 728378 hgsc.bcm.edu 36 2 130594261 130594261 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LCT 3938 hgsc.bcm.edu 36 2 136286810 136286810 + Missense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 LRP1B 53353 hgsc.bcm.edu 36 2 141072766 141072766 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DYNC1I2 1781 hgsc.bcm.edu 36 2 172277532 172277532 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 HNRNPA3 220988 hgsc.bcm.edu 36 2 177790743 177790743 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TTN 7273 hgsc.bcm.edu 36 2 179140783 179140783 + Nonsense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TTN 7273 hgsc.bcm.edu 36 2 179180492 179180492 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PMS1 5378 hgsc.bcm.edu 36 2 190390993 190390993 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MFSD6 54842 hgsc.bcm.edu 36 2 191009653 191009653 + Missense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 JAK2 3717 hgsc.bcm.edu 36 9 5062561 5062561 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TRPM6 140803 hgsc.bcm.edu 36 9 76647007 76647007 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FAM75D1 0 hgsc.bcm.edu 36 9 83796370 83796370 + Missense_Mutation SNP T T A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NTRK2 4915 hgsc.bcm.edu 36 9 86529019 86529019 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 AGTPBP1 23287 hgsc.bcm.edu 36 9 87477343 87477343 + Missense_Mutation SNP C C A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PHF2 5253 hgsc.bcm.edu 36 9 95451286 95451286 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PTCH1 5727 hgsc.bcm.edu 36 9 97284091 97284091 + Nonsense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ADAMTSL2 9719 hgsc.bcm.edu 36 9 135391723 135391723 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SGCG 6445 hgsc.bcm.edu 36 13 22675927 22675927 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PAN3 255967 hgsc.bcm.edu 36 13 27669457 27669457 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PAN3 255967 hgsc.bcm.edu 36 13 27749445 27749445 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FLT1 2321 hgsc.bcm.edu 36 13 27817595 27817595 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KATNAL1 84056 hgsc.bcm.edu 36 13 29699608 29699608 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TRPC4 7223 hgsc.bcm.edu 36 13 37218390 37218390 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RB1 5925 hgsc.bcm.edu 36 13 47853551 47853551 + Nonsense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MYO16 23026 hgsc.bcm.edu 36 13 108116425 108116425 + Silent SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 COL4A2 1284 hgsc.bcm.edu 36 13 109958290 109958290 + Silent SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PTPLA 9200 hgsc.bcm.edu 36 10 17681412 17681412 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ACBD5 91452 hgsc.bcm.edu 36 10 27539859 27539859 + Missense_Mutation SNP T T A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RET 5979 hgsc.bcm.edu 36 10 42933845 42933845 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PTEN 5728 hgsc.bcm.edu 36 10 89643845 89643845 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 TCTN3 26123 hgsc.bcm.edu 36 10 97437096 97437096 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 NKX2-3 159296 hgsc.bcm.edu 36 10 101282982 101282982 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FGFR2 2263 hgsc.bcm.edu 36 10 123269665 123269665 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CDH10 1008 hgsc.bcm.edu 36 5 24547224 24547224 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CDH6 1004 hgsc.bcm.edu 36 5 31335410 31335410 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 C5orf42 65250 hgsc.bcm.edu 36 5 37234612 37234612 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RAB3C 115827 hgsc.bcm.edu 36 5 58057677 58057677 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 F2R 2149 hgsc.bcm.edu 36 5 76064685 76064685 + Silent SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RASGRF2 5924 hgsc.bcm.edu 36 5 80445145 80445145 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 APC 324 hgsc.bcm.edu 36 5 112201923 112201923 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 APC 324 hgsc.bcm.edu 36 5 112203033 112203033 + Silent SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 APC 324 hgsc.bcm.edu 36 5 112203154 112203154 + Nonsense_Mutation SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 APC 324 hgsc.bcm.edu 36 5 112203280 112203280 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 APC 324 hgsc.bcm.edu 36 5 112203851 112203851 + Missense_Mutation SNP A A G novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SPOCK1 6695 hgsc.bcm.edu 36 5 136504219 136504219 + Missense_Mutation SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DNAJC18 202052 hgsc.bcm.edu 36 5 138801137 138801137 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PCDHB8 56128 hgsc.bcm.edu 36 5 140539396 140539396 + Missense_Mutation SNP G G A rs2697532 unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PCDHGB2 56103 hgsc.bcm.edu 36 5 140720654 140720654 + Silent SNP G G A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PCDHGA9 56107 hgsc.bcm.edu 36 5 140764042 140764042 + Missense_Mutation SNP G G C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PCDH12 51294 hgsc.bcm.edu 36 5 141311246 141311246 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CCDC69 26112 hgsc.bcm.edu 36 5 150561404 150561404 + Silent SNP G G T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 SLC36A3 285641 hgsc.bcm.edu 36 5 150637296 150637296 + Nonsense_Mutation SNP C C A rs13155272 byHapMap TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 FAM71B 153745 hgsc.bcm.edu 36 5 156522678 156522678 + Silent SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 DBN1 1627 hgsc.bcm.edu 36 5 176820161 176820161 + Missense_Mutation SNP T T C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CLK4 57396 hgsc.bcm.edu 36 5 177983019 177983019 + Missense_Mutation SNP C C T novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 MYL1 4632 hgsc.bcm.edu 36 2 210887962 210887963 + Frame_Shift_Ins INS - - C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 HTR4 3360 hgsc.bcm.edu 36 5 147825675 147825676 + Frame_Shift_Ins INS - - C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 HMGXB3 22993 hgsc.bcm.edu 36 5 149408427 149408428 + In_Frame_Ins INS - - TGTGCC novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 RNF145 153830 hgsc.bcm.edu 36 5 158563220 158563220 + Frame_Shift_Del DEL T T - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 C6orf62 81688 hgsc.bcm.edu 36 6 24826810 24826813 + Frame_Shift_Del DEL TTTC TTTC - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 TTTC TTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 KCND2 3751 hgsc.bcm.edu 36 7 119702832 119702833 + Frame_Shift_Ins INS - - C novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 PTAR1 375743 hgsc.bcm.edu 36 9 71555533 71555533 + Frame_Shift_Del DEL T T - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 OGDHL 55753 hgsc.bcm.edu 36 10 50613376 50613385 + Frame_Shift_Del DEL TGCAGCCGCT TGCAGCCGCT - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 TGCAGCCGCT TGCAGCCGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 CS 1431 hgsc.bcm.edu 36 12 54953146 54953147 + Frame_Shift_Del INS - - A novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 ZNF761 388561 hgsc.bcm.edu 36 19 58644698 58644698 + Frame_Shift_Del DEL C C - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 C22orf39 128977 hgsc.bcm.edu 36 22 17815243 17815250 + Frame_Shift_Del DEL TCAGTCCG TCAGTCCG - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 TCAGTCCG TCAGTCCG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 GGT1 2678 hgsc.bcm.edu 36 22 23353869 23353869 + Frame_Shift_Del DEL A A - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1 STAG2 10735 hgsc.bcm.edu 36 X 123045070 123045070 + Frame_Shift_Del DEL A A - novel unknown TCGA-A6-5662-01A-01D-1650-10 TCGA-A6-5662-10A-01D-1650-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq cd7d0c14-2469-4303-b044-7050b90d407e daa86bb5-1953-4e91-9402-351bfbbd5ad1