Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target ABCC2 1244 broad.mit.edu 36 10 101580541 101580541 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000392 exon21 c.C2826T p.D942D . . . PKD2L1 9033 broad.mit.edu 36 10 102044389 102044389 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016112 exon9 c.C1552T p.R518W . . . DPCD 25911 broad.mit.edu 36 10 103358661 103358661 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015448 exon5 c.G484A p.A162T . . . FGF8 2253 broad.mit.edu 36 10 103524491 103524491 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033165 exon3 c.G205A p.G69S . . . PPRC1 23082 broad.mit.edu 36 10 103897136 103897136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015062 exon9 c.G4397A p.R1466Q . . . NOLC1 9221 broad.mit.edu 36 10 103910352 103910352 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004741 exon10 c.C1253T p.T418M . . . GBF1 8729 broad.mit.edu 36 10 104129284 104129284 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199378 exon35 c.C4650T p.C1550C . . . CUEDC2 79004 broad.mit.edu 36 10 104173282 104173282 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024040 exon9 c.T755C p.V252A . . . TMEM180 79847 broad.mit.edu 36 10 104220790 104220790 + Silent SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024789 exon5 c.C630A p.A210A . . . C10orf26 54838 broad.mit.edu 36 10 104562917 104562917 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017787 exon4 c.C868T p.R290W . . . ADRA2A 150 broad.mit.edu 36 10 112828865 112828865 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000681 exon1 c.C1121T p.A374V . . . C10orf81 79949 broad.mit.edu 36 10 115530368 115530368 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193435 exon11 c.C939T p.I313I . . . NHLRC2 374354 broad.mit.edu 36 10 115608343 115608343 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198514 exon2 c.T245C p.V82A . . . TDRD1 56165 broad.mit.edu 36 10 115976870 115976870 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198795 exon23 c.A3225T p.L1075F . . . VWA2 340706 broad.mit.edu 36 10 116035761 116035761 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198496 exon11 c.C1071T p.D357D . . . HSPA12A 259217 broad.mit.edu 36 10 118424709 118424709 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025015 exon12 c.C1601T p.P534L . . . HSPA12A 259217 broad.mit.edu 36 10 118431305 118431305 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025015 exon8 c.C909T p.S303S . . . KCNK18 338567 broad.mit.edu 36 10 118959166 118959166 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181840 exon3 c.G521A p.R174H . . . INPP5F 22876 broad.mit.edu 36 10 121559635 121559635 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014937 exon14 c.G1603A p.A535T . . . DMBT1 1755 broad.mit.edu 36 10 124351378 124351378 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_007329 exon29 c.G3419A p.R1140Q . . . ADAM12 8038 broad.mit.edu 36 10 127779778 127779778 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021641 exon9 c.G773A p.R258Q . . . PTPRE 5791 broad.mit.edu 36 10 129759102 129759102 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130435 exon12 c.C1160T p.T387M . . . TCERG1L 256536 broad.mit.edu 36 10 132792552 132792552 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174937 exon10 c.G1451A p.R484H . . . TCERG1L 256536 broad.mit.edu 36 10 132834872 132834872 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174937 exon7 c.A1076T p.N359I . . . JAKMIP3 282973 broad.mit.edu 36 10 133811485 133811485 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105521 exon13 c.G1789A p.E597K . . . KNDC1 85442 broad.mit.edu 36 10 134882412 134882412 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152643 exon27 c.A4765G p.S1589G . . . TUBGCP2 10844 broad.mit.edu 36 10 134956702 134956702 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006659 exon7 c.C855T p.Y285Y . . . PRAP1 118471 broad.mit.edu 36 10 135015609 135015609 + Splice_Site SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145202 exon4 c.T237C p.G79G . . . CUBN 8029 broad.mit.edu 36 10 17029314 17029314 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon36 c.C5268A p.D1756E . . . C10orf140 387640 broad.mit.edu 36 10 21844085 21844085 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207371 exon4 c.C2673T p.G891G . . . GPR158 57512 broad.mit.edu 36 10 25927783 25927783 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020752 exon11 c.G3222A p.W1074X . . . ARMC4 55130 broad.mit.edu 36 10 28236637 28236637 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018076 exon17 c.C2571T p.S857S . . . ZEB1 6935 broad.mit.edu 36 10 31850812 31850812 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174093 exon6 c.C2483T p.T828M . . . ARHGAP12 94134 broad.mit.edu 36 10 32237267 32237267 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018287 exon3 c.C523T p.R175C . . . PARD3 56288 broad.mit.edu 36 10 34670671 34670671 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184787 exon16 c.T2307C p.L769L . . . ZNF33B 7582 broad.mit.edu 36 10 42409367 42409367 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006955 exon5 c.G1037A p.R346Q . . . BMS1 9790 broad.mit.edu 36 10 42608519 42608519 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014753 exon8 c.C1010T p.A337V . . . C10orf25 220979 broad.mit.edu 36 10 44816209 44816209 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039380 exon1 c.C105A p.S35R . . . AKR1E2 83592 broad.mit.edu 36 10 4867927 4867927 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040177 exon4 c.C385T p.R129X . . . C10orf72 196740 broad.mit.edu 36 10 49955346 49955346 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031746 exon4 c.C558T p.C186C . . . NCOA4 8031 broad.mit.edu 36 10 51249217 51249217 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145261 exon3 c.C118T p.R40W . . . AKR1C4 1109 broad.mit.edu 36 10 5245064 5245064 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001818 exon7 c.G788A p.R263H . . . FBXO18 84893 broad.mit.edu 36 10 5997390 5997390 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032807 exon10 c.C1568T p.T523M . . . FAM13C 220965 broad.mit.edu 36 10 60698440 60698440 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143773 exon9 c.G572A p.R191H . . . CCDC6 8030 broad.mit.edu 36 10 61236694 61236694 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005436 exon6 c.C996T p.D332D . . . ANK3 288 broad.mit.edu 36 10 61499896 61499896 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020987 exon37 c.G10749A p.T3583T . . . ANK3 288 broad.mit.edu 36 10 61512398 61512398 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020987 exon34 c.C4304A p.T1435N . . . ANK3 288 broad.mit.edu 36 10 61629904 61629904 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020987 exon13 c.G1480T p.A494S . . . RBM17 84991 broad.mit.edu 36 10 6194297 6194297 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032905 exon8 c.G823A p.G275S . . . RHOBTB1 9886 broad.mit.edu 36 10 62341295 62341295 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014836 exon3 c.C12T p.D4D . . . SFMBT2 57713 broad.mit.edu 36 10 7309828 7309828 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001029880 exon10 c.C1198T p.R400X . . . CDH23 64072 broad.mit.edu 36 10 73125231 73125231 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022124 exon21 c.C2340T p.D780D . . . CDH23 64072 broad.mit.edu 36 10 73223367 73223367 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022124 exon46 c.A6676G p.N2226D . . . CDH23 64072 broad.mit.edu 36 10 73237280 73237280 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171933 exon12 c.C1590T p.A530A . . . SFMBT2 57713 broad.mit.edu 36 10 7449789 7449789 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029880 exon4 c.G264A p.P88P . . . PPP3CB 5532 broad.mit.edu 36 10 74868063 74868063 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142353 exon14 c.T1521C p.S507S . . . SYNPO2L 79933 broad.mit.edu 36 10 75076865 75076865 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024875 exon2 c.C1879T p.R627W . . . MYST4 23522 broad.mit.edu 36 10 76459775 76459775 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012330 exon18 c.C5187T p.S1729S . . . ITIH2 3698 broad.mit.edu 36 10 7805509 7805509 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002216 exon9 c.C957T p.G319G . . . KCNMA1 3778 broad.mit.edu 36 10 78321313 78321313 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161353 exon26 c.C3267T p.L1089L . . . C10orf58 84293 broad.mit.edu 36 10 82170323 82170323 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032333 exon2 c.G120A p.K40K . . . CDHR1 92211 broad.mit.edu 36 10 85952803 85952803 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171971 exon8 c.G727T p.A243S . . . GRID1 2894 broad.mit.edu 36 10 87397068 87397068 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017551 exon13 c.T2064C p.Y688Y . . . LIPN 643418 broad.mit.edu 36 10 90524213 90524213 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102469 exon7 c.C823T p.R275X . . . LIPN 643418 broad.mit.edu 36 10 90527789 90527789 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102469 exon9 c.C1007T p.T336I . . . HECTD2 143279 broad.mit.edu 36 10 93242193 93242193 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182765 exon13 c.A1404G p.L468L . . . SORBS1 10580 broad.mit.edu 36 10 97182268 97182268 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034957 exon3 c.G132A p.S44S . . . ALDH18A1 5832 broad.mit.edu 36 10 97356604 97356604 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017423 exon18 c.C2287T p.R763X . . . SLIT1 6585 broad.mit.edu 36 10 98813266 98813266 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003061 exon8 c.G729A p.S243S . . . ZDHHC16 84287 broad.mit.edu 36 10 99206537 99206537 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198043 exon10 c.C985T p.R329W . . . AVPI1 60370 broad.mit.edu 36 10 99429492 99429492 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021732 exon2 c.G161A p.R54Q . . . FAM21B 55747 broad.mit.edu 36 10 47461992 47461992 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018232 exon24 c.2449delA p.K817fs . . . TRPC6 7225 broad.mit.edu 36 11 100880386 100880386 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004621 exon2 c.G524A p.R175Q . . . DYNC2H1 79659 broad.mit.edu 36 11 102491133 102491133 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon4 c.G520A p.D174N . . . DYNC2H1 79659 broad.mit.edu 36 11 102575387 102575387 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon49 c.T8060C p.L2687P . . . DDI1 414301 broad.mit.edu 36 11 103413584 103413584 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001711 exon1 c.G824A p.R275Q . . . ATM 472 broad.mit.edu 36 11 107723246 107723246 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon59 c.A8615G p.H2872R . . . EXPH5 23086 broad.mit.edu 36 11 107887688 107887688 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015065 exon6 c.A3756G p.I1252M . . . C11orf87 399947 broad.mit.edu 36 11 108800063 108800063 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207645 exon2 c.C494T p.P165L . . . HTR3A 3359 broad.mit.edu 36 11 113353816 113353816 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000869 exon2 c.G199A p.V67I . . . CEP164 22897 broad.mit.edu 36 11 116770399 116770399 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014956 exon21 c.C2740T p.R914W . . . BCL9L 283149 broad.mit.edu 36 11 118278595 118278595 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182557 exon6 c.C1067T p.P356L . . . BCL9L 283149 broad.mit.edu 36 11 118279186 118279186 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182557 exon4 c.G718A p.V240I . . . PVRL1 5818 broad.mit.edu 36 11 119040675 119040675 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002855 exon6 c.T1546C p.Y516H . . . GRIK4 2900 broad.mit.edu 36 11 120250080 120250080 + Silent SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014619 exon8 c.C1002A p.S334S . . . SORL1 6653 broad.mit.edu 36 11 120984083 120984083 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003105 exon38 c.A5227T p.I1743L . . . MUC5B 727897 broad.mit.edu 36 11 1217725 1217725 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002458 exon28 c.C3704A p.P1235H . . . C11orf63 79864 broad.mit.edu 36 11 122262072 122262072 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024806 exon2 c.A305T p.E102V . . . ASAM 79827 broad.mit.edu 36 11 122449485 122449485 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024769 exon7 c.T1029C p.S343S . . . ASAM 79827 broad.mit.edu 36 11 122449666 122449666 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024769 exon7 c.G848A p.R283H . . . IGSF9B 22997 broad.mit.edu 36 11 133307198 133307198 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014987 exon8 c.G1088A p.G363D . . . ACAD8 27034 broad.mit.edu 36 11 133632269 133632269 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014384 exon3 c.C288T p.G96G . . . PDE3B 5140 broad.mit.edu 36 11 14822133 14822133 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000922 exon12 c.T2505C p.A835A . . . PLEKHA7 144100 broad.mit.edu 36 11 16769211 16769211 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175058 exon20 c.G2857A p.V953M . . . NELL1 4745 broad.mit.edu 36 11 21349064 21349064 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006157 exon15 c.G1639A p.E547K . . . LGR4 55366 broad.mit.edu 36 11 27363557 27363557 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018490 exon5 c.G436A p.E146K . . . KCNA4 3739 broad.mit.edu 36 11 29990128 29990128 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002233 exon2 c.G674A p.R225H . . . OSBPL5 114879 broad.mit.edu 36 11 3085631 3085631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145638 exon7 c.C608T p.S203L . . . IMMP1L 196294 broad.mit.edu 36 11 31411649 31411649 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144981 exon6 c.T366A p.N122K . . . CAPRIN1 4076 broad.mit.edu 36 11 34054582 34054582 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203364 exon5 c.G590A p.R197Q . . . PAMR1 25891 broad.mit.edu 36 11 35414251 35414251 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001991 exon9 c.C1109T p.P370L . . . NUP98 4928 broad.mit.edu 36 11 3673320 3673320 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139132 exon26 c.C4102A p.L1368I . . . ACCS 84680 broad.mit.edu 36 11 44061616 44061616 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032592 exon14 c.C1321A p.L441M . . . PRDM11 56981 broad.mit.edu 36 11 45202620 45202620 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020229 exon8 c.A1121C p.D374A . . . CHST1 8534 broad.mit.edu 36 11 45628269 45628269 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003654 exon4 c.G781A p.G261R . . . OR52I2 143502 broad.mit.edu 36 11 4564915 4564915 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005170 exon1 c.G297T p.V99V . . . DGKZ 8525 broad.mit.edu 36 11 46349633 46349633 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003646 exon8 c.C663T p.C221C . . . AMBRA1 55626 broad.mit.edu 36 11 46521075 46521075 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017749 exon8 c.G798A p.S266S . . . OR51E2 81285 broad.mit.edu 36 11 4660147 4660147 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030774 exon2 c.C371T p.A124V . . . PTPMT1 114971 broad.mit.edu 36 11 47549657 47549657 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143984 exon2 c.T423A p.H141Q . . . OR52R1 119695 broad.mit.edu 36 11 4781329 4781329 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005177 exon1 c.A858G p.I286M . . . OR51V1 283111 broad.mit.edu 36 11 5177669 5177669 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004760 exon1 c.G838A p.V280M . . . OR52H1 390067 broad.mit.edu 36 11 5522708 5522708 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005289 exon1 c.T622C p.F208L . . . SPRYD5 84767 broad.mit.edu 36 11 55413994 55413994 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032681 exon6 c.G762A p.R254R . . . OR8K5 219453 broad.mit.edu 36 11 55683938 55683938 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004058 exon1 c.G432A p.L144L . . . OR8H1 219469 broad.mit.edu 36 11 55815071 55815071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005199 exon1 c.C44T p.T15M . . . CTNND1 1500 broad.mit.edu 36 11 57318120 57318120 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001331 exon4 c.C258T p.N86N . . . ZFP91 80829 broad.mit.edu 36 11 58134013 58134013 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053023 exon3 c.C505T p.R169X . . . SDHAF2 54949 broad.mit.edu 36 11 60970078 60970078 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017841 exon4 c.C460T p.R154C . . . AHNAK 79026 broad.mit.edu 36 11 62046429 62046429 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.C12036A p.G4012G . . . AHNAK 79026 broad.mit.edu 36 11 62054972 62054972 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.G3493A p.E1165K . . . TAF6L 10629 broad.mit.edu 36 11 62302026 62302026 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006473 exon4 c.G235A p.A79T . . . NXF1 10482 broad.mit.edu 36 11 62324522 62324522 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006362 exon10 c.C919T p.R307W . . . SLC22A6 9356 broad.mit.edu 36 11 62501253 62501253 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004790 exon9 c.C1544T p.T515M . . . STIP1 10963 broad.mit.edu 36 11 63727573 63727573 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006819 exon13 c.C1462T p.R488X . . . HPX 3263 broad.mit.edu 36 11 6418701 6418701 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000613 exon1 c.C69A p.A23A . . . ATG2A 23130 broad.mit.edu 36 11 64426205 64426205 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015104 exon29 c.G3924A p.A1308A . . . ATG2A 23130 broad.mit.edu 36 11 64441046 64441046 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015104 exon1 c.C138A p.S46R . . . NAALADL1 10004 broad.mit.edu 36 11 64581434 64581434 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005468 exon4 c.A588G p.V196V . . . DPF2 5977 broad.mit.edu 36 11 64868058 64868058 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006268 exon6 c.C579T p.A193A . . . DNHD1 144132 broad.mit.edu 36 11 6489201 6489201 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144666 exon7 c.G1358A p.R453H . . . EFEMP2 30008 broad.mit.edu 36 11 65395339 65395339 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016938 exon4 c.T232C p.Y78H . . . FIBP 9158 broad.mit.edu 36 11 65409036 65409036 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004214 exon7 c.C765T p.C255C . . . PACS1 55690 broad.mit.edu 36 11 65757035 65757035 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018026 exon15 c.G1760A p.R587Q . . . KLC2 64837 broad.mit.edu 36 11 65786956 65786956 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134775 exon5 c.G625A p.A209T . . . KLC2 64837 broad.mit.edu 36 11 65787083 65787083 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134775 exon5 c.G752A p.R251Q . . . RAB1B 81876 broad.mit.edu 36 11 65800193 65800193 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030981 exon6 c.C514T p.R172W . . . PELI3 246330 broad.mit.edu 36 11 65995383 65995383 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145065 exon4 c.G319A p.V107I . . . PELI3 246330 broad.mit.edu 36 11 65997787 65997787 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145065 exon7 c.C655T p.R219X . . . DCHS1 8642 broad.mit.edu 36 11 6606549 6606549 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003737 exon13 c.C5250A p.T1750T . . . PC 5091 broad.mit.edu 36 11 66376563 66376563 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040716 exon15 c.G1748A p.R583H . . . DEAF1 10522 broad.mit.edu 36 11 664719 664719 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021008 exon10 c.G1320A p.A440A . . . KDM2A 22992 broad.mit.edu 36 11 66769436 66769436 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012308 exon14 c.C1764T p.C588C . . . CHKA 1119 broad.mit.edu 36 11 67594269 67594269 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212469 exon5 c.C778T p.L260F . . . SUV420H1 51111 broad.mit.edu 36 11 67682130 67682130 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017635 exon11 c.C2259T p.N753N . . . LRP5 4041 broad.mit.edu 36 11 67957707 67957707 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002335 exon18 c.C3825T p.P1275P . . . IGHMBP2 3508 broad.mit.edu 36 11 68439011 68439011 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002180 exon6 c.C856T p.R286W . . . ZNF214 7761 broad.mit.edu 36 11 6978153 6978153 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013249 exon3 c.A1337G p.D446G . . . NLRP14 338323 broad.mit.edu 36 11 7024486 7024486 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176822 exon5 c.G1970A p.R657H . . . ARAP1 116985 broad.mit.edu 36 11 72091750 72091750 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040118 exon15 c.C2015T p.T672I . . . ARAP1 116985 broad.mit.edu 36 11 72099116 72099116 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040118 exon10 c.G1378A p.V460M . . . ARAP1 116985 broad.mit.edu 36 11 72099832 72099832 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040118 exon9 c.C1095T p.D365D . . . ATG16L2 89849 broad.mit.edu 36 11 72217578 72217578 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033388 exon17 c.C1673T p.P558L . . . P2RY2 5029 broad.mit.edu 36 11 72623382 72623382 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176072 exon3 c.G530A p.R177H . . . RAB6A 5870 broad.mit.edu 36 11 73066646 73066646 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198896 exon8 c.T572C p.I191T . . . PPME1 51400 broad.mit.edu 36 11 73593137 73593137 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016147 exon3 c.C287T p.T96M . . . PPME1 51400 broad.mit.edu 36 11 73634832 73634832 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016147 exon10 c.G898A p.G300S . . . ARRB1 408 broad.mit.edu 36 11 74662826 74662826 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020251 exon11 c.G854A p.R285Q . . . PRKRIR 5612 broad.mit.edu 36 11 75741186 75741186 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004705 exon5 c.G656A p.R219Q . . . CAPN5 726 broad.mit.edu 36 11 76511318 76511318 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004055 exon12 c.C1652T p.S551L . . . THRSP 7069 broad.mit.edu 36 11 77452803 77452803 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003251 exon1 c.G228A p.P76P . . . ODZ4 26011 broad.mit.edu 36 11 78058242 78058242 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098816 exon32 c.G6796A p.G2266S . . . TUB 7275 broad.mit.edu 36 11 8078668 8078668 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177972 exon10 c.G1159A p.V387M . . . PCF11 51585 broad.mit.edu 36 11 82552518 82552518 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015885 exon3 c.G468A p.T156T . . . NOX4 50507 broad.mit.edu 36 11 88746259 88746259 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016931 exon12 c.G1124A p.G375E . . . NOX4 50507 broad.mit.edu 36 11 88824659 88824659 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016931 exon3 c.G206T p.S69I . . . MTNR1B 4544 broad.mit.edu 36 11 92354623 92354623 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005959 exon2 c.G586A p.A196T . . . IPO7 10527 broad.mit.edu 36 11 9388204 9388204 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006391 exon4 c.T474A p.N158K . . . CNTN5 53942 broad.mit.edu 36 11 99569464 99569464 + Silent SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175566 exon14 c.A1521C p.T507T . . . RELA 5970 broad.mit.edu 36 11 65178548 65178548 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021975 exon11 c.1533delC p.P511fs . . . MYBPC1 4604 broad.mit.edu 36 12 100549992 100549992 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002465 exon8 c.C501T p.C167C . . . OLR1 4973 broad.mit.edu 36 12 10204270 10204270 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002543 exon5 c.G623A p.R208Q . . . NUAK1 9891 broad.mit.edu 36 12 105004668 105004668 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014840 exon3 c.G487A p.V163I . . . CKAP4 10970 broad.mit.edu 36 12 105157553 105157553 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006825 exon2 c.G1188A p.S396S . . . STYK1 55359 broad.mit.edu 36 12 10664188 10664188 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018423 exon11 c.G1091A p.R364H . . . ACACB 32 broad.mit.edu 36 12 108089087 108089087 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093 exon2 c.G692A p.R231Q . . . ACACB 32 broad.mit.edu 36 12 108176421 108176421 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093 exon43 c.C6065A p.P2022H . . . ACACB 32 broad.mit.edu 36 12 108182677 108182677 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093 exon47 c.A6506G p.D2169G . . . HVCN1 84329 broad.mit.edu 36 12 109573496 109573496 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032369 exon6 c.C552T p.L184L . . . C12orf51 283450 broad.mit.edu 36 12 111094892 111094892 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001109662 exon66 c.G11235A p.A3745A . . . SDS 10993 broad.mit.edu 36 12 112319438 112319438 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006843 exon6 c.G568A p.V190I . . . SDSL 113675 broad.mit.edu 36 12 112350291 112350291 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138432 exon3 c.G121A p.V41M . . . FBXO21 23014 broad.mit.edu 36 12 116099805 116099805 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015002 exon4 c.C495T p.Y165Y . . . KSR2 283455 broad.mit.edu 36 12 116480728 116480728 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173598 exon8 c.C1272T p.A424A . . . VSIG10 54621 broad.mit.edu 36 12 116990679 116990679 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019086 exon8 c.C1453T p.R485C . . . SRRM4 84530 broad.mit.edu 36 12 118047598 118047598 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194286 exon7 c.G545A p.R182H . . . BCL7A 605 broad.mit.edu 36 12 120953051 120953051 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020993 exon2 c.C155T p.T52M . . . IL31 386653 broad.mit.edu 36 12 121224421 121224421 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014336 exon2 c.C88T p.R30C . . . LRRC43 254050 broad.mit.edu 36 12 121241959 121241959 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098519 exon6 c.G981A p.P327P . . . VPS33A 65082 broad.mit.edu 36 12 121301489 121301489 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022916 exon5 c.C594T p.C198C . . . LRP6 4040 broad.mit.edu 36 12 12193273 12193273 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002336 exon14 c.C3076T p.R1026C . . . ABCB9 23457 broad.mit.edu 36 12 121985898 121985898 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019624 exon9 c.G1648A p.A550T . . . MPHOSPH9 10198 broad.mit.edu 36 12 122253220 122253220 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022782 exon6 c.C1229T p.S410L . . . C12orf65 91574 broad.mit.edu 36 12 122304441 122304441 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194995 exon2 c.A267G p.S89S . . . SETD8 387893 broad.mit.edu 36 12 122441196 122441196 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020382 exon3 c.C199T p.R67C . . . SETD8 387893 broad.mit.edu 36 12 122455424 122455424 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020382 exon7 c.C698T p.T233I . . . DHX37 57647 broad.mit.edu 36 12 124025965 124025965 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032656 exon6 c.C933T p.A311A . . . SLC15A4 121260 broad.mit.edu 36 12 127844734 127844734 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145648 exon8 c.G1694A p.R565Q . . . TMEM132D 121256 broad.mit.edu 36 12 128751005 128751005 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133448 exon2 c.C271T p.P91S . . . GPRC5A 9052 broad.mit.edu 36 12 12952538 12952538 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003979 exon2 c.G88A p.V30I . . . STX2 2054 broad.mit.edu 36 12 129857515 129857515 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194356 exon6 c.G428A p.R143Q . . . SFSWAP 6433 broad.mit.edu 36 12 130770028 130770028 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004592 exon4 c.C597T p.D199D . . . MMP17 4326 broad.mit.edu 36 12 130891152 130891152 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016155 exon4 c.C504T p.S168S . . . EP400 57634 broad.mit.edu 36 12 131011145 131011145 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015409 exon2 c.G28A p.V10I . . . ATF7IP 55729 broad.mit.edu 36 12 14468184 14468184 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018179 exon2 c.G68A p.R23H . . . FBXL14 144699 broad.mit.edu 36 12 1572733 1572733 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152441 exon1 c.G761A p.S254N . . . RERGL 79785 broad.mit.edu 36 12 18128730 18128730 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024730 exon5 c.G323A p.S108N . . . SLC6A13 6540 broad.mit.edu 36 12 202007 202007 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190997 exon11 c.G1191T p.W397C . . . LST-3TM12 338821 broad.mit.edu 36 12 21087748 21087748 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009562 exon6 c.G800A p.R267Q . . . LST-3TM12 338821 broad.mit.edu 36 12 21092973 21092973 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009562 exon8 c.A1055G p.K352R . . . SLCO1B1 10599 broad.mit.edu 36 12 21268937 21268937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006446 exon14 c.C1762T p.P588S . . . KCNJ8 3764 broad.mit.edu 36 12 21810391 21810391 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004982 exon3 c.G808A p.V270M . . . KRAS 3845 broad.mit.edu 36 12 25289548 25289548 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004985 exon2 c.G38A p.G13D KRAS,lung,NS,Substitution - Missense,-1 . . C12orf71 728858 broad.mit.edu 36 12 27126478 27126478 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080406 exon1 c.G206A p.R69H . . . SLC38A1 81539 broad.mit.edu 36 12 44878727 44878727 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077484 exon14 c.G1070T p.R357L . . . AKAP3 10566 broad.mit.edu 36 12 4606434 4606434 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006422 exon4 c.C1895T p.P632L . . . RAPGEF3 10411 broad.mit.edu 36 12 46417640 46417640 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098532 exon27 c.C2623A p.L875I . . . HDAC7 51564 broad.mit.edu 36 12 46478905 46478905 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098416 exon3 c.G188A p.R63H . . . WNT10B 7480 broad.mit.edu 36 12 47646412 47646412 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003394 exon5 c.C903A p.P301P . . . WNT10B 7480 broad.mit.edu 36 12 47646483 47646483 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003394 exon5 c.C832T p.R278W . . . MLL2 8085 broad.mit.edu 36 12 47713534 47713534 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003482 exon39 c.C11221T p.Q3741X . . . MLL2 8085 broad.mit.edu 36 12 47734147 47734147 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003482 exon5 c.G554A p.R185H . . . BCDIN3D 144233 broad.mit.edu 36 12 48518891 48518891 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181708 exon2 c.A409G p.M137V . . . FAIM2 23017 broad.mit.edu 36 12 48570738 48570738 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012306 exon7 c.G520A p.V174I . . . RACGAP1 29127 broad.mit.edu 36 12 48686500 48686500 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013277 exon5 c.C272A p.A91D . . . GALNT6 11226 broad.mit.edu 36 12 50040790 50040790 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007210 exon7 c.C1149T p.N383N . . . ACVR1B 91 broad.mit.edu 36 12 50664187 50664187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020327 exon5 c.C793T p.H265Y . . . KRT85 3891 broad.mit.edu 36 12 51045036 51045036 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002283 exon2 c.G606T p.E202D . . . KRT82 3888 broad.mit.edu 36 12 51085935 51085935 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033033 exon1 c.G394A p.A132T . . . KRT71 112802 broad.mit.edu 36 12 51227995 51227995 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033448 exon6 c.C1017T p.D339D . . . KRT71 112802 broad.mit.edu 36 12 51233121 51233121 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033448 exon1 c.G8A p.R3H . . . KRT79 338785 broad.mit.edu 36 12 51503170 51503170 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175834 exon7 c.C1264A p.L422M . . . TARBP2 6895 broad.mit.edu 36 12 52184843 52184843 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004178 exon6 c.G527A p.R176Q . . . HOXC4 3221 broad.mit.edu 36 12 52734207 52734207 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014620 exon3 c.G234A p.S78S . . . NFE2 4778 broad.mit.edu 36 12 52972753 52972753 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136023 exon3 c.C794T p.A265V . . . MMP19 4327 broad.mit.edu 36 12 54519598 54519598 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002429 exon5 c.C715T p.P239S . . . BAZ2A 11176 broad.mit.edu 36 12 55285911 55285911 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013449 exon13 c.G2469A p.P823P . . . NAB2 4665 broad.mit.edu 36 12 55772999 55772999 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005967 exon4 c.T1124C p.L375P . . . GLI1 2735 broad.mit.edu 36 12 56147475 56147475 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160045 exon7 c.C621T p.H207H . . . MBD6 114785 broad.mit.edu 36 12 56206118 56206118 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052897 exon6 c.G1100A p.R367H . . . KIF5A 3798 broad.mit.edu 36 12 56252716 56252716 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004984 exon15 c.C1656T p.N552N . . . OS9 10956 broad.mit.edu 36 12 56400872 56400872 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017958 exon15 c.G1872A p.R624R . . . FAM119B 25895 broad.mit.edu 36 12 56460522 56460522 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015433 exon3 c.G507A p.L169L . . . PPM1H 57460 broad.mit.edu 36 12 61328651 61328651 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020700 exon10 c.G1430A p.R477H . . . CD9 928 broad.mit.edu 36 12 6217232 6217232 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001769 exon8 c.C664T p.R222C . . . SRGAP1 57522 broad.mit.edu 36 12 62807724 62807724 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020762 exon20 c.G2493T p.K831N . . . TBK1 29110 broad.mit.edu 36 12 63160144 63160144 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013254 exon7 c.A787G p.M263V . . . DYRK2 8445 broad.mit.edu 36 12 66338007 66338007 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003583 exon2 c.C834T p.P278P . . . KCNMB4 27345 broad.mit.edu 36 12 69080308 69080308 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014505 exon2 c.T389G p.V130G . . . C1RL 51279 broad.mit.edu 36 12 7140786 7140786 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016546 exon6 c.C807T p.G269G . . . CLSTN3 9746 broad.mit.edu 36 12 7187074 7187074 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014718 exon12 c.G1747A p.V583M . . . PEX5 5830 broad.mit.edu 36 12 7242968 7242968 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001131024 exon6 c.C543T p.T181T . . . KCNC2 3747 broad.mit.edu 36 12 73887671 73887671 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139137 exon2 c.C360T p.T120T . . . OSBPL8 114882 broad.mit.edu 36 12 75310568 75310568 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020841 exon10 c.G853A p.V285I . . . E2F7 144455 broad.mit.edu 36 12 75947805 75947805 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203394 exon10 c.G1821A p.E607E . . . NAV3 89795 broad.mit.edu 36 12 76968789 76968789 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014903 exon11 c.G2247A p.P749P . . . NAV3 89795 broad.mit.edu 36 12 77039981 77039981 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014903 exon16 c.G3880A p.G1294S . . . FAM90A1 55138 broad.mit.edu 36 12 8268574 8268574 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018088 exon4 c.G122T p.R41M . . . WNK1 65125 broad.mit.edu 36 12 838785 838785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184985 exon6 c.G1514A p.R505H . . . WNK1 65125 broad.mit.edu 36 12 840623 840623 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184985 exon7 c.G1804T p.G602X . . . ATP2B1 490 broad.mit.edu 36 12 88538115 88538115 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001323 exon10 c.G1621A p.V541I . . . LUM 4060 broad.mit.edu 36 12 90022101 90022101 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002345 exon3 c.G989A p.R330H . . . C12orf74 338809 broad.mit.edu 36 12 91624712 91624712 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037671 exon2 c.C174T p.G58G . . . NTN4 59277 broad.mit.edu 36 12 94601618 94601618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021229 exon6 c.C1181T p.P394L . . . ELK3 2004 broad.mit.edu 36 12 95141480 95141480 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005230 exon2 c.A5T p.E2V . . . GAS2L3 283431 broad.mit.edu 36 12 99529969 99529969 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174942 exon6 c.C364T p.R122W . . . TMTC1 83857 broad.mit.edu 36 12 29560654 29560654 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001193451 exon15 c.2202delA p.K734fs . . . NALCN 259232 broad.mit.edu 36 13 100533218 100533218 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052867 exon33 c.G3708A p.P1236P . . . ERCC5 2073 broad.mit.edu 36 13 102257805 102257805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017693 exon3 c.C187T p.R63W . . . DAOA 267012 broad.mit.edu 36 13 104922955 104922955 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161812 exon3 c.C8T p.T3M . . . COL4A1 1282 broad.mit.edu 36 13 109616590 109616590 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001845 exon45 c.G4011A p.P1337P . . . ATP11A 23250 broad.mit.edu 36 13 112487519 112487519 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015205 exon2 c.G109A p.A37T . . . MCF2L 23263 broad.mit.edu 36 13 112783528 112783528 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024979 exon16 c.G1821A p.R607R . . . FAM70B 348013 broad.mit.edu 36 13 113609281 113609281 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182614 exon7 c.C546T p.G182G . . . PSPC1 55269 broad.mit.edu 36 13 19177843 19177843 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042414 exon8 c.G1345A p.A449T . . . TNFRSF19 55504 broad.mit.edu 36 13 23140862 23140862 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148957 exon9 c.A871G p.T291A . . . RASL11A 387496 broad.mit.edu 36 13 26745385 26745385 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206827 exon4 c.C483T p.D161D . . . LNX2 222484 broad.mit.edu 36 13 27025556 27025556 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153371 exon8 c.A1567G p.N523D . . . FRY 10129 broad.mit.edu 36 13 31645532 31645532 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon19 c.T2180A p.I727N . . . STARD13 90627 broad.mit.edu 36 13 32602196 32602196 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178006 exon5 c.C618T p.S206S . . . SOHLH2 54937 broad.mit.edu 36 13 35674096 35674096 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017826 exon2 c.T183C p.D61D . . . SMAD9 4093 broad.mit.edu 36 13 36325645 36325645 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005905 exon5 c.G1060A p.A354T . . . POSTN 10631 broad.mit.edu 36 13 37052761 37052761 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135934 exon11 c.G1466A p.R489H . . . POSTN 10631 broad.mit.edu 36 13 37056993 37056993 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135934 exon8 c.C968T p.T323M . . . SLC25A15 10166 broad.mit.edu 36 13 40279542 40279542 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014252 exon5 c.G565T p.G189C . . . ELF1 1997 broad.mit.edu 36 13 40405962 40405962 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172373 exon9 c.C1459T p.Q487X . . . ZC3H13 23091 broad.mit.edu 36 13 45457531 45457531 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015070 exon10 c.C1622T p.T541M . . . FAM124A 220108 broad.mit.edu 36 13 50723616 50723616 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145019 exon4 c.G220A p.V74I . . . UTP14C 9724 broad.mit.edu 36 13 51502738 51502738 + Silent SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021645 exon2 c.T1797G p.A599A . . . PCDH17 27253 broad.mit.edu 36 13 57107100 57107101 + Missense_Mutation DNP AG TA TA novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001040429 exon1 c.2419_2420TA . . . . C13orf34 79866 broad.mit.edu 36 13 72218710 72218710 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024808 exon10 c.G942A p.P314P . . . LMO7 4008 broad.mit.edu 36 13 75295792 75295792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015842 exon12 c.G2032A p.A678T . . . LMO7 4008 broad.mit.edu 36 13 75321371 75321371 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015842 exon24 c.C3607T p.R1203X . . . SLITRK6 84189 broad.mit.edu 36 13 85268452 85268452 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032229 exon2 c.C193T p.R65X . . . GPR180 160897 broad.mit.edu 36 13 94077296 94077296 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_180989 exon9 c.A1193G p.Q398R . . . ABCC4 10257 broad.mit.edu 36 13 94659753 94659753 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105515 exon6 c.A721G p.M241V . . . MBNL2 10150 broad.mit.edu 36 13 96797178 96797178 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207304 exon5 c.T660A p.D220E . . . MBNL2 10150 broad.mit.edu 36 13 96807824 96807824 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207304 exon6 c.G892A p.V298I . . . TM9SF2 9375 broad.mit.edu 36 13 98970323 98970323 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004800 exon3 c.G272A p.R91H . . . CLYBL 171425 broad.mit.edu 36 13 99316551 99316551 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206808 exon6 c.G691A p.V231I . . . PCDH8 5100 broad.mit.edu 36 13 52320447 52320447 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G - G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032949 exon1 c.126delC p.P42fs . . . DYNC1H1 1778 broad.mit.edu 36 14 101533325 101533325 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon16 c.C3765T p.T1255T . . . DYNC1H1 1778 broad.mit.edu 36 14 101548542 101548542 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon34 c.C6996T p.R2332R . . . DYNC1H1 1778 broad.mit.edu 36 14 101578191 101578191 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon66 c.C12191T p.T4064M . . . DYNC1H1 1778 broad.mit.edu 36 14 101586624 101586624 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon78 c.C13912T p.R4638W . . . WDR20 91833 broad.mit.edu 36 14 101745052 101745052 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181291 exon3 c.C792T p.G264G . . . ZNF839 55778 broad.mit.edu 36 14 101875310 101875310 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018335 exon7 c.G1924A p.A642T . . . TRAF3 7187 broad.mit.edu 36 14 102422306 102422306 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145725 exon7 c.G598A p.V200M . . . OR4K15 81127 broad.mit.edu 36 14 19513855 19513855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005486 exon1 c.G338A p.R113H . . . SUPT16H 11198 broad.mit.edu 36 14 20900283 20900283 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007192 exon15 c.G1706A p.R569Q . . . ACIN1 22985 broad.mit.edu 36 14 22600199 22600199 + Silent SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164816 exon11 c.G1452T p.L484L . . . MYH6 4624 broad.mit.edu 36 14 22921519 22921519 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002471 exon38 c.G5754T p.Q1918H . . . NGDN 25983 broad.mit.edu 36 14 23015404 23015404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015514 exon8 c.C661T p.R221C . . . THTPA 79178 broad.mit.edu 36 14 23096138 23096138 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024328 exon1 c.G332A p.G111D . . . JPH4 84502 broad.mit.edu 36 14 23110506 23110506 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032452 exon6 c.G1274A p.R425H . . . LRRC16B 90668 broad.mit.edu 36 14 23593481 23593481 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138360 exon5 c.C283T p.R95X . . . TM9SF1 10548 broad.mit.edu 36 14 23728466 23728466 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006405 exon6 c.G1816A p.D606N . . . TGM1 7051 broad.mit.edu 36 14 23798815 23798815 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000359 exon6 c.C919T p.R307W . . . KHNYN 23351 broad.mit.edu 36 14 23969935 23969935 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015299 exon2 c.G159A p.W53X . . . SDR39U1 56948 broad.mit.edu 36 14 23979298 23979298 + Missense_Mutation SNP C T T rs35580864 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020195 exon6 c.G713A p.R238H . . . CTSG 1511 broad.mit.edu 36 14 24113340 24113340 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001911 exon4 c.G545A p.R182Q . . . SLC25A21 89874 broad.mit.edu 36 14 36711303 36711303 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171170 exon1 c.T4A p.S2T . . . RPL10L 140801 broad.mit.edu 36 14 46190670 46190670 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080746 exon1 c.G20A p.R7H . . . TMX1 81542 broad.mit.edu 36 14 50780413 50780413 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030755 exon2 c.C242T p.A81V . . . CNIH 10175 broad.mit.edu 36 14 53968631 53968631 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005776 exon3 c.G208A p.A70T . . . SAMD4A 23034 broad.mit.edu 36 14 54312912 54312912 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015589 exon10 c.A1945G p.N649D . . . WDHD1 11169 broad.mit.edu 36 14 54499541 54499541 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007086 exon19 c.C2410T p.R804W . . . KTN1 3895 broad.mit.edu 36 14 55198021 55198021 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004986 exon32 c.G3028A p.G1010S . . . SLC35F4 341880 broad.mit.edu 36 14 57125905 57125905 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080455 exon3 c.C477A p.S159S . . . ARID4A 5926 broad.mit.edu 36 14 57900919 57900919 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023000 exon20 c.G2359A p.E787K . . . SIX4 51804 broad.mit.edu 36 14 60256252 60256252 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017420 exon2 c.G1528A p.V510M . . . SYT16 83851 broad.mit.edu 36 14 61617638 61617638 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031914 exon4 c.A1327T p.M443L . . . KCNH5 27133 broad.mit.edu 36 14 62386228 62386228 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172376 exon8 c.C1291T p.R431W . . . MTHFD1 4522 broad.mit.edu 36 14 63978567 63978567 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005956 exon20 c.G1927A p.A643T . . . ZBTB1 22890 broad.mit.edu 36 14 64058914 64058914 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014950 exon2 c.C939T p.S313S . . . MAX 4149 broad.mit.edu 36 14 64613132 64613132 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145112 exon4 c.C271T p.R91C . . . GPHN 10243 broad.mit.edu 36 14 66416432 66416432 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024218 exon5 c.G317A p.R106Q . . . ARG2 384 broad.mit.edu 36 14 67156518 67156518 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172 exon1 c.A71C p.H24P . . . ACTN1 87 broad.mit.edu 36 14 68416434 68416434 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130005 exon18 c.C2278T p.R760W . . . SLC8A3 6547 broad.mit.edu 36 14 69582546 69582546 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033262 exon8 c.G2649A p.P883P . . . SIPA1L1 26037 broad.mit.edu 36 14 71209044 71209044 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015556 exon9 c.C3056T p.T1019M . . . RGS6 9628 broad.mit.edu 36 14 72031709 72031709 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004296 exon13 c.G951T p.W317C . . . DCAF4 26094 broad.mit.edu 36 14 72474460 72474460 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181341 exon2 c.G21T p.Q7H . . . RBM25 58517 broad.mit.edu 36 14 72608197 72608197 + De_novo_Start_OutOfFrame SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021239 exon2 c.C95A p.P32H . . . HEATR4 399671 broad.mit.edu 36 14 73058972 73058972 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203309 exon2 c.G497A p.R166H . . . PNMA1 9240 broad.mit.edu 36 14 73249751 73249751 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006029 exon1 c.C345T p.T115T . . . TMEM63C 57156 broad.mit.edu 36 14 76787986 76787986 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020431 exon22 c.G2140A p.D714N . . . GSTZ1 2954 broad.mit.edu 36 14 76860970 76860970 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145871 exon2 c.T20A p.I7N . . . ZC3H14 79882 broad.mit.edu 36 14 88139101 88139101 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160104 exon12 c.A1691C p.Q564P . . . CCDC88C 440193 broad.mit.edu 36 14 90836040 90836040 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080414 exon21 c.C3763T p.R1255W . . . CCDC88C 440193 broad.mit.edu 36 14 90849263 90849263 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080414 exon15 c.G2650A p.G884S . . . CCDC88C 440193 broad.mit.edu 36 14 90879708 90879708 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080414 exon5 c.C387T p.G129G . . . TCL1B 9623 broad.mit.edu 36 14 95226952 95226952 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004918 exon2 c.C289T p.R97X . . . BDKRB2 624 broad.mit.edu 36 14 95777299 95777299 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000623 exon3 c.C881T p.T294M . . . SETD3 84193 broad.mit.edu 36 14 98936247 98936247 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032233 exon12 c.G1280A p.W427X . . . EML1 2009 broad.mit.edu 36 14 99433296 99433296 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008707 exon8 c.G796A p.V266I . . . ARHGAP5 394 broad.mit.edu 36 14 31632296 31632296 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001030055 exon2 c.2670delT p.D890fs . . . GOLGA6L1 283767 broad.mit.edu 36 15 20294495 20294495 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001413 exon8 c.G1516A p.D506N . . . C15orf2 23742 broad.mit.edu 36 15 22473117 22473117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018958 exon1 c.C1010T p.P337L . . . ATP10A 57194 broad.mit.edu 36 15 23510205 23510205 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024490 exon10 c.C2053T p.Q685X . . . HERC2 8924 broad.mit.edu 36 15 26093254 26093254 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004667 exon65 c.C9939T p.R3313R . . . APBA2 321 broad.mit.edu 36 15 27172690 27172690 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005503 exon6 c.C1190T p.A397V . . . TJP1 7082 broad.mit.edu 36 15 27783764 27783764 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175610 exon26 c.C4866A p.P1622P . . . CHRFAM7A 89832 broad.mit.edu 36 15 28451829 28451829 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139320 exon7 c.C336T p.P112P . . . RYR3 6263 broad.mit.edu 36 15 31898169 31898169 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon76 c.G10698A p.T3566T . . . FAM98B 283742 broad.mit.edu 36 15 36563993 36563993 + Silent SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173611 exon8 c.A1143T p.G381G . . . RPAP1 26015 broad.mit.edu 36 15 39615043 39615043 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015540 exon5 c.C500A p.P167Q . . . MGA 23269 broad.mit.edu 36 15 39748803 39748803 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164273 exon2 c.G419A p.R140H . . . MAP1A 4130 broad.mit.edu 36 15 41608257 41608257 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002373 exon4 c.G7294T p.A2432S . . . SPG11 80208 broad.mit.edu 36 15 42685574 42685574 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025137 exon20 c.C3461A p.S1154X . . . USP50 373509 broad.mit.edu 36 15 48618310 48618310 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203494 exon5 c.G691A p.A231T . . . SPPL2A 84888 broad.mit.edu 36 15 48812151 48812151 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032802 exon9 c.A955G p.I319V . . . DMXL2 23312 broad.mit.edu 36 15 49534706 49534706 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon39 c.G8472A p.A2824A . . . MYO5C 55930 broad.mit.edu 36 15 50340514 50340514 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018728 exon10 c.A1150C p.T384P . . . MYO5C 55930 broad.mit.edu 36 15 50343707 50343707 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018728 exon9 c.C1019T p.A340V . . . TCF12 6938 broad.mit.edu 36 15 55352612 55352612 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207037 exon19 c.G1838A p.R613H . . . VPS13C 54832 broad.mit.edu 36 15 59998808 59998808 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017684 exon56 c.A7481G p.K2494R . . . VPS13C 54832 broad.mit.edu 36 15 60088225 60088225 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017684 exon12 c.T910C p.S304P . . . IQCH 64799 broad.mit.edu 36 15 65479555 65479555 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031715 exon14 c.G1955A p.R652H . . . CALML4 91860 broad.mit.edu 36 15 66276863 66276863 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031733 exon3 c.G321A p.T107T . . . TLE3 7090 broad.mit.edu 36 15 68145595 68145595 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020908 exon7 c.C389T p.A130V . . . LARP6 55323 broad.mit.edu 36 15 68911614 68911614 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018357 exon3 c.G1307A p.R436H . . . THSD4 79875 broad.mit.edu 36 15 69827842 69827842 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024817 exon13 c.G2270A p.R757K . . . NR2E3 10002 broad.mit.edu 36 15 69891830 69891830 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014249 exon5 c.G672A p.S224S . . . PARP6 56965 broad.mit.edu 36 15 70336785 70336785 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020214 exon12 c.C957T p.G319G . . . HCN4 10021 broad.mit.edu 36 15 71403221 71403221 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005477 exon8 c.G2266A p.A756T . . . C15orf59 388135 broad.mit.edu 36 15 71819808 71819808 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039614 exon2 c.G385A p.E129K . . . CYP1A2 1544 broad.mit.edu 36 15 72832626 72832626 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000761 exon6 c.C1215T p.C405C . . . COX5A 9377 broad.mit.edu 36 15 73008565 73008565 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004255 exon2 c.T162C p.A54A . . . SCAMP5 192683 broad.mit.edu 36 15 73097925 73097925 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178111 exon7 c.G509A p.S170N . . . C15orf39 56905 broad.mit.edu 36 15 73286544 73286544 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015492 exon2 c.C1102A p.P368T . . . NEIL1 79661 broad.mit.edu 36 15 73433157 73433157 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024608 exon6 c.G743A p.S248N . . . MAN2C1 4123 broad.mit.edu 36 15 73435403 73435403 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006715 exon26 c.A3020G p.D1007G . . . SNX33 257364 broad.mit.edu 36 15 73729306 73729306 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153271 exon1 c.T808G p.F270V . . . KIAA1199 57214 broad.mit.edu 36 15 79026456 79026456 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018689 exon28 c.T3953C p.L1318S . . . IL16 3603 broad.mit.edu 36 15 79358255 79358255 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172128 exon7 c.T833C p.L278P . . . EFTUD1 79631 broad.mit.edu 36 15 80299075 80299075 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040610 exon12 c.A1431G p.K477K . . . C15orf40 123207 broad.mit.edu 36 15 81470099 81470099 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160113 exon2 c.A132G p.E44E . . . KLHL25 64410 broad.mit.edu 36 15 84113574 84113574 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022480 exon2 c.G472A p.A158T . . . ACAN 176 broad.mit.edu 36 15 87201158 87201158 + De_novo_Start_OutOfFrame SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135 exon12 c.G4338T p.E1446D . . . RHCG 51458 broad.mit.edu 36 15 87821788 87821788 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016321 exon7 c.C1076T p.A359V . . . BLM 641 broad.mit.edu 36 15 89127125 89127125 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000057 exon13 c.A2625G p.A875A . . . SV2B 9899 broad.mit.edu 36 15 89570653 89570653 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014848 exon3 c.T156C p.G52G . . . CHD2 1106 broad.mit.edu 36 15 91368636 91368636 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001271 exon39 c.C5184T p.S1728S . . . IGF1R 3480 broad.mit.edu 36 15 97269452 97269452 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000875 exon6 c.C1263T p.Y421Y . . . MEF2A 4205 broad.mit.edu 36 15 98070271 98070271 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005587 exon11 c.G1272A p.P424P . . . TEKT5 146279 broad.mit.edu 36 16 10637203 10637203 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144674 exon6 c.C1160T p.P387L . . . GNPTG 84572 broad.mit.edu 36 16 1352883 1352883 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032520 exon10 c.C798T p.H266H . . . MYH11 4629 broad.mit.edu 36 16 15718673 15718673 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040114 exon39 c.C5350T p.R1784C . . . MYH11 4629 broad.mit.edu 36 16 15719771 15719771 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040114 exon38 c.C5218T p.R1740C . . . MYH11 4629 broad.mit.edu 36 16 15742951 15742951 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040114 exon23 c.G2750A p.R917Q . . . CRAMP1L 57585 broad.mit.edu 36 16 1659107 1659107 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020825 exon18 c.A3439G p.T1147A . . . SMG1 23049 broad.mit.edu 36 16 18815640 18815640 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015092 exon2 c.G232A p.A78T . . . C16orf88 400506 broad.mit.edu 36 16 19629333 19629333 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012991 exon4 c.C1064T p.T355M . . . DNAH3 55567 broad.mit.edu 36 16 20855595 20855595 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017539 exon60 c.G11736T p.E3912D . . . DNAH3 55567 broad.mit.edu 36 16 20882697 20882697 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017539 exon53 c.C10010T p.T3337M . . . TRAF7 84231 broad.mit.edu 36 16 2160648 2160648 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032271 exon5 c.C264T p.S88S . . . SCNN1B 6338 broad.mit.edu 36 16 23299336 23299336 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000336 exon13 c.G1636A p.D546N . . . ERN2 10595 broad.mit.edu 36 16 23625221 23625221 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033266 exon7 c.C664A p.P222T . . . PRKCB 5579 broad.mit.edu 36 16 24110018 24110018 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212535 exon16 c.G1829A p.R610H . . . RBBP6 5930 broad.mit.edu 36 16 24480732 24480732 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018703 exon10 c.G1038A p.P346P . . . TNRC6A 27327 broad.mit.edu 36 16 24709773 24709773 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014494 exon6 c.C2309T p.T770I . . . HS3ST4 9951 broad.mit.edu 36 16 26054943 26054943 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006040 exon2 c.G1244A p.R415Q . . . ATXN2L 11273 broad.mit.edu 36 16 28755175 28755175 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148414 exon23 c.G3167A p.R1056H . . . SH2B1 25970 broad.mit.edu 36 16 28791363 28791363 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015503 exon7 c.G1733A p.R578H . . . DOC2A 8448 broad.mit.edu 36 16 29926053 29926053 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003586 exon6 c.G596A p.R199H . . . MAPK3 5595 broad.mit.edu 36 16 30040826 30040826 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040056 exon2 c.C173T p.S58L . . . ITGAL 3683 broad.mit.edu 36 16 30425659 30425659 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114380 exon19 c.G2237A p.R746H . . . SRCAP 10847 broad.mit.edu 36 16 30632442 30632442 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006662 exon16 c.G2402A p.R801H . . . RNF40 9810 broad.mit.edu 36 16 30685594 30685594 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014771 exon11 c.G1325A p.R442H . . . TRIM72 493829 broad.mit.edu 36 16 31141683 31141683 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008274 exon6 c.G775A p.A259T . . . ZNF213 7760 broad.mit.edu 36 16 3128459 3128459 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134655 exon3 c.C439T p.R147W . . . ITGAD 3681 broad.mit.edu 36 16 31316693 31316693 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005353 exon5 c.G389A p.R130H . . . ITGAD 3681 broad.mit.edu 36 16 31322344 31322344 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005353 exon7 c.A581C p.N194T . . . TGFB1I1 7041 broad.mit.edu 36 16 31392288 31392288 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042454 exon2 c.T39C p.T13T . . . MEFV 4210 broad.mit.edu 36 16 3233535 3233535 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000243 exon10 c.C1953T p.G651G . . . ZNF75A 7627 broad.mit.edu 36 16 3307833 3307833 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153028 exon6 c.G854A p.R285Q . . . ZNF597 146434 broad.mit.edu 36 16 3426829 3426829 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152457 exon4 c.G871A p.V291I . . . SLX4 84464 broad.mit.edu 36 16 3579800 3579800 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032444 exon12 c.C3840T p.S1280S . . . SLX4 84464 broad.mit.edu 36 16 3598482 3598482 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032444 exon2 c.C485T p.T162M . . . TRAP1 10131 broad.mit.edu 36 16 3653479 3653479 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016292 exon14 c.C1655T p.T552M . . . ADCY9 115 broad.mit.edu 36 16 3969168 3969168 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001116 exon8 c.G2629A p.A877T . . . DNAJA3 9093 broad.mit.edu 36 16 4438740 4438740 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135110 exon9 c.C1131T p.P377P . . . NETO2 81831 broad.mit.edu 36 16 45719758 45719758 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018092 exon4 c.G460T p.A154S . . . NUDT16L1 84309 broad.mit.edu 36 16 4684987 4684987 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032349 exon3 c.T442C p.Y148H . . . SEPT12 124404 broad.mit.edu 36 16 4768089 4768089 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144605 exon9 c.C874T p.R292C . . . PPL 5493 broad.mit.edu 36 16 4893944 4893944 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002705 exon3 c.G261A p.A87A . . . NOD2 64127 broad.mit.edu 36 16 49302518 49302518 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022162 exon4 c.G1195A p.D399N . . . SALL1 6299 broad.mit.edu 36 16 49728835 49728835 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002968 exon3 c.G3664T p.A1222S . . . CES5A 221223 broad.mit.edu 36 16 54438182 54438182 + Missense_Mutation SNP C T T rs16955812 byCluster;byFrequency;byHapMap TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143685 exon12 c.G1495A p.G499R . . . GPR97 222487 broad.mit.edu 36 16 56270623 56270623 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170776 exon5 c.G526A p.V176M . . . GPR97 222487 broad.mit.edu 36 16 56277194 56277194 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170776 exon11 c.G1395T p.A465A . . . GPR97 222487 broad.mit.edu 36 16 56279857 56279857 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170776 exon12 c.T1633C p.S545P . . . KIFC3 3801 broad.mit.edu 36 16 56356981 56356981 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130100 exon11 c.C1403T p.A468V . . . C16orf57 79650 broad.mit.edu 36 16 56601457 56601457 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024598 exon3 c.G389A p.R130H . . . CDH11 1009 broad.mit.edu 36 16 63573505 63573505 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001797 exon8 c.C1200T p.T400T . . . CMTM1 113540 broad.mit.edu 36 16 65157954 65157954 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181296 exon1 c.G37T p.A13S . . . CES3 23491 broad.mit.edu 36 16 65554656 65554656 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185177 exon2 c.C156T p.G52G . . . E2F4 1874 broad.mit.edu 36 16 65783690 65783690 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001950 exon1 c.A59C p.K20T . . . FHOD1 29109 broad.mit.edu 36 16 65822747 65822747 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013241 exon17 c.G2512A p.G838S . . . FHOD1 29109 broad.mit.edu 36 16 65828010 65828010 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013241 exon11 c.A1270G p.I424V . . . PLEKHG4 25894 broad.mit.edu 36 16 65876813 65876813 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129727 exon15 c.G2315A p.R772H . . . SLC12A4 6560 broad.mit.edu 36 16 66549427 66549427 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145964 exon4 c.A271G p.M91V . . . CDH1 999 broad.mit.edu 36 16 67393212 67393212 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004360 exon3 c.A302G p.Y101C . . . CDH1 999 broad.mit.edu 36 16 67410798 67410798 + Silent SNP G A A rs35741240 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004360 exon11 c.G1680A p.T560T . . . CLEC18C 283971 broad.mit.edu 36 16 68768772 68768772 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173619 exon3 c.C344T p.A115V . . . ZNF821 55565 broad.mit.edu 36 16 70451705 70451705 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017530 exon6 c.G830A p.R277Q . . . ZFHX3 463 broad.mit.edu 36 16 71541950 71541950 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006885 exon3 c.T3135C p.C1045C . . . WDR59 79726 broad.mit.edu 36 16 73477053 73477053 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030581 exon25 c.C2688T p.I896I . . . WDR59 79726 broad.mit.edu 36 16 73541183 73541183 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030581 exon5 c.C341T p.A114V . . . HSD17B2 3294 broad.mit.edu 36 16 80659402 80659402 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002153 exon2 c.G392A p.R131H . . . LRRC50 123872 broad.mit.edu 36 16 82756966 82756966 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178452 exon7 c.C940T p.R314W . . . FAM92B 339145 broad.mit.edu 36 16 83701472 83701472 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198491 exon2 c.C116T p.T39M . . . LMF1 64788 broad.mit.edu 36 16 844628 844628 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022773 exon11 c.C1609T p.R537W . . . C16orf68 79091 broad.mit.edu 36 16 8646011 8646011 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024109 exon10 c.G1107T p.K369N . . . LMF1 64788 broad.mit.edu 36 16 869713 869713 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022773 exon6 c.C755T p.A252V . . . CDK10 8558 broad.mit.edu 36 16 88285407 88285407 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098533 exon4 c.G75A p.P25P . . . TCF25 22980 broad.mit.edu 36 16 88498054 88498054 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014972 exon13 c.G1409C p.S470T . . . USP7 7874 broad.mit.edu 36 16 8895396 8895396 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003470 exon31 c.G3269A p.R1090H . . . USP7 7874 broad.mit.edu 36 16 8921717 8921717 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003470 exon5 c.C611T p.A204V . . . GRIN2A 2903 broad.mit.edu 36 16 9939530 9939530 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134408 exon3 c.C794T p.T265M . . . SLX4 84464 broad.mit.edu 36 16 3579381 3579381 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G - G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032444 exon12 c.4259delC p.P1420fs . . . NLRC5 84166 broad.mit.edu 36 16 55670525 55670525 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C - C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032206 exon44 c.5144delC p.S1715fs . . . MYH13 8735 broad.mit.edu 36 17 10174503 10174503 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon21 c.G2361A p.T787T . . . SLC43A2 124935 broad.mit.edu 36 17 1466770 1466770 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152346 exon3 c.G204A p.G68G . . . NCOR1 9611 broad.mit.edu 36 17 15909003 15909003 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190440 exon33 c.A5055G p.G1685G . . . ZNF287 57336 broad.mit.edu 36 17 16411459 16411459 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020653 exon2 c.G312T p.E104D . . . MPRIP 23164 broad.mit.edu 36 17 16970808 16970808 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015134 exon4 c.G335A p.R112H . . . MYO15A 51168 broad.mit.edu 36 17 17987989 17987989 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016239 exon27 c.C6127A p.L2043M . . . TOP3A 7156 broad.mit.edu 36 17 18149182 18149182 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004618 exon5 c.C468T p.I156I . . . FAM83G 644815 broad.mit.edu 36 17 18815595 18815595 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039999 exon6 c.C2274T p.P758P . . . DPH1 1801 broad.mit.edu 36 17 1883551 1883551 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001383 exon2 c.C79T p.R27W . . . MAPK7 5598 broad.mit.edu 36 17 19224657 19224657 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139033 exon4 c.G542A p.R181H . . . ULK2 9706 broad.mit.edu 36 17 19627612 19627612 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142610 exon22 c.C2450T p.T817M . . . USP22 23326 broad.mit.edu 36 17 20872549 20872549 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015276 exon2 c.G202A p.V68I . . . KSR1 8844 broad.mit.edu 36 17 22968542 22968542 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014238 exon20 c.G2243A p.R748Q . . . SLC13A2 9058 broad.mit.edu 36 17 23842891 23842891 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145976 exon5 c.G643A p.G215S . . . KIAA0100 9703 broad.mit.edu 36 17 23971061 23971061 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014680 exon30 c.C5464T p.R1822W . . . PROCA1 147011 broad.mit.edu 36 17 24054864 24054864 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152465 exon4 c.C850T p.R284W . . . PHF12 57649 broad.mit.edu 36 17 24262360 24262360 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033561 exon10 c.C2111T p.T704M . . . ANKRD13B 124930 broad.mit.edu 36 17 24959202 24959202 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152345 exon3 c.G323A p.R108Q . . . KIAA0664 23277 broad.mit.edu 36 17 2543980 2543980 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015229 exon19 c.C3078T p.L1026L . . . SLC6A4 6532 broad.mit.edu 36 17 25569277 25569277 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001045 exon5 c.C683T p.A228V . . . PSMD11 5717 broad.mit.edu 36 17 27830479 27830479 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002815 exon10 c.G1010A p.R337Q . . . NLE1 54475 broad.mit.edu 36 17 30487302 30487302 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014445 exon8 c.G134A p.R45Q . . . SLFN13 146857 broad.mit.edu 36 17 30793224 30793224 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144682 exon5 c.G1393A p.A465T . . . TRPV1 7442 broad.mit.edu 36 17 3441059 3441059 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018727 exon4 c.G552A p.T184T . . . FBXL20 84961 broad.mit.edu 36 17 34673956 34673956 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032875 exon14 c.A1201T p.R401W . . . MED24 9862 broad.mit.edu 36 17 35430076 35430076 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079518 exon23 c.C2641T p.R881W . . . MED24 9862 broad.mit.edu 36 17 35433025 35433025 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079518 exon19 c.C2096T p.T699M . . . NR1D1 9572 broad.mit.edu 36 17 35506487 35506487 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021724 exon3 c.G442A p.A148T . . . RAPGEFL1 51195 broad.mit.edu 36 17 35599077 35599077 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016339 exon6 c.G420A p.T140T . . . SMARCE1 6605 broad.mit.edu 36 17 36047334 36047334 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003079 exon5 c.C173T p.T58M . . . ITGAE 3682 broad.mit.edu 36 17 3607115 3607115 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002208 exon10 c.G1083A p.P361P . . . KRT27 342574 broad.mit.edu 36 17 36189499 36189499 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181537 exon4 c.G825A p.A275A . . . NT5C3L 115024 broad.mit.edu 36 17 37244999 37244999 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052935 exon3 c.C163T p.R55X . . . KAT2A 2648 broad.mit.edu 36 17 37523305 37523305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021078 exon9 c.C1345T p.R449C . . . PTRF 284119 broad.mit.edu 36 17 37810879 37810879 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012232 exon2 c.G525A p.S175S . . . ATP2A3 489 broad.mit.edu 36 17 3786420 3786420 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174955 exon16 c.C2414T p.T805M . . . MLX 6945 broad.mit.edu 36 17 37974080 37974080 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198204 exon3 c.G146A p.S49N . . . TUBG1 7283 broad.mit.edu 36 17 38019211 38019211 + Silent SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001070 exon7 c.C627A p.A209A . . . CNTD1 124817 broad.mit.edu 36 17 38211390 38211390 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173478 exon4 c.C542T p.T181I . . . G6PC3 92579 broad.mit.edu 36 17 39508623 39508623 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138387 exon6 c.G727A p.V243M . . . HDAC5 10014 broad.mit.edu 36 17 39511725 39511725 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001015053 exon25 c.G3130A p.A1044T . . . ATXN7L3 56970 broad.mit.edu 36 17 39627228 39627228 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020218 exon12 c.G994T p.G332C . . . UBTF 7343 broad.mit.edu 36 17 39640450 39640450 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001076683 exon19 c.C1956T p.D652D . . . CYB5D2 124936 broad.mit.edu 36 17 4000037 4000037 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144611 exon2 c.T354C p.N118N . . . EFTUD2 9343 broad.mit.edu 36 17 40284636 40284636 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004247 exon27 c.C2791T p.R931W . . . NMT1 4836 broad.mit.edu 36 17 40535866 40535866 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021079 exon9 c.C1015T p.R339X . . . MAP3K14 9020 broad.mit.edu 36 17 40703696 40703696 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003954 exon11 c.G1838A p.R613H . . . ARHGAP27 201176 broad.mit.edu 36 17 40828753 40828753 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199282 exon17 c.T1499C p.M500T . . . IMP5 162540 broad.mit.edu 36 17 41278124 41278124 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175882 exon1 c.C72T p.Y24Y . . . MAPT 4137 broad.mit.edu 36 17 41407596 41407596 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016835 exon4 c.C230T p.A77V . . . KIAA1267 284058 broad.mit.edu 36 17 41472993 41472993 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015443 exon8 c.G2125T p.A709S . . . NSF 4905 broad.mit.edu 36 17 42182314 42182314 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006178 exon18 c.G1917T p.K639N . . . NFE2L1 4779 broad.mit.edu 36 17 43490911 43490911 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003204 exon6 c.T1228G p.S410A . . . IGF2BP1 10642 broad.mit.edu 36 17 44478643 44478643 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160423 exon12 c.C1133T p.T378M . . . NGFR 4804 broad.mit.edu 36 17 44945209 44945209 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002507 exon6 c.T1123C p.S375P . . . CHAD 1101 broad.mit.edu 36 17 45900767 45900767 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001267 exon1 c.C407T p.T136I . . . RSAD1 55316 broad.mit.edu 36 17 45915711 45915711 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018346 exon6 c.C916T p.R306X . . . EPN3 55040 broad.mit.edu 36 17 45969045 45969045 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017957 exon2 c.C129T p.I43I . . . CACNA1G 8913 broad.mit.edu 36 17 46004999 46004999 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198382 exon6 c.G832A p.G278S . . . ABCC3 8714 broad.mit.edu 36 17 46096099 46096099 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144070 exon9 c.G1057A p.A353T . . . KIF1C 10749 broad.mit.edu 36 17 4867994 4867994 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006612 exon23 c.G3136A p.A1046T . . . GPR172B 55065 broad.mit.edu 36 17 4877574 4877574 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017986 exon3 c.G934A p.A312T . . . KIF2B 84643 broad.mit.edu 36 17 49256019 49256019 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032559 exon1 c.C626T p.P209L . . . BZRAP1 9256 broad.mit.edu 36 17 53758665 53758665 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004758 exon3 c.G558A p.T186T . . . TEX14 56155 broad.mit.edu 36 17 54034901 54034901 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198393 exon12 c.A1386G p.V462V . . . CLTC 1213 broad.mit.edu 36 17 55109218 55109218 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004859 exon17 c.C2683T p.R895C . . . USP32 84669 broad.mit.edu 36 17 55640915 55640915 + Silent SNP C G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032582 exon23 c.G2655C p.G885G . . . PPM1D 8493 broad.mit.edu 36 17 56095319 56095319 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003620 exon6 c.C1442T p.A481V . . . INTS2 57508 broad.mit.edu 36 17 57325940 57325940 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020748 exon13 c.C1690T p.R564C . . . MRC2 9902 broad.mit.edu 36 17 58097323 58097323 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006039 exon3 c.C657T p.Y219Y . . . SCN4A 6329 broad.mit.edu 36 17 59380555 59380555 + Silent SNP G A A rs73992419 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000334 exon15 c.C2919T p.P973P . . . SCN4A 6329 broad.mit.edu 36 17 59392441 59392441 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000334 exon11 c.G1689A p.P563P . . . APOH 350 broad.mit.edu 36 17 61650298 61650298 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000042 exon4 c.C395T p.P132L . . . HELZ 9931 broad.mit.edu 36 17 62564640 62564640 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014877 exon22 c.C2822T p.A941V . . . SLC16A6 9120 broad.mit.edu 36 17 63778913 63778913 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004694 exon5 c.G983A p.R328H . . . ABCA5 23461 broad.mit.edu 36 17 64816030 64816030 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon5 c.G544A p.A182T . . . KCNJ2 3759 broad.mit.edu 36 17 65682826 65682826 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000891 exon2 c.C51T p.D17D . . . FBXO39 162517 broad.mit.edu 36 17 6631394 6631394 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153230 exon4 c.C1252T p.Q418X . . . NXN 64359 broad.mit.edu 36 17 669532 669532 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022463 exon5 c.G717A p.S239S . . . OTOP2 92736 broad.mit.edu 36 17 70432579 70432579 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178160 exon2 c.G257A p.R86H . . . RECQL5 9400 broad.mit.edu 36 17 71135135 71135135 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004259 exon20 c.G2938A p.E980K . . . QRICH2 84074 broad.mit.edu 36 17 71799346 71799346 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032134 exon4 c.C2559T p.Y853Y . . . QRICH2 84074 broad.mit.edu 36 17 71799887 71799887 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032134 exon4 c.G2018A p.R673H . . . PRPSAP1 5635 broad.mit.edu 36 17 71852384 71852384 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002766 exon3 c.C253T p.R85C . . . JMJD6 23210 broad.mit.edu 36 17 72226482 72226482 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015167 exon6 c.C1136T p.T379M . . . SEC14L1 6397 broad.mit.edu 36 17 72714486 72714486 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039573 exon13 c.C1423T p.L475L . . . TMC6 11322 broad.mit.edu 36 17 73626692 73626692 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007267 exon15 c.C1842T p.P614P . . . SENP3 26168 broad.mit.edu 36 17 7408878 7408878 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015670 exon3 c.C928T p.R310X . . . TIMP2 7077 broad.mit.edu 36 17 74363388 74363388 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003255 exon5 c.G619A p.A207T . . . CBX2 84733 broad.mit.edu 36 17 75370161 75370161 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032647 exon4 c.C254T p.A85V . . . TBC1D16 125058 broad.mit.edu 36 17 75601899 75601899 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019020 exon2 c.T43A p.S15T . . . CARD14 79092 broad.mit.edu 36 17 75792651 75792651 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024110 exon17 c.C2314T p.R772C . . . RPTOR 57521 broad.mit.edu 36 17 76472246 76472246 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020761 exon16 c.G1721A p.R574H . . . BAIAP2 10458 broad.mit.edu 36 17 76674960 76674960 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006340 exon6 c.G474A p.S158S . . . TMEM105 284186 broad.mit.edu 36 17 76902835 76902835 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178520 exon2 c.C23T p.A8V . . . SIRT7 51547 broad.mit.edu 36 17 77463745 77463745 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016538 exon10 c.C1042T p.R348C . . . ALOX15B 247 broad.mit.edu 36 17 7883431 7883431 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039130 exon2 c.G150T p.E50D . . . ALOX12B 242 broad.mit.edu 36 17 7917718 7917718 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001139 exon13 c.T1737C p.A579A . . . PER1 5187 broad.mit.edu 36 17 7991329 7991329 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002616 exon13 c.C1593T p.N531N . . . C17orf59 54785 broad.mit.edu 36 17 8033246 8033246 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017622 exon1 c.T938C p.M313T . . . RCVRN 5957 broad.mit.edu 36 17 9748940 9748940 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002903 exon1 c.G283A p.A95T . . . TRPV1 7442 broad.mit.edu 36 17 3438274 3438276 + In_Frame_Del DEL TTC - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 TTC TTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018727 exon7 c.1179_1181del p.393_394del . . . APCDD1 147495 broad.mit.edu 36 18 10458502 10458502 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153000 exon2 c.G95T p.S32I . . . NAPG 8774 broad.mit.edu 36 18 10522792 10522792 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003826 exon3 c.C209T p.A70V . . . CEP192 55125 broad.mit.edu 36 18 13045897 13045897 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032142 exon19 c.C3308T p.T1103I . . . CEP192 55125 broad.mit.edu 36 18 13059738 13059738 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032142 exon27 c.T5057C p.V1686A . . . USP14 9097 broad.mit.edu 36 18 192914 192914 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005151 exon11 c.C911T p.T304M . . . NPC1 4864 broad.mit.edu 36 18 19390547 19390547 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000271 exon8 c.C984T p.S328S . . . ZNF521 25925 broad.mit.edu 36 18 21058371 21058371 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015461 exon4 c.G3509A p.S1170N . . . ZNF521 25925 broad.mit.edu 36 18 21058683 21058683 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015461 exon4 c.A3197C p.K1066T . . . TAF4B 6875 broad.mit.edu 36 18 22108785 22108785 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005640 exon4 c.C758T p.P253L . . . TAF4B 6875 broad.mit.edu 36 18 22155111 22155111 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005640 exon11 c.C2082T p.G694G . . . DSG1 1828 broad.mit.edu 36 18 27162190 27162190 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001942 exon4 c.G257A p.R86H . . . B4GALT6 9331 broad.mit.edu 36 18 27465050 27465050 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004775 exon6 c.A646G p.M216V . . . MEP1B 4225 broad.mit.edu 36 18 28044606 28044606 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005925 exon10 c.T1064C p.L355P . . . ASXL3 80816 broad.mit.edu 36 18 29579870 29579870 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030632 exon12 c.A6060G p.P2020P . . . MYOM1 8736 broad.mit.edu 36 18 3057309 3057309 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019856 exon37 c.C4721T p.A1574V . . . PIK3C3 5289 broad.mit.edu 36 18 37891993 37891993 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002647 exon22 c.G2412A p.T804T . . . SLC14A2 8170 broad.mit.edu 36 18 41459652 41459652 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007163 exon3 c.C157T p.R53W . . . KIAA1632 57724 broad.mit.edu 36 18 41738049 41738049 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon25 c.G4361A p.R1454H . . . KIAA1632 57724 broad.mit.edu 36 18 41749560 41749560 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon20 c.C3607T p.R1203W . . . TCEB3B 51224 broad.mit.edu 36 18 42814275 42814275 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016427 exon1 c.G1359A p.T453T . . . ZBTB7C 201501 broad.mit.edu 36 18 43820337 43820337 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039360 exon2 c.G1140A p.P380P . . . ACAA2 10449 broad.mit.edu 36 18 45583178 45583178 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006111 exon2 c.C60T p.Y20Y . . . ME2 4200 broad.mit.edu 36 18 46712650 46712650 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168335 exon13 c.A1339G p.S447G . . . C18orf54 162681 broad.mit.edu 36 18 50142159 50142159 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173529 exon3 c.G432A p.P144P . . . FECH 2235 broad.mit.edu 36 18 53373143 53373143 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012515 exon8 c.G862A p.A288T . . . FECH 2235 broad.mit.edu 36 18 53381166 53381166 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012515 exon6 c.C661T p.R221W . . . NARS 4677 broad.mit.edu 36 18 53421048 53421048 + Silent SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004539 exon12 c.T1377G p.T459T . . . EPB41L3 23136 broad.mit.edu 36 18 5387204 5387204 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012307 exon18 c.G2694A p.T898T . . . KIAA1468 57614 broad.mit.edu 36 18 58045569 58045569 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020854 exon6 c.G926A p.R309Q . . . CDH19 28513 broad.mit.edu 36 18 62323218 62323218 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021153 exon12 c.G2130A p.P710P . . . DOK6 220164 broad.mit.edu 36 18 65219484 65219484 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152721 exon1 c.A24G p.I8M . . . LAMA1 284217 broad.mit.edu 36 18 6956164 6956164 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon49 c.C7032T p.Y2344Y . . . LAMA1 284217 broad.mit.edu 36 18 6964995 6964995 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon46 c.C6530T p.A2177V . . . CNDP2 55748 broad.mit.edu 36 18 70324121 70324121 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018235 exon4 c.G262A p.D88N . . . LAMA1 284217 broad.mit.edu 36 18 7070337 7070337 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon2 c.G181A p.V61I . . . ZNF407 55628 broad.mit.edu 36 18 70904176 70904176 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017757 exon8 c.G5511A p.A1837A . . . ZNF236 7776 broad.mit.edu 36 18 72721144 72721144 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007345 exon8 c.G1066A p.D356N . . . ATP9B 374868 broad.mit.edu 36 18 74957564 74957564 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198531 exon2 c.C220T p.R74X . . . ATP9B 374868 broad.mit.edu 36 18 75138125 75138125 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198531 exon13 c.G1352A p.R451Q . . . CTDP1 9150 broad.mit.edu 36 18 75578567 75578567 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_048368 exon9 c.G2113A p.V705M . . . DSG3 1830 broad.mit.edu 36 18 27298175 27298175 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C - C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001944 exon9 c.1103delC p.T368fs . . . ANGPTL6 83854 broad.mit.edu 36 19 10065056 10065056 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031917 exon5 c.C1191T p.S397S . . . DOCK6 57572 broad.mit.edu 36 19 11208514 11208514 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020812 exon19 c.C2115T p.G705G . . . RAB3D 9545 broad.mit.edu 36 19 11307143 11307143 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004283 exon4 c.G452A p.R151Q . . . PRKCSH 5589 broad.mit.edu 36 19 11420765 11420765 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002743 exon15 c.G1302A p.S434S . . . ECSIT 51295 broad.mit.edu 36 19 11485044 11485044 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142464 exon4 c.C565T p.R189C . . . ZNF823 55552 broad.mit.edu 36 19 11694064 11694064 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080493 exon4 c.G1285A p.G429S . . . GCDH 2639 broad.mit.edu 36 19 12869224 12869224 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013976 exon10 c.G1064A p.R355H . . . FARSA 2193 broad.mit.edu 36 19 12902434 12902434 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004461 exon2 c.G277A p.E93K . . . RAD23A 5886 broad.mit.edu 36 19 12919787 12919787 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005053 exon2 c.C198T p.I66I . . . RAD23A 5886 broad.mit.edu 36 19 12920152 12920152 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005053 exon3 c.G396A p.T132T . . . TRMT1 55621 broad.mit.edu 36 19 13077195 13077195 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017722 exon15 c.C1719T p.D573D . . . CCDC130 81576 broad.mit.edu 36 19 13730999 13730999 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030818 exon8 c.G486A p.A162A . . . RFX1 5989 broad.mit.edu 36 19 13937457 13937457 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002918 exon15 c.C2094T p.D698D . . . PRKACA 5566 broad.mit.edu 36 19 14069433 14069433 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002730 exon7 c.C600T p.C200C . . . SLC1A6 6511 broad.mit.edu 36 19 14926029 14926029 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005071 exon7 c.G1282A p.A428T . . . SYDE1 85360 broad.mit.edu 36 19 15082487 15082487 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033025 exon4 c.G1231A p.G411S . . . NOTCH3 4854 broad.mit.edu 36 19 15142154 15142154 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000435 exon27 c.C5102T p.A1701V . . . NOTCH3 4854 broad.mit.edu 36 19 15157398 15157398 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000435 exon13 c.C2044A p.L682I . . . CYP4F22 126410 broad.mit.edu 36 19 15512382 15512382 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173483 exon8 c.C793T p.R265W . . . TCF3 6929 broad.mit.edu 36 19 1574996 1574996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136139 exon7 c.C503T p.T168M . . . AP1M1 8907 broad.mit.edu 36 19 16205325 16205325 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130524 exon11 c.C1105T p.R369W . . . CHERP 10523 broad.mit.edu 36 19 16504469 16504469 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006387 exon5 c.G614T p.G205V . . . SIN3B 23309 broad.mit.edu 36 19 16837445 16837445 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015260 exon12 c.C1704T p.P568P . . . FAM129C 199786 broad.mit.edu 36 19 17515145 17515145 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173544 exon12 c.C1442T p.A481V . . . GLT25D1 79709 broad.mit.edu 36 19 17531202 17531202 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024656 exon2 c.G343A p.V115M . . . FCHO1 23149 broad.mit.edu 36 19 17742602 17742602 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161359 exon7 c.C341T p.A114V . . . FCHO1 23149 broad.mit.edu 36 19 17756541 17756541 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161359 exon24 c.G2084A p.R695H . . . REXO1 57455 broad.mit.edu 36 19 1778903 1778903 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020695 exon2 c.G885A p.T295T . . . JAK3 3718 broad.mit.edu 36 19 17806718 17806718 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000215 exon16 c.G2142A p.T714T . . . SLC5A5 6528 broad.mit.edu 36 19 17847774 17847774 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000453 exon5 c.C557A p.A186D . . . KCNN1 3780 broad.mit.edu 36 19 17953728 17953728 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002248 exon5 c.C709T p.R237C . . . MAST3 23031 broad.mit.edu 36 19 18106670 18106670 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015016 exon16 c.G1661A p.R554H . . . CRTC1 23373 broad.mit.edu 36 19 18721639 18721639 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015321 exon5 c.G492A p.Q164Q . . . COMP 1311 broad.mit.edu 36 19 18758428 18758428 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000095 exon11 c.G1168A p.V390I . . . GATAD2A 54815 broad.mit.edu 36 19 19467651 19467651 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017660 exon6 c.C713T p.A238V . . . MKNK2 2872 broad.mit.edu 36 19 1994502 1994502 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017572 exon6 c.G419T p.R140M . . . AP3D1 8943 broad.mit.edu 36 19 2061171 2061171 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003938 exon26 c.G3042A p.A1014A . . . SF3A2 8175 broad.mit.edu 36 19 2197936 2197936 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007165 exon7 c.C461T p.A154V . . . JSRP1 126306 broad.mit.edu 36 19 2205260 2205260 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144616 exon4 c.C188A p.P63H . . . SPPL2B 56928 broad.mit.edu 36 19 2289839 2289839 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077238 exon4 c.C458T p.T153M . . . SGTA 6449 broad.mit.edu 36 19 2714719 2714719 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003021 exon6 c.C429T p.G143G . . . GNA15 2769 broad.mit.edu 36 19 3101197 3101197 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002068 exon3 c.G399A p.A133A . . . TJP3 27134 broad.mit.edu 36 19 3699060 3699060 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014428 exon18 c.C2690T p.S897L . . . MATK 4145 broad.mit.edu 36 19 3730033 3730033 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139354 exon11 c.G1031A p.R344Q . . . MATK 4145 broad.mit.edu 36 19 3730422 3730422 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139354 exon10 c.C832T p.R278W . . . DPY19L3 147991 broad.mit.edu 36 19 37663297 37663297 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172774 exon18 c.C1983T p.N661N . . . ZFR2 23217 broad.mit.edu 36 19 3782779 3782779 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015174 exon4 c.G477A p.A159A . . . LSM14A 26065 broad.mit.edu 36 19 39397910 39397910 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114093 exon5 c.A580G p.T194A . . . GPI 2821 broad.mit.edu 36 19 39579360 39579360 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000175 exon14 c.G1227A p.P409P . . . WTIP 126374 broad.mit.edu 36 19 39675787 39675787 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080436 exon3 c.C775T p.R259X . . . ZNF30 90075 broad.mit.edu 36 19 40126574 40126574 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099437 exon5 c.C867T p.Y289Y . . . FXYD5 53827 broad.mit.edu 36 19 40349008 40349008 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164605 exon8 c.C427T p.R143W . . . GAPDHS 26330 broad.mit.edu 36 19 40725282 40725282 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014364 exon6 c.G591A p.P197P . . . RBM42 79171 broad.mit.edu 36 19 40815845 40815845 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024321 exon6 c.G535A p.G179S . . . NPHS1 4868 broad.mit.edu 36 19 41014057 41014057 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004646 exon26 c.G3368A p.R1123Q . . . NPHS1 4868 broad.mit.edu 36 19 41025159 41025159 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004646 exon18 c.C2468T p.A823V . . . WDR62 284403 broad.mit.edu 36 19 41265819 41265819 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083961 exon11 c.C1386T p.V462V . . . ZNF529 57711 broad.mit.edu 36 19 41730003 41730003 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145649 exon6 c.G1297A p.V433I . . . ZNF607 84775 broad.mit.edu 36 19 42881686 42881686 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032689 exon5 c.A1186T p.N396Y . . . SH3GL1 6455 broad.mit.edu 36 19 4317964 4317964 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003025 exon2 c.G73A p.E25K . . . SPINT2 10653 broad.mit.edu 36 19 43470396 43470396 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166103 exon2 c.G147A p.A49A . . . FAM98C 147965 broad.mit.edu 36 19 43588007 43588007 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174905 exon6 c.G642A p.L214L . . . RYR1 6261 broad.mit.edu 36 19 43728939 43728939 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042723 exon87 c.C12012T p.I4004I . . . SAMD4B 55095 broad.mit.edu 36 19 44552274 44552274 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018028 exon6 c.A336G p.S112S . . . PLEKHG2 64857 broad.mit.edu 36 19 44597727 44597727 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022835 exon3 c.G365A p.R122H . . . FCGBP 8857 broad.mit.edu 36 19 45125208 45125208 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003890 exon2 c.C901T p.P301S . . . AKT2 208 broad.mit.edu 36 19 45433084 45433084 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001626 exon12 c.C1189T p.P397S . . . SERTAD3 29946 broad.mit.edu 36 19 45639334 45639334 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203344 exon2 c.G494T p.R165L . . . SPTBN4 57731 broad.mit.edu 36 19 45687833 45687833 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020971 exon4 c.G333A p.T111T . . . HNRNPUL1 11100 broad.mit.edu 36 19 46466005 46466005 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144732 exon2 c.C33T p.Y11Y . . . DPP9 91039 broad.mit.edu 36 19 4655161 4655161 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139159 exon6 c.C582T p.G194G . . . B3GNT8 374907 broad.mit.edu 36 19 46623415 46623415 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198540 exon3 c.G1109A p.R370H . . . CIC 23152 broad.mit.edu 36 19 47484900 47484900 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015125 exon7 c.G952A p.V318I . . . PSG6 5675 broad.mit.edu 36 19 48277048 48277048 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031246 exon2 c.C255T p.D85D . . . CADM4 199731 broad.mit.edu 36 19 48819355 48819355 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145296 exon9 c.C1134T p.D378D . . . C19orf61 56006 broad.mit.edu 36 19 48943748 48943748 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019108 exon4 c.G367A p.A123T . . . ZNF227 7770 broad.mit.edu 36 19 49432420 49432420 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182490 exon6 c.G1997A p.G666E . . . EXOC3L2 90332 broad.mit.edu 36 19 50408376 50408376 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138568 exon10 c.C1021T p.R341W . . . CKM 1158 broad.mit.edu 36 19 50501958 50501958 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001824 exon8 c.G1036A p.E346K . . . ERCC1 2067 broad.mit.edu 36 19 50618425 50618425 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001983 exon2 c.G48A p.P16P . . . NOVA2 4858 broad.mit.edu 36 19 51135974 51135974 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002516 exon4 c.G466A p.V156M . . . CCDC61 729440 broad.mit.edu 36 19 51211443 51211443 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080402 exon10 c.C1100T p.T367M . . . NPAS1 4861 broad.mit.edu 36 19 52234159 52234159 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002517 exon6 c.C714T p.P238P . . . SAE1 10055 broad.mit.edu 36 19 52404259 52404259 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145713 exon7 c.C737T p.P246L . . . SLC8A2 6543 broad.mit.edu 36 19 52633016 52633016 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015063 exon7 c.G1912A p.E638K . . . GRWD1 83743 broad.mit.edu 36 19 53647947 53647947 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031485 exon7 c.C1194T p.P398P . . . FAM83E 54854 broad.mit.edu 36 19 53796210 53796210 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017708 exon5 c.G1405C p.A469P . . . IZUMO1 284359 broad.mit.edu 36 19 53939607 53939607 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182575 exon4 c.C312T p.G104G . . . BCAT2 587 broad.mit.edu 36 19 53995135 53995135 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164773 exon3 c.G170A p.R57H . . . ALDH16A1 126133 broad.mit.edu 36 19 54659536 54659536 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153329 exon11 c.C1382T p.S461L . . . AP2A1 160 broad.mit.edu 36 19 54977033 54977033 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130787 exon3 c.G154T p.G52C . . . NUP62 23636 broad.mit.edu 36 19 55104209 55104209 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012346 exon2 c.C668A p.A223E . . . MYH14 79784 broad.mit.edu 36 19 55467631 55467631 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077186 exon26 c.C3199T p.R1067C . . . MYH14 79784 broad.mit.edu 36 19 55473300 55473300 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077186 exon29 c.G3875A p.R1292Q . . . MYBPC2 4606 broad.mit.edu 36 19 55630892 55630892 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004533 exon3 c.G157A p.V53I . . . MYBPC2 4606 broad.mit.edu 36 19 55638579 55638579 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004533 exon10 c.G919A p.V307I . . . GPR32 2854 broad.mit.edu 36 19 55965708 55965708 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001506 exon1 c.C39T p.D13D . . . KLK11 11012 broad.mit.edu 36 19 56217692 56217692 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136032 exon6 c.C674T p.A225V . . . TMEM146 257062 broad.mit.edu 36 19 5696965 5696965 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152784 exon9 c.C699T p.F233F . . . FPR3 2359 broad.mit.edu 36 19 57019526 57019526 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002030 exon2 c.G713A p.R238H . . . DUS3L 56931 broad.mit.edu 36 19 5738321 5738321 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161619 exon6 c.C538T p.R180C . . . PPP2R1A 5518 broad.mit.edu 36 19 57407794 57407794 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014225 exon5 c.C547T p.R183W . . . ZNF808 388558 broad.mit.edu 36 19 57748942 57748942 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039886 exon5 c.G961T p.G321C . . . ZNF415 55786 broad.mit.edu 36 19 58303739 58303739 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136038 exon4 c.C1371T p.T457T . . . ZNF761 388561 broad.mit.edu 36 19 58651398 58651398 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008401 exon6 c.A1826G p.X609X . . . PRKCG 5582 broad.mit.edu 36 19 59093574 59093574 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002739 exon11 c.C1161T p.I387I . . . TFPT 29844 broad.mit.edu 36 19 59303319 59303319 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013342 exon5 c.G468A p.A156A . . . LILRB2 10288 broad.mit.edu 36 19 59474613 59474613 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080978 exon6 c.C821T p.A274V . . . RFX2 5990 broad.mit.edu 36 19 5955288 5955288 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000635 exon13 c.G1424A p.R475H . . . KIR3DL1 3811 broad.mit.edu 36 19 60021686 60021686 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013289 exon3 c.A175G p.M59V . . . NLRP7 199713 broad.mit.edu 36 19 60143380 60143380 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139176 exon4 c.G619A p.A207T . . . NLRP2 55655 broad.mit.edu 36 19 60188374 60188374 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174083 exon8 c.C2109T p.D703D . . . C19orf51 352909 broad.mit.edu 36 19 60362539 60362539 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178837 exon12 c.C1470T p.T490T . . . PPP6R1 22870 broad.mit.edu 36 19 60439964 60439964 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014931 exon17 c.G1847A p.R616H . . . NLRP9 338321 broad.mit.edu 36 19 60912135 60912135 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176820 exon9 c.A2931G p.G977G . . . NLRP4 147945 broad.mit.edu 36 19 61070998 61070998 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134444 exon6 c.C2298T p.G766G . . . NLRP5 126206 broad.mit.edu 36 19 61230808 61230808 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153447 exon7 c.A1397G p.D466G . . . ZNF667 63934 broad.mit.edu 36 19 61644567 61644567 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022103 exon5 c.A1609C p.S537R . . . ZNF543 125919 broad.mit.edu 36 19 62531989 62531989 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213598 exon4 c.A1347C p.K449N . . . VN1R1 57191 broad.mit.edu 36 19 62658678 62658678 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020633 exon1 c.C989T p.T330I . . . ZNF773 374928 broad.mit.edu 36 19 62710306 62710306 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198542 exon4 c.C1031A p.S344Y . . . TUBB4 10382 broad.mit.edu 36 19 6446277 6446277 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006087 exon4 c.C1233T p.A411A . . . SH2D3A 10045 broad.mit.edu 36 19 6711878 6711878 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005490 exon3 c.C190T p.R64C . . . VAV1 7409 broad.mit.edu 36 19 6773293 6773293 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005428 exon5 c.G511A p.D171N . . . INSR 3643 broad.mit.edu 36 19 7218488 7218488 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000208 exon2 c.T520C p.L174L . . . ARHGEF18 23370 broad.mit.edu 36 19 7415252 7415252 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015318 exon5 c.G485A p.R162Q . . . MYO1F 4542 broad.mit.edu 36 19 8522651 8522651 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012335 exon8 c.C744T p.D248D . . . MUC16 94025 broad.mit.edu 36 19 8878354 8878354 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon26 c.A37970G p.Y12657C . . . ABCA7 10347 broad.mit.edu 36 19 994731 994731 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019112 exon10 c.G938A p.R313Q . . . RRAGC 64121 broad.mit.edu 36 1 39097738 39097739 + Frame_Shift_Ins INS - C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022157 exon1 c.168_169insG p.G56fs . . . EXTL2 2135 broad.mit.edu 36 1 101115703 101115703 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033025 exon3 c.A350G p.H117R . . . PRMT6 55170 broad.mit.edu 36 1 107401857 107401857 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018137 exon1 c.C997T p.Q333X . . . VAV3 10451 broad.mit.edu 36 1 108308860 108308860 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006113 exon1 c.C155T p.A52V . . . C1orf127 148345 broad.mit.edu 36 1 10930442 10930442 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170754 exon12 c.C2337T p.Y779Y . . . TAF13 6884 broad.mit.edu 36 1 109408818 109408818 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005645 exon4 c.T225C p.I75I . . . SORT1 6272 broad.mit.edu 36 1 109671712 109671712 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002959 exon12 c.C1406T p.S469F . . . AMIGO1 57463 broad.mit.edu 36 1 109852689 109852689 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020703 exon2 c.T369C p.R123R . . . FAM40A 85369 broad.mit.edu 36 1 110383544 110383544 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033088 exon5 c.G465A p.T155T . . . SRM 6723 broad.mit.edu 36 1 11039366 11039366 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003132 exon4 c.C417T p.G139G . . . CD53 963 broad.mit.edu 36 1 111236574 111236574 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000560 exon3 c.C148A p.L50I . . . DRAM2 128338 broad.mit.edu 36 1 111462327 111462327 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178454 exon9 c.G779A p.R260Q . . . PTCHD2 57540 broad.mit.edu 36 1 11483665 11483665 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020780 exon2 c.A29G p.Q10R . . . DENND2C 163259 broad.mit.edu 36 1 114967734 114967734 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198459 exon3 c.C860T p.T287M . . . CSDE1 7812 broad.mit.edu 36 1 115070473 115070473 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130523 exon14 c.C1567T p.R523X . . . ATP1A1 476 broad.mit.edu 36 1 116737816 116737816 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000701 exon12 c.C1608T p.D536D . . . PTGFRN 5738 broad.mit.edu 36 1 117289071 117289071 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020440 exon3 c.C666T p.L222L . . . TTF2 8458 broad.mit.edu 36 1 117419716 117419716 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003594 exon5 c.G987A p.A329A . . . TTF2 8458 broad.mit.edu 36 1 117419788 117419788 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003594 exon5 c.C1059T p.D353D . . . MTHFR 4524 broad.mit.edu 36 1 11777880 11777880 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005957 exon6 c.G893A p.G298D . . . MFN2 9927 broad.mit.edu 36 1 11989760 11989760 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127660 exon16 c.G1936A p.V646I . . . VPS13D 55187 broad.mit.edu 36 1 12260332 12260332 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon19 c.C4100T p.S1367L . . . VPS13D 55187 broad.mit.edu 36 1 12341190 12341190 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon49 c.C10012T p.R3338X . . . DVL1 1855 broad.mit.edu 36 1 1265500 1265500 + Silent SNP C T T rs1140338 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004421 exon7 c.G759A p.T253T . . . PRAMEF13 400736 broad.mit.edu 36 1 13541647 13541647 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099854 exon4 c.C1126T p.R376C . . . PRDM2 7799 broad.mit.edu 36 1 14015520 14015520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012231 exon9 c.G5048A p.R1683H . . . BCL9 607 broad.mit.edu 36 1 145557997 145557997 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004326 exon8 c.C1412T p.A471V . . . NBPF15 284565 broad.mit.edu 36 1 146857941 146857941 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001102663 exon12 c.G1382A p.S461N . . . MTMR11 10903 broad.mit.edu 36 1 148169841 148169841 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181873 exon12 c.C1009T p.R337X . . . RPRD2 23248 broad.mit.edu 36 1 148683387 148683387 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015203 exon6 c.C604T p.R202C . . . BNIPL 149428 broad.mit.edu 36 1 149277950 149277950 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159642 exon4 c.G11A p.R4H . . . CDC42SE1 56882 broad.mit.edu 36 1 149294134 149294134 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001038707 exon4 c.C147T p.A49A . . . SEMA6C 10500 broad.mit.edu 36 1 149374692 149374692 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178061 exon14 c.C1432T p.R478W . . . POGZ 23126 broad.mit.edu 36 1 149667450 149667450 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145796 exon4 c.C347A p.P116H . . . CGN 57530 broad.mit.edu 36 1 149763927 149763927 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020770 exon8 c.C1555T p.R519W . . . HRNR 388697 broad.mit.edu 36 1 150458682 150458682 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009931 exon3 c.G2047A p.G683S . . . FLG 2312 broad.mit.edu 36 1 150544267 150544267 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.G9719A p.R3240H . . . FLG 2312 broad.mit.edu 36 1 150552524 150552524 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.A1462G p.S488G . . . PGLYRP4 57115 broad.mit.edu 36 1 151579671 151579671 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020393 exon7 c.G634A p.G212S . . . NPR1 4881 broad.mit.edu 36 1 151929057 151929057 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000906 exon19 c.G2909A p.R970H . . . DENND4B 9909 broad.mit.edu 36 1 152179316 152179316 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014856 exon11 c.C1543T p.R515C . . . CRTC2 200186 broad.mit.edu 36 1 152190437 152190437 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181715 exon11 c.G1327A p.D443N . . . CRTC2 200186 broad.mit.edu 36 1 152190628 152190628 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181715 exon11 c.G1136A p.R379H . . . TPM3 7170 broad.mit.edu 36 1 152398146 152398146 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001043353 exon8 c.C667T p.R223C . . . UBAP2L 9898 broad.mit.edu 36 1 152500057 152500057 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014847 exon23 c.C2644G p.P882A . . . HAX1 10456 broad.mit.edu 36 1 152512578 152512578 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006118 exon2 c.A196G p.S66G . . . KCNN3 3782 broad.mit.edu 36 1 153011472 153011472 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170782 exon3 c.G136A p.A46T . . . KAZ 23254 broad.mit.edu 36 1 15313646 15313646 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201628 exon15 c.C2256T p.D752D . . . DCST2 127579 broad.mit.edu 36 1 153269633 153269633 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144622 exon6 c.G918T p.M306I . . . SCAMP3 10067 broad.mit.edu 36 1 153497024 153497024 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052837 exon2 c.A117G p.S39S . . . ASH1L 55870 broad.mit.edu 36 1 153574785 153574785 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018489 exon27 c.G8522A p.R2841H . . . IQGAP3 128239 broad.mit.edu 36 1 154784568 154784568 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178229 exon19 c.G2225A p.R742H . . . TTC24 164118 broad.mit.edu 36 1 154822417 154822417 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105669 exon10 c.G1623A p.A541A . . . NTRK1 4914 broad.mit.edu 36 1 155115640 155115640 + Silent SNP G A A rs17838192 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012331 exon14 c.G1890A p.A630A . . . C1orf92 149499 broad.mit.edu 36 1 155164035 155164035 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144702 exon7 c.C786A p.N262K . . . FCRL4 83417 broad.mit.edu 36 1 155822783 155822783 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031282 exon6 c.G934A p.V312M . . . FCRL4 83417 broad.mit.edu 36 1 155823811 155823811 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031282 exon5 c.G726A p.T242T . . . CD1C 911 broad.mit.edu 36 1 156526538 156526538 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001765 exon1 c.C60T p.D20D . . . CD48 962 broad.mit.edu 36 1 158921566 158921566 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001778 exon2 c.C120T p.N40N . . . ITLN1 55600 broad.mit.edu 36 1 159118424 159118424 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017625 exon4 c.G352A p.A118T . . . SLC25A34 284723 broad.mit.edu 36 1 15937214 15937214 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207348 exon3 c.G484T p.G162W . . . USP21 27005 broad.mit.edu 36 1 159401489 159401489 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012475 exon12 c.C1539T p.S513S . . . OLFML2B 25903 broad.mit.edu 36 1 160220123 160220123 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015441 exon8 c.A2219G p.H740R . . . UHMK1 127933 broad.mit.edu 36 1 160736419 160736419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175866 exon2 c.C319T p.R107C . . . LRRC52 440699 broad.mit.edu 36 1 163780366 163780366 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005214 exon1 c.C209T p.A70V . . . FBXO42 54455 broad.mit.edu 36 1 16450459 16450459 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018994 exon10 c.G1447C p.A483P . . . CD247 919 broad.mit.edu 36 1 165674463 165674463 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198053 exon4 c.C268T p.R90C . . . MPZL1 9019 broad.mit.edu 36 1 166001584 166001584 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024569 exon2 c.C232T p.P78S . . . GPR161 23432 broad.mit.edu 36 1 166340659 166340659 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153832 exon4 c.G54T p.E18D . . . NECAP2 55707 broad.mit.edu 36 1 16654920 16654920 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018090 exon7 c.C688T p.P230S . . . C1orf129 80133 broad.mit.edu 36 1 169234110 169234110 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025063 exon15 c.A1667T p.Q556L . . . BAT2L2 23215 broad.mit.edu 36 1 169771866 169771866 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015172 exon14 c.G2112A p.P704P . . . SDHB 6390 broad.mit.edu 36 1 17223071 17223071 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003000 exon6 c.C626A p.P209H . . . TNR 7143 broad.mit.edu 36 1 173565861 173565861 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003285 exon21 c.C3765T p.L1255L . . . RALGPS2 55103 broad.mit.edu 36 1 177113329 177113329 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152663 exon9 c.A681G p.Q227Q . . . ABL2 27 broad.mit.edu 36 1 177357479 177357479 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168239 exon4 c.C726T p.H242H . . . XPR1 9213 broad.mit.edu 36 1 179060938 179060938 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135669 exon9 c.C969T p.L323L . . . CACNA1E 777 broad.mit.edu 36 1 180007900 180007900 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000721 exon37 c.C5049T p.T1683T . . . CACNA1E 777 broad.mit.edu 36 1 180030743 180030743 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000721 exon45 c.C6019T p.R2007C . . . RGS16 6004 broad.mit.edu 36 1 180836078 180836078 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002928 exon5 c.G581A p.C194Y . . . RGL1 23179 broad.mit.edu 36 1 182133636 182133636 + Silent SNP G C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015149 exon11 c.G1317C p.L439L . . . TPR 7175 broad.mit.edu 36 1 184596652 184596652 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003292 exon10 c.G967T p.A323S . . . KLHDC7A 127707 broad.mit.edu 36 1 18682143 18682143 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152375 exon1 c.G2081A p.R694H . . . CDC73 79577 broad.mit.edu 36 1 191371187 191371187 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024529 exon4 c.T351C p.G117G . . . CFH 3075 broad.mit.edu 36 1 194972665 194972665 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000186 exon16 c.A2502G p.K834K . . . CRB1 23418 broad.mit.edu 36 1 195678006 195678006 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201253 exon11 c.C3966T p.L1322L . . . NR5A2 2494 broad.mit.edu 36 1 198347006 198347006 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205860 exon6 c.C1164T p.L388L . . . KIF14 9928 broad.mit.edu 36 1 198837663 198837663 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014875 exon11 c.C2136T p.N712N . . . ATP2B4 493 broad.mit.edu 36 1 201943687 201943687 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001396 exon10 c.C1389T p.C463C . . . PIK3C2B 5287 broad.mit.edu 36 1 202683262 202683262 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002646 exon16 c.G2414A p.R805H . . . NFASC 23114 broad.mit.edu 36 1 203190084 203190084 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160331 exon3 c.C343T p.R115C . . . PM20D1 148811 broad.mit.edu 36 1 204064410 204064410 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152491 exon13 c.C1470T p.D490D . . . AVPR1B 553 broad.mit.edu 36 1 204391896 204391896 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000707 exon1 c.G833A p.R278Q . . . SRGAP2 23380 broad.mit.edu 36 1 204678063 204678063 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170637 exon13 c.C1497A p.G499G . . . IKBKE 9641 broad.mit.edu 36 1 204714371 204714371 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193322 exon4 c.G162T p.R54S . . . IKBKE 9641 broad.mit.edu 36 1 204714951 204714951 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193322 exon5 c.C349T p.R117C . . . C4BPA 722 broad.mit.edu 36 1 205353090 205353090 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000715 exon2 c.C97A p.L33I . . . CR2 1380 broad.mit.edu 36 1 205708773 205708773 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006658 exon4 c.C640T p.R214C . . . PLXNA2 5362 broad.mit.edu 36 1 206278941 206278941 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025179 exon25 c.C4512T p.C1504C . . . HHAT 55733 broad.mit.edu 36 1 208827991 208827991 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018194 exon10 c.G1170A p.A390A . . . KCNH1 3756 broad.mit.edu 36 1 209259011 209259011 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002238 exon6 c.G769A p.V257M . . . HP1BP3 50809 broad.mit.edu 36 1 20944028 20944028 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016287 exon13 c.C1511T p.T504M . . . RD3 343035 broad.mit.edu 36 1 209719199 209719199 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164688 exon3 c.G390A p.K130K . . . INTS7 25896 broad.mit.edu 36 1 210218370 210218370 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199809 exon10 c.G1190A p.R397Q . . . PTPN14 5784 broad.mit.edu 36 1 212633698 212633698 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005401 exon10 c.C892T p.R298X . . . USH2A 7399 broad.mit.edu 36 1 214038963 214038963 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon50 c.C9867T p.G3289G . . . SUSD4 55061 broad.mit.edu 36 1 221603326 221603326 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037175 exon2 c.A65G p.Q22R . . . LBR 3930 broad.mit.edu 36 1 223666914 223666914 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194442 exon8 c.G949A p.V317I . . . TMEM63A 9725 broad.mit.edu 36 1 224101408 224101408 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014698 exon24 c.C2380T p.Q794X . . . LIN9 286826 broad.mit.edu 36 1 224520605 224520605 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173083 exon9 c.C916T p.R306W . . . PARP1 142 broad.mit.edu 36 1 224631601 224631601 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001618 exon13 c.G1772A p.R591H . . . CDC42BPA 8476 broad.mit.edu 36 1 225399909 225399909 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014826 exon8 c.T1047C p.D349D . . . ACTA1 58 broad.mit.edu 36 1 227634261 227634261 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100 exon6 c.G820A p.A274T . . . NUP133 55746 broad.mit.edu 36 1 227667218 227667218 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018230 exon18 c.C2327T p.T776M . . . TTC13 79573 broad.mit.edu 36 1 229156731 229156731 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024525 exon4 c.G484A p.A162T . . . TRIM67 440730 broad.mit.edu 36 1 229365362 229365362 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004342 exon1 c.C24T p.P8P . . . SIPA1L2 57568 broad.mit.edu 36 1 230628149 230628149 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020808 exon16 c.G4439T p.R1480M . . . SIPA1L2 57568 broad.mit.edu 36 1 230667675 230667675 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020808 exon7 c.T2354A p.I785N . . . PCNXL2 80003 broad.mit.edu 36 1 231460587 231460587 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014801 exon5 c.T1644C p.I548I . . . PCNXL2 80003 broad.mit.edu 36 1 231461406 231461406 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014801 exon5 c.G825A p.P275P . . . SLC35F3 148641 broad.mit.edu 36 1 232433890 232433890 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173508 exon3 c.G388T p.A130S . . . MTR 4548 broad.mit.edu 36 1 235121175 235121175 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000254 exon29 c.G3127A p.D1043N . . . RYR2 6262 broad.mit.edu 36 1 235560837 235560837 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon3 c.C205T p.L69L . . . CHRM3 1131 broad.mit.edu 36 1 238137574 238137574 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000740 exon5 c.A200G p.Q67R . . . FMN2 56776 broad.mit.edu 36 1 238437549 238437549 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020066 exon5 c.C2814T p.P938P . . . FH 2271 broad.mit.edu 36 1 239734120 239734120 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000143 exon7 c.A953G p.H318R . . . HMGCL 3155 broad.mit.edu 36 1 24007368 24007368 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166059 exon5 c.C381T p.Y127Y . . . ZNF496 84838 broad.mit.edu 36 1 245530694 245530694 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032752 exon9 c.C1514T p.A505V . . . OR2T8 343172 broad.mit.edu 36 1 246151527 246151527 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005522 exon1 c.C585T p.N195N . . . UBXN11 91544 broad.mit.edu 36 1 26481993 26481993 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077262 exon9 c.G740A p.R247Q . . . LIN28A 79727 broad.mit.edu 36 1 26610618 26610618 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024674 exon2 c.C186T p.A62A . . . ARID1A 8289 broad.mit.edu 36 1 26960090 26960090 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006015 exon5 c.C2077T p.R693X . . . AHDC1 27245 broad.mit.edu 36 1 27747644 27747644 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029882 exon6 c.A3570G p.S1190S . . . COL16A1 1307 broad.mit.edu 36 1 31924282 31924282 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001856 exon28 c.G1881A p.A627A . . . KHDRBS1 10657 broad.mit.edu 36 1 32271388 32271388 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006559 exon4 c.C637T p.R213C . . . YARS 8565 broad.mit.edu 36 1 33020661 33020661 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003680 exon9 c.C973T p.R325W . . . PRDM16 63976 broad.mit.edu 36 1 3303016 3303016 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022114 exon5 c.C675T p.D225D . . . HPCA 3208 broad.mit.edu 36 1 33127112 33127112 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002143 exon2 c.G26A p.R9Q . . . CSMD2 114784 broad.mit.edu 36 1 33805820 33805820 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon54 c.G8271A p.Q2757Q . . . GJB4 127534 broad.mit.edu 36 1 34999653 34999653 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153212 exon2 c.G211A p.V71M . . . TEKT2 27285 broad.mit.edu 36 1 36325426 36325426 + Missense_Mutation SNP C T T rs41267269 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014466 exon7 c.C782T p.T261M . . . LRRC47 57470 broad.mit.edu 36 1 3693353 3693353 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020710 exon2 c.C997T p.R333W . . . C1orf174 339448 broad.mit.edu 36 1 3796408 3796408 + Silent SNP G A A rs61737469 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207356 exon4 c.C708T p.D236D . . . MACF1 23499 broad.mit.edu 36 1 39685707 39685707 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012090 exon78 c.C13445T p.A4482V . . . CCDC30 728621 broad.mit.edu 36 1 42883030 42883030 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080850 exon13 c.C1855T p.R619X . . . TIE1 7075 broad.mit.edu 36 1 43551602 43551602 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005424 exon13 c.C2137T p.R713C . . . SLC6A9 6536 broad.mit.edu 36 1 44235861 44235861 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201649 exon14 c.G2064A p.A688A . . . DMAP1 55929 broad.mit.edu 36 1 44457416 44457416 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034023 exon7 c.G822A p.A274A . . . HECTD3 79654 broad.mit.edu 36 1 45247420 45247420 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024602 exon7 c.G1055A p.R352H . . . RAD54L 8438 broad.mit.edu 36 1 46505781 46505781 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142548 exon10 c.C955T p.R319W . . . FAAH 2166 broad.mit.edu 36 1 46646834 46646834 + Silent SNP G T T rs45476901 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001441 exon8 c.G1068T p.A356A . . . CDKN2C 1031 broad.mit.edu 36 1 51212253 51212253 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_078626 exon2 c.C230T p.A77V . . . ORC1 4998 broad.mit.edu 36 1 52626771 52626771 + Silent SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190818 exon8 c.T1314G p.T438T . . . HSPB11 51668 broad.mit.edu 36 1 54159953 54159953 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016126 exon6 c.G394A p.V132I . . . DAB1 1600 broad.mit.edu 36 1 57249037 57249037 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021080 exon16 c.G1587T p.Q529H . . . NPHP4 261734 broad.mit.edu 36 1 5888320 5888320 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015102 exon14 c.G1722A p.T574T . . . MYSM1 114803 broad.mit.edu 36 1 58911896 58911896 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085487 exon11 c.T1509C p.R503R . . . INADL 10207 broad.mit.edu 36 1 62102498 62102498 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176877 exon20 c.G2440A p.G814R . . . GPR153 387509 broad.mit.edu 36 1 6233134 6233134 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207370 exon5 c.C1117T p.L373F . . . ROR1 4919 broad.mit.edu 36 1 64417079 64417079 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005012 exon9 c.G2767T p.A923S . . . RAVER2 55225 broad.mit.edu 36 1 65016111 65016111 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018211 exon3 c.T534C p.V178V . . . LEPR 3953 broad.mit.edu 36 1 65859670 65859670 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003679 exon18 c.G2538A p.V846V . . . DNAJC11 55735 broad.mit.edu 36 1 6650424 6650424 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018198 exon4 c.C310T p.R104X . . . ELTD1 64123 broad.mit.edu 36 1 79129943 79129943 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022159 exon14 c.G1864A p.A622T . . . PARK7 11315 broad.mit.edu 36 1 7948023 7948023 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007262 exon3 c.G143A p.R48H . . . LPHN2 23266 broad.mit.edu 36 1 82181826 82181826 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012302 exon5 c.A983G p.Y328C . . . LPAR3 23566 broad.mit.edu 36 1 85103755 85103755 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012152 exon2 c.G637A p.V213I . . . COL24A1 255631 broad.mit.edu 36 1 86296210 86296210 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152890 exon10 c.G1843T p.G615C . . . PKN2 5586 broad.mit.edu 36 1 89071645 89071645 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006256 exon22 c.C2881T p.R961X . . . AGRN 375790 broad.mit.edu 36 1 979177 979177 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198576 exon34 c.G5833A p.V1945M . . . PALMD 54873 broad.mit.edu 36 1 99927060 99927060 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017734 exon7 c.C656T p.A219V . . . OBSCN 84033 broad.mit.edu 36 1 226501091 226501091 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G - G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052843 exon13 c.3997delG p.G1333fs . . . RYR2 6262 broad.mit.edu 36 1 235844281 235844281 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon37 c.5230delA p.K1744fs . . . GBP5 115362 broad.mit.edu 36 1 89505716 89505716 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134486 exon4 c.400delA p.I134fs . . . PCSK2 5126 broad.mit.edu 36 20 17365497 17365497 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002594 exon8 c.C854T p.T285M . . . XRN2 22803 broad.mit.edu 36 20 21294263 21294263 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012255 exon26 c.C2377T p.R793W . . . ACSS1 84532 broad.mit.edu 36 20 24937998 24937998 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032501 exon13 c.G1798A p.D600N . . . ACSS1 84532 broad.mit.edu 36 20 24941513 24941513 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032501 exon11 c.C1642T p.R548W . . . ZNF337 26152 broad.mit.edu 36 20 25605018 25605018 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015655 exon5 c.C906T p.N302N . . . NRSN2 80023 broad.mit.edu 36 20 281980 281980 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024958 exon4 c.G316T p.A106S . . . TTLL9 164395 broad.mit.edu 36 20 29960056 29960056 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008409 exon5 c.G208A p.E70K . . . C20orf160 140706 broad.mit.edu 36 20 30066402 30066402 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080625 exon2 c.C65T p.P22L . . . C20orf112 140688 broad.mit.edu 36 20 30503766 30503766 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080616 exon7 c.G1024A p.G342R . . . ProSAPiP1 9762 broad.mit.edu 36 20 3094855 3094855 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014731 exon2 c.G611A p.R204Q . . . SLC4A11 83959 broad.mit.edu 36 20 3162824 3162824 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174090 exon5 c.T557G p.F186C . . . TRPC4AP 26133 broad.mit.edu 36 20 33096094 33096094 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199368 exon7 c.G740A p.R247Q . . . MMP24 10893 broad.mit.edu 36 20 33305950 33305950 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006690 exon4 c.C635T p.T212M . . . CEP250 11190 broad.mit.edu 36 20 33555856 33555856 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007186 exon30 c.A6245G p.Q2082R . . . CEP250 11190 broad.mit.edu 36 20 33556079 33556079 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007186 exon30 c.G6468T p.Q2156H . . . NFS1 9054 broad.mit.edu 36 20 33726505 33726505 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021100 exon8 c.G824A p.R275H . . . SAMHD1 25939 broad.mit.edu 36 20 34978559 34978559 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015474 exon9 c.C1042T p.R348C . . . KIAA1755 85449 broad.mit.edu 36 20 36301411 36301411 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029864 exon4 c.A1680G p.P560P . . . HSPA12B 116835 broad.mit.edu 36 20 3670951 3670951 + Silent SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197327 exon4 c.C162A p.P54P . . . FAM83D 81610 broad.mit.edu 36 20 37014410 37014410 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030919 exon4 c.C1681T p.R561W . . . PLCG1 5335 broad.mit.edu 36 20 39231548 39231548 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002660 exon23 c.G2618A p.R873Q . . . ZHX3 23051 broad.mit.edu 36 20 39264173 39264173 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015035 exon3 c.G2798A p.R933H . . . MYBL2 4605 broad.mit.edu 36 20 41764584 41764584 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002466 exon8 c.C992A p.P331H . . . ZSWIM3 140831 broad.mit.edu 36 20 43940620 43940620 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080752 exon2 c.C2016T p.G672G . . . ZNF335 63925 broad.mit.edu 36 20 44022738 44022738 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022095 exon12 c.G1706A p.R569H . . . SLC12A5 57468 broad.mit.edu 36 20 44099357 44099357 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020708 exon6 c.G538A p.V180M . . . SLC35C2 51006 broad.mit.edu 36 20 44412508 44412508 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173073 exon10 c.C967T p.R323W . . . PREX1 57580 broad.mit.edu 36 20 46699515 46699515 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020820 exon25 c.T3035G p.L1012R . . . PREX1 57580 broad.mit.edu 36 20 46703317 46703317 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020820 exon20 c.G2335A p.E779K . . . ARFGEF2 10564 broad.mit.edu 36 20 47063533 47063533 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006420 exon29 c.A3944G p.D1315G . . . SPATA2 9825 broad.mit.edu 36 20 47956153 47956153 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135773 exon3 c.C973T p.R325C . . . ADNP 23394 broad.mit.edu 36 20 48944198 48944198 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015339 exon5 c.C460T p.P154S . . . ATP9A 10079 broad.mit.edu 36 20 49721198 49721198 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006045 exon12 c.G1043A p.R348H . . . SALL4 57167 broad.mit.edu 36 20 49839983 49839983 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020436 exon2 c.C2446T p.R816C . . . GPCPD1 56261 broad.mit.edu 36 20 5507069 5507069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019593 exon8 c.C662T p.T221M . . . CTCFL 140690 broad.mit.edu 36 20 55532490 55532490 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080618 exon2 c.G178A p.V60I . . . ZBP1 81030 broad.mit.edu 36 20 55618798 55618798 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160417 exon7 c.G903A p.S301S . . . NPEPL1 79716 broad.mit.edu 36 20 56702957 56702957 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024663 exon3 c.C410T p.P137L . . . C20orf177 63939 broad.mit.edu 36 20 57952979 57952979 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190826 exon5 c.G586A p.V196I . . . CDH26 60437 broad.mit.edu 36 20 57993229 57993229 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177980 exon6 c.C682T p.R228X . . . CDH4 1002 broad.mit.edu 36 20 59882234 59882234 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001794 exon7 c.C933T p.N311N . . . C20orf151 140893 broad.mit.edu 36 20 60424239 60424239 + Nonsense_Mutation SNP C A A rs6121579 byHapMap TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080833 exon7 c.G544T p.E182X . . . DIDO1 11083 broad.mit.edu 36 20 61009051 61009051 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022105 exon5 c.G1267A p.A423T . . . C20orf54 113278 broad.mit.edu 36 20 693857 693857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033409 exon2 c.G562A p.A188T . . . LTN1 26046 broad.mit.edu 36 21 29261266 29261266 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015565 exon10 c.C1556T p.T519M . . . LTN1 26046 broad.mit.edu 36 21 29280960 29280960 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015565 exon2 c.G347A p.R116Q . . . TIAM1 7074 broad.mit.edu 36 21 31546317 31546317 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003253 exon6 c.C1023T p.T341T . . . GCFC1 94104 broad.mit.edu 36 21 33045360 33045360 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013329 exon9 c.C1548T p.R516R . . . ATP5O 539 broad.mit.edu 36 21 34201540 34201540 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001697 exon5 c.T416C p.V139A . . . DSCAM 1826 broad.mit.edu 36 21 40368950 40368950 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001389 exon27 c.A4772C p.E1591A . . . MX2 4600 broad.mit.edu 36 21 41689495 41689495 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002463 exon7 c.G983A p.R328Q . . . MX1 4599 broad.mit.edu 36 21 41729750 41729750 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144925 exon8 c.C222T p.A74A . . . C2CD2 25966 broad.mit.edu 36 21 42200947 42200947 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199050 exon8 c.C569T p.A190V . . . UBASH3A 53347 broad.mit.edu 36 21 42736497 42736497 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001895 exon12 c.G1524A p.A508A . . . WDR4 10785 broad.mit.edu 36 21 43152864 43152864 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033661 exon6 c.G604A p.G202R . . . SIK1 150094 broad.mit.edu 36 21 43665988 43665988 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173354 exon5 c.G457A p.E153K . . . C21orf33 8209 broad.mit.edu 36 21 44389184 44389184 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198155 exon6 c.C639T p.C213C . . . TRPM2 7226 broad.mit.edu 36 21 44662850 44662850 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003307 exon22 c.G3445A p.E1149K . . . KRTAP10-7 386675 broad.mit.edu 36 21 44845826 44845826 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198689 exon2 c.T862C p.C288R . . . COL18A1 80781 broad.mit.edu 36 21 45731831 45731831 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030582 exon16 c.C2416T p.R806X . . . LSS 4047 broad.mit.edu 36 21 46467014 46467014 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145437 exon3 c.G146A p.R49Q . . . MCM3AP 8888 broad.mit.edu 36 21 46510310 46510310 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003906 exon11 c.G2988A p.A996A . . . PCNT 5116 broad.mit.edu 36 21 46674494 46674494 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006031 exon36 c.C7833T p.S2611S . . . DIP2A 23181 broad.mit.edu 36 21 46796040 46796040 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146114 exon22 c.G2713A p.G905R . . . TPTE 7179 broad.mit.edu 36 21 9973240 9973240 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199259 exon9 c.T289A p.F97I . . . BRWD1 54014 broad.mit.edu 36 21 39589544 39589545 + Frame_Shift_Del DEL AG - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 AG AG AG - AG AG Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033656 exon7 c.603_604del p.201_202del . . . TBX1 6899 broad.mit.edu 36 22 18146797 18146798 + Frame_Shift_Ins INS - AG AG novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080646 exon9 c.1064_1065insAG p.P355fs . . . CECR2 27443 broad.mit.edu 36 22 16401577 16401577 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031413 exon14 c.C1870T p.P624S . . . MICAL3 57553 broad.mit.edu 36 22 16684842 16684842 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015241 exon24 c.G3402A p.S1134S . . . PPIL2 23759 broad.mit.edu 36 22 20371233 20371233 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148176 exon12 c.C843T p.Y281Y . . . CHCHD10 400916 broad.mit.edu 36 22 22438331 22438331 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213720 exon3 c.G393A p.Q131Q . . . MMP11 4320 broad.mit.edu 36 22 22455612 22455612 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005940 exon8 c.C1348A p.L450M . . . CABIN1 23523 broad.mit.edu 36 22 22786510 22786510 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199281 exon12 c.C1523T p.A508V . . . CABIN1 23523 broad.mit.edu 36 22 22821942 22821942 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199281 exon25 c.G3835A p.D1279N . . . MYO18B 84700 broad.mit.edu 36 22 24498327 24498327 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032608 exon7 c.C1719T p.V573V . . . MYO18B 84700 broad.mit.edu 36 22 24503603 24503603 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032608 exon8 c.G1923A p.Q641Q . . . ASPHD2 57168 broad.mit.edu 36 22 25160455 25160455 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020437 exon2 c.C874T p.R292X . . . NF2 4771 broad.mit.edu 36 22 28397836 28397836 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000268 exon11 c.C1021T p.R341X NF2,soft_tissue,nerve_sheath,Substitution - Nonsense,0 . . SEC14L4 284904 broad.mit.edu 36 22 29217872 29217872 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161368 exon10 c.G860A p.G287D . . . DEPDC5 9681 broad.mit.edu 36 22 30619604 30619604 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014662 exon38 c.A3977G p.D1326G . . . SLC5A4 6527 broad.mit.edu 36 22 30951682 30951682 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014227 exon12 c.T1409C p.V470A . . . SLC5A4 6527 broad.mit.edu 36 22 30956992 30956992 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014227 exon10 c.C1092T p.Y364Y . . . MYH9 4627 broad.mit.edu 36 22 35040168 35040168 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002473 exon13 c.C1522A p.L508M . . . TST 7263 broad.mit.edu 36 22 35737046 35737046 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003312 exon3 c.C862T p.R288C . . . ELFN2 114794 broad.mit.edu 36 22 36100486 36100486 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052906 exon3 c.C1035T p.I345I . . . SOX10 6663 broad.mit.edu 36 22 36699831 36699831 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006941 exon4 c.G1018A p.V340M . . . SLC16A8 23539 broad.mit.edu 36 22 36804402 36804402 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013356 exon5 c.G1454A p.R485Q . . . JOSD1 9929 broad.mit.edu 36 22 37413889 37413889 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014876 exon4 c.G573T p.E191D . . . APOBEC3C 27350 broad.mit.edu 36 22 37741617 37741617 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014508 exon2 c.G89A p.R30Q . . . APOBEC3C 27350 broad.mit.edu 36 22 37743907 37743907 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014508 exon3 c.G365A p.R122H . . . CBX7 23492 broad.mit.edu 36 22 37864601 37864601 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175709 exon4 c.C232T p.R78W . . . TNRC6B 23112 broad.mit.edu 36 22 38987897 38987897 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015088 exon4 c.C231T p.N77N . . . MKL1 57591 broad.mit.edu 36 22 39161457 39161457 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020831 exon5 c.C55T p.R19W . . . RANGAP1 5905 broad.mit.edu 36 22 39975292 39975292 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002883 exon15 c.C1682T p.A561V . . . POLDIP3 84271 broad.mit.edu 36 22 41311772 41311772 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178136 exon8 c.C1148T p.T383M . . . PACSIN2 11252 broad.mit.edu 36 22 41619475 41619475 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184971 exon3 c.G149A p.R50H . . . C22orf9 23313 broad.mit.edu 36 22 43980421 43980421 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015264 exon3 c.C268T p.R90W . . . ZBED4 9889 broad.mit.edu 36 22 48664257 48664257 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014838 exon2 c.C943T p.R315W . . . MLC1 23209 broad.mit.edu 36 22 48865383 48865383 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015166 exon2 c.G76A p.A26T . . . CPT1B 1375 broad.mit.edu 36 22 49359834 49359834 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152246 exon8 c.C839T p.A280V . . . SHANK3 85358 broad.mit.edu 36 22 49463936 49463936 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080420 exon4 c.C397T p.R133C . . . SHANK3 85358 broad.mit.edu 36 22 49464679 49464679 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080420 exon7 c.C842T p.A281V . . . MN1 4330 broad.mit.edu 36 22 26526403 26526403 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C - C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002430 exon1 c.129delG p.G43fs . . . NPAS2 4862 broad.mit.edu 36 2 100960679 100960679 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002518 exon15 c.G1468A p.A490T . . . TBC1D8 11138 broad.mit.edu 36 2 101016649 101016649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102426 exon10 c.C1562T p.A521V . . . ODC1 4953 broad.mit.edu 36 2 10499397 10499397 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002539 exon10 c.A1023G p.Q341Q . . . GPR45 11250 broad.mit.edu 36 2 105225631 105225631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007227 exon1 c.G884A p.R295H . . . UXS1 80146 broad.mit.edu 36 2 106128103 106128103 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025076 exon6 c.C432T p.D144D . . . RANBP2 5903 broad.mit.edu 36 2 108750085 108750085 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006267 exon20 c.C6658T p.P2220S . . . SH3RF3 344558 broad.mit.edu 36 2 109330658 109330658 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099289 exon2 c.C670T p.R224W . . . POLR1B 84172 broad.mit.edu 36 2 113049063 113049063 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137604 exon14 c.G2526A p.P842P . . . PSD4 23550 broad.mit.edu 36 2 113667350 113667350 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012455 exon8 c.G1964A p.R655Q . . . ACTR3 10096 broad.mit.edu 36 2 114425814 114425814 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005721 exon10 c.T999C p.R333R . . . DPP10 57628 broad.mit.edu 36 2 116242371 116242371 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178036 exon14 c.G992A p.G331D . . . GREB1 9687 broad.mit.edu 36 2 11684618 11684618 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014668 exon25 c.G4386A p.A1462A . . . TMEM37 140738 broad.mit.edu 36 2 119910966 119910966 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183240 exon2 c.G53A p.R18H . . . PTPN4 5775 broad.mit.edu 36 2 120408883 120408883 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002830 exon15 c.C1234T p.R412X . . . EPB41L5 57669 broad.mit.edu 36 2 120552587 120552587 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184937 exon10 c.C763A p.L255I . . . CNTNAP5 129684 broad.mit.edu 36 2 124716337 124716337 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130773 exon3 c.C278T p.T93M . . . CYP27C1 339761 broad.mit.edu 36 2 127667148 127667148 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001665 exon7 c.G994A p.V332M . . . TRIB2 28951 broad.mit.edu 36 2 12797933 12797933 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021643 exon3 c.C594T p.D198D . . . WDR33 55339 broad.mit.edu 36 2 128199128 128199128 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018383 exon9 c.G983A p.R328Q . . . AMMECR1L 83607 broad.mit.edu 36 2 128344938 128344938 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199140 exon5 c.C553T p.R185X . . . TUBA3D 113457 broad.mit.edu 36 2 131956724 131956724 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080386 exon5 c.G1186A p.D396N . . . NCKAP5 344148 broad.mit.edu 36 2 133256421 133256421 + Nonsense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207363 exon14 c.T4433A p.L1478X . . . NCKAP5 344148 broad.mit.edu 36 2 133264211 133264211 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207481 exon13 c.C947A p.P316H . . . LCT 3938 broad.mit.edu 36 2 136277986 136277986 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002299 exon11 c.C4647T p.Y1549Y . . . LCT 3938 broad.mit.edu 36 2 136286915 136286915 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002299 exon7 c.G1789A p.V597M . . . MCM6 4175 broad.mit.edu 36 2 136336741 136336741 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005915 exon8 c.G1126A p.V376I . . . LRP1B 53353 broad.mit.edu 36 2 140809742 140809742 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon78 c.G12028A p.V4010I . . . TPO 7173 broad.mit.edu 36 2 1479443 1479443 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175721 exon12 c.G2285A p.R762H . . . MBD5 55777 broad.mit.edu 36 2 148943145 148943145 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018328 exon9 c.A1163G p.Q388R . . . NEB 4703 broad.mit.edu 36 2 152079623 152079623 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon158 c.G22971A p.T7657T . . . NEB 4703 broad.mit.edu 36 2 152105112 152105112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon138 c.G20884A p.A6962T . . . CACNB4 785 broad.mit.edu 36 2 152435309 152435309 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145798 exon8 c.G681A p.P227P . . . GALNT5 11227 broad.mit.edu 36 2 157824168 157824168 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014568 exon1 c.G1328A p.R443H . . . TANC1 85461 broad.mit.edu 36 2 159743400 159743400 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033394 exon14 c.G1990A p.V664I . . . LY75 4065 broad.mit.edu 36 2 160443208 160443208 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198760 exon11 c.T1647A p.D549E . . . TBR1 10716 broad.mit.edu 36 2 161981367 161981367 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006593 exon1 c.A200T p.N67I . . . SLC4A10 57282 broad.mit.edu 36 2 162465758 162465758 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178016 exon12 c.G1376A p.R459Q . . . KCNH7 90134 broad.mit.edu 36 2 162988151 162988151 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173162 exon8 c.C2074T p.R692C . . . KCNH7 90134 broad.mit.edu 36 2 163069222 163069222 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173162 exon5 c.A1084G p.N362D . . . SLC38A11 151258 broad.mit.edu 36 2 165479937 165479937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173512 exon7 c.G547A p.V183M . . . SCN2A 6326 broad.mit.edu 36 2 165878392 165878392 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon8 c.T1051A p.Y351N . . . SCN2A 6326 broad.mit.edu 36 2 165909413 165909413 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon15 c.G2665A p.A889T . . . CSRNP3 80034 broad.mit.edu 36 2 166243900 166243900 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172173 exon7 c.G1149T p.E383D . . . XIRP2 129446 broad.mit.edu 36 2 167810889 167810889 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C4075T p.R1359X . . . LRP2 4036 broad.mit.edu 36 2 169798277 169798277 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon30 c.G4988A p.R1663H . . . LRP2 4036 broad.mit.edu 36 2 169809534 169809534 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon22 c.C3345T p.T1115T . . . LRP2 4036 broad.mit.edu 36 2 169855740 169855740 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon8 c.T783C p.H261H . . . KBTBD10 10324 broad.mit.edu 36 2 170079431 170079431 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006063 exon2 c.A1212G p.A404A . . . METAP1D 254042 broad.mit.edu 36 2 172636805 172636805 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199227 exon3 c.G319A p.V107I . . . SP3 6670 broad.mit.edu 36 2 174491613 174491613 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172712 exon5 c.C1777T p.R593W . . . SCRN3 79634 broad.mit.edu 36 2 174977085 174977085 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024583 exon5 c.C550T p.R184C . . . TTN 7273 broad.mit.edu 36 2 179104400 179104400 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon186 c.C77992A p.L25998M . . . TTN 7273 broad.mit.edu 36 2 179129831 179129831 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon158 c.C61100T p.S20367L . . . TTN 7273 broad.mit.edu 36 2 179157327 179157327 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon139 c.A38001G p.S12667S . . . TTN 7273 broad.mit.edu 36 2 179180137 179180137 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon106 c.C26242T p.Q8748X . . . TTN 7273 broad.mit.edu 36 2 179295437 179295437 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon74 c.G18590A p.R6197Q . . . KCNS3 3790 broad.mit.edu 36 2 17976440 17976440 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002252 exon3 c.G684A p.A228A . . . NT5C1B 93034 broad.mit.edu 36 2 18629401 18629401 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033253 exon4 c.G583A p.A195T . . . STAT1 6772 broad.mit.edu 36 2 191553610 191553610 + Missense_Mutation SNP G A A rs1803838 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007315 exon19 c.C1613T p.P538L . . . MYT1L 23040 broad.mit.edu 36 2 1925993 1925993 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015025 exon9 c.C273T p.D91D . . . HSPD1 3329 broad.mit.edu 36 2 198066398 198066398 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002156 exon7 c.A764G p.Q255R . . . HSPD1 3329 broad.mit.edu 36 2 198070230 198070230 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002156 exon3 c.C306A p.A102A . . . PUM2 23369 broad.mit.edu 36 2 20341903 20341903 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015317 exon12 c.C1879T p.P627S . . . PARD3B 117583 broad.mit.edu 36 2 205694761 205694761 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057177 exon8 c.C1008T p.T336T . . . GPR1 2825 broad.mit.edu 36 2 206749427 206749427 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098199 exon3 c.C790A p.L264M . . . HS1BP3 64342 broad.mit.edu 36 2 20688078 20688078 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022460 exon5 c.C679T p.R227W . . . ZDBF2 57683 broad.mit.edu 36 2 206882566 206882566 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.G5069A p.R1690Q . . . KLF7 8609 broad.mit.edu 36 2 207661508 207661508 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003709 exon3 c.G776A p.R259H . . . PLEKHM3 389072 broad.mit.edu 36 2 208549971 208549971 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080475 exon3 c.G1195A p.E399K . . . APOB 338 broad.mit.edu 36 2 21084185 21084185 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.G9060A p.R3020R . . . ATIC 471 broad.mit.edu 36 2 215898996 215898996 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004044 exon6 c.C421T p.R141X . . . FN1 2335 broad.mit.edu 36 2 215964674 215964674 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212476 exon25 c.A3905G p.Y1302C . . . CCDC108 255101 broad.mit.edu 36 2 219600630 219600630 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194302 exon13 c.T2197A p.F733I . . . PTPRN 5798 broad.mit.edu 36 2 219870374 219870374 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199764 exon14 c.C1643T p.T548M . . . TMEM198 130612 broad.mit.edu 36 2 220122740 220122740 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005209 exon5 c.G1003A p.A335T . . . OBSL1 23363 broad.mit.edu 36 2 220139823 220139823 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173431 exon5 c.C2107T p.Q703X . . . SLC4A3 6508 broad.mit.edu 36 2 220212601 220212601 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005070 exon20 c.G3177A p.A1059A . . . SERPINE2 5270 broad.mit.edu 36 2 224557727 224557727 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136530 exon5 c.G906A p.Q302Q . . . KIAA1486 57624 broad.mit.edu 36 2 226155510 226155510 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020864 exon4 c.C1133T p.A378V . . . TRIP12 9320 broad.mit.edu 36 2 230358815 230358815 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004238 exon33 c.C4771T p.R1591C . . . COPS7B 64708 broad.mit.edu 36 2 232380474 232380474 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022730 exon7 c.G670A p.A224T . . . DIS3L2 129563 broad.mit.edu 36 2 232903717 232903717 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152383 exon16 c.C1997T p.S666F . . . ALPI 248 broad.mit.edu 36 2 233030595 233030595 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001631 exon6 c.A725G p.Q242R . . . TRPM8 79054 broad.mit.edu 36 2 234523479 234523479 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024080 exon9 c.C1090T p.R364C . . . TRPM8 79054 broad.mit.edu 36 2 234534330 234534330 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024080 exon12 c.G1534A p.A512T . . . COL6A3 1293 broad.mit.edu 36 2 237918440 237918440 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057166 exon31 c.C5341T p.P1781S . . . RAMP1 10267 broad.mit.edu 36 2 238450673 238450673 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005855 exon2 c.C121A p.L41I . . . NDUFA10 4705 broad.mit.edu 36 2 240609460 240609460 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004544 exon3 c.G287T p.S96I . . . MFSD2B 388931 broad.mit.edu 36 2 24099241 24099241 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080473 exon10 c.C1024T p.R342C . . . SNED1 25992 broad.mit.edu 36 2 241621926 241621926 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080437 exon3 c.C603T p.S201S . . . HDLBP 3069 broad.mit.edu 36 2 241818911 241818911 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005336 exon25 c.G3410A p.R1137H . . . HDLBP 3069 broad.mit.edu 36 2 241821947 241821947 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005336 exon24 c.C3249T p.D1083D . . . THAP4 51078 broad.mit.edu 36 2 242222039 242222039 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015963 exon2 c.T206A p.L69Q . . . ING5 84289 broad.mit.edu 36 2 242300104 242300104 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032329 exon5 c.C427T p.R143X . . . NCOA1 8648 broad.mit.edu 36 2 24806131 24806131 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003743 exon15 c.G3144A p.P1048P . . . NCOA1 8648 broad.mit.edu 36 2 24818411 24818411 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003743 exon17 c.G3558A p.P1186P . . . KIF3C 3797 broad.mit.edu 36 2 26057469 26057469 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002254 exon1 c.C822T p.G274G . . . OTOF 9381 broad.mit.edu 36 2 26549542 26549542 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194323 exon12 c.G1454A p.R485Q . . . MAPRE3 22924 broad.mit.edu 36 2 27102661 27102661 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012326 exon7 c.G787A p.A263T . . . TMEM214 54867 broad.mit.edu 36 2 27116771 27116771 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083590 exon15 c.C1711T p.L571L . . . IFT172 26160 broad.mit.edu 36 2 27539476 27539476 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015662 exon19 c.C2014T p.R672W . . . PLB1 151056 broad.mit.edu 36 2 28618134 28618134 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170585 exon13 c.C864T p.T288T . . . FAM179A 165186 broad.mit.edu 36 2 29079928 29079928 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199280 exon6 c.G706A p.V236M . . . ALK 238 broad.mit.edu 36 2 29460183 29460183 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004304 exon5 c.C1201T p.R401X ALK,ovary,NS,Substitution - Nonsense,0 . . EHD3 30845 broad.mit.edu 36 2 31342676 31342676 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014600 exon6 c.C1210T p.R404W . . . LTBP1 4052 broad.mit.edu 36 2 33475804 33475804 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000627 exon29 c.C3957T p.C1319C . . . RASGRP3 25780 broad.mit.edu 36 2 33617681 33617681 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170672 exon13 c.C1178T p.T393M . . . QPCT 25797 broad.mit.edu 36 2 37453467 37453467 + Missense_Mutation SNP A G G rs4670696 byCluster;byFrequency;byHapMap TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012413 exon7 c.A1079G p.H360R . . . DHX57 90957 broad.mit.edu 36 2 38942933 38942933 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198963 exon4 c.A430G p.N144D . . . HAAO 23498 broad.mit.edu 36 2 42864010 42864010 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012205 exon4 c.G298A p.V100M . . . PLEKHH2 130271 broad.mit.edu 36 2 43842983 43842983 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172069 exon28 c.T4108C p.W1370R . . . LRPPRC 10128 broad.mit.edu 36 2 43986420 43986420 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133259 exon31 c.G3279A p.A1093A . . . SLC3A1 6519 broad.mit.edu 36 2 44356489 44356489 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000341 exon1 c.C311T p.T104I . . . NRXN1 9378 broad.mit.edu 36 2 51108625 51108625 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135659 exon2 c.C291T p.C97C . . . TSPYL6 388951 broad.mit.edu 36 2 54335789 54335789 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003937 exon1 c.G1004A p.G335E . . . SPTBN1 6711 broad.mit.edu 36 2 54703108 54703108 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003128 exon9 c.C1044T p.R348R . . . MTIF2 4528 broad.mit.edu 36 2 55333221 55333221 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005369 exon9 c.C737T p.A246V . . . PAPOLG 64895 broad.mit.edu 36 2 60852227 60852227 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022894 exon7 c.C562T p.R188C . . . USP34 9736 broad.mit.edu 36 2 61398368 61398368 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014709 exon23 c.C3207T p.G1069G . . . SLC1A4 6509 broad.mit.edu 36 2 65097175 65097175 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003038 exon5 c.G898A p.A300T . . . SPRED2 200734 broad.mit.edu 36 2 65394501 65394501 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181784 exon6 c.C895T p.R299W . . . PNO1 56902 broad.mit.edu 36 2 68239163 68239163 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020143 exon2 c.A355G p.R119G . . . PROKR1 10887 broad.mit.edu 36 2 68736078 68736078 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138964 exon2 c.G1048A p.V350I . . . ARHGAP25 9938 broad.mit.edu 36 2 68855988 68855988 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166276 exon1 c.C172T p.Q58X . . . ARHGAP25 9938 broad.mit.edu 36 2 68906765 68906765 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166276 exon10 c.A1855G p.K619E . . . C2orf78 388960 broad.mit.edu 36 2 73897127 73897127 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080474 exon3 c.A2269G p.T757A . . . PCGF1 84759 broad.mit.edu 36 2 74586689 74586689 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032673 exon5 c.C428A p.P143Q . . . REG1A 5967 broad.mit.edu 36 2 79203565 79203565 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002909 exon5 c.G412A p.V138M . . . KIDINS220 57498 broad.mit.edu 36 2 8843377 8843377 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020738 exon17 c.G2174A p.R725H . . . KIAA1310 55683 broad.mit.edu 36 2 96631724 96631724 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001115016 exon19 c.A2338G p.I780V . . . FER1L5 90342 broad.mit.edu 36 2 96729460 96729460 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113382 exon43 c.C4927T p.R1643W . . . ZAP70 7535 broad.mit.edu 36 2 97720709 97720709 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207519 exon4 c.C619T p.R207C . . . VWA3B 200403 broad.mit.edu 36 2 98145839 98145839 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144992 exon8 c.C1082A p.P361H . . . INPP4A 3631 broad.mit.edu 36 2 98537189 98537189 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134225 exon15 c.C1371T p.C457C . . . LYG1 129530 broad.mit.edu 36 2 99274310 99274310 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174898 exon5 c.G155A p.R52H . . . CCDC141 285025 broad.mit.edu 36 2 179429234 179429234 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173648 exon18 c.2860delA p.M954fs . . . FSIP2 401024 broad.mit.edu 36 2 186381856 186381856 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173651 exon17 c.19845delA p.G6615fs . . . TOMM70A 9868 broad.mit.edu 36 3 101587800 101587800 + Missense_Mutation SNP G A A rs9833995 byHapMap TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014820 exon3 c.C577T p.R193C . . . LNP1 348801 broad.mit.edu 36 3 101657431 101657431 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085451 exon4 c.G508T p.A170S . . . ABI3BP 25890 broad.mit.edu 36 3 102049138 102049138 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015429 exon17 c.C1520T p.P507L . . . IRAK2 3656 broad.mit.edu 36 3 10226350 10226350 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001570 exon4 c.G502A p.D168N . . . CCDC80 151887 broad.mit.edu 36 3 113807191 113807191 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199511 exon8 c.C2616T p.D872D . . . CCDC80 151887 broad.mit.edu 36 3 113808752 113808752 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199511 exon7 c.G2467T p.E823X . . . CCDC80 151887 broad.mit.edu 36 3 113840829 113840829 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199511 exon2 c.G614A p.S205N . . . KIAA1407 57577 broad.mit.edu 36 3 115179866 115179866 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020817 exon16 c.C2463T p.Y821Y . . . VGLL4 9686 broad.mit.edu 36 3 11719445 11719445 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014667 exon2 c.C64T p.R22C . . . PLA1A 51365 broad.mit.edu 36 3 120819630 120819630 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015900 exon7 c.C829T p.L277L . . . TIMP4 7079 broad.mit.edu 36 3 12170178 12170178 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003256 exon5 c.C512T p.S171L . . . KPNA1 3836 broad.mit.edu 36 3 123651144 123651144 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002264 exon9 c.C884T p.A295V . . . MYLK 4638 broad.mit.edu 36 3 124935665 124935665 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053025 exon10 c.G868A p.A290T . . . MUC13 56667 broad.mit.edu 36 3 126112001 126112001 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033049 exon10 c.G1285A p.A429T . . . ALDH1L1 10840 broad.mit.edu 36 3 127307304 127307304 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012190 exon22 c.G2608A p.A870T . . . ZXDC 79364 broad.mit.edu 36 3 127643319 127643319 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025112 exon8 c.C2373T p.G791G . . . PLXNA1 5361 broad.mit.edu 36 3 128218994 128218994 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032242 exon17 c.C3313T p.R1105C . . . CAND2 23066 broad.mit.edu 36 3 12833669 12833669 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001162499 exon10 c.G2238A p.S746S . . . GATA2 2624 broad.mit.edu 36 3 129682808 129682808 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032638 exon6 c.G1187A p.R396Q . . . RHO 6010 broad.mit.edu 36 3 130733832 130733832 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000539 exon3 c.G579A p.T193T . . . RHO 6010 broad.mit.edu 36 3 130735173 130735173 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000539 exon5 c.C969T p.C323C . . . TMCC1 23023 broad.mit.edu 36 3 130856525 130856525 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017395 exon5 c.C1623A p.S541S . . . COL6A5 256076 broad.mit.edu 36 3 131642210 131642210 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153264 exon35 c.T6338C p.V2113A . . . COL6A6 131873 broad.mit.edu 36 3 131768663 131768663 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102608 exon4 c.C1710T p.I570I . . . NEK11 79858 broad.mit.edu 36 3 132353970 132353970 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024800 exon8 c.C696T p.F232F . . . NUP210 23225 broad.mit.edu 36 3 13354370 13354370 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024923 exon26 c.C3519T p.R1173R . . . NUP210 23225 broad.mit.edu 36 3 13413917 13413917 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024923 exon3 c.C376T p.R126C . . . EPHB1 2047 broad.mit.edu 36 3 136450941 136450941 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004441 exon15 c.G2764A p.A922T . . . CEP70 80321 broad.mit.edu 36 3 139738819 139738819 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024491 exon7 c.C526T p.Q176X . . . XPC 7508 broad.mit.edu 36 3 14165421 14165421 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145769 exon12 c.G2036A p.R679Q . . . PAQR9 344838 broad.mit.edu 36 3 144164069 144164069 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198504 exon1 c.G800A p.R267H . . . SLC9A9 285195 broad.mit.edu 36 3 144668716 144668716 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173653 exon12 c.G1322A p.R441Q . . . GRIP2 80852 broad.mit.edu 36 3 14526453 14526453 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080423 exon18 c.G2247A p.P749P . . . ZIC4 84107 broad.mit.edu 36 3 148591543 148591543 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168378 exon4 c.G1019A p.R340H . . . MRPS25 64432 broad.mit.edu 36 3 15081698 15081698 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022497 exon1 c.T8C p.M3T . . . IGSF10 285313 broad.mit.edu 36 3 152638072 152638072 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178145 exon2 c.G1048A p.V350M . . . ARHGEF26 26084 broad.mit.edu 36 3 155323195 155323195 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015595 exon2 c.G724A p.A242T . . . PLCH1 23007 broad.mit.edu 36 3 156688585 156688585 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130960 exon20 c.C2509T p.R837W . . . RARRES1 5918 broad.mit.edu 36 3 159911392 159911392 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002888 exon3 c.C364T p.R122C . . . GALNTL2 117248 broad.mit.edu 36 3 16225168 16225168 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054110 exon4 c.A1066G p.I356V . . . PLCL2 23228 broad.mit.edu 36 3 17027005 17027005 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144382 exon3 c.A1144G p.M382V . . . SLC2A2 6514 broad.mit.edu 36 3 172205830 172205830 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000340 exon7 c.C901T p.R301X . . . MCF2L2 23101 broad.mit.edu 36 3 184393556 184393556 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015078 exon27 c.G2941A p.G981R . . . YEATS2 55689 broad.mit.edu 36 3 184957077 184957077 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018023 exon12 c.G1458A p.V486V . . . YEATS2 55689 broad.mit.edu 36 3 184962586 184962586 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018023 exon15 c.T1772C p.I591T . . . ABCC5 10057 broad.mit.edu 36 3 185162002 185162002 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005688 exon16 c.G2370A p.P790P . . . HTR3C 170572 broad.mit.edu 36 3 185253604 185253604 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130770 exon1 c.C42T p.C14C . . . HTR3E 285242 broad.mit.edu 36 3 185306776 185306776 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182589 exon7 c.G1137A p.A379A . . . AP2M1 1173 broad.mit.edu 36 3 185380666 185380666 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025205 exon4 c.G356A p.G119D . . . ECE2 9718 broad.mit.edu 36 3 185492659 185492659 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014693 exon19 c.G2591T p.R864L . . . LPP 4026 broad.mit.edu 36 3 189725194 189725194 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167671 exon5 c.C354T p.D118D . . . TP63 8626 broad.mit.edu 36 3 190939235 190939235 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114979 exon3 c.C302T p.S101L . . . TMEM207 131920 broad.mit.edu 36 3 191641948 191641948 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207316 exon3 c.A131G p.D44G . . . KIAA0226 9711 broad.mit.edu 36 3 198905045 198905045 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014687 exon11 c.G1724A p.R575H . . . UBE2E2 7325 broad.mit.edu 36 3 23606287 23606287 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152653 exon6 c.C567T p.D189D . . . TOP2B 7155 broad.mit.edu 36 3 25643731 25643731 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001068 exon16 c.G1952A p.R651H . . . TGFBR2 7048 broad.mit.edu 36 3 30690682 30690682 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003242 exon5 c.G1336A p.D446N . . . STT3B 201595 broad.mit.edu 36 3 31596416 31596416 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178862 exon3 c.G535A p.G179S . . . CNOT10 25904 broad.mit.edu 36 3 32790004 32790004 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015442 exon19 c.C2132G p.A711G . . . TMPPE 643853 broad.mit.edu 36 3 33109761 33109761 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136238 exon2 c.C520T p.R174W . . . DCLK3 85443 broad.mit.edu 36 3 36754293 36754293 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033403 exon2 c.C862T p.R288C . . . ITGA9 3680 broad.mit.edu 36 3 37820359 37820359 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002207 exon27 c.C2931T p.Y977Y . . . VILL 50853 broad.mit.edu 36 3 38018994 38018994 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015873 exon13 c.C1583T p.A528V . . . DLEC1 9940 broad.mit.edu 36 3 38102742 38102742 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007337 exon9 c.C1442T p.P481L . . . SCN10A 6336 broad.mit.edu 36 3 38718439 38718439 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006514 exon26 c.G4552A p.V1518I . . . SCN10A 6336 broad.mit.edu 36 3 38756055 38756055 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006514 exon14 c.C2235T p.G745G . . . SCN11A 11280 broad.mit.edu 36 3 38863503 38863503 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014139 exon26 c.G5062A p.A1688T . . . XIRP1 165904 broad.mit.edu 36 3 39202499 39202499 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194293 exon2 c.G3442A p.V1148M . . . XIRP1 165904 broad.mit.edu 36 3 39204233 39204233 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194293 exon2 c.C1708T p.R570X . . . ENTPD3 956 broad.mit.edu 36 3 40443998 40443998 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001248 exon11 c.G1585A p.D529N . . . ZNF619 285267 broad.mit.edu 36 3 40503750 40503750 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145083 exon4 c.C613T p.R205W . . . ZNF621 285268 broad.mit.edu 36 3 40549511 40549511 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098414 exon5 c.C1246T p.R416C . . . ULK4 54986 broad.mit.edu 36 3 41948485 41948485 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017886 exon5 c.T396C p.P132P . . . TRAK1 22906 broad.mit.edu 36 3 42204601 42204601 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042646 exon5 c.G541A p.A181T . . . SEC22C 9117 broad.mit.edu 36 3 42585413 42585413 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004206 exon2 c.C130T p.L44L . . . KBTBD5 131377 broad.mit.edu 36 3 42707456 42707456 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152393 exon5 c.C1709T p.T570M . . . CCR9 10803 broad.mit.edu 36 3 45917970 45917970 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006641 exon2 c.T650C p.V217A . . . ALS2CL 259173 broad.mit.edu 36 3 46692825 46692825 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190707 exon19 c.C2100T p.Y700Y . . . ALS2CL 259173 broad.mit.edu 36 3 46702071 46702071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190707 exon7 c.C734T p.P245L . . . NBEAL2 23218 broad.mit.edu 36 3 47017544 47017544 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015175 exon28 c.C4355T p.S1452L . . . KLHL18 23276 broad.mit.edu 36 3 47336209 47336209 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025010 exon2 c.T192C p.H64H . . . PTPN23 25930 broad.mit.edu 36 3 47425488 47425488 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015466 exon16 c.C1549T p.R517C . . . SMARCC1 6599 broad.mit.edu 36 3 47702564 47702564 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003074 exon14 c.C1364T p.A455V . . . NME6 10201 broad.mit.edu 36 3 48311672 48311672 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005793 exon5 c.G315A p.T105T . . . PLXNB1 5364 broad.mit.edu 36 3 48440627 48440627 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002673 exon3 c.G398A p.R133Q . . . CELSR3 1951 broad.mit.edu 36 3 48672089 48672089 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001407 exon1 c.C2983T p.R995W . . . USP19 10869 broad.mit.edu 36 3 49123416 49123416 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199162 exon23 c.G3480A p.R1160R . . . USP19 10869 broad.mit.edu 36 3 49127451 49127451 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199162 exon14 c.G2090A p.R697H . . . USP4 7375 broad.mit.edu 36 3 49324079 49324079 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003363 exon7 c.G708A p.A236A . . . RHOA 387 broad.mit.edu 36 3 49388013 49388013 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001664 exon2 c.G14A p.R5Q . . . TCTA 6988 broad.mit.edu 36 3 49427268 49427268 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022171 exon3 c.C281T p.A94V . . . AMT 275 broad.mit.edu 36 3 49430010 49430010 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000481 exon9 c.C1179A p.P393P . . . DAG1 1605 broad.mit.edu 36 3 49543500 49543500 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004393 exon3 c.G552A p.A184A . . . BSN 8927 broad.mit.edu 36 3 49665027 49665027 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003458 exon5 c.C3034T p.R1012C . . . RNF123 63891 broad.mit.edu 36 3 49713950 49713950 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022064 exon16 c.G1300A p.V434I . . . TRAIP 10293 broad.mit.edu 36 3 49844408 49844408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005879 exon11 c.C982T p.R328W . . . HYAL1 3373 broad.mit.edu 36 3 50313050 50313050 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153281 exon6 c.G1176A p.T392T . . . RRP9 9136 broad.mit.edu 36 3 51945393 51945393 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004704 exon8 c.C655T p.R219C . . . DNAH1 25981 broad.mit.edu 36 3 52358137 52358137 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015512 exon13 c.A2300G p.K767R . . . SEMA3G 56920 broad.mit.edu 36 3 52449027 52449027 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020163 exon11 c.G1271A p.R424H . . . SEMA3G 56920 broad.mit.edu 36 3 52449124 52449124 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020163 exon11 c.C1174T p.R392W . . . SEMA3G 56920 broad.mit.edu 36 3 52450331 52450331 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020163 exon7 c.C802T p.R268C . . . STAB1 23166 broad.mit.edu 36 3 52523496 52523496 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015136 exon34 c.C3622T p.R1208C . . . PRKCD 5580 broad.mit.edu 36 3 53198148 53198148 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006254 exon17 c.A1589G p.D530G . . . TKT 7086 broad.mit.edu 36 3 53251273 53251273 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135055 exon2 c.G133A p.A45T . . . CACNA1D 776 broad.mit.edu 36 3 53675513 53675513 + De_novo_Start_OutOfFrame SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128839 exon7 c.G1027T p.G343C . . . FLNB 2317 broad.mit.edu 36 3 58110937 58110937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164317 exon39 c.C6403T p.R2135W . . . CADPS 8618 broad.mit.edu 36 3 62545933 62545933 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183393 exon8 c.G1544A p.R515Q . . . MAGI1 9223 broad.mit.edu 36 3 65391533 65391533 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015520 exon11 c.G1427A p.R476Q . . . SLC25A26 115286 broad.mit.edu 36 3 66503648 66503648 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173471 exon8 c.C450T p.G150G . . . LRIG1 26018 broad.mit.edu 36 3 66517296 66517296 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015541 exon14 c.A1880G p.N627S . . . KBTBD8 84541 broad.mit.edu 36 3 67136405 67136405 + Silent SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032505 exon3 c.C324A p.A108A . . . FAM19A1 407738 broad.mit.edu 36 3 68549141 68549141 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213609 exon3 c.T140G p.I47R . . . CNTN3 5067 broad.mit.edu 36 3 74501045 74501045 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020872 exon7 c.C931T p.R311C . . . CNTN3 5067 broad.mit.edu 36 3 74556729 74556729 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020872 exon4 c.C411T p.G137G . . . OXTR 5021 broad.mit.edu 36 3 8784219 8784219 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000916 exon3 c.T655G p.C219G . . . TTLL3 26140 broad.mit.edu 36 3 9845828 9845828 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025930 exon10 c.G1732A p.A578T . . . EPHA6 285220 broad.mit.edu 36 3 98667989 98667989 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173655 exon5 c.A43G p.N15D . . . WDR17 116966 broad.mit.edu 36 4 177308285 177308286 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170710 exon16 c.2217_2218insA p.V739fs . . . ADH1C 126 broad.mit.edu 36 4 100483169 100483169 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000669 exon6 c.T634A p.C212S . . . GSTCD 79807 broad.mit.edu 36 4 106859871 106859871 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024751 exon3 c.C371T p.P124L . . . SGMS2 166929 broad.mit.edu 36 4 109043868 109043868 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136257 exon4 c.C604T p.R202W . . . CYP2U1 113612 broad.mit.edu 36 4 109086200 109086200 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183075 exon2 c.C1116T p.P372P . . . ALPK1 80216 broad.mit.edu 36 4 113568232 113568232 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025144 exon9 c.G757A p.D253N . . . ANK2 287 broad.mit.edu 36 4 114433107 114433107 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020977 exon21 c.C2364T p.N788N . . . ARSJ 79642 broad.mit.edu 36 4 115043361 115043361 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024590 exon2 c.A1318G p.I440V . . . IL2 3558 broad.mit.edu 36 4 123597027 123597027 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000586 exon1 c.C19A p.L7M . . . FAT4 79633 broad.mit.edu 36 4 126549364 126549364 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon4 c.C5885T p.T1962I . . . FAT4 79633 broad.mit.edu 36 4 126589396 126589396 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024582 exon9 c.C7775A p.S2592Y . . . FAT4 79633 broad.mit.edu 36 4 126591820 126591820 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon9 c.A10199G p.D3400G . . . SCLT1 132320 broad.mit.edu 36 4 130184063 130184063 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144643 exon4 c.T171C p.A57A . . . PCDH10 57575 broad.mit.edu 36 4 134294959 134294959 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032961 exon2 c.C2679T p.R893R . . . PCDH18 54510 broad.mit.edu 36 4 138662255 138662255 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon4 c.A2786T p.D929V . . . NAA15 80155 broad.mit.edu 36 4 140502470 140502470 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057175 exon14 c.C1682A p.A561D . . . MAML3 55534 broad.mit.edu 36 4 140860113 140860113 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018717 exon6 c.A3219G p.P1073P . . . ZNF827 152485 broad.mit.edu 36 4 147043488 147043488 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178835 exon2 c.C373T p.R125W . . . CC2D2A 57545 broad.mit.edu 36 4 15113601 15113601 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080522 exon7 c.G395A p.R132Q . . . FBXW7 55294 broad.mit.edu 36 4 153468834 153468834 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018315 exon8 c.G1154A p.R385H FBXW7,large_intestine,NS,Substitution - Missense,0 . . MND1 84057 broad.mit.edu 36 4 154537827 154537827 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032117 exon6 c.C358T p.R120X . . . DCHS2 54798 broad.mit.edu 36 4 155375975 155375975 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon25 c.C7914T p.G2638G . . . DCHS2 54798 broad.mit.edu 36 4 155400237 155400237 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon20 c.G5334T p.Q1778H . . . DCHS2 54798 broad.mit.edu 36 4 155470206 155470206 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142552 exon6 c.G3837A p.A1279A . . . GUCY1A3 2982 broad.mit.edu 36 4 156862691 156862691 + Nonsense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon9 c.A1768T p.K590X . . . NPY5R 4889 broad.mit.edu 36 4 164492022 164492022 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006174 exon4 c.C1147T p.P383S . . . KIAA1712 80817 broad.mit.edu 36 4 175462058 175462058 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040157 exon6 c.G470T p.G157V . . . FGFR3 2261 broad.mit.edu 36 4 1777851 1777851 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163213 exon15 c.G2035A p.V679I . . . AGA 175 broad.mit.edu 36 4 178592636 178592636 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000027 exon7 c.C700T p.R234C . . . ODZ3 55714 broad.mit.edu 36 4 183951052 183951052 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080477 exon25 c.C6233T p.T2078M . . . FAT1 2195 broad.mit.edu 36 4 187761356 187761356 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon19 c.G11318A p.R3773H . . . FAT1 2195 broad.mit.edu 36 4 187867297 187867297 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon2 c.C679T p.R227C . . . WHSC1 7468 broad.mit.edu 36 4 1932574 1932574 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133331 exon19 c.C3270T p.N1090N . . . SLIT2 9353 broad.mit.edu 36 4 20134611 20134611 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004787 exon13 c.G1261A p.A421T . . . SLIT2 9353 broad.mit.edu 36 4 20144298 20144298 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004787 exon18 c.T1694G p.F565C . . . PPARGC1A 10891 broad.mit.edu 36 4 23442320 23442320 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013261 exon3 c.T387C p.P129P . . . HTT 3064 broad.mit.edu 36 4 3210035 3210035 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002111 exon65 c.C8955T p.D2985D . . . RGS12 6002 broad.mit.edu 36 4 3288384 3288384 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002926 exon2 c.T689C p.M230T . . . COX7B2 170712 broad.mit.edu 36 4 46431762 46431762 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130902 exon3 c.C205A p.P69T . . . TXK 7294 broad.mit.edu 36 4 47764424 47764424 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003328 exon15 c.C1571T p.A524V . . . FRYL 285527 broad.mit.edu 36 4 48237300 48237300 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015030 exon46 c.G6122A p.R2041Q . . . PDGFRA 5156 broad.mit.edu 36 4 54849982 54849982 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon21 c.T2824C p.S942P . . . SRD5A3 79644 broad.mit.edu 36 4 55925004 55925004 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024592 exon3 c.A371G p.E124G . . . CLOCK 9575 broad.mit.edu 36 4 56039820 56039820 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004898 exon6 c.T175C p.S59P . . . KIAA1211 57482 broad.mit.edu 36 4 56875799 56875799 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020722 exon8 c.C1374T p.A458A . . . AASDH 132949 broad.mit.edu 36 4 56914400 56914400 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181806 exon9 c.G1503A p.L501L . . . CRMP1 1400 broad.mit.edu 36 4 5908807 5908807 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001313 exon4 c.G442A p.V148I . . . WFS1 7466 broad.mit.edu 36 4 6341650 6341650 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145853 exon4 c.G351A p.T117T . . . WFS1 7466 broad.mit.edu 36 4 6344567 6344567 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145853 exon6 c.C654T p.P218P . . . MAN2B2 23324 broad.mit.edu 36 4 6639724 6639724 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015274 exon4 c.G492A p.A164A . . . GNRHR 2798 broad.mit.edu 36 4 68292905 68292905 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000406 exon2 c.C718T p.R240W . . . YTHDC1 91746 broad.mit.edu 36 4 68885488 68885488 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031732 exon4 c.G735A p.E245E . . . UGT2A1 10941 broad.mit.edu 36 4 70547404 70547404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006798 exon1 c.G548A p.C183Y . . . RUFY3 22902 broad.mit.edu 36 4 71807179 71807179 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014961 exon1 c.G25A p.D9N . . . SEPT11 55752 broad.mit.edu 36 4 78160714 78160714 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018243 exon7 c.C820T p.R274X . . . CNOT6L 246175 broad.mit.edu 36 4 78871672 78871672 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144571 exon9 c.C917T p.A306V . . . FRAS1 80144 broad.mit.edu 36 4 79680945 79680945 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon74 c.G11682A p.A3894A . . . BMP2K 55589 broad.mit.edu 36 4 80051613 80051613 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198892 exon16 c.C2888T p.T963M . . . ARHGAP24 83478 broad.mit.edu 36 4 86862108 86862108 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025616 exon3 c.A227T p.N76I . . . PKD2 5311 broad.mit.edu 36 4 89205595 89205595 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000297 exon11 c.G2164A p.V722M . . . PKD2 5311 broad.mit.edu 36 4 89208176 89208176 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000297 exon13 c.G2461A p.G821R . . . GRID2 2895 broad.mit.edu 36 4 94909581 94909581 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001510 exon15 c.C2558T p.T853M . . . PJA2 9867 broad.mit.edu 36 5 108719515 108719515 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014819 exon7 c.G1764T p.E588D . . . MAN2A1 4124 broad.mit.edu 36 5 109134045 109134045 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002372 exon7 c.G1100A p.C367Y . . . CTNND2 1501 broad.mit.edu 36 5 11135866 11135866 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001332 exon16 c.C2730T p.C910C . . . APC 324 broad.mit.edu 36 5 112201816 112201816 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.C2572T p.R858X APC,large_intestine,NS,Substitution - Nonsense,0 . . APC 324 broad.mit.edu 36 5 112203538 112203538 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.C4294T p.R1432X APC,large_intestine,rectum,Substitution - Nonsense,0 . . MCC 4163 broad.mit.edu 36 5 112412819 112412819 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085377 exon16 c.C2525T p.T842M . . . YTHDC2 64848 broad.mit.edu 36 5 112888677 112888677 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022828 exon3 c.G379A p.V127I . . . AQPEP 206338 broad.mit.edu 36 5 115378045 115378045 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173800 exon16 c.C2372T p.A791V . . . PRR16 51334 broad.mit.edu 36 5 120050237 120050237 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016644 exon3 c.G780A p.V260V . . . MEGF10 84466 broad.mit.edu 36 5 126798996 126798996 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032446 exon17 c.A2020G p.T674A . . . ACSL6 23305 broad.mit.edu 36 5 131338405 131338405 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015256 exon11 c.C1013T p.A338V . . . TERT 7015 broad.mit.edu 36 5 1331780 1331780 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198253 exon6 c.C2262T p.H754H . . . CDKL3 51265 broad.mit.edu 36 5 133670267 133670267 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113575 exon10 c.C1390T p.R464C . . . HSPA9 3313 broad.mit.edu 36 5 137930618 137930618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004134 exon8 c.C850T p.R284W . . . CTNNA1 1495 broad.mit.edu 36 5 138294482 138294482 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001903 exon16 c.G2257T p.G753X . . . CXXC5 51523 broad.mit.edu 36 5 139040526 139040526 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016463 exon2 c.G234A p.P78P . . . NRG2 9542 broad.mit.edu 36 5 139247244 139247244 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013981 exon2 c.C737T p.T246M . . . SLC35A4 113829 broad.mit.edu 36 5 139927133 139927133 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080670 exon3 c.C195T p.C65C . . . PCDHA8 56140 broad.mit.edu 36 5 140202850 140202850 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031856 exon1 c.C1760T p.A587V . . . PCDHB7 56129 broad.mit.edu 36 5 140533761 140533761 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018940 exon1 c.C1161T p.D387D . . . PCDHB16 57717 broad.mit.edu 36 5 140542835 140542835 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020957 exon1 c.A517G p.S173G . . . PCDHB9 56127 broad.mit.edu 36 5 140548491 140548491 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019119 exon1 c.T1415C p.V472A . . . PCDHGA2 56113 broad.mit.edu 36 5 140700688 140700688 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032009 exon1 c.G1966A p.A656T . . . FCHSD1 89848 broad.mit.edu 36 5 141001311 141001311 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033449 exon20 c.C2011T p.R671C . . . ARAP3 64411 broad.mit.edu 36 5 141021469 141021469 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022481 exon21 c.C3085T p.R1029C . . . JAKMIP2 9832 broad.mit.edu 36 5 147021046 147021046 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014790 exon3 c.G285A p.Q95Q . . . SH3TC2 79628 broad.mit.edu 36 5 148364539 148364539 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024577 exon17 c.G3795A p.L1265L . . . FAT2 2196 broad.mit.edu 36 5 150903172 150903172 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon9 c.C7709T p.T2570M . . . NMUR2 56923 broad.mit.edu 36 5 151752030 151752030 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020167 exon4 c.T1163C p.M388T . . . ITK 3702 broad.mit.edu 36 5 156603303 156603303 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005546 exon12 c.A1153G p.K385E . . . FAM134B 54463 broad.mit.edu 36 5 16625168 16625168 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034850 exon2 c.G364A p.V122I . . . SH3PXD2B 285590 broad.mit.edu 36 5 171705804 171705804 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017995 exon12 c.G1129A p.A377T . . . HK3 3101 broad.mit.edu 36 5 176248084 176248084 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002115 exon10 c.G1159A p.V387I . . . SLC34A1 6569 broad.mit.edu 36 5 176746152 176746152 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167579 exon5 c.G511A p.V171I . . . B4GALT7 11285 broad.mit.edu 36 5 176968190 176968190 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007255 exon4 c.C684T p.D228D . . . BTNL8 79908 broad.mit.edu 36 5 180270976 180270976 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159707 exon2 c.G81A p.T27T . . . TRIM41 90933 broad.mit.edu 36 5 180594089 180594089 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033549 exon6 c.G1601A p.R534H . . . CDH12 1010 broad.mit.edu 36 5 21838086 21838086 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004061 exon10 c.C1203A p.T401T . . . PRDM9 56979 broad.mit.edu 36 5 23562326 23562326 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020227 exon11 c.G1372T p.E458X . . . CDH10 1008 broad.mit.edu 36 5 24534363 24534363 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006727 exon9 c.C1416T p.R472R . . . SDHA 6389 broad.mit.edu 36 5 277547 277547 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004168 exon3 c.C223T p.R75X . . . DROSHA 29102 broad.mit.edu 36 5 31546969 31546969 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon8 c.C1362T p.S454S . . . DROSHA 29102 broad.mit.edu 36 5 31562574 31562574 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon4 c.C223T p.R75X . . . PDZD2 23037 broad.mit.edu 36 5 32109841 32109841 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178140 exon17 c.C2872T p.R958C . . . PDZD2 23037 broad.mit.edu 36 5 32126515 32126515 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178140 exon19 c.G7204A p.E2402K . . . NPR3 4883 broad.mit.edu 36 5 32774758 32774758 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000908 exon3 c.C924T p.H308H . . . SLC1A3 6507 broad.mit.edu 36 5 36716303 36716303 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166695 exon7 c.G1144A p.V382M . . . NIPBL 25836 broad.mit.edu 36 5 37036715 37036715 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015384 exon13 c.G3542T p.R1181M . . . RICTOR 253260 broad.mit.edu 36 5 39011450 39011450 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152756 exon10 c.G835T p.A279S . . . SLC9A3 6550 broad.mit.edu 36 5 529160 529160 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004174 exon14 c.G2115A p.A705A . . . KIAA0947 23379 broad.mit.edu 36 5 5513617 5513617 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015325 exon13 c.G1170T p.E390D . . . MAP3K1 4214 broad.mit.edu 36 5 56206634 56206634 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005921 exon10 c.G1705A p.V569I . . . MAP3K1 4214 broad.mit.edu 36 5 56216408 56216408 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005921 exon16 c.C3980T p.A1327V . . . KIF2A 3796 broad.mit.edu 36 5 61681657 61681657 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098511 exon4 c.G287A p.R96Q . . . PAPD7 11044 broad.mit.edu 36 5 6799494 6799494 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171805 exon7 c.C663T p.S221S . . . FOXD1 2297 broad.mit.edu 36 5 72779809 72779809 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004472 exon1 c.G135A p.R45R . . . AP3B1 8546 broad.mit.edu 36 5 77366003 77366003 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003664 exon24 c.C2832T p.S944S . . . AP3B1 8546 broad.mit.edu 36 5 77513087 77513087 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003664 exon8 c.G942A p.A314A . . . SCAMP1 9522 broad.mit.edu 36 5 77748155 77748155 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004866 exon4 c.G269A p.R90H . . . HOMER1 9456 broad.mit.edu 36 5 78788527 78788527 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004272 exon2 c.C76T p.P26S . . . CMYA5 202333 broad.mit.edu 36 5 79066362 79066362 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon2 c.G6018T p.E2006D . . . THBS4 7060 broad.mit.edu 36 5 79408502 79408502 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003248 exon16 c.C1961T p.T654I . . . FAM151B 167555 broad.mit.edu 36 5 79851326 79851326 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205548 exon4 c.C376T p.R126C . . . VCAN 1462 broad.mit.edu 36 5 82869120 82869120 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164097 exon7 c.A1581G p.T527T . . . GPR98 84059 broad.mit.edu 36 5 90011199 90011199 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon26 c.C5521T p.R1841C . . . GPR98 84059 broad.mit.edu 36 5 90095025 90095025 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon59 c.A12268G p.T4090A . . . SYNPO 11346 broad.mit.edu 36 5 150009263 150009263 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G - G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166208 exon3 c.1965delG p.Q655fs . . . PREP 5550 broad.mit.edu 36 6 105836379 105836379 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002726 exon14 c.C1773T p.I591I . . . BEND3 57673 broad.mit.edu 36 6 107497944 107497944 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080450 exon5 c.C1144T p.R382W . . . MAK 4117 broad.mit.edu 36 6 10910128 10910128 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005906 exon7 c.C814T p.R272X MAK,breast,NS,Substitution - Missense,+1 . . C6orf186 728464 broad.mit.edu 36 6 110750761 110750761 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001123364 exon2 c.G326A p.R109Q . . . CDK19 23097 broad.mit.edu 36 6 111095452 111095452 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015076 exon4 c.C334T p.R112C . . . TRAF3IP2 10758 broad.mit.edu 36 6 112019733 112019733 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147686 exon2 c.C250T p.R84C . . . C6orf204 387119 broad.mit.edu 36 6 118993954 118993954 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206921 exon3 c.C451T p.R151W . . . MAN1A1 4121 broad.mit.edu 36 6 119552697 119552697 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005907 exon10 c.C1377T p.I459I . . . PTPRK 5796 broad.mit.edu 36 6 128602938 128602938 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002844 exon5 c.C628T p.Q210X . . . TAAR9 134860 broad.mit.edu 36 6 132901229 132901229 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175057 exon1 c.C108T p.Y36Y . . . MYB 4602 broad.mit.edu 36 6 135558606 135558606 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161660 exon8 c.G871A p.G291R . . . PHACTR2 9749 broad.mit.edu 36 6 144123417 144123417 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100164 exon5 c.A641C p.Q214P . . . UTRN 7402 broad.mit.edu 36 6 145202073 145202073 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007124 exon71 c.G10137A p.S3379S . . . SASH1 23328 broad.mit.edu 36 6 148850475 148850475 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015278 exon8 c.G660A p.S220S . . . C6orf211 79624 broad.mit.edu 36 6 151821332 151821332 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024573 exon3 c.G324A p.W108X . . . TULP4 56995 broad.mit.edu 36 6 158655110 158655110 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007466 exon1 c.G74A p.R25H . . . IGF2R 3482 broad.mit.edu 36 6 160437478 160437478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000876 exon45 c.G6673A p.V2225M . . . SLC22A1 6580 broad.mit.edu 36 6 160471184 160471184 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003057 exon2 c.C470T p.A157V . . . MAP3K4 4216 broad.mit.edu 36 6 161390118 161390118 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006724 exon3 c.G824A p.R275Q . . . RNASET2 8635 broad.mit.edu 36 6 167272439 167272439 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003730 exon6 c.C380T p.A127V . . . SMOC2 64094 broad.mit.edu 36 6 168741584 168741584 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166412 exon8 c.C799T p.R267C . . . SMOC2 64094 broad.mit.edu 36 6 168795679 168795679 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166412 exon11 c.G1131A p.R377R . . . TRIM38 10475 broad.mit.edu 36 6 26074881 26074881 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006355 exon3 c.A152C p.Q51P . . . TRIM38 10475 broad.mit.edu 36 6 26091817 26091817 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006355 exon8 c.T1321C p.S441P . . . HIST1H1A 3024 broad.mit.edu 36 6 26125576 26125576 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005325 exon1 c.G364T p.G122C . . . HIST1H2BD 3017 broad.mit.edu 36 6 26266494 26266494 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021063 exon1 c.G118A p.V40M . . . HIST1H3G 8355 broad.mit.edu 36 6 26379277 26379277 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003534 exon1 c.T315C p.F105F . . . BTN3A2 11118 broad.mit.edu 36 6 26482554 26482554 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197249 exon8 c.G859A p.D287N . . . PGBD1 84547 broad.mit.edu 36 6 28376852 28376852 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184743 exon7 c.C1242T p.S414S . . . DUSP22 56940 broad.mit.edu 36 6 293125 293125 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020185 exon6 c.G286A p.V96M . . . TUBB2B 347733 broad.mit.edu 36 6 3170819 3170819 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178012 exon4 c.G503A p.S168N . . . C2 717 broad.mit.edu 36 6 32003910 32003910 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000063 exon2 c.G246A p.A82A . . . DAXX 1616 broad.mit.edu 36 6 33394537 33394537 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001141970 exon8 c.C2220T p.C740C . . . ZNF76 7629 broad.mit.edu 36 6 35366035 35366035 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003427 exon6 c.C447T p.S149S . . . ZNF76 7629 broad.mit.edu 36 6 35368358 35368358 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003427 exon10 c.C981T p.T327T . . . TEAD3 7005 broad.mit.edu 36 6 35552098 35552098 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003214 exon9 c.G685T p.E229X . . . LHFPL5 222662 broad.mit.edu 36 6 35881630 35881630 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182548 exon1 c.G205A p.V69M . . . SLC26A8 116369 broad.mit.edu 36 6 36030994 36030994 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052961 exon17 c.G2145A p.A715A . . . TBC1D22B 55633 broad.mit.edu 36 6 37392902 37392902 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017772 exon12 c.T1331C p.V444A . . . DNAH8 1769 broad.mit.edu 36 6 38993691 38993691 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon68 c.A9670T p.T3224S . . . DAAM2 23500 broad.mit.edu 36 6 39974690 39974690 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015345 exon22 c.T2678C p.V893A . . . FRS3 10817 broad.mit.edu 36 6 41846494 41846494 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006653 exon7 c.A1320C p.Q440H . . . CUL7 9820 broad.mit.edu 36 6 43126037 43126037 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014780 exon5 c.T1311C p.I437I . . . SRF 6722 broad.mit.edu 36 6 43251677 43251677 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003131 exon3 c.A1036G p.M346V . . . YIPF3 25844 broad.mit.edu 36 6 43591703 43591703 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015388 exon2 c.G190A p.A64T . . . XPO5 57510 broad.mit.edu 36 6 43609719 43609719 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020750 exon21 c.C2346T p.T782T . . . CDYL 9425 broad.mit.edu 36 6 4880880 4880880 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143970 exon3 c.G428A p.R143H . . . EXOC2 55770 broad.mit.edu 36 6 494246 494246 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018303 exon22 c.C2167T p.R723C . . . TFAP2B 7021 broad.mit.edu 36 6 50899427 50899427 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003221 exon2 c.G430C p.V144L . . . PKHD1 5314 broad.mit.edu 36 6 51983094 51983094 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon35 c.T5723C p.I1908T . . . PAQR8 85315 broad.mit.edu 36 6 52376137 52376137 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133367 exon2 c.G167A p.R56H . . . ICK 22858 broad.mit.edu 36 6 53013949 53013949 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016513 exon3 c.C45T p.Y15Y . . . HMGCLL1 54511 broad.mit.edu 36 6 55412231 55412231 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019036 exon9 c.A971G p.E324G . . . DST 667 broad.mit.edu 36 6 56588720 56588720 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001723 exon24 c.G7504A p.E2502K . . . LMBRD1 55788 broad.mit.edu 36 6 70480373 70480373 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018368 exon9 c.G800A p.R267H . . . RIMS1 22999 broad.mit.edu 36 6 72863551 72863551 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014989 exon3 c.C424T p.R142C . . . HTR1B 3351 broad.mit.edu 36 6 78229460 78229460 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000863 exon1 c.C380T p.S127L . . . IBTK 25998 broad.mit.edu 36 6 82937936 82937936 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015525 exon29 c.T3987C p.P1329P . . . DOPEY1 23033 broad.mit.edu 36 6 83926269 83926269 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015018 exon37 c.C6833T p.T2278M . . . MDN1 23195 broad.mit.edu 36 6 90428530 90428530 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon87 c.T14562C p.D4854D . . . CASP8AP2 9994 broad.mit.edu 36 6 90630252 90630252 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137667 exon7 c.A2103G p.Q701Q . . . GJA10 84694 broad.mit.edu 36 6 90661371 90661371 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032602 exon1 c.C463T p.R155C . . . GPR63 81491 broad.mit.edu 36 6 97353688 97353688 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143957 exon3 c.C641T p.A214V . . . AKAP12 9590 broad.mit.edu 36 6 151714693 151714693 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C - C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005100 exon4 c.3474delC p.I1158fs . . . ZAN 7455 broad.mit.edu 36 7 100196042 100196042 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173059 exon19 c.C3789T p.F1263F . . . NAPEPLD 222236 broad.mit.edu 36 7 102556211 102556211 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198990 exon2 c.G249A p.W83X . . . LRRN3 54674 broad.mit.edu 36 7 110551500 110551500 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018334 exon2 c.G1436C p.G479A . . . FEZF1 389549 broad.mit.edu 36 7 121731537 121731537 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024613 exon1 c.C191A p.S64Y . . . ZNF800 168850 broad.mit.edu 36 7 126801295 126801295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176814 exon5 c.C1331T p.P444L . . . TNPO3 23534 broad.mit.edu 36 7 128409595 128409595 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012470 exon14 c.G1802A p.S601N . . . SMO 6608 broad.mit.edu 36 7 128639324 128639324 + Silent SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005631 exon12 c.A2160C p.G720G . . . FAM40B 57464 broad.mit.edu 36 7 128909955 128909955 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020704 exon20 c.C2086T p.R696W . . . KLF14 136259 broad.mit.edu 36 7 130068657 130068657 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138693 exon1 c.G744A p.T248T . . . LRGUK 136332 broad.mit.edu 36 7 133462776 133462776 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144648 exon1 c.A116G p.Q39R . . . SLC13A4 26266 broad.mit.edu 36 7 135016882 135016882 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012450 exon16 c.C1850T p.A617V . . . PTN 5764 broad.mit.edu 36 7 136588840 136588840 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002825 exon3 c.G200A p.R67Q . . . KIAA1549 57670 broad.mit.edu 36 7 138203276 138203276 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164665 exon15 c.C4914A p.A1638A . . . KIAA1549 57670 broad.mit.edu 36 7 138252993 138252993 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164665 exon2 c.C1919T p.S640L . . . KIAA1549 57670 broad.mit.edu 36 7 138253798 138253798 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164665 exon2 c.G1114A p.A372T . . . TAS2R4 50832 broad.mit.edu 36 7 141125242 141125242 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016944 exon1 c.C485T p.T162M . . . TRPV5 56302 broad.mit.edu 36 7 142337585 142337585 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019841 exon2 c.C207T p.T69T . . . EPHA1 2041 broad.mit.edu 36 7 142807124 142807124 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005232 exon4 c.G577A p.A193T . . . ARHGEF35 445328 broad.mit.edu 36 7 143516401 143516401 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003702 exon2 c.T9C p.A3A . . . CNTNAP2 26047 broad.mit.edu 36 7 146371969 146371969 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014141 exon4 c.G440A p.R147Q . . . EZH2 2146 broad.mit.edu 36 7 148145921 148145921 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152998 exon9 c.T1089C p.D363D . . . ZNF786 136051 broad.mit.edu 36 7 148400117 148400117 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152411 exon4 c.C680T p.T227M . . . ZNF425 155054 broad.mit.edu 36 7 148432522 148432522 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001661 exon4 c.C1374T p.R458R . . . ZNF746 155061 broad.mit.edu 36 7 148822082 148822082 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163474 exon3 c.C337T p.L113L . . . KRBA1 84626 broad.mit.edu 36 7 149058571 149058571 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032534 exon15 c.A2125G p.T709A . . . SSPO 23145 broad.mit.edu 36 7 149106902 149106902 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198455 exon7 c.A935G p.D312G . . . GIMAP8 155038 broad.mit.edu 36 7 149794747 149794747 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175571 exon2 c.G28A p.E10K . . . AGAP3 116988 broad.mit.edu 36 7 150462498 150462498 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031946 exon11 c.C1405T p.R469X . . . NUB1 51667 broad.mit.edu 36 7 150695938 150695938 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016118 exon10 c.G1046A p.R349Q . . . NUB1 51667 broad.mit.edu 36 7 150705108 150705108 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016118 exon15 c.C1670T p.A557V . . . LMBR1 64327 broad.mit.edu 36 7 156322311 156322311 + De_novo_Start_InFrame SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022458 exon2 c.C96T p.Y32Y . . . NCAPG2 54892 broad.mit.edu 36 7 158150011 158150011 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017760 exon14 c.G1672A p.A558T . . . NCAPG2 54892 broad.mit.edu 36 7 158150166 158150166 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017760 exon14 c.G1517A p.R506H . . . ESYT2 57488 broad.mit.edu 36 7 158224477 158224477 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020728 exon18 c.C2346T p.C782C . . . ANKMY2 57037 broad.mit.edu 36 7 16633262 16633262 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020319 exon3 c.C199T p.R67X . . . PRPS1L1 221823 broad.mit.edu 36 7 18033739 18033739 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175886 exon1 c.C192T p.N64N . . . FERD3L 222894 broad.mit.edu 36 7 19151310 19151310 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152898 exon1 c.C201T p.C67C . . . NUDT1 4521 broad.mit.edu 36 7 2256995 2256995 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198949 exon5 c.C373T p.R125C . . . DFNA5 1687 broad.mit.edu 36 7 24723438 24723438 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127453 exon5 c.C657T p.Y219Y . . . NFE2L3 9603 broad.mit.edu 36 7 26191844 26191844 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004289 exon4 c.C2001T p.T667T . . . AMZ1 155185 broad.mit.edu 36 7 2706687 2706687 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133463 exon2 c.G76A p.A26T . . . CRHR2 1395 broad.mit.edu 36 7 30661792 30661792 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001883 exon10 c.G982A p.V328I . . . STARD3NL 83930 broad.mit.edu 36 7 38220553 38220553 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032016 exon3 c.A296G p.D99G . . . SDK1 221935 broad.mit.edu 36 7 4119554 4119554 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152744 exon24 c.C3542T p.T1181M . . . SDK1 221935 broad.mit.edu 36 7 4151942 4151942 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152744 exon29 c.G4291A p.G1431S . . . INHBA 3624 broad.mit.edu 36 7 41695870 41695870 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002192 exon3 c.A1184G p.K395R . . . MRPL32 64983 broad.mit.edu 36 7 42941201 42941201 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031903 exon2 c.C253T p.R85C . . . DBNL 28988 broad.mit.edu 36 7 44067022 44067022 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014063 exon13 c.C1278T p.Y426Y . . . DDX56 54606 broad.mit.edu 36 7 44578551 44578551 + Missense_Mutation SNP G A A rs62459150 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019082 exon5 c.C565T p.R189W . . . OGDH 4967 broad.mit.edu 36 7 44702569 44702569 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002541 exon14 c.C1788T p.D596D . . . ZMIZ2 83637 broad.mit.edu 36 7 44771546 44771546 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174929 exon14 c.G2007A p.P669P . . . MMD2 221938 broad.mit.edu 36 7 4916153 4916153 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100600 exon6 c.G494A p.R165H . . . PDGFA 5154 broad.mit.edu 36 7 507327 507327 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002607 exon5 c.G532A p.A178T . . . COBL 23242 broad.mit.edu 36 7 51171454 51171454 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015198 exon6 c.G852A p.S284S . . . TNRC18 84629 broad.mit.edu 36 7 5368897 5368897 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080495 exon12 c.G4305A p.G1435G . . . EGFR 1956 broad.mit.edu 36 7 55191067 55191067 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201282 exon8 c.G940A p.D314N . . . VOPP1 81552 broad.mit.edu 36 7 55508213 55508213 + Missense_Mutation SNP C T T rs11238366 byCluster;by2Hit2Allele TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030796 exon5 c.G348A p.P116P . . . SUMF2 25870 broad.mit.edu 36 7 56109902 56109902 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042469 exon4 c.G526A p.A176T . . . PMS2 5395 broad.mit.edu 36 7 5984762 5984762 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000535 exon13 c.G2266A p.D756N . . . PMS2 5395 broad.mit.edu 36 7 6005339 6005339 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000535 exon6 c.C631T p.R211X . . . ZNF92 168374 broad.mit.edu 36 7 64501218 64501218 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152626 exon4 c.T756C p.T252T . . . MIOS 54468 broad.mit.edu 36 7 7601224 7601224 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019005 exon10 c.A2132G p.H711R . . . SEMA3C 10512 broad.mit.edu 36 7 80256564 80256564 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006379 exon12 c.G1348A p.G450R . . . PCLO 27445 broad.mit.edu 36 7 82289829 82289829 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon20 c.C14709T p.S4903S . . . PCLO 27445 broad.mit.edu 36 7 82308755 82308755 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon14 c.G14053A p.D4685N . . . PCLO 27445 broad.mit.edu 36 7 82418384 82418384 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon6 c.G9456A p.T3152T . . . DMTF1 9988 broad.mit.edu 36 7 86649525 86649525 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142327 exon10 c.G756A p.A252A . . . RUNDC3B 154661 broad.mit.edu 36 7 87208762 87208762 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134405 exon6 c.A560C p.K187T . . . STEAP1 26872 broad.mit.edu 36 7 89628359 89628359 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012449 exon3 c.A389G p.Y130C . . . C7orf63 79846 broad.mit.edu 36 7 89712702 89712702 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160138 exon1 c.G28A p.A10T . . . ANKIB1 54467 broad.mit.edu 36 7 91774872 91774872 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019004 exon3 c.A452G p.Y151C . . . SAMD9 54809 broad.mit.edu 36 7 92569684 92569684 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193307 exon2 c.T3663C p.N1221N . . . TFPI2 7980 broad.mit.edu 36 7 93357440 93357440 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006528 exon2 c.C216T p.N72N . . . PPP1R9A 55607 broad.mit.edu 36 7 94378081 94378081 + Silent SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166163 exon1 c.T720G p.S240S . . . TECPR1 25851 broad.mit.edu 36 7 97689663 97689663 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015395 exon22 c.G3035A p.R1012Q . . . BAIAP2L1 55971 broad.mit.edu 36 7 97822311 97822311 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018842 exon3 c.T193C p.S65P . . . NPTX2 4885 broad.mit.edu 36 7 98095655 98095655 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002523 exon5 c.C1074T p.T358T . . . TRRAP 8295 broad.mit.edu 36 7 98383878 98383878 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003496 exon32 c.G4572A p.T1524T . . . TRRAP 8295 broad.mit.edu 36 7 98429186 98429186 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003496 exon64 c.C9808T p.R3270C TRRAP,large_intestine,NS,Substitution - Missense,-1 . . ARPC1B 10095 broad.mit.edu 36 7 98823731 98823731 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005720 exon4 c.C303T p.C101C . . . COPS6 10980 broad.mit.edu 36 7 99526647 99526647 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006833 exon7 c.G585A p.A195A . . . GAL3ST4 79690 broad.mit.edu 36 7 99595630 99595630 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024637 exon4 c.C1318T p.R440W . . . GAL3ST4 79690 broad.mit.edu 36 7 99596042 99596042 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024637 exon4 c.G906A p.M302I . . . MIR182 406958 broad.mit.edu 36 7 129197464 129197464 + RNA SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF767 79970 broad.mit.edu 36 7 148947964 148947964 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LOC389458 389458 broad.mit.edu 36 7 5079254 5079254 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VPS13B 157680 broad.mit.edu 36 8 100523869 100523869 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon23 c.T3275C p.V1092A . . . VPS13B 157680 broad.mit.edu 36 8 100899007 100899007 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon45 c.G8161A p.V2721I . . . RGS22 26166 broad.mit.edu 36 8 101121384 101121384 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015668 exon13 c.C2046T p.C682C . . . ABRA 137735 broad.mit.edu 36 8 107851352 107851352 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139166 exon1 c.G243A p.S81S . . . KCNV1 27012 broad.mit.edu 36 8 111053792 111053792 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014379 exon2 c.A862G p.I288V . . . TRPS1 7227 broad.mit.edu 36 8 116495492 116495492 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon7 c.C3820T p.H1274Y . . . TRPS1 7227 broad.mit.edu 36 8 116668886 116668886 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon5 c.C2217T p.G739G . . . EIF3H 8667 broad.mit.edu 36 8 117837211 117837211 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003756 exon1 c.T7C p.S3P . . . EXT1 2131 broad.mit.edu 36 8 118881211 118881211 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000127 exon11 c.A2162G p.Q721R . . . DLC1 10395 broad.mit.edu 36 8 13295434 13295434 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon4 c.C1313T p.T438M . . . TG 7038 broad.mit.edu 36 8 134022938 134022938 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003235 exon26 c.C5202T p.C1734C . . . ZFAT 57623 broad.mit.edu 36 8 135682006 135682006 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174157 exon6 c.A2144G p.Y715C . . . FAM135B 51059 broad.mit.edu 36 8 139233993 139233993 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015912 exon13 c.C1907T p.T636I . . . FAM135B 51059 broad.mit.edu 36 8 139276688 139276688 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015912 exon9 c.C868A p.L290I . . . COL22A1 169044 broad.mit.edu 36 8 139902579 139902579 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152888 exon7 c.C1227T p.Y409Y . . . KCNK9 51305 broad.mit.edu 36 8 140700244 140700244 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016601 exon2 c.C564T p.H188H . . . SLC45A4 57210 broad.mit.edu 36 8 142298182 142298182 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080431 exon4 c.G586A p.A196T . . . PSCA 8000 broad.mit.edu 36 8 143760398 143760398 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005672 exon3 c.A191G p.D64G . . . VPS28 51160 broad.mit.edu 36 8 145620998 145620998 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183057 exon7 c.C313T p.L105L . . . ZNF517 340385 broad.mit.edu 36 8 146003688 146003688 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213605 exon5 c.C583T p.H195Y . . . EFHA2 286097 broad.mit.edu 36 8 17006303 17006303 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181723 exon10 c.T1017C p.D339D . . . BMP1 649 broad.mit.edu 36 8 22123078 22123078 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006129 exon19 c.C2751T p.C917C . . . BMP1 649 broad.mit.edu 36 8 22125139 22125139 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006129 exon20 c.C2914T p.R972X . . . NKX3-1 4824 broad.mit.edu 36 8 23595014 23595014 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006167 exon2 c.C370T p.Q124X . . . ADAM7 8756 broad.mit.edu 36 8 24400714 24400714 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003817 exon11 c.A1085T p.D362V . . . BNIP3L 665 broad.mit.edu 36 8 26308665 26308665 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004331 exon3 c.C287A p.P96H . . . DPYSL2 1808 broad.mit.edu 36 8 26540713 26540713 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001386 exon6 c.C606T p.G202G . . . ADRA1A 148 broad.mit.edu 36 8 26778076 26778076 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033302 exon1 c.T328C p.C110R . . . EPHX2 2053 broad.mit.edu 36 8 27454018 27454018 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001979 exon15 c.C1307A p.P436H . . . CLU 1191 broad.mit.edu 36 8 27513243 27513243 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171138 exon7 c.G1168A p.E390K . . . SCARA3 51435 broad.mit.edu 36 8 27584556 27584556 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016240 exon6 c.T1590C p.T530T . . . CSMD1 64478 broad.mit.edu 36 8 2796068 2796068 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon66 c.C10177T p.L3393F . . . EXTL3 2137 broad.mit.edu 36 8 28664102 28664102 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001440 exon7 c.C2560T p.R854W . . . WRN 7486 broad.mit.edu 36 8 31097448 31097448 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000553 exon21 c.G2596A p.V866I . . . NRG1 3084 broad.mit.edu 36 8 32731480 32731480 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013957 exon8 c.G740A p.C247Y . . . BRF2 55290 broad.mit.edu 36 8 37823561 37823561 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018310 exon3 c.T505G p.L169V . . . GOT1L1 137362 broad.mit.edu 36 8 37913714 37913714 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152413 exon5 c.G538A p.V180I . . . ADAM2 2515 broad.mit.edu 36 8 39765384 39765384 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001464 exon8 c.C603T p.V201V . . . ZMAT4 79698 broad.mit.edu 36 8 40651578 40651578 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024645 exon5 c.C379T p.R127W . . . AGPAT6 137964 broad.mit.edu 36 8 41595643 41595643 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178819 exon12 c.G1252T p.D418Y . . . NSMAF 8439 broad.mit.edu 36 8 59698495 59698495 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003580 exon8 c.G499A p.A167T . . . PREX2 80243 broad.mit.edu 36 8 69096840 69096840 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025170 exon4 c.A352T p.I118F . . . C8orf34 116328 broad.mit.edu 36 8 69514301 69514301 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052958 exon2 c.A341C p.K114T . . . SLCO5A1 81796 broad.mit.edu 36 8 70906832 70906832 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030958 exon2 c.C631A p.L211I . . . MSC 9242 broad.mit.edu 36 8 72917508 72917508 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005098 exon2 c.C563T p.P188L . . . TRPA1 8989 broad.mit.edu 36 8 73112841 73112841 + Silent SNP A T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007332 exon20 c.T2316A p.T772T . . . TRPA1 8989 broad.mit.edu 36 8 73150131 73150131 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007332 exon1 c.A68G p.E23G . . . KCNB2 9312 broad.mit.edu 36 8 74011132 74011132 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004770 exon3 c.C988T p.R330W . . . SGK223 157285 broad.mit.edu 36 8 8222656 8222656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080826 exon4 c.G3046A p.G1016S . . . SGK223 157285 broad.mit.edu 36 8 8222935 8222935 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080826 exon4 c.G2767A p.V923M . . . SLC7A13 157724 broad.mit.edu 36 8 87295838 87295838 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138817 exon4 c.A1333T p.R445X . . . DCAF4L2 138009 broad.mit.edu 36 8 88954498 88954498 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152418 exon1 c.T818C p.V273A . . . PPP1R3B 79660 broad.mit.edu 36 8 9036175 9036175 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024607 exon2 c.G397A p.V133I . . . TMEM55A 55529 broad.mit.edu 36 8 92090172 92090172 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018710 exon5 c.G514A p.A172T . . . KIAA1429 25962 broad.mit.edu 36 8 95608511 95608511 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015496 exon8 c.C1137T p.I379I . . . POP1 10940 broad.mit.edu 36 8 99211616 99211616 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145860 exon5 c.C721T p.R241W . . . STK3 6788 broad.mit.edu 36 8 99848723 99848723 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006281 exon3 c.G160A p.A54T . . . COL15A1 1306 broad.mit.edu 36 9 100825504 100825504 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001855 exon14 c.C1806T p.D602D . . . INVS 27130 broad.mit.edu 36 9 102028259 102028259 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183245 exon4 c.G368A p.R123Q . . . TMEFF1 8577 broad.mit.edu 36 9 102244194 102244194 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080655 exon2 c.G153A p.A51A . . . ABCA1 19 broad.mit.edu 36 9 106601941 106601941 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005502 exon36 c.G4923A p.Q1641Q . . . ABCA1 19 broad.mit.edu 36 9 106685185 106685185 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005502 exon5 c.G377A p.R126H . . . ZNF462 58499 broad.mit.edu 36 9 108727229 108727229 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021224 exon3 c.T1215C p.D405D . . . CTNNAL1 8727 broad.mit.edu 36 9 110801244 110801244 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003798 exon2 c.A255G p.V85V . . . EPB41L4B 54566 broad.mit.edu 36 9 111057625 111057625 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018424 exon11 c.C1156T p.R386C . . . C9orf152 401546 broad.mit.edu 36 9 112003413 112003413 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012993 exon2 c.C356T p.T119M . . . SLC46A2 57864 broad.mit.edu 36 9 114688659 114688659 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033051 exon3 c.C1272A p.T424T . . . TNC 3371 broad.mit.edu 36 9 116828692 116828692 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002160 exon26 c.C6273T p.S2091S . . . TNC 3371 broad.mit.edu 36 9 116878671 116878671 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002160 exon8 c.C2679T p.L893L . . . ASTN2 23245 broad.mit.edu 36 9 118244577 118244577 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198186 exon6 c.C877T p.L293L . . . TRIM32 22954 broad.mit.edu 36 9 118500966 118500966 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099679 exon2 c.T1124G p.V375G . . . LHX6 26468 broad.mit.edu 36 9 124019386 124019386 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199160 exon5 c.G464A p.R155Q . . . OR1N2 138882 broad.mit.edu 36 9 124355379 124355379 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004457 exon1 c.G110A p.W37X . . . OR5C1 392391 broad.mit.edu 36 9 124591715 124591715 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001923 exon1 c.C683T p.A228V . . . NR6A1 2649 broad.mit.edu 36 9 126338133 126338133 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033334 exon7 c.C924A p.F308L . . . SCAI 286205 broad.mit.edu 36 9 126829005 126829005 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173690 exon7 c.G488A p.R163H . . . GAPVD1 26130 broad.mit.edu 36 9 127151533 127151533 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015635 exon20 c.C3294T p.D1098D . . . PBX3 5090 broad.mit.edu 36 9 127731860 127731860 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006195 exon4 c.C622T p.R208X . . . ZBTB34 403341 broad.mit.edu 36 9 128682838 128682838 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099270 exon2 c.C1327A p.L443I . . . ODF2 4957 broad.mit.edu 36 9 130296743 130296743 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153439 exon16 c.C1874T p.A625V . . . SPTAN1 6709 broad.mit.edu 36 9 130385985 130385985 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195532 exon16 c.G2109A p.S703S . . . SPTAN1 6709 broad.mit.edu 36 9 130407423 130407423 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195532 exon30 c.C3832T p.R1278C . . . DOLK 22845 broad.mit.edu 36 9 130749061 130749061 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014908 exon1 c.G343C p.A115P . . . TOR1A 1861 broad.mit.edu 36 9 131616309 131616309 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000113 exon5 c.C762T p.H254H . . . ASS1 445 broad.mit.edu 36 9 132331952 132331952 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000050 exon7 c.T440C p.M147T . . . SETX 23064 broad.mit.edu 36 9 134214535 134214535 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015046 exon3 c.C102T p.D34D . . . C9orf96 169436 broad.mit.edu 36 9 135260209 135260209 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153710 exon18 c.C1886T p.P629L . . . VAV2 7410 broad.mit.edu 36 9 135623513 135623513 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134398 exon29 c.G2461T p.A821S . . . COL5A1 1289 broad.mit.edu 36 9 136795385 136795385 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000093 exon20 c.G2015T p.R672M . . . COL5A1 1289 broad.mit.edu 36 9 136850560 136850560 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000093 exon56 c.G4384A p.G1462S . . . SEC16A 9919 broad.mit.edu 36 9 138491071 138491071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014866 exon3 c.C818T p.A273V . . . C9orf173 441476 broad.mit.edu 36 9 139266347 139266347 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004353 exon3 c.G342A p.P114P . . . NOXA1 10811 broad.mit.edu 36 9 139440559 139440559 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006647 exon2 c.G216A p.A72A . . . PNPLA7 375775 broad.mit.edu 36 9 139535935 139535935 + Missense_Mutation SNP C T T rs2298171 byFrequency;byHapMap TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152286 exon9 c.G856A p.G286S . . . NFIB 4781 broad.mit.edu 36 9 14136730 14136730 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190738 exon6 c.T961C p.S321P . . . TTC39B 158219 broad.mit.edu 36 9 15215991 15215991 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168340 exon3 c.G295A p.A99T . . . SNAPC3 6619 broad.mit.edu 36 9 15413928 15413928 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039697 exon2 c.T336C p.L112L . . . C9orf93 203238 broad.mit.edu 36 9 15685249 15685249 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173550 exon11 c.C1232A p.A411D . . . MLLT3 4300 broad.mit.edu 36 9 20403791 20403791 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004529 exon5 c.G1053A p.T351T . . . KCNV2 169522 broad.mit.edu 36 9 2707905 2707905 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133497 exon1 c.G166A p.E56K . . . KCNV2 169522 broad.mit.edu 36 9 2708710 2708710 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133497 exon1 c.C971T p.T324M . . . KCNV2 169522 broad.mit.edu 36 9 2708982 2708982 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133497 exon1 c.C1243T p.L415L . . . TEK 7010 broad.mit.edu 36 9 27147989 27147989 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000459 exon2 c.G213A p.P71P . . . KIAA0020 9933 broad.mit.edu 36 9 2801476 2801476 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014878 exon15 c.C1520T p.A507V . . . B4GALT1 2683 broad.mit.edu 36 9 33103848 33103848 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001497 exon5 c.C988T p.R330C . . . AQP7 364 broad.mit.edu 36 9 33375103 33375103 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170 exon8 c.C929T p.T310M . . . AQP3 360 broad.mit.edu 36 9 33433872 33433872 + Missense_Mutation SNP C T T rs34942735 unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004925 exon2 c.G127A p.V43M . . . UBAP2 55833 broad.mit.edu 36 9 33914247 33914247 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018449 exon23 c.G2547A p.A849A . . . IL11RA 3590 broad.mit.edu 36 9 34648543 34648543 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142784 exon8 c.C673T p.R225W . . . VCP 7415 broad.mit.edu 36 9 35052244 35052244 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007126 exon8 c.G915A p.E305E . . . UNC13B 10497 broad.mit.edu 36 9 35388614 35388614 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006377 exon31 c.G3649T p.E1217X . . . NPR2 4882 broad.mit.edu 36 9 35789675 35789675 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003995 exon3 c.C934T p.R312C . . . SPAG8 26206 broad.mit.edu 36 9 35800674 35800674 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172312 exon4 c.C1045T p.R349C . . . RECK 8434 broad.mit.edu 36 9 36112920 36112920 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021111 exon21 c.T2794G p.S932A . . . MELK 9833 broad.mit.edu 36 9 36660999 36660999 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014791 exon16 c.C1510T p.R504C . . . FRMPD1 22844 broad.mit.edu 36 9 37730705 37730705 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014907 exon15 c.C2180T p.A727V . . . ALDH1B1 219 broad.mit.edu 36 9 38386960 38386960 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000692 exon2 c.C1215T p.G405G . . . GLIS3 169792 broad.mit.edu 36 9 4108462 4108462 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152629 exon3 c.C551A p.A184D . . . PRKACG 5568 broad.mit.edu 36 9 70818714 70818714 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002732 exon1 c.G115A p.A39T . . . KDM4C 23081 broad.mit.edu 36 9 7093868 7093868 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015061 exon18 c.G2608A p.V870M . . . MAMDC2 256691 broad.mit.edu 36 9 71948359 71948359 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153267 exon9 c.C1208T p.S403F . . . MAMDC2 256691 broad.mit.edu 36 9 72030524 72030524 + Silent SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153267 exon13 c.T1950C p.S650S . . . TMEM2 23670 broad.mit.edu 36 9 73494891 73494891 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013390 exon22 c.C3788T p.T1263M . . . TRPM6 140803 broad.mit.edu 36 9 76543173 76543173 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177310 exon36 c.C5731T p.R1911W . . . VPS13A 23230 broad.mit.edu 36 9 79145157 79145157 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon49 c.C6780T p.D2260D . . . HNRNPK 3190 broad.mit.edu 36 9 85776804 85776804 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002140 exon11 c.C766T p.R256W . . . DAPK1 1612 broad.mit.edu 36 9 89491327 89491327 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004938 exon21 c.G2266A p.V756M . . . DAPK1 1612 broad.mit.edu 36 9 89512033 89512033 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004938 exon26 c.G4227T p.E1409D . . . C9orf79 286234 broad.mit.edu 36 9 89690752 89690752 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178828 exon4 c.G1530A p.W510X . . . C9orf79 286234 broad.mit.edu 36 9 89692573 89692573 + Silent SNP G T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178828 exon4 c.G3351T p.P1117P . . . CDK20 23552 broad.mit.edu 36 9 89775350 89775350 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039803 exon5 c.C516T p.P172P . . . SECISBP2 79048 broad.mit.edu 36 9 91155432 91155432 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024077 exon14 c.T1958C p.V653A . . . SEMA4D 10507 broad.mit.edu 36 9 91168680 91168680 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001142287 exon19 c.G1888A p.A630T . . . SEMA4D 10507 broad.mit.edu 36 9 91196018 91196018 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142287 exon11 c.G755A p.R252Q . . . PHF2 5253 broad.mit.edu 36 9 95465010 95465010 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005392 exon13 c.G1699A p.A567T . . . PTCH1 5727 broad.mit.edu 36 9 97318796 97318796 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083603 exon1 c.G128A p.G43E . . . ZNF367 195828 broad.mit.edu 36 9 98200404 98200404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153695 exon2 c.G434A p.R145H . . . LOC57653 57653 broad.mit.edu 36 9 99178939 99178939 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020893 exon37 c.A5048G p.Q1683R . . . CORO2A 7464 broad.mit.edu 36 9 99934294 99934294 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003389 exon6 c.G759T p.W253C . . . PHF2 5253 broad.mit.edu 36 9 95462433 95462433 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005392 exon12 c.1468delA p.K490fs . . . CXorf66 347487 broad.mit.edu 36 X 138865990 138865991 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013403 exon3 c.817_818insA p.H273fs . . . XKRX 402415 broad.mit.edu 36 X 100064534 100064534 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212559 exon2 c.C508T p.R170C . . . GLRA4 441509 broad.mit.edu 36 X 102860658 102860658 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172285 exon7 c.C916T p.R306W . . . TEX13B 56156 broad.mit.edu 36 X 107111917 107111917 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031273 exon2 c.G97A p.E33K . . . COL4A6 1288 broad.mit.edu 36 X 107305055 107305055 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033641 exon30 c.T2877C p.R959R . . . KLHL13 90293 broad.mit.edu 36 X 116927580 116927580 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168300 exon5 c.C1060T p.R354C . . . NKRF 55922 broad.mit.edu 36 X 118608028 118608028 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173487 exon4 c.G1433A p.R478Q . . . ZBTB33 10009 broad.mit.edu 36 X 119271963 119271963 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006777 exon2 c.G665A p.G222D . . . UTP14A 10813 broad.mit.edu 36 X 128873483 128873483 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006649 exon6 c.G442A p.V148I . . . GPC3 2719 broad.mit.edu 36 X 132661625 132661625 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164618 exon4 c.A1082G p.H361R . . . HPRT1 3251 broad.mit.edu 36 X 133436885 133436885 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000194 exon3 c.G143A p.R48H . . . SAGE1 55511 broad.mit.edu 36 X 134816325 134816325 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018666 exon7 c.C685T p.R229C . . . ARHGEF6 9459 broad.mit.edu 36 X 135592629 135592629 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004840 exon13 c.T1433C p.L478P . . . CLIC2 1193 broad.mit.edu 36 X 154160413 154160413 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001289 exon6 c.C717T p.Y239Y . . . NHS 4810 broad.mit.edu 36 X 17656038 17656038 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136024 exon7 c.C3360T p.D1120D . . . SCML2 10389 broad.mit.edu 36 X 18175873 18175873 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006089 exon12 c.A1507C p.T503P . . . PHKA2 5256 broad.mit.edu 36 X 18828729 18828729 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000292 exon28 c.C3037T p.R1013W . . . GPR64 10149 broad.mit.edu 36 X 18938801 18938801 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184837 exon15 c.C1026T p.S342S . . . PCYT1B 9468 broad.mit.edu 36 X 24507431 24507431 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163264 exon6 c.C577T p.R193C . . . MAGEB18 286514 broad.mit.edu 36 X 26067616 26067616 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173699 exon2 c.G593A p.G198D . . . TAB3 257397 broad.mit.edu 36 X 30782953 30782953 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152787 exon6 c.G750A p.W250X . . . SYTL5 94122 broad.mit.edu 36 X 37846609 37846609 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138780 exon10 c.G1133A p.R378H . . . DUSP21 63904 broad.mit.edu 36 X 44588679 44588679 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022076 exon1 c.G357A p.A119A . . . TIMP1 7076 broad.mit.edu 36 X 47329624 47329624 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003254 exon4 c.G278A p.C93Y . . . SSX5 6758 broad.mit.edu 36 X 47939671 47939671 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175723 exon2 c.A68C p.K23T . . . GATA1 2623 broad.mit.edu 36 X 48535423 48535423 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002049 exon3 c.C449A p.P150H . . . GRIPAP1 56850 broad.mit.edu 36 X 48732311 48732311 + Silent SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020137 exon7 c.T613C p.L205L . . . SMC1A 8243 broad.mit.edu 36 X 53455726 53455726 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006306 exon6 c.C1057T p.R353W . . . PAGE5 90737 broad.mit.edu 36 X 55263766 55263766 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130467 exon1 c.G9A p.A3A . . . DGAT2L6 347516 broad.mit.edu 36 X 69338529 69338529 + Silent SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198512 exon5 c.C537T p.A179A . . . P2RY4 5030 broad.mit.edu 36 X 69395466 69395466 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002565 exon1 c.G734A p.R245H . . . ARR3 407 broad.mit.edu 36 X 69414014 69414014 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004312 exon9 c.G519A p.P173P . . . GDPD2 54857 broad.mit.edu 36 X 69563573 69563573 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171193 exon7 c.G452A p.R151Q . . . TAF1 6872 broad.mit.edu 36 X 70524015 70524015 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138923 exon15 c.G2403A p.T801T . . . MAGEE2 139599 broad.mit.edu 36 X 74921522 74921522 + Silent SNP G A A novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138703 exon1 c.C90T p.N30N . . . FAM46D 169966 broad.mit.edu 36 X 79585172 79585172 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170574 exon5 c.A478C p.K160Q . . . KLHL4 56062 broad.mit.edu 36 X 86659860 86659860 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057162 exon1 c.A308G p.N103S . . . BRWD3 254065 broad.mit.edu 36 X 79865933 79865933 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A01R-01A-21W-A096-10 TCGA-AA-A01R-11A-12W-A096-10 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153252 exon16 c.1620delT p.F540fs . . .