Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target HPSE2 60495 broad.mit.edu 36 10 100894110 100894110 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166246 exon3 c.A485C p.K162T . . . HPSE2 60495 broad.mit.edu 36 10 100985376 100985376 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166246 exon1 c.G174T p.K58N . . . CNNM1 26507 broad.mit.edu 36 10 101137905 101137905 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020348 exon9 c.G2531A p.R844H . . . ENTPD7 57089 broad.mit.edu 36 10 101429058 101429058 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020354 exon4 c.A242C p.N81T . . . ENTPD7 57089 broad.mit.edu 36 10 101445832 101445832 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020354 exon9 c.G973A p.E325K . . . COX15 1355 broad.mit.edu 36 10 101479316 101479316 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004376 exon2 c.C256A p.L86I . . . ABCC2 1244 broad.mit.edu 36 10 101541986 101541986 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000392 exon3 c.C213T p.F71F . . . DNMBP 23268 broad.mit.edu 36 10 101706429 101706429 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015221 exon4 c.C792T p.F264F . . . PKD2L1 9033 broad.mit.edu 36 10 102044760 102044760 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016112 exon8 c.C1467T p.F489F . . . C10orf76 79591 broad.mit.edu 36 10 103759746 103759746 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024541 exon12 c.G856A p.A286T . . . LDB1 8861 broad.mit.edu 36 10 103857953 103857953 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113407 exon11 c.G1123A p.E375K . . . NOLC1 9221 broad.mit.edu 36 10 103909765 103909765 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004741 exon8 c.G982T p.E328X . . . NOLC1 9221 broad.mit.edu 36 10 103911608 103911608 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004741 exon12 c.G1877A p.R626Q . . . NFKB2 4791 broad.mit.edu 36 10 104151513 104151513 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077493 exon21 c.A2315G p.D772G . . . SUFU 51684 broad.mit.edu 36 10 104258953 104258953 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016169 exon2 c.T220C p.Y74H . . . NT5C2 22978 broad.mit.edu 36 10 104842962 104842962 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012229 exon15 c.G1083T p.K361N . . . GTPBP4 23560 broad.mit.edu 36 10 1050250 1050250 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012341 exon15 c.G1606A p.D536N . . . IDI2 91734 broad.mit.edu 36 10 1058668 1058668 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033261 exon3 c.C190T p.R64X . . . C10orf79 80217 broad.mit.edu 36 10 105913949 105913949 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025145 exon24 c.C3139T p.R1047X . . . C10orf79 80217 broad.mit.edu 36 10 105975215 105975215 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025145 exon3 c.C410T p.A137V . . . CCDC147 159686 broad.mit.edu 36 10 106118217 106118217 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001008723 exon6 c.G839A p.R280K . . . SORCS3 22986 broad.mit.edu 36 10 106995344 106995344 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014978 exon21 c.G2923A p.D975N . . . SORCS1 114815 broad.mit.edu 36 10 108329137 108329137 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052918 exon25 c.C3351T p.F1117F . . . SORCS1 114815 broad.mit.edu 36 10 108370263 108370263 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052918 exon20 c.G2709T p.K903N . . . HABP2 3026 broad.mit.edu 36 10 115333092 115333092 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177660 exon10 c.C1144A p.P382T . . . NRAP 4892 broad.mit.edu 36 10 115362117 115362117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198060 exon30 c.G3364A p.A1122T . . . NRAP 4892 broad.mit.edu 36 10 115364593 115364593 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198060 exon28 c.A3181C p.S1061R . . . NRAP 4892 broad.mit.edu 36 10 115378741 115378741 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198060 exon20 c.G2070A p.M690I . . . NRAP 4892 broad.mit.edu 36 10 115396686 115396686 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198060 exon10 c.G979T p.E327X . . . DCLRE1A 9937 broad.mit.edu 36 10 115595522 115595522 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014881 exon4 c.C2290A p.H764N DCLRE1A,skin,NS,Substitution - Missense,0 . . DCLRE1A 9937 broad.mit.edu 36 10 115599138 115599138 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014881 exon2 c.G1716T p.E572D . . . TDRD1 56165 broad.mit.edu 36 10 115963328 115963328 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198795 exon15 c.G2065T p.E689X . . . TDRD1 56165 broad.mit.edu 36 10 115963833 115963833 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198795 exon16 c.G2182A p.E728K . . . TDRD1 56165 broad.mit.edu 36 10 115977848 115977848 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198795 exon25 c.T3512G p.F1171C . . . TRUB1 142940 broad.mit.edu 36 10 116692481 116692481 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_139169 exon2 c.G374A p.R125Q . . . ATRNL1 26033 broad.mit.edu 36 10 117476823 117476823 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_207303 exon27 c.G3871T p.E1291X . . . PNLIPRP3 119548 broad.mit.edu 36 10 118210548 118210548 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011709 exon6 c.G646A p.V216I . . . ECHDC3 79746 broad.mit.edu 36 10 11829360 11829360 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024693 exon2 c.C177T p.I59I . . . PNLIP 5406 broad.mit.edu 36 10 118300644 118300644 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000936 exon5 c.G369T p.W123C . . . PNLIPRP2 5408 broad.mit.edu 36 10 118384382 118384382 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005396 exon9 c.C860T p.S287L . . . PDZD8 118987 broad.mit.edu 36 10 119034677 119034677 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173791 exon5 c.T1557G p.S519R . . . EIF3A 8661 broad.mit.edu 36 10 120808784 120808784 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003750 exon11 c.G1559T p.R520I . . . UPF2 26019 broad.mit.edu 36 10 12111336 12111336 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080599 exon3 c.G559T p.D187Y . . . TIAL1 7073 broad.mit.edu 36 10 121327187 121327187 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001033925 exon8 c.A659C p.K220T . . . SEC23IP 11196 broad.mit.edu 36 10 121682588 121682588 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007190 exon17 c.G2840A p.R947Q . . . DHTKD1 55526 broad.mit.edu 36 10 12169593 12169593 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018706 exon4 c.C576T p.G192G . . . ATE1 11101 broad.mit.edu 36 10 123673774 123673774 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001001976 exon2 c.G167A p.R56Q . . . DMBT1 1755 broad.mit.edu 36 10 124329125 124329125 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007329 exon10 c.G721A p.D241N . . . DMBT1 1755 broad.mit.edu 36 10 124366751 124366751 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007329 exon37 c.C4489G p.R1497G . . . DMBT1 1755 broad.mit.edu 36 10 124370862 124370862 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007329 exon41 c.G5197A p.E1733K . . . C10orf120 399814 broad.mit.edu 36 10 124447284 124447284 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010912 exon3 c.T963G p.S321R . . . CUZD1 50624 broad.mit.edu 36 10 124583199 124583199 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022034 exon8 c.C1630T p.R544X . . . CUZD1 50624 broad.mit.edu 36 10 124587044 124587044 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022034 exon4 c.C465T p.G155G . . . PSTK 118672 broad.mit.edu 36 10 124732292 124732292 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153336 exon2 c.C270A p.F90L . . . C10orf137 26098 broad.mit.edu 36 10 127404353 127404353 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015608 exon6 c.G748A p.E250K . . . C10orf137 26098 broad.mit.edu 36 10 127419622 127419622 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015608 exon16 c.T2131C p.L711L . . . C10orf137 26098 broad.mit.edu 36 10 127428069 127428069 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015608 exon21 c.C3120T p.C1040C . . . ADAM12 8038 broad.mit.edu 36 10 127796636 127796636 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021641 exon6 c.G573T p.K191N . . . FAM196A 642938 broad.mit.edu 36 10 128842176 128842176 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039762 exon5 c.C1186T p.L396F . . . MKI67 4288 broad.mit.edu 36 10 129791975 129791975 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145966 exon12 c.G7039A p.E2347K . . . MKI67 4288 broad.mit.edu 36 10 129796092 129796092 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145966 exon12 c.A2922C p.Q974H . . . OPTN 10133 broad.mit.edu 36 10 13192361 13192361 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021980 exon3 c.G248A p.R83H . . . PHYH 5264 broad.mit.edu 36 10 13360338 13360338 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037537 exon8 c.G686A p.R229Q . . . PHYH 5264 broad.mit.edu 36 10 13377574 13377574 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006214 exon3 c.G173T p.R58I . . . LRRC27 80313 broad.mit.edu 36 10 134011618 134011618 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143758 exon6 c.C694T p.L232F . . . FRMD4A 55691 broad.mit.edu 36 10 13789080 13789080 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018027 exon13 c.G799T p.E267X . . . NMT2 9397 broad.mit.edu 36 10 15210401 15210401 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004808 exon8 c.G953T p.R318I . . . NMT2 9397 broad.mit.edu 36 10 15223431 15223431 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004808 exon2 c.C242T p.S81L . . . ITGA8 8516 broad.mit.edu 36 10 15689684 15689684 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003638 exon17 c.C1762T p.R588X . . . CUBN 8029 broad.mit.edu 36 10 16997961 16997961 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon46 c.G7075T p.D2359Y . . . CUBN 8029 broad.mit.edu 36 10 17000763 17000763 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon45 c.G6864A p.S2288S . . . CUBN 8029 broad.mit.edu 36 10 17066282 17066282 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001081 exon30 c.C4353A p.I1451I . . . PLXDC2 84898 broad.mit.edu 36 10 20375934 20375934 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032812 exon3 c.C455T p.T152I . . . PLXDC2 84898 broad.mit.edu 36 10 20574338 20574338 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032812 exon13 c.C1371T p.I457I . . . PLXDC2 84898 broad.mit.edu 36 10 20608642 20608642 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032812 exon14 c.G1478A p.R493H . . . NEBL 10529 broad.mit.edu 36 10 21114784 21114784 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006393 exon28 c.C2943T p.I981I . . . NEBL 10529 broad.mit.edu 36 10 21290699 21290699 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_213569 exon4 c.G265A p.D89N . . . C10orf114 399726 broad.mit.edu 36 10 21824632 21824632 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010911 exon2 c.C314T p.A105V . . . ARMC3 219681 broad.mit.edu 36 10 23290996 23290996 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173081 exon7 c.A715C p.K239Q . . . KIAA1217 56243 broad.mit.edu 36 10 24802641 24802641 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019590 exon6 c.C1325T p.A442V . . . KIAA1217 56243 broad.mit.edu 36 10 24872009 24872009 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019590 exon19 c.C3804T p.F1268F . . . KIAA1217 56243 broad.mit.edu 36 10 24872973 24872973 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019590 exon19 c.C4768T p.R1590C . . . GPR158 57512 broad.mit.edu 36 10 25879974 25879974 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020752 exon6 c.C1468T p.L490F . . . GPR158 57512 broad.mit.edu 36 10 25925603 25925603 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020752 exon10 c.G2024A p.R675Q . . . MYO3A 53904 broad.mit.edu 36 10 26486401 26486401 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017433 exon26 c.C2950T p.R984X . . . MYO3A 53904 broad.mit.edu 36 10 26503046 26503046 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017433 exon30 c.A3847C p.K1283Q . . . APBB1IP 54518 broad.mit.edu 36 10 26840684 26840684 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019043 exon7 c.C534T p.L178L . . . APBB1IP 54518 broad.mit.edu 36 10 26865096 26865096 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019043 exon10 c.C988T p.R330C . . . ANKRD26 22852 broad.mit.edu 36 10 27334613 27334613 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014915 exon34 c.C5045A p.S1682Y . . . ANKRD26 22852 broad.mit.edu 36 10 27351500 27351500 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014915 exon29 c.A4208G p.K1403R . . . ANKRD26 22852 broad.mit.edu 36 10 27351582 27351582 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014915 exon29 c.G4126A p.E1376K . . . YME1L1 10730 broad.mit.edu 36 10 27451842 27451842 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014263 exon11 c.G1169T p.R390I . . . ARMC4 55130 broad.mit.edu 36 10 28312891 28312891 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018076 exon6 c.C706T p.R236X . . . KIAA1462 57608 broad.mit.edu 36 10 30356277 30356277 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020848 exon3 c.C2806T p.R936C . . . KIAA1462 57608 broad.mit.edu 36 10 30357427 30357427 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020848 exon3 c.C1656T p.C552C . . . KIAA1462 57608 broad.mit.edu 36 10 30358415 30358415 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020848 exon3 c.C668T p.S223F . . . ZNF438 220929 broad.mit.edu 36 10 31177719 31177719 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143771 exon7 c.C1591T p.R531C . . . ARHGAP12 94134 broad.mit.edu 36 10 32141708 32141708 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018287 exon15 c.A1884C p.K628N . . . ARHGAP12 94134 broad.mit.edu 36 10 32237514 32237514 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018287 exon3 c.G276A p.T92T . . . KIF5B 3799 broad.mit.edu 36 10 32363766 32363766 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004521 exon11 c.A969C p.K323N . . . ITGB1 3688 broad.mit.edu 36 10 33249288 33249288 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133376 exon10 c.G1160A p.G387D . . . ITGB1 3688 broad.mit.edu 36 10 33258862 33258862 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133376 exon4 c.G270T p.K90N . . . CCNY 219771 broad.mit.edu 36 10 35845554 35845554 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145012 exon4 c.A362C p.K121T . . . ZNF37A 7587 broad.mit.edu 36 10 38446342 38446342 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007094 exon8 c.G257T p.R86I . . . ZNF37A 7587 broad.mit.edu 36 10 38446704 38446704 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007094 exon8 c.G619T p.E207X . . . ZNF37A 7587 broad.mit.edu 36 10 38446890 38446890 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007094 exon8 c.A805C p.K269Q . . . FXYD4 53828 broad.mit.edu 36 10 43191182 43191183 + Missense_Mutation DNP AG CT CT novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001184963 exon7 c.206_207CT . . . . HNRNPF 3185 broad.mit.edu 36 10 43202949 43202949 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098208 exon3 c.C390A p.F130L . . . ZNF32 7580 broad.mit.edu 36 10 43460141 43460141 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006973 exon3 c.C185T p.S62L . . . OR13A1 79290 broad.mit.edu 36 10 45119436 45119436 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004297 exon4 c.G441A p.P147P . . . GDF10 2662 broad.mit.edu 36 10 48048737 48048737 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004962 exon2 c.C1155T p.F385F . . . FRMPD2 143162 broad.mit.edu 36 10 49122885 49122885 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018071 exon4 c.C323A p.S108Y . . . C10orf71 118461 broad.mit.edu 36 10 50201124 50201124 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135196 exon3 c.C528T p.F176F . . . ERCC6 2074 broad.mit.edu 36 10 50348854 50348854 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000124 exon18 c.G3158A p.R1053H . . . PGBD3 267004 broad.mit.edu 36 10 50394393 50394393 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170753 exon2 c.G774T p.M258I . . . CHAT 1103 broad.mit.edu 36 10 50505662 50505662 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142929 exon7 c.C582A p.F194L . . . NCOA4 8031 broad.mit.edu 36 10 51255592 51255592 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145261 exon9 c.G1733A p.R578Q . . . CSTF2T 23283 broad.mit.edu 36 10 53128337 53128337 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015235 exon1 c.C979T p.R327X . . . CSTF2T 23283 broad.mit.edu 36 10 53129047 53129047 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015235 exon1 c.A269G p.D90G . . . C10orf18 54906 broad.mit.edu 36 10 5831704 5831704 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017782 exon15 c.G6314A p.R2105Q . . . FAM13C 220965 broad.mit.edu 36 10 60699755 60699755 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143773 exon8 c.C464T p.S155L . . . ANK3 288 broad.mit.edu 36 10 61503930 61503930 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020987 exon37 c.C6715T p.R2239C . . . ANK3 288 broad.mit.edu 36 10 61616501 61616501 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020987 exon17 c.C2063T p.A688V . . . PFKFB3 5209 broad.mit.edu 36 10 6305976 6305976 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145443 exon12 c.G1203A p.T401T . . . PRKCQ 5588 broad.mit.edu 36 10 6597099 6597099 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006257 exon2 c.C5T p.S2L . . . CTNNA3 29119 broad.mit.edu 36 10 68196068 68196068 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013266 exon9 c.A1241G p.Y414C . . . LRRTM3 347731 broad.mit.edu 36 10 68527544 68527544 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178011 exon3 c.A1730C p.K577T . . . SIRT1 23411 broad.mit.edu 36 10 69342426 69342426 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142498 exon7 c.G662A p.R221Q . . . MYPN 84665 broad.mit.edu 36 10 69604266 69604266 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032578 exon11 c.G2411A p.G804E . . . DNA2 1763 broad.mit.edu 36 10 69846478 69846478 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080449 exon20 c.A3366C p.E1122D . . . DNA2 1763 broad.mit.edu 36 10 69848880 69848880 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080449 exon19 c.G3142A p.E1048K . . . DNA2 1763 broad.mit.edu 36 10 69872685 69872685 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080449 exon9 c.G1668A p.S556S . . . TET1 80312 broad.mit.edu 36 10 70075750 70075750 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030625 exon4 c.G3258A p.S1086S . . . TET1 80312 broad.mit.edu 36 10 70096810 70096810 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030625 exon7 c.T4464G p.V1488V . . . DDX50 79009 broad.mit.edu 36 10 70364583 70364583 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024045 exon10 c.G1424A p.R475H . . . KIAA1279 26128 broad.mit.edu 36 10 70445387 70445387 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015634 exon7 c.C1075T p.R359W . . . SRGN 5552 broad.mit.edu 36 10 70526938 70526938 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002727 exon2 c.G172A p.E58K . . . PPA1 5464 broad.mit.edu 36 10 71638991 71638991 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021129 exon8 c.A701G p.K234R . . . SGPL1 8879 broad.mit.edu 36 10 72289192 72289192 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003901 exon7 c.G545A p.R182H . . . SFMBT2 57713 broad.mit.edu 36 10 7245780 7245780 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029880 exon21 c.C2643T p.I881I . . . CDH23 64072 broad.mit.edu 36 10 73228995 73228995 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171933 exon4 c.C456T p.I152I . . . CDH23 64072 broad.mit.edu 36 10 73237150 73237150 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171933 exon11 c.C1569T p.I523I . . . ECD 11319 broad.mit.edu 36 10 74578081 74578081 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135753 exon7 c.G871A p.A291T . . . PPP3CB 5532 broad.mit.edu 36 10 74876296 74876296 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142353 exon11 c.C1231T p.R411X . . . MYOZ1 58529 broad.mit.edu 36 10 75064403 75064403 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021245 exon4 c.G347A p.S116N . . . ITIH2 3698 broad.mit.edu 36 10 7802896 7802896 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002216 exon7 c.C702T p.F234F . . . KCNMA1 3778 broad.mit.edu 36 10 78319218 78319218 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161353 exon27 c.A3407C p.K1136T . . . KCNMA1 3778 broad.mit.edu 36 10 78383647 78383647 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161353 exon20 c.A2228G p.N743S . . . KIN 22944 broad.mit.edu 36 10 7851299 7851299 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012311 exon8 c.T684C p.S228S . . . MAT1A 4143 broad.mit.edu 36 10 82024313 82024313 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000429 exon8 c.G1028A p.R343Q . . . MAT1A 4143 broad.mit.edu 36 10 82026249 82026249 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000429 exon6 c.G631A p.E211K . . . LRIT2 340745 broad.mit.edu 36 10 85975219 85975219 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017924 exon1 c.T38C p.V13A . . . PAPSS2 9060 broad.mit.edu 36 10 89491095 89491095 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001015880 exon10 c.G1210T p.E404X . . . PANK1 53354 broad.mit.edu 36 10 91343638 91343638 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148977 exon4 c.G1399A p.D467N . . . KIF20B 9585 broad.mit.edu 36 10 91476216 91476216 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016195 exon16 c.G2068A p.E690K . . . KIF20B 9585 broad.mit.edu 36 10 91487549 91487549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016195 exon20 c.G2851A p.E951K . . . HECTD2 143279 broad.mit.edu 36 10 93234330 93234330 + De_novo_Start_OutOfFrame SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182765 exon9 c.T908G p.F303C . . . HECTD2 143279 broad.mit.edu 36 10 93234980 93234980 + De_novo_Start_OutOfFrame SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182765 exon10 c.T1034G p.L345W . . . PPP1R3C 5507 broad.mit.edu 36 10 93379691 93379691 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005398 exon2 c.A927C p.R309S . . . BTAF1 9044 broad.mit.edu 36 10 93685402 93685402 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003972 exon2 c.G23A p.R8H . . . BTAF1 9044 broad.mit.edu 36 10 93757921 93757921 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003972 exon26 c.G3722A p.R1241Q . . . CPEB3 22849 broad.mit.edu 36 10 93942336 93942336 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014912 exon3 c.C1043T p.S348L . . . EXOC6 54536 broad.mit.edu 36 10 94659328 94659328 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001013848 exon6 c.G608A p.R203Q . . . EXOC6 54536 broad.mit.edu 36 10 94705335 94705335 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001013848 exon17 c.A1642C p.N548H . . . EXOC6 54536 broad.mit.edu 36 10 94747221 94747221 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013848 exon19 c.C1949T p.A650V . . . MYOF 26509 broad.mit.edu 36 10 95072885 95072885 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133337 exon47 c.A5357G p.D1786G . . . PDE6C 5146 broad.mit.edu 36 10 95412919 95412919 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006204 exon21 c.G2512A p.E838K . . . PLCE1 51196 broad.mit.edu 36 10 96056391 96056391 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165979 exon25 c.C4916T p.A1639V . . . NOC3L 64318 broad.mit.edu 36 10 96083951 96083951 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022451 exon21 c.G2376A p.T792T . . . TBC1D12 23232 broad.mit.edu 36 10 96243153 96243153 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015188 exon4 c.G1253A p.R418Q . . . TBC1D12 23232 broad.mit.edu 36 10 96246879 96246879 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015188 exon5 c.G1372A p.V458I . . . HELLS 3070 broad.mit.edu 36 10 96307901 96307901 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018063 exon4 c.G292T p.E98X . . . ALDH18A1 5832 broad.mit.edu 36 10 97387079 97387079 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017423 exon4 c.C408T p.S136S . . . ENTPD1 953 broad.mit.edu 36 10 97614573 97614573 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001776 exon9 c.G1291A p.A431T . . . C10orf12 26148 broad.mit.edu 36 10 98732596 98732596 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015652 exon1 c.G1459A p.E487K . . . SLIT1 6585 broad.mit.edu 36 10 98784263 98784263 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003061 exon23 c.C2393T p.S798F . . . SLIT1 6585 broad.mit.edu 36 10 98815777 98815777 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003061 exon5 c.C470T p.T157M . . . CRTAC1 55118 broad.mit.edu 36 10 99760888 99760888 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018058 exon2 c.C221T p.A74V . . . PGR 5241 broad.mit.edu 36 11 100418025 100418025 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000926 exon7 c.G2507A p.R836Q . . . KIAA1377 57562 broad.mit.edu 36 11 101298661 101298661 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020802 exon2 c.C208T p.R70X . . . KIAA1377 57562 broad.mit.edu 36 11 101338610 101338610 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020802 exon6 c.C1634T p.S545F . . . MMP7 4316 broad.mit.edu 36 11 101903570 101903570 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002423 exon3 c.C379T p.R127X . . . MMP8 4317 broad.mit.edu 36 11 102098540 102098540 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002424 exon2 c.C177T p.I59I . . . CASP5 838 broad.mit.edu 36 11 104383182 104383182 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136112 exon3 c.G310A p.D104N . . . KIAA1826 84437 broad.mit.edu 36 11 105385500 105385500 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032424 exon3 c.G1010A p.R337Q . . . KBTBD3 143879 broad.mit.edu 36 11 105429098 105429098 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152433 exon3 c.A1528G p.T510A . . . KBTBD3 143879 broad.mit.edu 36 11 105429420 105429420 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152433 exon3 c.C1206T p.L402L . . . ELMOD1 55531 broad.mit.edu 36 11 107006399 107006399 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130037 exon3 c.C64T p.R22C . . . ELMOD1 55531 broad.mit.edu 36 11 107006650 107006650 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130037 exon4 c.G178A p.D60N . . . CUL5 8065 broad.mit.edu 36 11 107428729 107428729 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003478 exon5 c.G544T p.E182X . . . CTR9 9646 broad.mit.edu 36 11 10746495 10746495 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014633 exon16 c.C1990T p.R664C . . . CTR9 9646 broad.mit.edu 36 11 10748728 10748728 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014633 exon18 c.C2345T p.A782V . . . NPAT 4863 broad.mit.edu 36 11 107548597 107548597 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002519 exon13 c.C2324T p.S775F . . . NPAT 4863 broad.mit.edu 36 11 107565095 107565095 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002519 exon6 c.G504A p.S168S . . . ATM 472 broad.mit.edu 36 11 107626833 107626833 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon10 c.G1431T p.K477N . . . ATM 472 broad.mit.edu 36 11 107677595 107677595 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon35 c.C5188T p.R1730X . . . ATM 472 broad.mit.edu 36 11 107693340 107693340 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon43 c.C6229A p.L2077I . . . EIF4G2 1982 broad.mit.edu 36 11 10780435 10780435 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001418 exon12 c.A1120C p.M374L . . . EXPH5 23086 broad.mit.edu 36 11 107888680 107888680 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015065 exon6 c.G2764T p.E922X . . . EXPH5 23086 broad.mit.edu 36 11 107890718 107890718 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015065 exon6 c.C726T p.F242F . . . ZC3H12C 85463 broad.mit.edu 36 11 109513087 109513087 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033390 exon2 c.A511G p.K171E . . . ARHGAP20 57569 broad.mit.edu 36 11 109956282 109956282 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020809 exon16 c.G2598T p.K866N . . . ARHGAP20 57569 broad.mit.edu 36 11 109962250 109962250 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020809 exon13 c.C1315T p.R439X . . . ARHGAP20 57569 broad.mit.edu 36 11 109966694 109966694 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020809 exon12 c.T1193C p.F398S . . . C11orf53 341032 broad.mit.edu 36 11 110661915 110661915 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198498 exon4 c.C637T p.H213Y . . . C11orf88 399949 broad.mit.edu 36 11 110891988 110891988 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100388 exon3 c.C282A p.I94I . . . LAYN 143903 broad.mit.edu 36 11 110919991 110919991 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178834 exon2 c.C219T p.I73I . . . FDXACB1 91893 broad.mit.edu 36 11 111251333 111251333 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138378 exon5 c.T1398C p.I466I . . . PIH1D2 120379 broad.mit.edu 36 11 111447680 111447680 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082619 exon3 c.A190C p.K64Q . . . NCAM1 4684 broad.mit.edu 36 11 112608209 112608209 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001076682 exon10 c.C1319T p.S440L . . . TTC12 54970 broad.mit.edu 36 11 112716639 112716639 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017868 exon11 c.C870A p.I290I . . . USP28 57646 broad.mit.edu 36 11 113203246 113203246 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020886 exon11 c.G1106T p.R369I . . . HTR3B 9177 broad.mit.edu 36 11 113318923 113318923 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006028 exon7 c.C706T p.R236C . . . HTR3A 3359 broad.mit.edu 36 11 113362057 113362057 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000869 exon6 c.C673T p.R225W . . . ZBTB16 7704 broad.mit.edu 36 11 113439578 113439578 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006006 exon2 c.G346A p.E116K . . . C11orf71 54494 broad.mit.edu 36 11 113776030 113776030 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019021 exon1 c.A234C p.P78P . . . RBM7 10179 broad.mit.edu 36 11 113783549 113783549 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016090 exon5 c.C611A p.S204Y . . . CADM1 23705 broad.mit.edu 36 11 114552485 114552485 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014333 exon10 c.C1248T p.D416D . . . BUD13 84811 broad.mit.edu 36 11 116136686 116136686 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032725 exon5 c.G1229A p.R410Q . . . SIK3 23387 broad.mit.edu 36 11 116303228 116303228 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025164 exon4 c.T359G p.F120C . . . BACE1 23621 broad.mit.edu 36 11 116665539 116665539 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138973 exon9 c.C1252T p.R418C . . . CD3E 916 broad.mit.edu 36 11 117688763 117688763 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000733 exon6 c.G324A p.A108A . . . CD3D 915 broad.mit.edu 36 11 117715140 117715140 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000732 exon5 c.C463T p.R155X . . . CD3G 917 broad.mit.edu 36 11 117725710 117725710 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000073 exon3 c.C122T p.S41L . . . UBE4A 9354 broad.mit.edu 36 11 117748502 117748502 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004788 exon6 c.G632A p.R211Q . . . PHLDB1 23187 broad.mit.edu 36 11 118015166 118015166 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144758 exon12 c.C2723T p.S908L . . . DDX6 1656 broad.mit.edu 36 11 118132235 118132235 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004397 exon11 c.G1118A p.R373Q . . . ABCG4 64137 broad.mit.edu 36 11 118532812 118532812 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142505 exon9 c.G946A p.E316K . . . USP2 9099 broad.mit.edu 36 11 118749114 118749114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004205 exon2 c.C287T p.T96I . . . ARHGEF12 23365 broad.mit.edu 36 11 119835149 119835149 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198665 exon25 c.T2380C p.F794L . . . GRIK4 2900 broad.mit.edu 36 11 120207896 120207896 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014619 exon5 c.G637A p.A213T . . . GRIK4 2900 broad.mit.edu 36 11 120251065 120251065 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014619 exon9 c.T1067C p.L356S . . . TECTA 7007 broad.mit.edu 36 11 120485216 120485216 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005422 exon3 c.C285T p.F95F . . . TECTA 7007 broad.mit.edu 36 11 120503858 120503858 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005422 exon8 c.C1962T p.F654F . . . TECTA 7007 broad.mit.edu 36 11 120542647 120542647 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005422 exon17 c.T5534C p.F1845S . . . SC5DL 6309 broad.mit.edu 36 11 120683236 120683236 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006918 exon5 c.C705A p.F235L . . . CRTAM 56253 broad.mit.edu 36 11 122229917 122229917 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019604 exon4 c.G403T p.E135X . . . MICALCL 84953 broad.mit.edu 36 11 12272764 12272764 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032867 exon3 c.G1210T p.D404Y . . . GRAMD1B 57476 broad.mit.edu 36 11 122982663 122982663 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020716 exon10 c.A1031G p.D344G . . . OR6X1 390260 broad.mit.edu 36 11 123129576 123129576 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005188 exon1 c.T861G p.I287M . . . OR6T1 219874 broad.mit.edu 36 11 123318892 123318892 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005187 exon1 c.C864T p.F288F . . . OR6T1 219874 broad.mit.edu 36 11 123319507 123319507 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005187 exon1 c.C249T p.V83V . . . OR10S1 219873 broad.mit.edu 36 11 123353006 123353006 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004474 exon1 c.C603T p.L201L . . . OR10G4 390264 broad.mit.edu 36 11 123391589 123391589 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004462 exon1 c.A98G p.Y33C . . . CCDC15 80071 broad.mit.edu 36 11 124362436 124362436 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025004 exon8 c.G1104A p.Q368Q . . . FEZ1 9638 broad.mit.edu 36 11 124823623 124823623 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005103 exon9 c.G1147A p.D383N . . . FEZ1 9638 broad.mit.edu 36 11 124835761 124835761 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005103 exon5 c.G510T p.E170D . . . STT3A 3703 broad.mit.edu 36 11 124980787 124980787 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_152713 exon7 c.A562C p.K188Q . . . CDON 50937 broad.mit.edu 36 11 125359068 125359068 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016952 exon16 c.C2904T p.I968I . . . CDON 50937 broad.mit.edu 36 11 125370104 125370104 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016952 exon13 c.C2416T p.R806W . . . FLI1 2313 broad.mit.edu 36 11 128147963 128147963 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167681 exon4 c.C363T p.I121I . . . ARHGAP32 9743 broad.mit.edu 36 11 128347812 128347812 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014715 exon12 c.G2710A p.E904K . . . ARNTL 406 broad.mit.edu 36 11 13332541 13332541 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030272 exon4 c.G110A p.R37H . . . JAM3 83700 broad.mit.edu 36 11 133519379 133519379 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032801 exon4 c.A425G p.K142R . . . NCAPD3 23310 broad.mit.edu 36 11 133544156 133544156 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015261 exon25 c.C3105T p.F1035F . . . GLB1L3 112937 broad.mit.edu 36 11 133656483 133656483 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080407 exon4 c.A365G p.Y122C . . . SPON1 10418 broad.mit.edu 36 11 14238781 14238781 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006108 exon14 c.C1902T p.C634C . . . SPON1 10418 broad.mit.edu 36 11 14240908 14240908 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006108 exon15 c.C2070T p.F690F . . . CYP2R1 120227 broad.mit.edu 36 11 14863955 14863955 + Missense_Mutation SNP C T T rs61744571 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024514 exon2 c.G310A p.E104K . . . RPS13 6207 broad.mit.edu 36 11 17055331 17055331 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017 exon3 c.T111G p.I37M . . . KCNC1 3746 broad.mit.edu 36 11 17714263 17714263 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004976 exon1 c.C138T p.F46F . . . SAA4 6291 broad.mit.edu 36 11 18209632 18209632 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006512 exon4 c.A386C p.K129T . . . TMEM86A 144110 broad.mit.edu 36 11 18679787 18679787 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153347 exon3 c.G378A p.A126A . . . MRGPRX1 259249 broad.mit.edu 36 11 18912744 18912744 + Missense_Mutation SNP C T T rs55954376 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147199 exon1 c.G164A p.R55H . . . MRGPRX1 259249 broad.mit.edu 36 11 18912877 18912877 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147199 exon1 c.G31T p.E11X . . . DBX1 120237 broad.mit.edu 36 11 20137356 20137356 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029865 exon2 c.C426T p.F142F . . . GAS2 2620 broad.mit.edu 36 11 22653084 22653084 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143830 exon2 c.T93G p.A31A . . . LUZP2 338645 broad.mit.edu 36 11 24707355 24707355 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001009909 exon2 c.C127T p.R43C . . . CCDC34 91057 broad.mit.edu 36 11 27328420 27328420 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080654 exon3 c.C641A p.S214Y . . . KIF18A 81930 broad.mit.edu 36 11 28076022 28076022 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031217 exon2 c.C49T p.R17C . . . KCNA4 3739 broad.mit.edu 36 11 29990537 29990537 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002233 exon2 c.C265T p.R89W . . . DCDC1 341019 broad.mit.edu 36 11 31306334 31306334 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181807 exon3 c.G70A p.A24T . . . EIF3M 10480 broad.mit.edu 36 11 32572038 32572038 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006360 exon6 c.A584G p.D195G . . . CCDC73 493860 broad.mit.edu 36 11 32592193 32592193 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008391 exon16 c.T2247C p.C749C . . . DEPDC7 91614 broad.mit.edu 36 11 33011402 33011402 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139160 exon9 c.G1334T p.R445I . . . ZNF195 7748 broad.mit.edu 36 11 3337610 3337610 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007152 exon4 c.A988G p.R330G . . . C11orf41 25758 broad.mit.edu 36 11 33523386 33523386 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012194 exon2 c.C2380T p.R794X . . . SLC1A2 6506 broad.mit.edu 36 11 35295501 35295501 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004171 exon2 c.T156C p.F52F . . . PAMR1 25891 broad.mit.edu 36 11 35410540 35410540 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001991 exon11 c.C2103T p.L701L . . . PAMR1 25891 broad.mit.edu 36 11 35410659 35410659 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001991 exon11 c.A1984G p.T662A . . . RAG1 5896 broad.mit.edu 36 11 36554120 36554120 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000448 exon2 c.G2690A p.R897Q . . . TRIM21 6737 broad.mit.edu 36 11 4368147 4368147 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003141 exon2 c.C69T p.F23F . . . ACCS 84680 broad.mit.edu 36 11 44061433 44061433 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032592 exon13 c.G1250T p.R417I . . . OR52K2 119774 broad.mit.edu 36 11 4427419 4427419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005172 exon1 c.C274T p.R92W . . . OR52K2 119774 broad.mit.edu 36 11 4427611 4427611 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005172 exon1 c.A466G p.T156A . . . TSPAN18 90139 broad.mit.edu 36 11 44884597 44884597 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130783 exon3 c.C54A p.F18L . . . ZNF408 79797 broad.mit.edu 36 11 46683171 46683171 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024741 exon5 c.C1345T p.R449W . . . CKAP5 9793 broad.mit.edu 36 11 46789177 46789177 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008938 exon5 c.C586T p.R196W . . . LRP4 4038 broad.mit.edu 36 11 46868613 46868613 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002334 exon14 c.A1706C p.Y569S . . . AGBL2 79841 broad.mit.edu 36 11 47641160 47641160 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024783 exon17 c.A2529C p.R843S . . . OR52R1 119695 broad.mit.edu 36 11 4781414 4781414 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005177 exon1 c.C773G p.A258G . . . OR52R1 119695 broad.mit.edu 36 11 4781758 4781758 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005177 exon1 c.C429T p.V143V . . . OR52R1 119695 broad.mit.edu 36 11 4782095 4782095 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005177 exon1 c.C92T p.A31V . . . OR4X2 119764 broad.mit.edu 36 11 48223919 48223919 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004727 exon1 c.T688C p.S230P . . . OR4X1 390113 broad.mit.edu 36 11 48242065 48242065 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004726 exon1 c.C77A p.S26Y . . . OR51S1 119692 broad.mit.edu 36 11 4826649 4826649 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004758 exon1 c.C366A p.V122V . . . OR4S1 256148 broad.mit.edu 36 11 48285205 48285205 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004725 exon1 c.T855C p.Y285Y . . . FOLH1 2346 broad.mit.edu 36 11 49132554 49132554 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193471 exon17 c.A1645C p.K549Q . . . OR52J3 119679 broad.mit.edu 36 11 5024783 5024783 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001916 exon1 c.T452C p.V151A . . . OR4A5 81318 broad.mit.edu 36 11 51268524 51268524 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005272 exon1 c.G448A p.G150S . . . OR52A1 23538 broad.mit.edu 36 11 5129502 5129502 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012375 exon1 c.T674G p.F225C . . . OR52A1 23538 broad.mit.edu 36 11 5130150 5130150 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012375 exon1 c.A26G p.Y9C . . . OR4C46 119749 broad.mit.edu 36 11 51372053 51372053 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004703 exon1 c.T196G p.F66V . . . HBE1 3046 broad.mit.edu 36 11 5247348 5247348 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005330 exon2 c.T227C p.I76T . . . OR51B2 79345 broad.mit.edu 36 11 5301982 5301982 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033180 exon1 c.G122A p.G41D . . . OR51B5 282763 broad.mit.edu 36 11 5321089 5321089 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005567 exon1 c.G242A p.G81E . . . OR51I2 390064 broad.mit.edu 36 11 5431625 5431625 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004754 exon1 c.G331T p.E111X . . . OR51I2 390064 broad.mit.edu 36 11 5431772 5431772 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004754 exon1 c.C478T p.P160S . . . OR4A15 81328 broad.mit.edu 36 11 54892383 54892383 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005275 exon1 c.C448T p.R150X . . . OR4C15 81309 broad.mit.edu 36 11 55078835 55078835 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001920 exon1 c.C477A p.F159L . . . OR4P4 81300 broad.mit.edu 36 11 55162551 55162551 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004124 exon1 c.A142G p.T48A . . . OR4S2 219431 broad.mit.edu 36 11 55175716 55175716 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004059 exon1 c.T761G p.F254C . . . OR52H1 390067 broad.mit.edu 36 11 5522405 5522405 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005289 exon1 c.G925A p.D309N . . . OR5D13 390142 broad.mit.edu 36 11 55298338 55298338 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001967 exon1 c.G849A p.A283A . . . OR5D14 219436 broad.mit.edu 36 11 55319875 55319875 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004735 exon1 c.G268T p.A90S . . . OR5D14 219436 broad.mit.edu 36 11 55320210 55320210 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004735 exon1 c.T603G p.L201L . . . OR5I1 10798 broad.mit.edu 36 11 55460303 55460303 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006637 exon1 c.G150A p.L50L . . . OR5I1 10798 broad.mit.edu 36 11 55460437 55460437 + Silent SNP T G G rs17597625 byCluster;byFrequency;byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006637 exon1 c.A16C p.R6R . . . OR5F1 338674 broad.mit.edu 36 11 55517925 55517925 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003697 exon1 c.C753A p.F251L . . . OR5F1 338674 broad.mit.edu 36 11 55518092 55518092 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003697 exon1 c.G586T p.E196X . . . OR5F1 338674 broad.mit.edu 36 11 55518174 55518174 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003697 exon1 c.C504A p.F168L . . . OR5F1 338674 broad.mit.edu 36 11 55518354 55518354 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003697 exon1 c.G324A p.A108A . . . OR5AS1 219447 broad.mit.edu 36 11 55555401 55555401 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001921 exon1 c.T931C p.S311P . . . OR8K5 219453 broad.mit.edu 36 11 55683690 55683690 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004058 exon1 c.A680G p.Q227R . . . OR5T1 390155 broad.mit.edu 36 11 55800068 55800068 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004745 exon1 c.C378A p.L126L . . . OR8H1 219469 broad.mit.edu 36 11 55814749 55814749 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005199 exon1 c.C366T p.Y122Y . . . TRIM6-TRIM34 445372 broad.mit.edu 36 11 5583288 5583288 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003818 exon4 c.A749G p.D250G . . . OR5R1 219479 broad.mit.edu 36 11 55942069 55942069 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004744 exon1 c.T216C p.C72C . . . OR5M8 219484 broad.mit.edu 36 11 56014781 56014781 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005282 exon1 c.T642C p.C214C . . . OR5AP2 338675 broad.mit.edu 36 11 56166058 56166058 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002925 exon1 c.G434T p.R145I . . . OR5AR1 219493 broad.mit.edu 36 11 56188268 56188268 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004730 exon1 c.C531A p.F177L . . . OR9G4 283189 broad.mit.edu 36 11 56267233 56267233 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005284 exon1 c.G631A p.E211K . . . TRIM22 10346 broad.mit.edu 36 11 5687374 5687374 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199573 exon8 c.C1405T p.R469C . . . SERPING1 710 broad.mit.edu 36 11 57124342 57124342 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000062 exon3 c.G466A p.A156T . . . OR52N1 79473 broad.mit.edu 36 11 5765692 5765692 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001913 exon1 c.C931A p.L311I . . . CNTF 1270 broad.mit.edu 36 11 58146883 58146883 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000614 exon1 c.C82T p.R28C . . . GLYAT 10249 broad.mit.edu 36 11 58233825 58233825 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201648 exon6 c.T881C p.V294A . . . FAM111B 374393 broad.mit.edu 36 11 58649355 58649355 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142703 exon3 c.G1119A p.P373P . . . FAM111B 374393 broad.mit.edu 36 11 58650059 58650059 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142703 exon3 c.C1823T p.T608M . . . OR4D10 390197 broad.mit.edu 36 11 59001825 59001825 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004705 exon1 c.C347T p.S116L . . . OSBP 5007 broad.mit.edu 36 11 59124873 59124873 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002556 exon6 c.G1174A p.E392K . . . OR56A3 390083 broad.mit.edu 36 11 5925835 5925835 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003443 exon1 c.C683T p.A228V . . . OR52L1 338751 broad.mit.edu 36 11 5964251 5964251 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005173 exon1 c.C486T p.I162I . . . MS4A1 931 broad.mit.edu 36 11 59991090 59991090 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021950 exon6 c.C656T p.T219M . . . ZP1 22917 broad.mit.edu 36 11 60397222 60397222 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207341 exon7 c.G1124A p.R375H . . . TMEM132A 54972 broad.mit.edu 36 11 60456095 60456095 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_017870 exon7 c.G1279C p.V427L . . . VPS37C 55048 broad.mit.edu 36 11 60662858 60662858 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017966 exon2 c.A20C p.K7T . . . OR52B2 255725 broad.mit.edu 36 11 6147675 6147675 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004052 exon1 c.G458A p.R153Q . . . INCENP 3619 broad.mit.edu 36 11 61653940 61653940 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040694 exon4 c.G365A p.R122Q . . . FAM160A2 84067 broad.mit.edu 36 11 6201984 6201984 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032127 exon3 c.G209A p.R70H . . . AHNAK 79026 broad.mit.edu 36 11 62043789 62043789 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.C14676T p.F4892F . . . AHNAK 79026 broad.mit.edu 36 11 62050666 62050666 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.C7799A p.S2600Y . . . CNGA4 1262 broad.mit.edu 36 11 6217209 6217209 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037329 exon2 c.G82A p.D28N . . . NXF1 10482 broad.mit.edu 36 11 62320614 62320614 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006362 exon14 c.T1180C p.Y394H . . . STX5 6811 broad.mit.edu 36 11 62331672 62331672 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003164 exon11 c.G913A p.D305N . . . WDR74 54663 broad.mit.edu 36 11 62360027 62360027 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018093 exon5 c.G351T p.K117N . . . CCKBR 887 broad.mit.edu 36 11 6248006 6248006 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176875 exon3 c.T516G p.A172A . . . SLC22A25 387601 broad.mit.edu 36 11 62688007 62688007 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199352 exon9 c.C1509A p.V503V . . . SLC22A25 387601 broad.mit.edu 36 11 62741426 62741426 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199352 exon4 c.C766T p.R256X . . . PRKCDBP 112464 broad.mit.edu 36 11 6297075 6297075 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145040 exon2 c.C680T p.A227V . . . SMPD1 6609 broad.mit.edu 36 11 6371729 6371729 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007593 exon5 c.C1365T p.F455F . . . SMPD1 6609 broad.mit.edu 36 11 6372238 6372238 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007593 exon6 c.T1718G p.F573C . . . APBB1 322 broad.mit.edu 36 11 6381305 6381305 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164 exon4 c.G943T p.E315X . . . SLC22A12 116085 broad.mit.edu 36 11 64116835 64116835 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144585 exon2 c.C411T p.L137L . . . NRXN2 9379 broad.mit.edu 36 11 64191337 64191337 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015080 exon9 c.G1759A p.E587K . . . NAALADL1 10004 broad.mit.edu 36 11 64581515 64581515 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005468 exon4 c.C507T p.G169G . . . ZNHIT2 741 broad.mit.edu 36 11 64640518 64640518 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014205 exon1 c.G1184T p.R395I . . . SF3B2 10992 broad.mit.edu 36 11 65585744 65585744 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006842 exon15 c.C1791T p.F597F . . . SF3B2 10992 broad.mit.edu 36 11 65585988 65585988 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006842 exon16 c.A1920G p.G640G . . . NPAS4 266743 broad.mit.edu 36 11 65946805 65946805 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178864 exon4 c.G515A p.R172Q . . . BBS1 582 broad.mit.edu 36 11 66054955 66054955 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024649 exon15 c.C1488T p.G496G . . . SPTBN2 6712 broad.mit.edu 36 11 66210480 66210480 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006946 exon36 c.G6904A p.D2302N . . . SSH3 54961 broad.mit.edu 36 11 66831974 66831974 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017857 exon8 c.C873A p.V291V . . . OR6A2 8590 broad.mit.edu 36 11 6773137 6773137 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003696 exon1 c.C379T p.R127C . . . PPP6R3 55291 broad.mit.edu 36 11 68061931 68061931 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164164 exon4 c.T223C p.Y75H . . . MTL5 9633 broad.mit.edu 36 11 68266385 68266385 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039656 exon5 c.A805C p.K269Q . . . OR2D2 120776 broad.mit.edu 36 11 6869496 6869496 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003700 exon1 c.C812T p.S271L . . . OR2D2 120776 broad.mit.edu 36 11 6870302 6870302 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003700 exon1 c.A6G p.R2R . . . ZNF215 7762 broad.mit.edu 36 11 6933609 6933609 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013250 exon7 c.G825A p.R275R . . . NLRP14 338323 broad.mit.edu 36 11 7016420 7016420 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176822 exon2 c.C27A p.F9L . . . NUMA1 4926 broad.mit.edu 36 11 71407133 71407133 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006185 exon11 c.C817T p.L273L . . . ARHGEF17 9828 broad.mit.edu 36 11 72744267 72744267 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014786 exon4 c.C3495T p.I1165I . . . PAAF1 80227 broad.mit.edu 36 11 73276114 73276114 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025155 exon3 c.A156C p.T52T . . . DNAJB13 374407 broad.mit.edu 36 11 73348323 73348323 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153614 exon3 c.C309A p.F103L . . . XRRA1 143570 broad.mit.edu 36 11 74240719 74240719 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182969 exon13 c.C1203T p.F401F . . . SERPINH1 871 broad.mit.edu 36 11 74957745 74957745 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001235 exon4 c.G835A p.E279K . . . C11orf30 56946 broad.mit.edu 36 11 75835683 75835683 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020193 exon2 c.G53T p.R18I . . . C11orf30 56946 broad.mit.edu 36 11 75934772 75934772 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020193 exon20 c.C3557A p.S1186X . . . CAPN5 726 broad.mit.edu 36 11 76503048 76503048 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004055 exon5 c.G619A p.D207N . . . GDPD4 220032 broad.mit.edu 36 11 76617850 76617850 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182833 exon14 c.T1465G p.F489V . . . GDPD4 220032 broad.mit.edu 36 11 76660006 76660006 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182833 exon5 c.A288G p.V96V . . . OVCH2 341277 broad.mit.edu 36 11 7673450 7673450 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198185 exon12 c.C1209T p.F403F . . . KCTD21 283219 broad.mit.edu 36 11 77563171 77563171 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029859 exon2 c.C78T p.D26D . . . NARS2 79731 broad.mit.edu 36 11 77825495 77825495 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024678 exon14 c.C1303T p.R435C . . . ODZ4 26011 broad.mit.edu 36 11 78059065 78059065 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098816 exon32 c.C5973T p.D1991D . . . OR10A6 390093 broad.mit.edu 36 11 7906076 7906076 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004461 exon1 c.C710T p.A237V . . . OR10A6 390093 broad.mit.edu 36 11 7906725 7906725 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004461 exon1 c.C61T p.P21S . . . OR10A3 26496 broad.mit.edu 36 11 7917366 7917366 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003745 exon1 c.C278A p.S93Y . . . C11orf82 220042 broad.mit.edu 36 11 82303450 82303450 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145018 exon3 c.C22A p.L8I . . . PCF11 51585 broad.mit.edu 36 11 82557323 82557323 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015885 exon8 c.G2298A p.T766T . . . DLG2 1740 broad.mit.edu 36 11 83222454 83222454 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142700 exon9 c.C949T p.R317C . . . DLG2 1740 broad.mit.edu 36 11 83369270 83369270 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142700 exon5 c.A515T p.Y172F . . . SYTL2 54843 broad.mit.edu 36 11 85115069 85115069 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206927 exon1 c.A79G p.N27D . . . PRSS23 11098 broad.mit.edu 36 11 86197211 86197211 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007173 exon2 c.G878A p.R293H . . . ST5 6764 broad.mit.edu 36 11 8673655 8673655 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005418 exon22 c.G3310A p.V1104M . . . CTSC 1075 broad.mit.edu 36 11 87685364 87685364 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001814 exon3 c.G325T p.E109X . . . NOX4 50507 broad.mit.edu 36 11 88710273 88710273 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016931 exon16 c.A1505T p.D502V . . . FOLH1B 219595 broad.mit.edu 36 11 89048954 89048954 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153696 exon7 c.G418A p.A140T . . . FOLH1B 219595 broad.mit.edu 36 11 89071349 89071349 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153696 exon14 c.G1263T p.K421N . . . NAALAD2 10003 broad.mit.edu 36 11 89507579 89507579 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005467 exon1 c.C5T p.A2V . . . CHORDC1 26973 broad.mit.edu 36 11 89584046 89584046 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012124 exon5 c.G418T p.E140X . . . SCUBE2 57758 broad.mit.edu 36 11 9003922 9003922 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020974 exon20 c.C2586T p.I862I . . . SCUBE2 57758 broad.mit.edu 36 11 9005554 9005554 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020974 exon19 c.C2463T p.I821I . . . FAT3 120114 broad.mit.edu 36 11 91726070 91726070 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon1 c.G1144A p.D382N . . . FAT3 120114 broad.mit.edu 36 11 91726443 91726443 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon1 c.A1517G p.Y506C . . . FAT3 120114 broad.mit.edu 36 11 91727067 91727067 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon1 c.A2141G p.D714G . . . FAT3 120114 broad.mit.edu 36 11 91727245 91727245 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon1 c.C2319A p.C773X . . . FAT3 120114 broad.mit.edu 36 11 92162949 92162949 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon7 c.C4528T p.R1510W . . . FAT3 120114 broad.mit.edu 36 11 92173750 92173750 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon9 c.C7923T p.S2641S . . . FAT3 120114 broad.mit.edu 36 11 92216846 92216846 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon18 c.A10665G p.E3555E . . . FAT3 120114 broad.mit.edu 36 11 92216956 92216956 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon18 c.A10775G p.Q3592R . . . FAT3 120114 broad.mit.edu 36 11 92232119 92232119 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon20 c.C11641T p.P3881S . . . FAT3 120114 broad.mit.edu 36 11 92256114 92256114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon23 c.G12844A p.V4282M . . . MTNR1B 4544 broad.mit.edu 36 11 92354491 92354491 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005959 exon2 c.T454C p.Y152H . . . MTNR1B 4544 broad.mit.edu 36 11 92355004 92355004 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005959 exon2 c.C967A p.L323I . . . TAF1D 79101 broad.mit.edu 36 11 93111013 93111013 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024116 exon3 c.G369T p.K123N . . . HEPHL1 341208 broad.mit.edu 36 11 93418523 93418523 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098672 exon2 c.G207A p.R69R . . . FOLR4 390243 broad.mit.edu 36 11 93680091 93680091 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199206 exon3 c.G461A p.R154H . . . MRE11A 4361 broad.mit.edu 36 11 93818642 93818642 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005591 exon16 c.A1849C p.N617H . . . MRE11A 4361 broad.mit.edu 36 11 93858823 93858823 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005591 exon4 c.G229A p.E77K . . . MRE11A 4361 broad.mit.edu 36 11 93863649 93863649 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005591 exon3 c.G151A p.E51K . . . PIWIL4 143689 broad.mit.edu 36 11 93956305 93956305 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152431 exon5 c.A557C p.K186T . . . PIWIL4 143689 broad.mit.edu 36 11 93974649 93974649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152431 exon12 c.G1421A p.R474Q . . . IPO7 10527 broad.mit.edu 36 11 9407256 9407256 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006391 exon14 c.G1528T p.E510X . . . AMOTL1 154810 broad.mit.edu 36 11 94204310 94204310 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130847 exon6 c.G1603A p.E535K . . . AMOTL1 154810 broad.mit.edu 36 11 94232440 94232440 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130847 exon9 c.G2047A p.D683N . . . SESN3 143686 broad.mit.edu 36 11 94557277 94557277 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144665 exon6 c.C892A p.L298I . . . SESN3 143686 broad.mit.edu 36 11 94558286 94558286 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144665 exon5 c.G544T p.E182X . . . CEP57 9702 broad.mit.edu 36 11 95172149 95172149 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014679 exon2 c.C151T p.R51X . . . MTMR2 8898 broad.mit.edu 36 11 95208239 95208239 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201278 exon17 c.G1579T p.E527X . . . MAML2 84441 broad.mit.edu 36 11 95466310 95466310 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032427 exon2 c.G533T p.R178I . . . SWAP70 23075 broad.mit.edu 36 11 9707555 9707555 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015055 exon6 c.G879T p.K293N . . . UTP20 27340 broad.mit.edu 36 12 100262626 100262626 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon36 c.G4572T p.E1524D . . . UTP20 27340 broad.mit.edu 36 12 100274910 100274910 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon43 c.G5610A p.A1870A . . . UTP20 27340 broad.mit.edu 36 12 100279887 100279887 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon44 c.T5708G p.F1903C . . . UTP20 27340 broad.mit.edu 36 12 100293566 100293566 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon56 c.C7297T p.R2433C . . . UTP20 27340 broad.mit.edu 36 12 100301175 100301175 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon59 c.C7882T p.R2628W . . . SPIC 121599 broad.mit.edu 36 12 100404566 100404566 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152323 exon5 c.C633A p.I211I . . . GNPTAB 79158 broad.mit.edu 36 12 100679177 100679177 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024312 exon15 c.T2994G p.F998L . . . ERC1 23085 broad.mit.edu 36 12 1007842 1007842 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178039 exon2 c.A512G p.D171G . . . C12orf48 55010 broad.mit.edu 36 12 101066299 101066299 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017915 exon3 c.A315C p.L105F . . . TDG 6996 broad.mit.edu 36 12 102904879 102904879 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003211 exon10 c.G1114A p.E372K . . . TXNRD1 7296 broad.mit.edu 36 12 103237460 103237460 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182743 exon6 c.G506A p.G169D . . . CHST11 50515 broad.mit.edu 36 12 103675680 103675680 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173982 exon3 c.A1013G p.Y338C . . . KLRK1 22914 broad.mit.edu 36 12 10430829 10430829 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199805 exon8 c.T88G p.F30V . . . KLRC4 8302 broad.mit.edu 36 12 10451565 10451565 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013431 exon4 c.G431T p.R144I . . . KLRC1 3821 broad.mit.edu 36 12 10493145 10493145 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213658 exon6 c.G447A p.S149S . . . NUAK1 9891 broad.mit.edu 36 12 104988726 104988726 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014840 exon6 c.G788A p.R263Q . . . PWP1 11137 broad.mit.edu 36 12 106622566 106622566 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007062 exon11 c.G989A p.R330Q . . . ISCU 23479 broad.mit.edu 36 12 107485130 107485130 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213595 exon4 c.C374T p.S125L . . . KCTD10 83892 broad.mit.edu 36 12 108380192 108380192 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031954 exon4 c.G462A p.A154A . . . KCTD10 83892 broad.mit.edu 36 12 108382937 108382937 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031954 exon3 c.C274T p.R92X . . . TAS2R9 50835 broad.mit.edu 36 12 10853345 10853345 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_023917 exon1 c.C597A p.F199L . . . TAS2R9 50835 broad.mit.edu 36 12 10853705 10853705 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023917 exon1 c.C237T p.S79S . . . TRPV4 59341 broad.mit.edu 36 12 108725198 108725198 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021625 exon4 c.C693A p.F231L . . . GIT2 9815 broad.mit.edu 36 12 108869667 108869667 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135214 exon15 c.C1418T p.S473L . . . ATP2A2 488 broad.mit.edu 36 12 109218811 109218811 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170665 exon5 c.G349A p.E117K . . . ATP2A2 488 broad.mit.edu 36 12 109262940 109262940 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170665 exon14 c.C1855T p.R619W . . . PPP1CC 5501 broad.mit.edu 36 12 109652787 109652787 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002710 exon3 c.G348T p.E116D . . . PRH2 5555 broad.mit.edu 36 12 10974146 10974146 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005042 exon2 c.G76T p.E26X . . . TAS2R14 50840 broad.mit.edu 36 12 10982897 10982897 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023922 exon1 c.T177G p.V59V . . . CUX2 23316 broad.mit.edu 36 12 110136467 110136467 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015267 exon2 c.C144T p.L48L . . . TAS2R50 259296 broad.mit.edu 36 12 11029905 11029905 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176890 exon1 c.C822T p.F274F . . . TAS2R50 259296 broad.mit.edu 36 12 11029984 11029984 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176890 exon1 c.C743T p.S248L . . . TMEM116 89894 broad.mit.edu 36 12 110856176 110856176 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138341 exon8 c.G354T p.V118V . . . NAA25 80018 broad.mit.edu 36 12 110964246 110964246 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024953 exon20 c.C2420A p.S807Y . . . RPL6 6128 broad.mit.edu 36 12 111328176 111328176 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024662 exon6 c.T578G p.F193C . . . RPH3A 22895 broad.mit.edu 36 12 111801336 111801336 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014954 exon13 c.C1189T p.L397F . . . OAS3 4940 broad.mit.edu 36 12 111883350 111883350 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006187 exon8 c.C1749T p.F583F . . . RBM19 9904 broad.mit.edu 36 12 112881448 112881448 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016196 exon5 c.G523A p.D175N . . . MED13L 23389 broad.mit.edu 36 12 114930910 114930910 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015335 exon10 c.G1691A p.R564Q . . . NOS1 4842 broad.mit.edu 36 12 116233687 116233687 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000620 exon3 c.C819T p.V273V . . . TAOK3 51347 broad.mit.edu 36 12 117121409 117121409 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016281 exon13 c.G1024T p.D342Y . . . CIT 11113 broad.mit.edu 36 12 118656392 118656392 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007174 exon25 c.C3184T p.R1062X . . . GCN1L1 10985 broad.mit.edu 36 12 119086632 119086632 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006836 exon18 c.T1739C p.V580A . . . GCN1L1 10985 broad.mit.edu 36 12 119086838 119086838 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006836 exon17 c.A1683C p.K561N . . . SIRT4 23409 broad.mit.edu 36 12 119234691 119234691 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012240 exon3 c.G547T p.E183X . . . PLA2G1B 5319 broad.mit.edu 36 12 119249920 119249920 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000928 exon1 c.C20T p.A7V . . . POP5 51367 broad.mit.edu 36 12 119501714 119501714 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015918 exon4 c.A383C p.N128T . . . POP5 51367 broad.mit.edu 36 12 119501780 119501780 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015918 exon4 c.C317T p.T106I . . . SPPL3 121665 broad.mit.edu 36 12 119689631 119689631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139015 exon9 c.C922T p.R308C . . . WDR66 144406 broad.mit.edu 36 12 120922198 120922198 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144668 exon20 c.G3200A p.R1067Q . . . CLIP1 6249 broad.mit.edu 36 12 121427977 121427977 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198240 exon3 c.A569C p.K190T . . . KNTC1 9735 broad.mit.edu 36 12 121641224 121641224 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014708 exon41 c.G4117A p.D1373N . . . LRP6 4040 broad.mit.edu 36 12 12208502 12208502 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002336 exon9 c.G2024A p.R675Q . . . DNAH10 196385 broad.mit.edu 36 12 122840475 122840475 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon11 c.A1486G p.T496A . . . LRP6 4040 broad.mit.edu 36 12 12288605 12288605 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002336 exon2 c.G307T p.D103Y . . . CCDC92 80212 broad.mit.edu 36 12 122987882 122987882 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025140 exon5 c.C672T p.F224F . . . TMEM132B 114795 broad.mit.edu 36 12 124694624 124694624 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052907 exon6 c.G1472A p.S491N . . . TMEM132D 121256 broad.mit.edu 36 12 128124645 128124645 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133448 exon9 c.A3028C p.K1010Q . . . TMEM132D 121256 broad.mit.edu 36 12 128124930 128124930 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133448 exon9 c.G2743A p.D915N . . . RIMBP2 23504 broad.mit.edu 36 12 129464634 129464634 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015347 exon14 c.C2641A p.Q881K . . . GPR133 283383 broad.mit.edu 36 12 130127355 130127355 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198827 exon14 c.C1530T p.C510C . . . EP400 57634 broad.mit.edu 36 12 131113017 131113017 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015409 exon47 c.C8149A p.L2717I . . . KIAA1467 57613 broad.mit.edu 36 12 13124166 13124166 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020853 exon12 c.C1819T p.R607X . . . POLE 5426 broad.mit.edu 36 12 131736368 131736368 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006231 exon30 c.T3763G p.L1255V . . . POLE 5426 broad.mit.edu 36 12 131760362 131760362 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006231 exon13 c.G1231T p.V411L . . . ANKLE2 23141 broad.mit.edu 36 12 131841541 131841541 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015114 exon2 c.C433A p.P145T . . . ZNF26 7574 broad.mit.edu 36 12 132097208 132097208 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019591 exon4 c.C670T p.H224Y . . . GRIN2B 2904 broad.mit.edu 36 12 13797969 13797969 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000834 exon3 c.C559T p.R187C . . . GRIN2B 2904 broad.mit.edu 36 12 13798062 13798062 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000834 exon3 c.G466A p.V156I . . . GUCY2C 2984 broad.mit.edu 36 12 14685343 14685343 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004963 exon18 c.G2008A p.A670T . . . ART4 420 broad.mit.edu 36 12 14885024 14885024 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021071 exon2 c.T475G p.L159V . . . PTPRO 5800 broad.mit.edu 36 12 15528219 15528219 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002848 exon2 c.C120T p.I40I . . . SLCO1B3 28234 broad.mit.edu 36 12 20919573 20919573 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019844 exon8 c.G865T p.E289X . . . SLCO1B1 10599 broad.mit.edu 36 12 21261425 21261425 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006446 exon12 c.T1603C p.Y535H . . . GYS2 2998 broad.mit.edu 36 12 21604599 21604599 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021957 exon8 c.G1157A p.R386Q . . . CMAS 55907 broad.mit.edu 36 12 22099418 22099418 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018686 exon2 c.G329A p.R110Q . . . LRMP 4033 broad.mit.edu 36 12 25148563 25148563 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006152 exon19 c.C1048T p.R350C . . . KRAS 3845 broad.mit.edu 36 12 25289548 25289548 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004985 exon2 c.G38A p.G13D KRAS,lung,NS,Substitution - Missense,-1 . . CACNA1C 775 broad.mit.edu 36 12 2562274 2562274 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129842 exon15 c.C2129T p.S710L . . . CACNA1C 775 broad.mit.edu 36 12 2565305 2565305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129842 exon18 c.G2504A p.S835N . . . CACNA1C 775 broad.mit.edu 36 12 2576917 2576917 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129835 exon21 c.C2847A p.I949I . . . ITPR2 3709 broad.mit.edu 36 12 26384495 26384495 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002223 exon56 c.G7891A p.A2631T . . . ITPR2 3709 broad.mit.edu 36 12 26521117 26521117 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002223 exon44 c.G6214T p.E2072X . . . FGFR1OP2 26127 broad.mit.edu 36 12 27004718 27004718 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001171888 exon5 c.G400T p.D134Y . . . STK38L 23012 broad.mit.edu 36 12 27342028 27342028 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015000 exon2 c.T108G p.I36M . . . ARNTL2 56938 broad.mit.edu 36 12 27431481 27431481 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020183 exon7 c.C618T p.F206F . . . KDM5A 5927 broad.mit.edu 36 12 276552 276552 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042603 exon25 c.G4150A p.E1384K . . . OVCH1 341350 broad.mit.edu 36 12 29489517 29489517 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183378 exon23 c.G2842A p.G948S . . . OVCH1 341350 broad.mit.edu 36 12 29540857 29540857 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_183378 exon2 c.C82T p.R28C . . . IPO8 10526 broad.mit.edu 36 12 30681219 30681219 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006390 exon22 c.C2659T p.R887C . . . CAPRIN2 65981 broad.mit.edu 36 12 30760841 30760841 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002259 exon14 c.G2332T p.E778X . . . CAPRIN2 65981 broad.mit.edu 36 12 30773424 30773424 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002259 exon8 c.C1207T p.R403C . . . CAPRIN2 65981 broad.mit.edu 36 12 30797928 30797928 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002259 exon1 c.G37A p.E13K . . . C12orf35 55196 broad.mit.edu 36 12 32027396 32027396 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018169 exon4 c.C2240T p.S747F . . . C12orf35 55196 broad.mit.edu 36 12 32029547 32029547 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018169 exon4 c.C4391T p.S1464L . . . DNM1L 10059 broad.mit.edu 36 12 32782486 32782486 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012062 exon16 c.G1696T p.E566X . . . ALG10 84920 broad.mit.edu 36 12 34068168 34068168 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032834 exon2 c.A176G p.D59G . . . ALG10 84920 broad.mit.edu 36 12 34070716 34070716 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032834 exon3 c.A1021G p.T341A . . . CPNE8 144402 broad.mit.edu 36 12 37442219 37442219 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153634 exon9 c.G642T p.K214N . . . CPNE8 144402 broad.mit.edu 36 12 37520016 37520016 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153634 exon5 c.T299C p.V100A . . . CPNE8 144402 broad.mit.edu 36 12 37528638 37528638 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153634 exon4 c.C280T p.R94C . . . KIF21A 55605 broad.mit.edu 36 12 38031904 38031904 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173465 exon11 c.G1615A p.D539N . . . ABCD2 225 broad.mit.edu 36 12 38280652 38280652 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005164 exon6 c.A1634G p.Y545C . . . C12orf40 283461 broad.mit.edu 36 12 38330396 38330396 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031748 exon7 c.T659C p.F220S . . . SLC2A13 114134 broad.mit.edu 36 12 38444578 38444578 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052885 exon9 c.C1671T p.V557V . . . LRRK2 120892 broad.mit.edu 36 12 38918134 38918134 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198578 exon5 c.A533G p.K178R . . . LRRK2 120892 broad.mit.edu 36 12 38929924 38929924 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198578 exon8 c.G868A p.E290K . . . LRRK2 120892 broad.mit.edu 36 12 38933023 38933023 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198578 exon11 c.C1226T p.S409F . . . CNTN1 1272 broad.mit.edu 36 12 39705376 39705376 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_175038 exon20 c.A2648G p.D883G . . . PDZRN4 29951 broad.mit.edu 36 12 40253402 40253402 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001164595 exon10 c.A2554C p.S852R . . . YAF2 10138 broad.mit.edu 36 12 40840850 40840850 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190979 exon5 c.A423C p.E141D . . . PPHLN1 51535 broad.mit.edu 36 12 41121410 41121410 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201439 exon10 c.C936T p.F312F . . . ADAMTS20 80070 broad.mit.edu 36 12 42108863 42108863 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025003 exon25 c.G3496A p.V1166I . . . TMEM117 84216 broad.mit.edu 36 12 42979637 42979637 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032256 exon6 c.C616A p.L206I . . . NELL2 4753 broad.mit.edu 36 12 43202166 43202166 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145108 exon18 c.T2059G p.F687V . . . ANO6 196527 broad.mit.edu 36 12 44096765 44096765 + Silent SNP C T T rs12308034 byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025356 exon17 c.C2028T p.F676F . . . FGF6 2251 broad.mit.edu 36 12 4423637 4423637 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020996 exon2 c.C373T p.R125X . . . ARID2 196528 broad.mit.edu 36 12 44497842 44497842 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152641 exon5 c.A541G p.T181A . . . RAD51AP1 10635 broad.mit.edu 36 12 4535869 4535869 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006479 exon8 c.A811G p.K271E . . . AMIGO2 347902 broad.mit.edu 36 12 45758445 45758445 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181847 exon2 c.G608A p.R203Q . . . AMIGO2 347902 broad.mit.edu 36 12 45758752 45758752 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181847 exon2 c.C301T p.R101C . . . OR10AD1 121275 broad.mit.edu 36 12 46882728 46882728 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004134 exon1 c.C615T p.I205I . . . DDX23 9416 broad.mit.edu 36 12 47512208 47512208 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004818 exon15 c.G1984C p.G662R . . . CCDC65 85478 broad.mit.edu 36 12 47594573 47594573 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033124 exon3 c.A420C p.E140D . . . MLL2 8085 broad.mit.edu 36 12 47722624 47722624 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003482 exon27 c.T5854C p.F1952L . . . LIMA1 51474 broad.mit.edu 36 12 48857242 48857242 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113546 exon11 c.G2155T p.E719X . . . DIP2B 57609 broad.mit.edu 36 12 49360751 49360751 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173602 exon9 c.G1144A p.A382T . . . GALNT6 11226 broad.mit.edu 36 12 50039345 50039345 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007210 exon8 c.C1206T p.C402C . . . SCN8A 6334 broad.mit.edu 36 12 50454371 50454371 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014191 exon20 c.C3777A p.F1259L . . . GRASP 160622 broad.mit.edu 36 12 50693788 50693788 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181711 exon5 c.C505T p.R169X . . . KRT6C 286887 broad.mit.edu 36 12 51149314 51149314 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173086 exon9 c.C1494T p.G498G . . . KRT6A 3853 broad.mit.edu 36 12 51172934 51172934 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005554 exon1 c.C306T p.F102F . . . KRT5 3852 broad.mit.edu 36 12 51200027 51200027 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000424 exon1 c.C321T p.F107F . . . KRT71 112802 broad.mit.edu 36 12 51230155 51230155 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033448 exon2 c.C581T p.T194M . . . KRT74 121391 broad.mit.edu 36 12 51252635 51252635 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_175053 exon2 c.G555T p.K185N . . . KRT72 140807 broad.mit.edu 36 12 51267709 51267709 + Missense_Mutation SNP C T T rs11170183 byCluster;byFrequency;by2Hit2Allele;byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146226 exon6 c.G1157A p.R386H . . . KRT72 140807 broad.mit.edu 36 12 51279160 51279160 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146226 exon2 c.C430T p.R144W . . . KRT73 319101 broad.mit.edu 36 12 51296375 51296375 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175068 exon2 c.G504A p.Q168Q . . . KRT1 3848 broad.mit.edu 36 12 51356501 51356501 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006121 exon7 c.G1300A p.E434K . . . KRT4 3851 broad.mit.edu 36 12 51487422 51487422 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002272 exon8 c.G1591A p.A531T . . . EIF4B 1975 broad.mit.edu 36 12 51707844 51707844 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001417 exon7 c.C679T p.R227C . . . HOXC10 3226 broad.mit.edu 36 12 52665670 52665670 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017409 exon1 c.G360A p.A120A . . . HOXC4 3221 broad.mit.edu 36 12 52734934 52734934 + Missense_Mutation SNP G A A rs11835301 byCluster;byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014620 exon4 c.G473A p.R158H . . . CBX5 23468 broad.mit.edu 36 12 52932167 52932167 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127322 exon3 c.G249A p.E83E . . . HNRNPA1 3178 broad.mit.edu 36 12 52961501 52961501 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031157 exon2 c.A80G p.D27G . . . NFE2 4778 broad.mit.edu 36 12 52973196 52973196 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136023 exon3 c.T351C p.S117S . . . ZNF385A 25946 broad.mit.edu 36 12 53051723 53051723 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015481 exon4 c.G405T p.E135D . . . NCKAP1L 3071 broad.mit.edu 36 12 53222693 53222693 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184976 exon31 c.G3191A p.R1064Q . . . PDE1B 5153 broad.mit.edu 36 12 53249235 53249235 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000924 exon4 c.G228A p.R76R . . . PDE1B 5153 broad.mit.edu 36 12 53256743 53256743 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000924 exon14 c.G1498A p.A500T . . . NEUROD4 58158 broad.mit.edu 36 12 53706779 53706779 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021191 exon2 c.C289T p.R97W . . . OR9K2 441639 broad.mit.edu 36 12 53810578 53810578 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005243 exon1 c.A759G p.I253M . . . OR6C74 254783 broad.mit.edu 36 12 53927532 53927532 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005490 exon1 c.C194A p.S65X . . . MMP19 4327 broad.mit.edu 36 12 54517901 54517901 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002429 exon7 c.C1053T p.F351F . . . NTF3 4908 broad.mit.edu 36 12 5473671 5473671 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102654 exon2 c.C69T p.L23L . . . ANKRD52 283373 broad.mit.edu 36 12 54925237 54925237 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173595 exon22 c.T2409G p.H803Q . . . RBMS2 5939 broad.mit.edu 36 12 55242566 55242566 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002898 exon2 c.A165C p.K55N . . . BAZ2A 11176 broad.mit.edu 36 12 55280734 55280734 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013449 exon23 c.C4606T p.R1536W . . . BAZ2A 11176 broad.mit.edu 36 12 55283468 55283468 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013449 exon18 c.T3227C p.V1076A . . . NACA 4666 broad.mit.edu 36 12 55400812 55400812 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113203 exon3 c.T769C p.S257P . . . SDR9C7 121214 broad.mit.edu 36 12 55614273 55614273 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148897 exon1 c.T40C p.F14L . . . RDH16 8608 broad.mit.edu 36 12 55632244 55632244 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003708 exon4 c.G790A p.V264M . . . ZBTB39 9880 broad.mit.edu 36 12 55684331 55684331 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014830 exon2 c.A638G p.D213G . . . NAB2 4665 broad.mit.edu 36 12 55772006 55772006 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005967 exon2 c.C915T p.F305F . . . ANO2 57101 broad.mit.edu 36 12 5592349 5592349 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020373 exon19 c.C1965T p.F655F . . . GLI1 2735 broad.mit.edu 36 12 56148105 56148105 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160045 exon8 c.G755A p.R252Q . . . MARS 4141 broad.mit.edu 36 12 56180442 56180442 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004990 exon10 c.G1163A p.R388Q . . . MBD6 114785 broad.mit.edu 36 12 56206096 56206096 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052897 exon6 c.C1078T p.R360C . . . MBD6 114785 broad.mit.edu 36 12 56206415 56206415 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052897 exon6 c.G1397A p.S466N . . . DCTN2 10540 broad.mit.edu 36 12 56226078 56226078 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006400 exon2 c.G105A p.A35A . . . LRIG3 121227 broad.mit.edu 36 12 57560904 57560904 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153377 exon13 c.G1527A p.S509S . . . SLC16A7 9194 broad.mit.edu 36 12 58455458 58455458 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004731 exon4 c.C1115T p.S372F . . . VWF 7450 broad.mit.edu 36 12 6089978 6089978 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000552 exon5 c.T355C p.Y119H . . . USP15 9958 broad.mit.edu 36 12 61064163 61064163 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006313 exon10 c.G1199A p.R400Q . . . MON2 23041 broad.mit.edu 36 12 61224999 61224999 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015026 exon21 c.T2521C p.S841P . . . DPY19L2 283417 broad.mit.edu 36 12 62306534 62306534 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173812 exon7 c.C843A p.F281L . . . DPY19L2 283417 broad.mit.edu 36 12 62343810 62343810 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173812 exon3 c.G445T p.E149X . . . XPOT 11260 broad.mit.edu 36 12 63105910 63105910 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007235 exon15 c.C1621T p.R541W . . . XPOT 11260 broad.mit.edu 36 12 63114886 63114886 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007235 exon21 c.A2615G p.H872R . . . LEMD3 23592 broad.mit.edu 36 12 63921020 63921020 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014319 exon9 c.C2191T p.R731C . . . LEMD3 23592 broad.mit.edu 36 12 63923510 63923510 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014319 exon10 c.C2381T p.P794L . . . MSRB3 253827 broad.mit.edu 36 12 64143272 64143272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193461 exon7 c.C461T p.S154L . . . IRAK3 11213 broad.mit.edu 36 12 64908330 64908330 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142523 exon7 c.G617A p.R206Q . . . GRIP1 23426 broad.mit.edu 36 12 65135598 65135598 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178074 exon10 c.T1056G p.S352S . . . NOP2 4839 broad.mit.edu 36 12 6539614 6539614 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006170 exon15 c.G1688A p.R563Q . . . CAND1 55832 broad.mit.edu 36 12 65985918 65985918 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018448 exon10 c.C2203A p.L735I . . . ACRBP 84519 broad.mit.edu 36 12 6626308 6626308 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032489 exon2 c.A175G p.T59A . . . IFNG 3458 broad.mit.edu 36 12 66837981 66837981 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000619 exon3 c.C345T p.F115F . . . IL26 55801 broad.mit.edu 36 12 66905533 66905533 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018402 exon2 c.A186C p.K62N . . . MDM2 4193 broad.mit.edu 36 12 67519440 67519440 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002392 exon11 c.A1038C p.E346D . . . MDM2 4193 broad.mit.edu 36 12 67519885 67519885 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002392 exon11 c.T1483C p.Y495H . . . TPI1 7167 broad.mit.edu 36 12 6848766 6848766 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000365 exon4 c.A408C p.E136D . . . LRRC23 10233 broad.mit.edu 36 12 6893418 6893418 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006992 exon7 c.A861C p.E287D . . . ATN1 1822 broad.mit.edu 36 12 6913609 6913609 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001007026 exon3 c.A37C p.R13R . . . TSPAN8 7103 broad.mit.edu 36 12 69809382 69809382 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004616 exon8 c.T656C p.I219T . . . C1S 716 broad.mit.edu 36 12 7045289 7045289 + Missense_Mutation SNP G A A rs20573 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201442 exon10 c.G1148A p.R383H . . . TRHDE 29953 broad.mit.edu 36 12 71149807 71149807 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013381 exon4 c.C1183A p.L395I . . . PEX5 5830 broad.mit.edu 36 12 7253661 7253661 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001131024 exon14 c.G1565A p.R522H . . . CD163 9332 broad.mit.edu 36 12 7525065 7525065 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203416 exon15 c.C3302A p.S1101Y . . . CD163 9332 broad.mit.edu 36 12 7527310 7527310 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203416 exon12 c.C3008A p.S1003Y . . . CD163 9332 broad.mit.edu 36 12 7530813 7530813 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_203416 exon9 c.C2087T p.S696L . . . E2F7 144455 broad.mit.edu 36 12 75974022 75974022 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203394 exon3 c.G113A p.R38Q . . . APOBEC1 339 broad.mit.edu 36 12 7696622 7696622 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001644 exon3 c.G121A p.E41K . . . GDF3 9573 broad.mit.edu 36 12 7733799 7733799 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020634 exon2 c.A1037G p.D346G . . . GDF3 9573 broad.mit.edu 36 12 7739508 7739508 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020634 exon1 c.C84A p.V28V . . . CLEC4C 170482 broad.mit.edu 36 12 7774750 7774750 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203503 exon5 c.G314T p.R105I . . . MYF6 4618 broad.mit.edu 36 12 79626770 79626770 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002469 exon3 c.C629T p.S210L . . . ACSS3 79611 broad.mit.edu 36 12 80171485 80171485 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024560 exon15 c.C1900T p.R634X . . . PPFIA2 8499 broad.mit.edu 36 12 80672008 80672008 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003625 exon3 c.A124C p.R42R . . . C3AR1 719 broad.mit.edu 36 12 8103214 8103214 + Missense_Mutation SNP C T T rs56297048 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004054 exon2 c.G835A p.E279K . . . SLC6A15 55117 broad.mit.edu 36 12 83801923 83801923 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018057 exon5 c.C602A p.S201Y . . . LRRIQ1 84125 broad.mit.edu 36 12 83974883 83974883 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032165 exon8 c.C2181T p.C727C . . . LRRIQ1 84125 broad.mit.edu 36 12 83983228 83983228 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032165 exon9 c.T2449C p.C817R . . . LRRIQ1 84125 broad.mit.edu 36 12 84055831 84055831 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079910 exon19 c.G4282A p.D1428N . . . MGAT4C 25834 broad.mit.edu 36 12 84897953 84897953 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013244 exon7 c.C682T p.R228X . . . MGAT4C 25834 broad.mit.edu 36 12 84898307 84898307 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013244 exon7 c.C328T p.R110X . . . C12orf50 160419 broad.mit.edu 36 12 86907205 86907205 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152589 exon8 c.G667T p.E223X . . . CEP290 80184 broad.mit.edu 36 12 87003990 87003990 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025114 exon34 c.G4394A p.R1465Q . . . KITLG 4254 broad.mit.edu 36 12 87434293 87434293 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003994 exon5 c.G469A p.A157T . . . WNK1 65125 broad.mit.edu 36 12 880077 880077 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184985 exon26 c.G7403A p.S2468N . . . POC1B 282809 broad.mit.edu 36 12 88384823 88384823 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172240 exon9 c.T887C p.L296S . . . ATP2B1 490 broad.mit.edu 36 12 88509136 88509136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001682 exon20 c.C3419T p.S1140L . . . ATP2B1 490 broad.mit.edu 36 12 88519272 88519272 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001323 exon18 c.T3130C p.S1044P . . . ATP2B1 490 broad.mit.edu 36 12 88529117 88529117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001323 exon12 c.G2231A p.R744Q . . . A2ML1 144568 broad.mit.edu 36 12 8901040 8901040 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144670 exon24 c.C2862A p.G954G . . . A2M 2 broad.mit.edu 36 12 9137373 9137373 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000014 exon18 c.G2195A p.R732Q . . . A2M 2 broad.mit.edu 36 12 9151426 9151426 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000014 exon8 c.T840C p.G280G . . . A2M 2 broad.mit.edu 36 12 9153831 9153831 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000014 exon6 c.C572A p.S191Y . . . PLEKHG7 440107 broad.mit.edu 36 12 91682027 91682027 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004330 exon10 c.C860T p.S287L . . . SOCS2 8835 broad.mit.edu 36 12 92492776 92492776 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003877 exon3 c.G287A p.R96Q . . . SOCS2 8835 broad.mit.edu 36 12 92492868 92492868 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003877 exon3 c.G379A p.D127N . . . PLXNC1 10154 broad.mit.edu 36 12 93145077 93145077 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005761 exon9 c.G1915A p.E639K . . . TMCC3 57458 broad.mit.edu 36 12 93499967 93499967 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020698 exon2 c.C557T p.S186L . . . FGD6 55785 broad.mit.edu 36 12 94025484 94025484 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018351 exon12 c.C3319T p.R1107X . . . FGD6 55785 broad.mit.edu 36 12 94055509 94055509 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018351 exon7 c.G2914T p.E972X . . . USP44 84101 broad.mit.edu 36 12 94451676 94451676 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042403 exon2 c.G488A p.R163Q . . . AMDHD1 144193 broad.mit.edu 36 12 94878335 94878335 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152435 exon5 c.G616T p.D206Y . . . CDK17 5128 broad.mit.edu 36 12 95198741 95198741 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002595 exon16 c.C1510T p.R504X . . . NEDD1 121441 broad.mit.edu 36 12 95858327 95858327 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152905 exon10 c.G1127A p.R376Q . . . SLC25A3 5250 broad.mit.edu 36 12 97517924 97517924 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002635 exon6 c.C702T p.F234F . . . APAF1 317 broad.mit.edu 36 12 97588926 97588926 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013229 exon11 c.A1506C p.K502N . . . CLECL1 160365 broad.mit.edu 36 12 9766610 9766610 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172004 exon2 c.A383C p.K128T . . . CLECL1 160365 broad.mit.edu 36 12 9776964 9776964 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_172004 exon1 c.C164A p.S55Y . . . ANKS1B 56899 broad.mit.edu 36 12 97971109 97971109 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181670 exon3 c.C413T p.S138L . . . CD69 969 broad.mit.edu 36 12 9799090 9799090 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001781 exon3 c.C222T p.F74F . . . UHRF1BP1L 23074 broad.mit.edu 36 12 98976136 98976136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015054 exon14 c.C3050T p.S1017L . . . PLEKHA9 51054 broad.mit.edu 36 12 43853910 43853910 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PLEKHA9 51054 broad.mit.edu 36 12 43854358 43854358 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TPP2 7174 broad.mit.edu 36 13 102066778 102066778 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003291 exon4 c.T422C p.V141A . . . ERCC5 2073 broad.mit.edu 36 13 102289975 102289975 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159596 exon9 c.G605T p.R202I . . . ERCC5 2073 broad.mit.edu 36 13 102302591 102302591 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000123 exon2 c.C211T p.R71C . . . ERCC5 2073 broad.mit.edu 36 13 102308725 102308725 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000123 exon6 c.G628T p.E210X . . . SLC10A2 6555 broad.mit.edu 36 13 102516558 102516558 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000452 exon1 c.T43G p.S15A . . . MYO16 23026 broad.mit.edu 36 13 108551198 108551198 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198950 exon28 c.C3400T p.R1134X . . . COL4A1 1282 broad.mit.edu 36 13 109662825 109662825 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001845 exon6 c.A327C p.G109G . . . F10 2159 broad.mit.edu 36 13 112831803 112831803 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000504 exon2 c.C107T p.A36V . . . CDC16 8881 broad.mit.edu 36 13 114048784 114048784 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001078645 exon17 c.G1570A p.E524K . . . CDC16 8881 broad.mit.edu 36 13 114055842 114055842 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001078645 exon18 c.C1685T p.P562L . . . TUBA3C 7278 broad.mit.edu 36 13 18649107 18649107 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006001 exon4 c.G1016A p.R339H . . . TPTE2 93492 broad.mit.edu 36 13 18923334 18923334 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001141968 exon10 c.G440A p.R147Q . . . MPHOSPH8 54737 broad.mit.edu 36 13 19118824 19118824 + De_novo_Start_OutOfFrame SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017520 exon3 c.C611A p.S204Y . . . ZMYM5 9205 broad.mit.edu 36 13 19323925 19323925 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039650 exon3 c.G396T p.E132D . . . CRYL1 51084 broad.mit.edu 36 13 19876300 19876300 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015974 exon8 c.G928A p.A310T . . . N6AMT2 221143 broad.mit.edu 36 13 20229600 20229600 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174928 exon2 c.G138T p.E46D . . . LATS2 26524 broad.mit.edu 36 13 20455817 20455817 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014572 exon5 c.C2028T p.I676I . . . FGF9 2254 broad.mit.edu 36 13 21153225 21153225 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002010 exon2 c.C322T p.R108X . . . SGCG 6445 broad.mit.edu 36 13 22675933 22675933 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000231 exon2 c.C100T p.R34C . . . SACS 26278 broad.mit.edu 36 13 22802858 22802858 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.G13157A p.R4386Q . . . SACS 26278 broad.mit.edu 36 13 22806186 22806186 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.G9829T p.D3277Y . . . SACS 26278 broad.mit.edu 36 13 22811577 22811577 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.G4438T p.E1480X . . . SACS 26278 broad.mit.edu 36 13 22827713 22827713 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon8 c.G1038A p.P346P . . . SACS 26278 broad.mit.edu 36 13 22827924 22827924 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon8 c.G827A p.R276H . . . TNFRSF19 55504 broad.mit.edu 36 13 23088124 23088124 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148957 exon4 c.G299A p.R100H . . . C1QTNF9B 387911 broad.mit.edu 36 13 23363742 23363742 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007537 exon3 c.G688A p.E230K . . . SPATA13 221178 broad.mit.edu 36 13 23761310 23761310 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166271 exon8 c.T2841C p.L947L . . . ATP12A 479 broad.mit.edu 36 13 24179162 24179162 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185085 exon16 c.A2189G p.D730G . . . RNF17 56163 broad.mit.edu 36 13 24265200 24265200 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001184993 exon10 c.A956T p.E319V . . . CENPJ 55835 broad.mit.edu 36 13 24356188 24356188 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018451 exon16 c.C3737T p.T1246M . . . CENPJ 55835 broad.mit.edu 36 13 24361526 24361526 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018451 exon11 c.C3229T p.R1077X . . . PABPC3 5042 broad.mit.edu 36 13 24568420 24568420 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030979 exon1 c.C84T p.Y28Y . . . PABPC3 5042 broad.mit.edu 36 13 24569874 24569874 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030979 exon1 c.G1538A p.R513H . . . ATP8A2 51761 broad.mit.edu 36 13 25054085 25054085 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016529 exon23 c.G2136A p.A712A . . . RNF6 6049 broad.mit.edu 36 13 25687577 25687577 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005977 exon5 c.C442T p.R148W . . . WASF3 10810 broad.mit.edu 36 13 26157937 26157937 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006646 exon10 c.C1464A p.D488E . . . LNX2 222484 broad.mit.edu 36 13 27025441 27025441 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153371 exon8 c.C1682T p.A561V . . . FLT1 2321 broad.mit.edu 36 13 27775366 27775366 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002019 exon30 c.G3955A p.A1319T . . . FLT1 2321 broad.mit.edu 36 13 27793610 27793610 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002019 exon23 c.G3164A p.R1055K . . . FLT1 2321 broad.mit.edu 36 13 27939736 27939736 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002019 exon2 c.A83C p.K28T . . . MTUS2 23281 broad.mit.edu 36 13 28960051 28960051 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033602 exon9 c.C3444T p.T1148T . . . MTUS2 23281 broad.mit.edu 36 13 28964842 28964842 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033602 exon10 c.C3595T p.R1199W . . . KATNAL1 84056 broad.mit.edu 36 13 29702689 29702689 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032116 exon8 c.G928T p.D310Y . . . USPL1 10208 broad.mit.edu 36 13 30129902 30129902 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005800 exon9 c.A1688G p.D563G . . . FRY 10129 broad.mit.edu 36 13 31647726 31647726 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon20 c.C2378A p.S793Y . . . FRY 10129 broad.mit.edu 36 13 31737599 31737599 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon54 c.C7792T p.R2598C . . . BRCA2 675 broad.mit.edu 36 13 31804611 31804611 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon10 c.T996G p.I332M . . . BRCA2 675 broad.mit.edu 36 13 31812965 31812965 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon11 c.T6473G p.F2158C . . . BRCA2 675 broad.mit.edu 36 13 31852279 31852279 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon24 c.A9253G p.T3085A . . . BRCA2 675 broad.mit.edu 36 13 31870706 31870706 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon27 c.T10056G p.L3352L . . . PDS5B 23047 broad.mit.edu 36 13 32247185 32247185 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015032 exon35 c.C4339T p.R1447X . . . NBEA 26960 broad.mit.edu 36 13 34590599 34590599 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015678 exon16 c.G2231T p.R744I . . . NBEA 26960 broad.mit.edu 36 13 34631188 34631188 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015678 exon22 c.A2880C p.K960N . . . NBEA 26960 broad.mit.edu 36 13 35022683 35022683 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015678 exon42 c.C6655T p.R2219C . . . NBEA 26960 broad.mit.edu 36 13 35139564 35139564 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015678 exon56 c.G8455T p.G2819X . . . DCLK1 9201 broad.mit.edu 36 13 35300442 35300442 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001195416 exon5 c.C311T p.S104L . . . SOHLH2 54937 broad.mit.edu 36 13 35674117 35674117 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017826 exon2 c.G162T p.K54N . . . SPG20 23111 broad.mit.edu 36 13 35807193 35807193 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142295 exon2 c.G775A p.D259N . . . SPG20 23111 broad.mit.edu 36 13 35807276 35807276 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142295 exon2 c.T692G p.F231C . . . FAM48A 55578 broad.mit.edu 36 13 36512587 36512587 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017569 exon9 c.T525G p.I175M . . . POSTN 10631 broad.mit.edu 36 13 37052719 37052719 + Nonsense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135934 exon11 c.T1508G p.L503X . . . POSTN 10631 broad.mit.edu 36 13 37060027 37060027 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135934 exon5 c.A538C p.K180Q . . . TRPC4 7223 broad.mit.edu 36 13 37109382 37109382 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016179 exon11 c.C2592A p.I864I . . . TRPC4 7223 broad.mit.edu 36 13 37135742 37135742 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135957 exon6 c.C1499A p.S500Y . . . FREM2 341640 broad.mit.edu 36 13 38163333 38163333 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207361 exon1 c.G3852A p.G1284G FREM2,central_nervous_system,brain,Substitution - coding silent,0 . . COG6 57511 broad.mit.edu 36 13 39159654 39159654 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145079 exon9 c.A803C p.E268A . . . FOXO1 2308 broad.mit.edu 36 13 40032523 40032523 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002015 exon2 c.G1105A p.E369K . . . KIAA0564 23078 broad.mit.edu 36 13 41163546 41163546 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015058 exon32 c.G3776A p.R1259Q . . . TNFSF11 8600 broad.mit.edu 36 13 42073020 42073020 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003701 exon4 c.G435A p.A145A . . . TNFSF11 8600 broad.mit.edu 36 13 42078898 42078898 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003701 exon5 c.G798A p.G266G . . . ENOX1 55068 broad.mit.edu 36 13 42828243 42828243 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127615 exon8 c.G635A p.G212D . . . KCTD4 386618 broad.mit.edu 36 13 44666422 44666422 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198404 exon2 c.G281A p.R94Q . . . SPERT 220082 broad.mit.edu 36 13 45185374 45185374 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152719 exon3 c.C213T p.C71C . . . ZC3H13 23091 broad.mit.edu 36 13 45439940 45439940 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015070 exon15 c.C4021T p.R1341X . . . LCP1 3936 broad.mit.edu 36 13 45626972 45626972 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002298 exon6 c.A542G p.N181S . . . LCP1 3936 broad.mit.edu 36 13 45631737 45631737 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002298 exon2 c.T62C p.V21A . . . C13orf18 80183 broad.mit.edu 36 13 45817625 45817625 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025113 exon13 c.G1743T p.K581N . . . HTR2A 3356 broad.mit.edu 36 13 46307550 46307550 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165947 exon3 c.C587A p.S196Y . . . LPAR6 10161 broad.mit.edu 36 13 47884287 47884287 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005767 exon7 c.T274C p.S92P . . . FNDC3A 22862 broad.mit.edu 36 13 48675347 48675347 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001079673 exon25 c.T3208G p.L1070V . . . PHF11 51131 broad.mit.edu 36 13 48978834 48978834 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040443 exon2 c.G157A p.E53K . . . KCNRG 283518 broad.mit.edu 36 13 49492590 49492590 + Nonstop_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173605 exon2 c.G818T p.X273L . . . FAM124A 220108 broad.mit.edu 36 13 50724164 50724164 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145019 exon4 c.C768A p.F256L . . . INTS6 26512 broad.mit.edu 36 13 50848265 50848265 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012141 exon13 c.G1649A p.R550Q . . . INTS6 26512 broad.mit.edu 36 13 50859533 50859533 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012141 exon7 c.C884T p.S295L . . . NEK5 341676 broad.mit.edu 36 13 51537689 51537689 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199289 exon22 c.C1982T p.A661V . . . NEK5 341676 broad.mit.edu 36 13 51537736 51537736 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199289 exon22 c.G1935A p.T645T . . . NEK5 341676 broad.mit.edu 36 13 51559489 51559489 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199289 exon15 c.G1378A p.E460K . . . NEK3 4752 broad.mit.edu 36 13 51613170 51613170 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152720 exon11 c.A914G p.E305G . . . CKAP2 26586 broad.mit.edu 36 13 51933216 51933216 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001098525 exon4 c.G257A p.R86K . . . CKAP2 26586 broad.mit.edu 36 13 51945984 51945984 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098525 exon8 c.T1569G p.S523S . . . LECT1 11061 broad.mit.edu 36 13 52180707 52180707 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011705 exon6 c.G754A p.D252N . . . OLFM4 10562 broad.mit.edu 36 13 52522720 52522720 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006418 exon5 c.G1346A p.R449K . . . PCDH20 64881 broad.mit.edu 36 13 60884738 60884738 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_022843 exon2 c.C1495T p.L499L . . . PCDH9 5101 broad.mit.edu 36 13 66375652 66375652 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203487 exon3 c.A3123C p.E1041D . . . UCHL3 7347 broad.mit.edu 36 13 75077902 75077902 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006002 exon9 c.G646A p.D216N . . . LMO7 4008 broad.mit.edu 36 13 75280090 75280090 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015842 exon7 c.T971G p.F324C . . . LMO7 4008 broad.mit.edu 36 13 75291555 75291555 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015842 exon10 c.G1391A p.R464Q . . . FBXL3 26224 broad.mit.edu 36 13 76479801 76479801 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012158 exon5 c.G767A p.R256H . . . MYCBP2 23077 broad.mit.edu 36 13 76540940 76540940 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015057 exon70 c.C11932T p.R3978C . . . MYCBP2 23077 broad.mit.edu 36 13 76760353 76760353 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015057 exon3 c.G538A p.E180K . . . EDNRB 1910 broad.mit.edu 36 13 77390701 77390701 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122659 exon1 c.G9A p.P3P . . . SLITRK1 114798 broad.mit.edu 36 13 83353410 83353410 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052910 exon1 c.C234T p.F78F . . . SLITRK6 84189 broad.mit.edu 36 13 85266621 85266621 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032229 exon2 c.C2024T p.A675V . . . SLITRK6 84189 broad.mit.edu 36 13 85267441 85267441 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032229 exon2 c.C1204A p.L402I . . . GPC5 2262 broad.mit.edu 36 13 91143784 91143784 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004466 exon3 c.G668A p.R223H . . . DCT 1638 broad.mit.edu 36 13 93893700 93893700 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001922 exon7 c.G1372A p.D458N . . . GPR180 160897 broad.mit.edu 36 13 94069456 94069456 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_180989 exon4 c.G557A p.C186Y . . . ABCC4 10257 broad.mit.edu 36 13 94659804 94659804 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105515 exon6 c.G670A p.A224T . . . DZIP1 22873 broad.mit.edu 36 13 95049641 95049641 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014934 exon14 c.G1459T p.E487X . . . DZIP1 22873 broad.mit.edu 36 13 95075041 95075041 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014934 exon8 c.G954T p.K318N . . . IPO5 3843 broad.mit.edu 36 13 97453156 97453156 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002271 exon16 c.G1415A p.G472D . . . FARP1 10160 broad.mit.edu 36 13 97861077 97861077 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005766 exon15 c.C1691T p.S564L . . . STK24 8428 broad.mit.edu 36 13 97916669 97916669 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003576 exon6 c.G781A p.E261K . . . DOCK9 23348 broad.mit.edu 36 13 98247719 98247719 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015296 exon53 c.C5983T p.R1995C . . . PCCA 5095 broad.mit.edu 36 13 99875905 99875905 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178004 exon20 c.G1764A p.S588S . . . DYNC1H1 1778 broad.mit.edu 36 14 101519259 101519259 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon6 c.A1112C p.K371T . . . DYNC1H1 1778 broad.mit.edu 36 14 101523645 101523645 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon9 c.G2641T p.V881F . . . TECPR2 9895 broad.mit.edu 36 14 101912883 101912883 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014844 exon2 c.G72A p.P24P . . . CDC42BPB 9578 broad.mit.edu 36 14 102516951 102516951 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006035 exon8 c.G1052A p.R351Q . . . EIF5 1983 broad.mit.edu 36 14 102872899 102872899 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183004 exon4 c.T287G p.F96C . . . EIF5 1983 broad.mit.edu 36 14 102876609 102876609 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183004 exon10 c.A1164C p.E388D . . . MARK3 4140 broad.mit.edu 36 14 103003233 103003233 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128919 exon11 c.C1062T p.Y354Y . . . C14orf153 84334 broad.mit.edu 36 14 103126285 103126285 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032374 exon5 c.G530A p.R177H . . . AHNAK2 113146 broad.mit.edu 36 14 104478877 104478877 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.C13956T p.I4652I . . . AHNAK2 113146 broad.mit.edu 36 14 104479077 104479077 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.G13756A p.D4586N . . . AHNAK2 113146 broad.mit.edu 36 14 104479347 104479347 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.G13486A p.D4496N . . . AHNAK2 113146 broad.mit.edu 36 14 104483869 104483869 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.C8964T p.F2988F . . . OR4K5 79317 broad.mit.edu 36 14 19458956 19458956 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005483 exon1 c.G351A p.S117S . . . OR4K1 79544 broad.mit.edu 36 14 19473816 19473816 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004063 exon1 c.T151G p.F51V . . . OR4K1 79544 broad.mit.edu 36 14 19473892 19473892 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004063 exon1 c.T227C p.F76S . . . OR11G2 390439 broad.mit.edu 36 14 19735812 19735812 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005503 exon1 c.C478T p.R160X . . . OR11H4 390442 broad.mit.edu 36 14 19781751 19781751 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004479 exon1 c.C961T p.R321C . . . RNASE11 122651 broad.mit.edu 36 14 20122012 20122012 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145250 exon3 c.A462G p.E154E . . . TOX4 9878 broad.mit.edu 36 14 21030569 21030569 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014828 exon7 c.T954C p.P318P . . . ABHD4 63874 broad.mit.edu 36 14 22142221 22142221 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022060 exon3 c.G199A p.D67N . . . ABHD4 63874 broad.mit.edu 36 14 22142807 22142807 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022060 exon4 c.G623A p.R208Q . . . SLC22A17 51310 broad.mit.edu 36 14 22886967 22886967 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020372 exon6 c.A917C p.K306T . . . MYH7 4625 broad.mit.edu 36 14 22964462 22964462 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000257 exon21 c.C2292A p.F764L . . . MYH7 4625 broad.mit.edu 36 14 22967586 22967586 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000257 exon15 c.G1541A p.G514D . . . MYH7 4625 broad.mit.edu 36 14 22972671 22972671 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000257 exon3 c.C111A p.V37V . . . CPNE6 9362 broad.mit.edu 36 14 23613759 23613759 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006032 exon7 c.T587C p.V196A . . . PCK2 5106 broad.mit.edu 36 14 23637365 23637365 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001018073 exon3 c.A389C p.Q130P . . . DCAF11 80344 broad.mit.edu 36 14 23654690 23654690 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001163484 exon2 c.C47T p.P16L . . . PSME1 5720 broad.mit.edu 36 14 23676586 23676586 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176783 exon5 c.A264G p.E88E . . . FAM158A 51016 broad.mit.edu 36 14 23678598 23678598 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_016049 exon4 c.T341G p.I114S . . . IRF9 10379 broad.mit.edu 36 14 23702139 23702139 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006084 exon3 c.G305A p.R102H . . . TSSK4 283629 broad.mit.edu 36 14 23745123 23745123 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174944 exon1 c.G154A p.A52T . . . RABGGTA 5875 broad.mit.edu 36 14 23807611 23807611 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004581 exon9 c.C955T p.R319C . . . RIPK3 11035 broad.mit.edu 36 14 23876235 23876235 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006871 exon8 c.C1172T p.S391L . . . FOXG1 2290 broad.mit.edu 36 14 28306925 28306925 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005249 exon1 c.G689A p.R230H . . . PRKD1 5587 broad.mit.edu 36 14 29264629 29264629 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002742 exon2 c.C267T p.F89F . . . G2E3 55632 broad.mit.edu 36 14 30131332 30131332 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017769 exon5 c.G290A p.R97Q . . . AKAP6 9472 broad.mit.edu 36 14 32084918 32084918 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004274 exon4 c.A1308C p.K436N . . . AKAP6 9472 broad.mit.edu 36 14 32312844 32312844 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004274 exon12 c.G3582T p.K1194N . . . BAZ1A 11177 broad.mit.edu 36 14 34401265 34401265 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013448 exon3 c.G128A p.R43Q . . . PPP2R3C 55012 broad.mit.edu 36 14 34638277 34638277 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017917 exon7 c.C638A p.S213Y . . . RALGAPA1 253959 broad.mit.edu 36 14 35111524 35111524 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194301 exon37 c.A5843C p.K1948T . . . SLC25A21 89874 broad.mit.edu 36 14 36222794 36222794 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171170 exon9 c.A828G p.R276R . . . SSTR1 6751 broad.mit.edu 36 14 37748862 37748862 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001049 exon3 c.G517A p.V173M . . . LRFN5 145581 broad.mit.edu 36 14 41426597 41426597 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152447 exon3 c.G1019T p.G340V . . . FSCB 84075 broad.mit.edu 36 14 44044626 44044626 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032135 exon1 c.G1315T p.E439X . . . FSCB 84075 broad.mit.edu 36 14 44045907 44045907 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032135 exon1 c.G34T p.E12X . . . C14orf28 122525 broad.mit.edu 36 14 44439574 44439574 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017923 exon2 c.C186A p.F62L . . . FANCM 57697 broad.mit.edu 36 14 44715534 44715534 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020937 exon14 c.C3827T p.S1276L . . . MDGA2 161357 broad.mit.edu 36 14 46574038 46574038 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182830 exon8 c.A851G p.Y284C . . . SDCCAG1 9147 broad.mit.edu 36 14 49365215 49365215 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004713 exon14 c.G1293A p.E431E . . . SDCCAG1 9147 broad.mit.edu 36 14 49377302 49377302 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004713 exon5 c.A390C p.V130V . . . CDKL1 8814 broad.mit.edu 36 14 49878649 49878649 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004196 exon4 c.G408A p.T136T . . . PYGL 5836 broad.mit.edu 36 14 50441968 50441968 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002863 exon20 c.C2436T p.F812F . . . C14orf166 51637 broad.mit.edu 36 14 51540692 51540692 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016039 exon7 c.C562A p.L188I . . . STYX 6815 broad.mit.edu 36 14 52293793 52293793 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145251 exon6 c.G310T p.E104X . . . DDHD1 80821 broad.mit.edu 36 14 52599517 52599517 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160148 exon7 c.C1660T p.R554W . . . WDHD1 11169 broad.mit.edu 36 14 54537099 54537099 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007086 exon10 c.A814T p.K272X . . . WDHD1 11169 broad.mit.edu 36 14 54545131 54545131 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007086 exon5 c.G398A p.R133Q . . . KTN1 3895 broad.mit.edu 36 14 55209152 55209152 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004986 exon37 c.G3496A p.E1166K . . . PELI2 57161 broad.mit.edu 36 14 55833216 55833216 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021255 exon6 c.G842A p.R281Q . . . C14orf101 54916 broad.mit.edu 36 14 56152440 56152440 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017799 exon8 c.G883A p.E295K . . . EXOC5 10640 broad.mit.edu 36 14 56745124 56745124 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006544 exon18 c.C2083T p.R695C . . . ARID4A 5926 broad.mit.edu 36 14 57902661 57902661 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002892 exon22 c.G3483A p.P1161P . . . KIAA0586 9786 broad.mit.edu 36 14 57980568 57980568 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014749 exon6 c.C729T p.H243H . . . KIAA0586 9786 broad.mit.edu 36 14 57994312 57994312 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014749 exon11 c.C1445T p.S482F . . . DACT1 51339 broad.mit.edu 36 14 58182358 58182358 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079520 exon4 c.G1153T p.E385X . . . SIX6 4990 broad.mit.edu 36 14 60046117 60046117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007374 exon1 c.C248T p.S83L . . . TRMT5 57570 broad.mit.edu 36 14 60512294 60512294 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020810 exon4 c.G1096T p.E366X . . . TRMT5 57570 broad.mit.edu 36 14 60515734 60515734 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020810 exon2 c.G635A p.R212Q . . . SNAPC1 6617 broad.mit.edu 36 14 61314579 61314579 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003082 exon6 c.G730T p.E244X . . . SNAPC1 6617 broad.mit.edu 36 14 61315339 61315339 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003082 exon7 c.A783G p.S261S . . . RHOJ 57381 broad.mit.edu 36 14 62827351 62827351 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020663 exon5 c.C501T p.I167I . . . SYNE2 23224 broad.mit.edu 36 14 63517196 63517196 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon15 c.G1641T p.K547N . . . SYNE2 23224 broad.mit.edu 36 14 63564241 63564241 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon43 c.G6691A p.E2231K . . . SYNE2 23224 broad.mit.edu 36 14 63588616 63588616 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon48 c.G8232T p.K2744N . . . SYNE2 23224 broad.mit.edu 36 14 63589693 63589693 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon48 c.G9309T p.K3103N . . . ESR2 2100 broad.mit.edu 36 14 63816527 63816527 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001437 exon3 c.G460A p.D154N . . . AKAP5 9495 broad.mit.edu 36 14 64005700 64005700 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004857 exon2 c.G835T p.E279X . . . AKAP5 9495 broad.mit.edu 36 14 64005805 64005805 + Nonsense_Mutation SNP G T T rs34433837 byCluster;byFrequency TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004857 exon2 c.G940T p.E314X . . . SPTB 6710 broad.mit.edu 36 14 64322312 64322312 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001024858 exon16 c.C3672A p.V1224V . . . PLEK2 26499 broad.mit.edu 36 14 66929689 66929689 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016445 exon4 c.G412A p.D138N . . . ARG2 384 broad.mit.edu 36 14 67178679 67178679 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172 exon3 c.G208T p.D70Y . . . ZFYVE26 23503 broad.mit.edu 36 14 67319517 67319517 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015346 exon21 c.T4105G p.F1369V . . . ZFYVE26 23503 broad.mit.edu 36 14 67338614 67338614 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015346 exon10 c.A1574G p.K525R . . . EXD2 55218 broad.mit.edu 36 14 68765328 68765328 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193363 exon3 c.A376C p.M126L . . . SLC8A3 6547 broad.mit.edu 36 14 69703549 69703549 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033262 exon2 c.C1344T p.F448F . . . ADAM21 8747 broad.mit.edu 36 14 69994776 69994776 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003813 exon1 c.G807T p.M269I . . . ADAM21 8747 broad.mit.edu 36 14 69994874 69994874 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003813 exon1 c.C905A p.S302X . . . ADAM20 8748 broad.mit.edu 36 14 70060037 70060037 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003814 exon2 c.G1341A p.P447P . . . SIPA1L1 26037 broad.mit.edu 36 14 71221915 71221915 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015556 exon10 c.G3188A p.R1063Q . . . PSEN1 5663 broad.mit.edu 36 14 72729293 72729293 + Missense_Mutation SNP C T T rs63750526 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000021 exon7 c.C737T p.A246V . . . ZNF410 57862 broad.mit.edu 36 14 73434696 73434696 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021188 exon5 c.G558T p.K186N . . . COQ6 51004 broad.mit.edu 36 14 73494656 73494656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182476 exon5 c.C535T p.P179S . . . VSX2 338917 broad.mit.edu 36 14 73796077 73796077 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_182894 exon4 c.G599A p.R200Q . . . VRTN 55237 broad.mit.edu 36 14 73893820 73893820 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018228 exon2 c.G581A p.R194H . . . FAM164C 79696 broad.mit.edu 36 14 74608066 74608066 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024643 exon2 c.C1037T p.S346L . . . NEK9 91754 broad.mit.edu 36 14 74627731 74627731 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033116 exon19 c.C2437T p.R813X . . . C14orf1 11161 broad.mit.edu 36 14 75191016 75191016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007176 exon3 c.C190T p.R64C . . . C14orf179 112752 broad.mit.edu 36 14 75558488 75558488 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102564 exon3 c.G213A p.S71S . . . C14orf179 112752 broad.mit.edu 36 14 75612694 75612694 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052873 exon4 c.G217A p.G73S . . . TMED8 283578 broad.mit.edu 36 14 76879357 76879357 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213601 exon5 c.T677C p.V226A . . . VIPAR 63894 broad.mit.edu 36 14 76973920 76973920 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022067 exon13 c.C820A p.L274I . . . NRXN3 9369 broad.mit.edu 36 14 78251208 78251208 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004796 exon5 c.G898T p.G300X . . . C14orf145 145508 broad.mit.edu 36 14 80436077 80436077 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152446 exon6 c.G530A p.R177H . . . TSHR 7253 broad.mit.edu 36 14 80675914 80675914 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000369 exon9 c.T831G p.L277L . . . TSHR 7253 broad.mit.edu 36 14 80679256 80679256 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000369 exon10 c.C1101T p.G367G . . . STON2 85439 broad.mit.edu 36 14 80932020 80932020 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033104 exon2 c.C344T p.S115F . . . FLRT2 23768 broad.mit.edu 36 14 85157738 85157738 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013231 exon2 c.G127A p.D43N . . . GPR65 8477 broad.mit.edu 36 14 87547718 87547718 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003608 exon2 c.C774T p.F258F . . . KCNK10 54207 broad.mit.edu 36 14 87862529 87862529 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021161 exon1 c.C24A p.F8L . . . ZC3H14 79882 broad.mit.edu 36 14 88112004 88112004 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001160104 exon8 c.G1090T p.E364X . . . C14orf102 55051 broad.mit.edu 36 14 89838929 89838929 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017970 exon6 c.G1299A p.S433S . . . TTC7B 145567 broad.mit.edu 36 14 90225695 90225695 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001010854 exon7 c.G892A p.G298R . . . RPS6KA5 9252 broad.mit.edu 36 14 90483546 90483546 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004755 exon4 c.G496A p.E166K . . . CATSPERB 79820 broad.mit.edu 36 14 91244241 91244241 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024764 exon6 c.C463T p.R155X . . . TC2N 123036 broad.mit.edu 36 14 91321315 91321315 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128596 exon11 c.T1306G p.F436V . . . FBLN5 10516 broad.mit.edu 36 14 91419166 91419166 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006329 exon8 c.C747T p.D249D . . . TRIP11 9321 broad.mit.edu 36 14 91540565 91540565 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004239 exon11 c.G3508T p.D1170Y . . . RIN3 79890 broad.mit.edu 36 14 92195355 92195355 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024832 exon7 c.C2123T p.S708L . . . KIAA1409 57578 broad.mit.edu 36 14 93158892 93158892 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon30 c.G5029A p.D1677N . . . KIAA1409 57578 broad.mit.edu 36 14 93179681 93179681 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon35 c.G5515T p.E1839X . . . KIAA1409 57578 broad.mit.edu 36 14 93190067 93190067 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon38 c.G5811A p.S1937S . . . KIAA1409 57578 broad.mit.edu 36 14 93209456 93209456 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon42 c.G6229T p.D2077Y . . . FAM181A 90050 broad.mit.edu 36 14 93464423 93464423 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138344 exon3 c.C225T p.F75F . . . PPP4R4 57718 broad.mit.edu 36 14 93744629 93744629 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020958 exon3 c.G267A p.T89T . . . PPP4R4 57718 broad.mit.edu 36 14 93770713 93770713 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058237 exon7 c.C685T p.R229X . . . PPP4R4 57718 broad.mit.edu 36 14 93795426 93795426 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_058237 exon19 c.G2094T p.E698D . . . SERPINA11 256394 broad.mit.edu 36 14 93984524 93984524 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080451 exon2 c.A341G p.D114G . . . SERPINA5 5104 broad.mit.edu 36 14 94123992 94123992 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000624 exon3 c.G540A p.T180T . . . CLMN 79789 broad.mit.edu 36 14 94749314 94749314 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024734 exon6 c.G603A p.T201T . . . ATG2B 55102 broad.mit.edu 36 14 95861748 95861748 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018036 exon15 c.G2428T p.E810X . . . AK7 122481 broad.mit.edu 36 14 95944991 95944991 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152327 exon4 c.C458T p.S153L . . . AK7 122481 broad.mit.edu 36 14 95994221 95994221 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152327 exon12 c.G1276A p.E426K . . . AK7 122481 broad.mit.edu 36 14 96023055 96023055 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152327 exon17 c.G2042A p.R681K . . . PAPOLA 10914 broad.mit.edu 36 14 96080254 96080254 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032632 exon15 c.G1305A p.T435T . . . SETD3 84193 broad.mit.edu 36 14 98995216 98995216 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032233 exon5 c.A405C p.K135N . . . EML1 2009 broad.mit.edu 36 14 99450747 99450747 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008707 exon16 c.A1769G p.D590G . . . WARS 7453 broad.mit.edu 36 14 99882864 99882864 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_173701 exon7 c.T798G p.I266M . . . TCL6 27004 broad.mit.edu 36 14 95207510 95207510 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . JMJD7-PLA2G4B 8681 broad.mit.edu 36 15 39916353 39916354 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001114632 exon7 c.785_786insT p.T262fs . . . OR4N4 283694 broad.mit.edu 36 15 19884620 19884620 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005241 exon1 c.T784G p.F262V . . . NIPA1 123606 broad.mit.edu 36 15 20600359 20600359 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142275 exon5 c.G676A p.V226I . . . MAGEL2 54551 broad.mit.edu 36 15 21440995 21440995 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019066 exon1 c.C2988T p.V996V . . . C15orf2 23742 broad.mit.edu 36 15 22472712 22472712 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018958 exon1 c.G605T p.R202I . . . C15orf2 23742 broad.mit.edu 36 15 22473476 22473476 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018958 exon1 c.A1369C p.T457P . . . C15orf2 23742 broad.mit.edu 36 15 22474120 22474120 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018958 exon1 c.C2013T p.P671P . . . ATP10A 57194 broad.mit.edu 36 15 23498337 23498337 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024490 exon13 c.C2579T p.A860V . . . GABRA5 2558 broad.mit.edu 36 15 24679438 24679438 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165037 exon5 c.G241A p.V81I . . . HERC2 8924 broad.mit.edu 36 15 26115020 26115020 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004667 exon52 c.T8196C p.C2732C . . . TJP1 7082 broad.mit.edu 36 15 27781133 27781133 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175610 exon27 c.C4965T p.L1655L . . . TJP1 7082 broad.mit.edu 36 15 27852813 27852813 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175610 exon3 c.C124T p.R42X . . . FAN1 22909 broad.mit.edu 36 15 28993433 28993433 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014967 exon5 c.C1658T p.S553L . . . FAN1 22909 broad.mit.edu 36 15 29008819 29008819 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014967 exon12 c.C2714T p.T905M . . . TRPM1 4308 broad.mit.edu 36 15 29081833 29081833 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002420 exon27 c.T4296C p.C1432C . . . TRPM1 4308 broad.mit.edu 36 15 29082295 29082295 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002420 exon27 c.C3834T p.N1278N . . . FMN1 342184 broad.mit.edu 36 15 31146187 31146187 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103184 exon1 c.G1191A p.S397S . . . RYR3 6263 broad.mit.edu 36 15 31775847 31775847 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon39 c.G5997A p.A1999A . . . RYR3 6263 broad.mit.edu 36 15 31827608 31827608 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon54 c.A7991C p.E2664A . . . RYR3 6263 broad.mit.edu 36 15 31827731 31827731 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon54 c.G8114A p.R2705Q . . . RYR3 6263 broad.mit.edu 36 15 31917548 31917548 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon89 c.C12075T p.F4025F . . . RYR3 6263 broad.mit.edu 36 15 31937396 31937396 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon99 c.G14131A p.D4711N . . . PGBD4 161779 broad.mit.edu 36 15 32182628 32182628 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152595 exon1 c.C604T p.R202W . . . ZNF770 54989 broad.mit.edu 36 15 33061607 33061607 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014106 exon3 c.T1321C p.S441P . . . MEIS2 4212 broad.mit.edu 36 15 34976148 34976148 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170676 exon10 c.C1009T p.P337S . . . RASGRP1 10125 broad.mit.edu 36 15 36574031 36574031 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005739 exon16 c.T2103C p.D701D . . . C15orf23 90417 broad.mit.edu 36 15 38472976 38472976 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033286 exon9 c.G837A p.K279K . . . BAHD1 22893 broad.mit.edu 36 15 38538413 38538413 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014952 exon2 c.G458T p.R153L . . . RTF1 23168 broad.mit.edu 36 15 39554177 39554177 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015138 exon9 c.A1271T p.K424I . . . MGA 23269 broad.mit.edu 36 15 39828366 39828366 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164273 exon16 c.C5452T p.R1818X . . . MAPKBP1 23005 broad.mit.edu 36 15 39897738 39897738 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014994 exon18 c.C2035A p.L679I . . . GANC 2595 broad.mit.edu 36 15 40406916 40406916 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198141 exon13 c.C1484T p.A495V . . . CAPN3 825 broad.mit.edu 36 15 40490136 40490136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173089 exon6 c.G248A p.R83Q . . . UBR1 197131 broad.mit.edu 36 15 41082118 41082118 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_174916 exon32 c.C3586T p.L1196F . . . TGM7 116179 broad.mit.edu 36 15 41356442 41356442 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052955 exon12 c.T1883C p.V628A . . . ZSCAN29 146050 broad.mit.edu 36 15 41448564 41448564 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152455 exon2 c.G372A p.P124P . . . TP53BP1 7158 broad.mit.edu 36 15 41495155 41495155 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005657 exon23 c.G5003T p.R1668I . . . TP53BP1 7158 broad.mit.edu 36 15 41517844 41517844 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005657 exon16 c.G3146A p.R1049Q . . . SPG11 80208 broad.mit.edu 36 15 42677816 42677816 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025137 exon23 c.G3940T p.E1314X . . . TRIM69 140691 broad.mit.edu 36 15 42846900 42846900 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182985 exon7 c.G1141A p.E381K . . . DUOX2 50506 broad.mit.edu 36 15 43187582 43187582 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014080 exon13 c.G1529A p.R510Q . . . FBN1 2200 broad.mit.edu 36 15 46504945 46504945 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000138 exon60 c.A7366G p.N2456D . . . FBN1 2200 broad.mit.edu 36 15 46547558 46547558 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000138 exon38 c.G4616A p.R1539Q . . . FBN1 2200 broad.mit.edu 36 15 46589587 46589587 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000138 exon14 c.C1660A p.H554N . . . FBN1 2200 broad.mit.edu 36 15 46593079 46593079 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000138 exon13 c.G1547A p.R516Q . . . CEP152 22995 broad.mit.edu 36 15 46835992 46835992 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194998 exon20 c.A2745C p.E915D . . . CEP152 22995 broad.mit.edu 36 15 46868326 46868326 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194998 exon9 c.G1137T p.K379N . . . C15orf33 196951 broad.mit.edu 36 15 47450883 47450883 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152647 exon12 c.G1018A p.D340N . . . C15orf33 196951 broad.mit.edu 36 15 47621233 47621233 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152647 exon10 c.G810A p.S270S . . . ATP8B4 79895 broad.mit.edu 36 15 47976815 47976815 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024837 exon23 c.T2663G p.F888C . . . ATP8B4 79895 broad.mit.edu 36 15 48010726 48010726 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024837 exon16 c.C1524A p.F508L . . . HDC 3067 broad.mit.edu 36 15 48332234 48332234 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002112 exon8 c.G817A p.D273N . . . TRPM7 54822 broad.mit.edu 36 15 48671700 48671700 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017672 exon26 c.G4024T p.E1342X . . . TRPM7 54822 broad.mit.edu 36 15 48728211 48728211 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017672 exon4 c.A286C p.N96H . . . SPPL2A 84888 broad.mit.edu 36 15 48819272 48819272 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032802 exon6 c.A630C p.K210N . . . AP4E1 23431 broad.mit.edu 36 15 49078746 49078746 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007347 exon19 c.C3090A p.F1030L . . . TNFAIP8L3 388121 broad.mit.edu 36 15 49137721 49137721 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207381 exon3 c.C528T p.I176I . . . DMXL2 23312 broad.mit.edu 36 15 49553997 49553997 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon28 c.T7046C p.V2349A . . . DMXL2 23312 broad.mit.edu 36 15 49560218 49560218 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon24 c.G6377A p.R2126H . . . DMXL2 23312 broad.mit.edu 36 15 49571094 49571094 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon20 c.T4926G p.I1642M . . . DMXL2 23312 broad.mit.edu 36 15 49571181 49571181 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015263 exon20 c.G4839T p.L1613L . . . SCG3 29106 broad.mit.edu 36 15 49780613 49780613 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013243 exon10 c.C1087A p.H363N . . . LEO1 123169 broad.mit.edu 36 15 50045578 50045578 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138792 exon2 c.G474T p.K158N . . . MYO5C 55930 broad.mit.edu 36 15 50323981 50323981 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018728 exon19 c.C2254T p.R752X . . . MYO5A 4644 broad.mit.edu 36 15 50468786 50468786 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000259 exon13 c.C1609A p.L537I . . . MYO5A 4644 broad.mit.edu 36 15 50489881 50489881 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000259 exon6 c.C697T p.R233X . . . WDR72 256764 broad.mit.edu 36 15 51695586 51695586 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182758 exon15 c.T2109G p.S703S . . . WDR72 256764 broad.mit.edu 36 15 51779390 51779390 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182758 exon13 c.C1614T p.S538S . . . UNC13C 440279 broad.mit.edu 36 15 52094177 52094177 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon1 c.G1785A p.A595A . . . UNC13C 440279 broad.mit.edu 36 15 52094893 52094893 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080534 exon1 c.G2501A p.R834Q . . . UNC13C 440279 broad.mit.edu 36 15 52095237 52095237 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon1 c.G2845T p.E949X . . . UNC13C 440279 broad.mit.edu 36 15 52095345 52095345 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon1 c.G2953C p.A985P . . . PIGB 9488 broad.mit.edu 36 15 53420186 53420186 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004855 exon8 c.T931C p.Y311H . . . CCPG1 9236 broad.mit.edu 36 15 53457834 53457834 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004748 exon4 c.G208T p.E70X . . . PYGO1 26108 broad.mit.edu 36 15 53625577 53625577 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015617 exon3 c.A1196C p.K399T . . . PRTG 283659 broad.mit.edu 36 15 53752868 53752868 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173814 exon10 c.C1845T p.S615S . . . PRTG 283659 broad.mit.edu 36 15 53753130 53753130 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173814 exon10 c.G1583A p.R528Q . . . NEDD4 4734 broad.mit.edu 36 15 53942546 53942546 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006154 exon9 c.A531G p.Q177Q . . . NEDD4 4734 broad.mit.edu 36 15 53995673 53995673 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198400 exon1 c.C649T p.P217S . . . GCOM1 145781 broad.mit.edu 36 15 55719030 55719030 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152451 exon10 c.G1114A p.E372K . . . LIPC 3990 broad.mit.edu 36 15 56617867 56617867 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000236 exon2 c.G132A p.T44T . . . CCNB2 9133 broad.mit.edu 36 15 57204336 57204336 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004701 exon9 c.G1165A p.D389N . . . ANXA2 302 broad.mit.edu 36 15 58465551 58465551 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002858 exon2 c.G70A p.E24K . . . VPS13C 54832 broad.mit.edu 36 15 60038189 60038189 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017684 exon35 c.G3946T p.D1316Y . . . RPS27L 51065 broad.mit.edu 36 15 61234936 61234936 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015920 exon3 c.C163A p.L55I . . . USP3 9960 broad.mit.edu 36 15 61667630 61667630 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006537 exon12 c.G1170T p.K390N . . . HERC1 8925 broad.mit.edu 36 15 61691506 61691506 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003922 exon77 c.T14397C p.D4799D . . . HERC1 8925 broad.mit.edu 36 15 61771792 61771792 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003922 exon31 c.G5701A p.E1901K HERC1,lung,NS,Substitution - Nonsense,0 . . HERC1 8925 broad.mit.edu 36 15 61832337 61832337 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003922 exon8 c.G1775A p.G592D . . . DAPK2 23604 broad.mit.edu 36 15 62018497 62018497 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014326 exon5 c.G570A p.T190T . . . TRIP4 9325 broad.mit.edu 36 15 62473291 62473291 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016213 exon2 c.A195C p.E65D . . . PLEKHO2 80301 broad.mit.edu 36 15 62944414 62944414 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001195059 exon5 c.G597T p.E199D . . . MTFMT 123263 broad.mit.edu 36 15 63082629 63082629 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139242 exon9 c.C994T p.R332X . . . CILP 8483 broad.mit.edu 36 15 63284715 63284715 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_003613 exon5 c.C567T p.S189S . . . IGDCC3 9543 broad.mit.edu 36 15 63414769 63414769 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004884 exon4 c.C598T p.R200X . . . DENND4A 10260 broad.mit.edu 36 15 63770365 63770365 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144823 exon23 c.C3618T p.V1206V . . . DENND4A 10260 broad.mit.edu 36 15 63770655 63770655 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144823 exon23 c.C3328A p.L1110I . . . DENND4A 10260 broad.mit.edu 36 15 63781222 63781222 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144823 exon18 c.C2491T p.R831X . . . DENND4A 10260 broad.mit.edu 36 15 63794943 63794943 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001144823 exon14 c.G1880A p.R627H . . . DENND4A 10260 broad.mit.edu 36 15 63835716 63835716 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144823 exon3 c.G127T p.E43X . . . ZWILCH 55055 broad.mit.edu 36 15 64594936 64594936 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017975 exon4 c.A220G p.T74A . . . CORO2B 10391 broad.mit.edu 36 15 66793975 66793975 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006091 exon7 c.C789T p.I263I . . . UACA 55075 broad.mit.edu 36 15 68746152 68746152 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018003 exon16 c.G3925T p.E1309X . . . UACA 55075 broad.mit.edu 36 15 68762183 68762183 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018003 exon9 c.G790T p.E264X . . . UACA 55075 broad.mit.edu 36 15 68763817 68763817 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018003 exon8 c.G625A p.E209K . . . NR2E3 10002 broad.mit.edu 36 15 69897005 69897005 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014249 exon8 c.G1160A p.R387Q . . . MYO9A 4649 broad.mit.edu 36 15 69978022 69978022 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006901 exon25 c.T3876C p.V1292V . . . MYO9A 4649 broad.mit.edu 36 15 69978248 69978248 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006901 exon25 c.G3650A p.R1217Q . . . MYO9A 4649 broad.mit.edu 36 15 70107175 70107175 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006901 exon4 c.A949C p.K317Q . . . CELF6 60677 broad.mit.edu 36 15 70367841 70367841 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172684 exon10 c.G1099A p.E367K . . . TMEM202 338949 broad.mit.edu 36 15 70487092 70487092 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080462 exon5 c.T626A p.I209N . . . NEO1 4756 broad.mit.edu 36 15 71205923 71205923 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172623 exon4 c.C837A p.T279T . . . NEO1 4756 broad.mit.edu 36 15 71315823 71315823 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172623 exon8 c.G1374A p.T458T . . . NEO1 4756 broad.mit.edu 36 15 71377750 71377750 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172623 exon26 c.C3751T p.R1251X . . . HCN4 10021 broad.mit.edu 36 15 71408983 71408983 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005477 exon4 c.G1574A p.R525H . . . TBC1D21 161514 broad.mit.edu 36 15 71960823 71960823 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153356 exon2 c.G91T p.E31X . . . ISLR2 57611 broad.mit.edu 36 15 72212572 72212572 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020851 exon3 c.G424A p.A142T . . . ARID3B 10620 broad.mit.edu 36 15 72623410 72623410 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006465 exon2 c.C80T p.A27V . . . NEIL1 79661 broad.mit.edu 36 15 73434198 73434198 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024608 exon9 c.G1088A p.R363Q . . . MAN2C1 4123 broad.mit.edu 36 15 73437698 73437698 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006715 exon21 c.T2444C p.F815S . . . SIN3A 25942 broad.mit.edu 36 15 73475669 73475669 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145358 exon13 c.T2076C p.V692V . . . SNUPN 10073 broad.mit.edu 36 15 73689036 73689036 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042581 exon5 c.T420C p.S140S . . . SCAPER 49855 broad.mit.edu 36 15 74455600 74455600 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145923 exon29 c.C3075T p.I1025I . . . SCAPER 49855 broad.mit.edu 36 15 74550729 74550729 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145923 exon25 c.C2219A p.S740Y . . . TBC1D2B 23102 broad.mit.edu 36 15 76133470 76133470 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144572 exon2 c.G475A p.G159R . . . ACSBG1 23205 broad.mit.edu 36 15 76313784 76313784 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199377 exon1 c.G115T p.E39X . . . WDR61 80349 broad.mit.edu 36 15 76364734 76364734 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025234 exon10 c.C752T p.S251L . . . CTSH 1512 broad.mit.edu 36 15 77002432 77002432 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_004390 exon11 c.G890A p.W297X . . . RASGRF1 5923 broad.mit.edu 36 15 77071141 77071141 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002891 exon22 c.C3126T p.I1042I . . . KIAA1024 23251 broad.mit.edu 36 15 77536529 77536529 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015206 exon2 c.G985A p.E329K . . . KIAA1024 23251 broad.mit.edu 36 15 77537212 77537213 + Missense_Mutation DNP CG TA TA novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015206 exon2 c.1668_1669TA . . . . FAM108C1 58489 broad.mit.edu 36 15 78833749 78833749 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021214 exon3 c.G973A p.E325K . . . KIAA1199 57214 broad.mit.edu 36 15 79008312 79008312 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018689 exon19 c.G2435A p.G812D . . . IL16 3603 broad.mit.edu 36 15 79359159 79359159 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172128 exon8 c.C1070A p.S357Y . . . IL16 3603 broad.mit.edu 36 15 79365185 79365185 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001172128 exon10 c.G1291A p.G431S . . . FAM154B 283726 broad.mit.edu 36 15 80351001 80351001 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008226 exon2 c.C56T p.S19L . . . FSD2 123722 broad.mit.edu 36 15 81253092 81253092 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007122 exon2 c.C105A p.L35L . . . BTBD1 53339 broad.mit.edu 36 15 81489898 81489898 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025238 exon5 c.G1049A p.R350Q . . . BNC1 646 broad.mit.edu 36 15 81722929 81722929 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001717 exon4 c.C2078T p.A693V . . . ZNF592 9640 broad.mit.edu 36 15 83128066 83128066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014630 exon4 c.G1156A p.E386K . . . SLC28A1 9154 broad.mit.edu 36 15 83279331 83279331 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004213 exon14 c.G1285A p.A429T . . . ACAN 176 broad.mit.edu 36 15 87202137 87202137 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135 exon12 c.C5317A p.L1773I . . . ABHD2 11057 broad.mit.edu 36 15 87532526 87532526 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152924 exon8 c.A914G p.D305G . . . RHCG 51458 broad.mit.edu 36 15 87821353 87821353 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016321 exon8 c.A1201G p.T401A . . . WDR93 56964 broad.mit.edu 36 15 88046136 88046136 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020212 exon2 c.C155A p.S52Y . . . ZNF774 342132 broad.mit.edu 36 15 88704829 88704829 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004309 exon4 c.A762G p.Q254Q . . . IQGAP1 8826 broad.mit.edu 36 15 88839061 88839061 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003870 exon36 c.C4741A p.Q1581K . . . BLM 641 broad.mit.edu 36 15 89147827 89147827 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000057 exon18 c.G3431T p.R1144I . . . MAN2A2 4122 broad.mit.edu 36 15 89251655 89251655 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006122 exon7 c.C1122A p.R374R . . . PRC1 9055 broad.mit.edu 36 15 89318425 89318425 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003981 exon11 c.G1406A p.R469Q . . . PRC1 9055 broad.mit.edu 36 15 89328977 89328977 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003981 exon2 c.C94T p.P32S . . . VPS33B 26276 broad.mit.edu 36 15 89344791 89344791 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018668 exon20 c.T1514C p.V505A . . . SV2B 9899 broad.mit.edu 36 15 89604631 89604631 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014848 exon7 c.G996T p.E332D . . . SLCO3A1 28232 broad.mit.edu 36 15 90464828 90464828 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013272 exon5 c.T1139G p.F380C . . . ST8SIA2 8128 broad.mit.edu 36 15 90782827 90782827 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006011 exon4 c.C531T p.A177A . . . MCTP2 55784 broad.mit.edu 36 15 92642635 92642635 + Missense_Mutation SNP G A A rs61735139 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159643 exon1 c.G137A p.R46H . . . MCTP2 55784 broad.mit.edu 36 15 92683599 92683599 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159643 exon4 c.G714A p.L238L . . . MCTP2 55784 broad.mit.edu 36 15 92714356 92714356 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159643 exon11 c.G1525A p.G509S . . . MCTP2 55784 broad.mit.edu 36 15 92814642 92814642 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159643 exon18 c.T2272G p.F758V . . . FAM169B 283777 broad.mit.edu 36 15 96841462 96841462 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182562 exon4 c.G74T p.R25I . . . MEF2A 4205 broad.mit.edu 36 15 98003346 98003346 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005587 exon4 c.C112T p.L38F . . . MEF2A 4205 broad.mit.edu 36 15 98029164 98029164 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171894 exon6 c.T372G p.F124L . . . CHSY1 22856 broad.mit.edu 36 15 99535635 99535635 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014918 exon3 c.C1890T p.C630C . . . GLYR1 84656 broad.mit.edu 36 16 4795293 4795294 + Frame_Shift_Ins INS - C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032569 exon16 c.1607_1608insG p.A536fs . . . NUBP1 4682 broad.mit.edu 36 16 10762814 10762814 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002484 exon8 c.C699T p.F233F . . . TXNDC11 51061 broad.mit.edu 36 16 11699485 11699485 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015914 exon7 c.C1104T p.D368D . . . TXNDC11 51061 broad.mit.edu 36 16 11699599 11699599 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015914 exon7 c.G990T p.W330C . . . RUNDC2A 84127 broad.mit.edu 36 16 12044380 12044380 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032167 exon5 c.G373A p.E125K . . . PARN 5073 broad.mit.edu 36 16 14618977 14618977 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002582 exon6 c.G359A p.G120E . . . NOMO1 23420 broad.mit.edu 36 16 14881419 14881419 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014287 exon24 c.T2804G p.F935C . . . NTAN1 123803 broad.mit.edu 36 16 15049230 15049230 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173474 exon3 c.T233G p.V78G . . . KIAA0430 9665 broad.mit.edu 36 16 15626521 15626521 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184999 exon9 c.G1955A p.R652H . . . IFT140 9742 broad.mit.edu 36 16 1582287 1582287 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014714 exon6 c.C525T p.S175S . . . C16orf63 123811 broad.mit.edu 36 16 15874860 15874860 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144600 exon4 c.G437T p.R146I . . . NOMO2 283820 broad.mit.edu 36 16 18457478 18457478 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004060 exon11 c.C1091A p.S364X . . . SMG1 23049 broad.mit.edu 36 16 18734277 18734277 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015092 exon59 c.A10500C p.K3500N . . . SMG1 23049 broad.mit.edu 36 16 18749156 18749156 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015092 exon52 c.G8829A p.P2943P . . . SMG1 23049 broad.mit.edu 36 16 18755198 18755198 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015092 exon47 c.A7762G p.T2588A . . . SMG1 23049 broad.mit.edu 36 16 18782618 18782618 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015092 exon25 c.A3550C p.N1184H . . . SMG1 23049 broad.mit.edu 36 16 18789484 18789484 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015092 exon18 c.G2441A p.R814Q . . . GPRC5B 51704 broad.mit.edu 36 16 19790823 19790823 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016235 exon2 c.C846A p.V282V . . . GP2 2813 broad.mit.edu 36 16 20237178 20237178 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007242 exon6 c.G642T p.T214T . . . GP2 2813 broad.mit.edu 36 16 20243052 20243052 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001502 exon3 c.C122T p.S41L . . . UMOD 7369 broad.mit.edu 36 16 20256214 20256214 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003361 exon8 c.G1640A p.R547Q . . . ACSM2B 348158 broad.mit.edu 36 16 20474123 20474123 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001105069 exon4 c.G565A p.D189N . . . ACSM1 116285 broad.mit.edu 36 16 20590441 20590441 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052956 exon4 c.T665C p.V222A . . . THUMPD1 55623 broad.mit.edu 36 16 20656741 20656741 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017736 exon3 c.T445C p.Y149H . . . LOC81691 81691 broad.mit.edu 36 16 20768299 20768299 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199053 exon20 c.C2321T p.S774L . . . DNAH3 55567 broad.mit.edu 36 16 20958715 20958715 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017539 exon33 c.G4690T p.E1564X . . . DNAH3 55567 broad.mit.edu 36 16 21016313 21016313 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017539 exon18 c.T2529C p.N843N . . . VWA3A 146177 broad.mit.edu 36 16 22040379 22040379 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173615 exon14 c.C1296A p.F432L . . . USP31 57478 broad.mit.edu 36 16 23003761 23003761 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020718 exon11 c.G1751A p.R584H . . . GGA2 23062 broad.mit.edu 36 16 23412208 23412208 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015044 exon4 c.G325A p.E109K . . . PLK1 5347 broad.mit.edu 36 16 23599856 23599856 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005030 exon3 c.A698G p.D233G . . . TNRC6A 27327 broad.mit.edu 36 16 24708513 24708513 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014494 exon6 c.C1049A p.S350Y . . . TNRC6A 27327 broad.mit.edu 36 16 24710148 24710148 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014494 exon6 c.C2684T p.S895F . . . LCMT1 51451 broad.mit.edu 36 16 25083523 25083523 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016309 exon7 c.T673C p.F225L . . . ZKSCAN2 342357 broad.mit.edu 36 16 25159369 25159369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012981 exon7 c.C2173T p.P725S . . . ZKSCAN2 342357 broad.mit.edu 36 16 25162884 25162884 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012981 exon6 c.C1704T p.H568H . . . KIAA0556 23247 broad.mit.edu 36 16 27640446 27640446 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015202 exon14 c.C1672T p.R558X . . . KIAA0556 23247 broad.mit.edu 36 16 27669026 27669026 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015202 exon16 c.C3244T p.R1082W . . . ATXN2L 11273 broad.mit.edu 36 16 28744201 28744201 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148415 exon2 c.G313T p.G105X . . . SEZ6L2 26470 broad.mit.edu 36 16 29798814 29798814 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001114100 exon7 c.G1103T p.R368L . . . SEPHS2 22928 broad.mit.edu 36 16 30363310 30363310 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012248 exon1 c.G1240A p.A414T . . . SEPHS2 22928 broad.mit.edu 36 16 30363842 30363842 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012248 exon1 c.C708A p.F236L . . . SRCAP 10847 broad.mit.edu 36 16 30632143 30632143 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006662 exon15 c.G2244A p.A748A . . . HSD3B7 80270 broad.mit.edu 36 16 30905434 30905434 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025193 exon5 c.G439A p.E147K . . . ZNF267 10308 broad.mit.edu 36 16 31834858 31834858 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon4 c.G1787A p.R596Q . . . ZNF267 10308 broad.mit.edu 36 16 31834938 31834938 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon4 c.C1867T p.R623W . . . OR1F1 4992 broad.mit.edu 36 16 3194785 3194785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012360 exon1 c.G538A p.D180N . . . ZNF434 54925 broad.mit.edu 36 16 3372998 3372998 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017810 exon6 c.C1313T p.A438V . . . ZNF434 54925 broad.mit.edu 36 16 3374775 3374775 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017810 exon5 c.C283T p.R95C . . . ZNF174 7727 broad.mit.edu 36 16 3398870 3398870 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003450 exon3 c.C1174T p.R392C . . . SRL 6345 broad.mit.edu 36 16 4182187 4182187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098814 exon6 c.G1390A p.E464K . . . MYLK3 91807 broad.mit.edu 36 16 45300956 45300956 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182493 exon12 c.G2396T p.W799L . . . PHKB 5257 broad.mit.edu 36 16 46094405 46094405 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031835 exon5 c.G287A p.R96Q . . . ABCC12 94160 broad.mit.edu 36 16 46729729 46729729 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033226 exon6 c.A890C p.K297T . . . LONP2 83752 broad.mit.edu 36 16 46887499 46887499 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031490 exon9 c.C1456A p.L486I . . . C16orf78 123970 broad.mit.edu 36 16 47988068 47988068 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144602 exon4 c.C628T p.P210S . . . ZNF423 23090 broad.mit.edu 36 16 48228797 48228797 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015069 exon5 c.G1767T p.K589N . . . UBN1 29855 broad.mit.edu 36 16 4849935 4849935 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016936 exon5 c.G636T p.E212D . . . HEATR3 55027 broad.mit.edu 36 16 48686145 48686145 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182922 exon12 c.A1539C p.E513D . . . HEATR3 55027 broad.mit.edu 36 16 48693736 48693736 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182922 exon14 c.T1809G p.A603A . . . PPL 5493 broad.mit.edu 36 16 4874952 4874952 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002705 exon22 c.C3705A p.V1235V . . . PAPD5 64282 broad.mit.edu 36 16 48814648 48814648 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001040284 exon8 c.T1185G p.F395L . . . NKD1 85407 broad.mit.edu 36 16 49224660 49224660 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033119 exon10 c.C880T p.R294X . . . SNX20 124460 broad.mit.edu 36 16 49265406 49265406 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182854 exon4 c.G363A p.A121A . . . SALL1 6299 broad.mit.edu 36 16 49730929 49730929 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002968 exon2 c.C2705A p.S902X . . . SALL1 6299 broad.mit.edu 36 16 49733483 49733483 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002968 exon2 c.G151A p.E51K . . . CHD9 80205 broad.mit.edu 36 16 51915730 51915730 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025134 exon39 c.A8068C p.N2690H . . . RPGRIP1L 23322 broad.mit.edu 36 16 52243974 52243974 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127897 exon15 c.G2126A p.R709Q . . . CAPNS2 84290 broad.mit.edu 36 16 54158408 54158408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032330 exon1 c.G239A p.R80Q . . . CES1 1066 broad.mit.edu 36 16 54417655 54417655 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001266 exon3 c.G311A p.R104Q . . . AMFR 267 broad.mit.edu 36 16 54960631 54960631 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144 exon11 c.G1490A p.R497Q . . . BBS2 583 broad.mit.edu 36 16 55094202 55094202 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031885 exon8 c.G824A p.R275Q . . . FAM192A 80011 broad.mit.edu 36 16 55763701 55763701 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024946 exon4 c.G311A p.R104Q . . . CNOT1 23019 broad.mit.edu 36 16 57116684 57116684 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016284 exon46 c.G6684A p.A2228A . . . CDH8 1006 broad.mit.edu 36 16 60245250 60245250 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001796 exon12 c.C2163T p.V721V . . . CDH8 1006 broad.mit.edu 36 16 60412405 60412405 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001796 exon6 c.G949A p.D317N . . . CDH11 1009 broad.mit.edu 36 16 63590094 63590094 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001797 exon4 c.A395G p.D132G . . . CDH16 1014 broad.mit.edu 36 16 65501790 65501790 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004062 exon15 c.G2041T p.D681Y . . . CBFB 865 broad.mit.edu 36 16 65673671 65673671 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001755 exon5 c.G454A p.E152K . . . CBFB 865 broad.mit.edu 36 16 65690129 65690129 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001755 exon6 c.G542T p.R181I . . . LRRC36 55282 broad.mit.edu 36 16 65941648 65941648 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018296 exon5 c.C531T p.S177S . . . LRRC36 55282 broad.mit.edu 36 16 65962403 65962403 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018296 exon9 c.G1251A p.E417E . . . GFOD2 81577 broad.mit.edu 36 16 66267304 66267304 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030819 exon3 c.C413T p.S138L . . . DPEP2 64174 broad.mit.edu 36 16 66583249 66583249 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_022355 exon5 c.A655C p.T219P . . . PLA2G15 23659 broad.mit.edu 36 16 66850906 66850906 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_012320 exon6 c.A1084G p.T362A . . . SMPD3 55512 broad.mit.edu 36 16 66962458 66962458 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018667 exon3 c.G1128T p.E376D . . . ZFP90 146198 broad.mit.edu 36 16 67155180 67155180 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133458 exon4 c.G989A p.R330Q . . . CDH3 1001 broad.mit.edu 36 16 67278966 67278966 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001793 exon12 c.G1621A p.V541I . . . CDH1 999 broad.mit.edu 36 16 67403126 67403126 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004360 exon7 c.G871A p.D291N . . . COG4 25839 broad.mit.edu 36 16 69103746 69103746 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015386 exon5 c.A635C p.K212T . . . HYDIN 54768 broad.mit.edu 36 16 69457644 69457644 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon67 c.C11397T p.F3799F . . . HYDIN 54768 broad.mit.edu 36 16 69465935 69465935 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon64 c.C10719T p.V3573V . . . HYDIN 54768 broad.mit.edu 36 16 69495045 69495045 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon52 c.C8830T p.R2944W . . . HYDIN 54768 broad.mit.edu 36 16 69543917 69543917 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon41 c.C6436T p.R2146C . . . HYDIN 54768 broad.mit.edu 36 16 69565684 69565684 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032821 exon33 c.C4927T p.R1643C . . . HYDIN 54768 broad.mit.edu 36 16 69579402 69579402 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon27 c.G4117A p.E1373K . . . HYDIN 54768 broad.mit.edu 36 16 69582760 69582760 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon25 c.G3826T p.E1276X . . . HYDIN 54768 broad.mit.edu 36 16 69609618 69609618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon23 c.C3559T p.R1187C . . . HYDIN 54768 broad.mit.edu 36 16 69660867 69660867 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon14 c.C1778A p.S593Y . . . ZNF19 7567 broad.mit.edu 36 16 70066758 70066758 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006961 exon6 c.G1193T p.R398I . . . TAT 6898 broad.mit.edu 36 16 70159563 70159563 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000353 exon12 c.G1350A p.E450E . . . PHLPP2 23035 broad.mit.edu 36 16 70246653 70246653 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015020 exon16 c.T2576C p.V859A . . . AP1G1 164 broad.mit.edu 36 16 70326055 70326055 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030007 exon23 c.G2334A p.T778T . . . AP1G1 164 broad.mit.edu 36 16 70365902 70365902 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030007 exon3 c.T296C p.V99A . . . DHX38 9785 broad.mit.edu 36 16 70687592 70687592 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014003 exon2 c.G35A p.R12Q . . . PMFBP1 83449 broad.mit.edu 36 16 70714322 70714322 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001160213 exon20 c.C2325T p.G775G . . . ZFHX3 463 broad.mit.edu 36 16 71403345 71403345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006885 exon6 c.C3623T p.S1208L . . . GLG1 2734 broad.mit.edu 36 16 73044689 73044689 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145666 exon25 c.G3384T p.M1128I . . . RFWD3 55159 broad.mit.edu 36 16 73229332 73229332 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018124 exon7 c.G1117A p.E373K . . . CNTNAP4 85445 broad.mit.edu 36 16 75112688 75112688 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033401 exon16 c.T2515G p.L839V . . . MON1B 22879 broad.mit.edu 36 16 75789520 75789520 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014940 exon6 c.C1458T p.F486F . . . ADAMTS18 170692 broad.mit.edu 36 16 75953574 75953574 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199355 exon7 c.G1145T p.R382I ADAMTS18,large_intestine,colon,Substitution - Missense,0 . . WWOX 51741 broad.mit.edu 36 16 76755586 76755586 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130791 exon5 c.G415A p.E139K . . . RBFOX1 54715 broad.mit.edu 36 16 7699067 7699067 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145893 exon13 c.G1120A p.E374K . . . CENPN 55839 broad.mit.edu 36 16 79611304 79611304 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018455 exon6 c.C453T p.Y151Y . . . C16orf46 123775 broad.mit.edu 36 16 79652680 79652680 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152337 exon4 c.G775A p.D259N . . . PKD1L2 114780 broad.mit.edu 36 16 79770775 79770775 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052892 exon13 c.G2236T p.E746X . . . GAN 8139 broad.mit.edu 36 16 79954914 79954914 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022041 exon7 c.C1101T p.F367F . . . PLCG2 5336 broad.mit.edu 36 16 80499594 80499594 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002661 exon17 c.G1630A p.E544K . . . PLCG2 5336 broad.mit.edu 36 16 80525579 80525579 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002661 exon26 c.C2784T p.I928I . . . PLCG2 5336 broad.mit.edu 36 16 80527349 80527349 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002661 exon27 c.G2917A p.D973N . . . PLCG2 5336 broad.mit.edu 36 16 80527458 80527458 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002661 exon27 c.T3026C p.M1009T . . . CDH13 1012 broad.mit.edu 36 16 81808457 81808457 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001257 exon5 c.G490A p.D164N . . . MLYCD 23417 broad.mit.edu 36 16 82503459 82503460 + Missense_Mutation DNP GT TA TA novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 GT GT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012213 exon4 c.934_935TA . . . . USP10 9100 broad.mit.edu 36 16 83354147 83354147 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005153 exon9 c.C1606T p.H536Y . . . CRISPLD2 83716 broad.mit.edu 36 16 83445924 83445924 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031476 exon6 c.T697C p.L233L . . . IRF8 3394 broad.mit.edu 36 16 84500117 84500117 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002163 exon3 c.G195A p.G65G . . . ZCCHC14 23174 broad.mit.edu 36 16 86002658 86002658 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015144 exon12 c.A2759C p.D920A . . . CA5A 763 broad.mit.edu 36 16 86527546 86527546 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001739 exon1 c.G12A p.R4R . . . USP7 7874 broad.mit.edu 36 16 8912125 8912125 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003470 exon11 c.A1139G p.D380G . . . GRIN2A 2903 broad.mit.edu 36 16 9764521 9764521 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000833 exon14 c.G4381A p.E1461K . . . GRIN2A 2903 broad.mit.edu 36 16 9765599 9765599 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134408 exon13 c.C3303T p.V1101V . . . MYH13 8735 broad.mit.edu 36 17 10150603 10150603 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon37 c.G5364T p.K1788N . . . MYH13 8735 broad.mit.edu 36 17 10162852 10162852 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon27 c.G3718A p.E1240K . . . MYH13 8735 broad.mit.edu 36 17 10176198 10176198 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon20 c.G2241T p.E747D . . . MYH13 8735 broad.mit.edu 36 17 10198796 10198796 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon11 c.G931A p.D311N . . . MYH13 8735 broad.mit.edu 36 17 10199176 10199176 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon9 c.G752A p.R251Q . . . MYH4 4622 broad.mit.edu 36 17 10310398 10310398 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017533 exon4 c.G265A p.E89K . . . MYH2 4620 broad.mit.edu 36 17 10370982 10370982 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100112 exon29 c.A3988C p.K1330Q . . . MYH2 4620 broad.mit.edu 36 17 10373930 10373930 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100112 exon23 c.G2884T p.D962Y . . . MYH2 4620 broad.mit.edu 36 17 10391830 10391830 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100112 exon3 c.G133A p.E45K . . . MYH3 4621 broad.mit.edu 36 17 10474455 10474455 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002470 exon36 c.G5332A p.A1778T . . . MYH3 4621 broad.mit.edu 36 17 10476721 10476721 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002470 exon33 c.G4753A p.E1585K . . . MYH3 4621 broad.mit.edu 36 17 10488404 10488404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002470 exon13 c.G1399A p.E467K . . . DNAH9 1770 broad.mit.edu 36 17 11495129 11495129 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon13 c.G2116T p.E706X . . . DNAH9 1770 broad.mit.edu 36 17 11612513 11612513 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon37 c.G7189T p.E2397X . . . DNAH9 1770 broad.mit.edu 36 17 11641830 11641830 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon43 c.C8415T p.R2805R . . . DNAH9 1770 broad.mit.edu 36 17 11735867 11735867 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004662 exon4 c.G97A p.E33K . . . DNAH9 1770 broad.mit.edu 36 17 11738467 11738467 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004662 exon5 c.C271T p.R91X . . . ZNF18 7566 broad.mit.edu 36 17 11822366 11822366 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_144680 exon9 c.G1283T p.R428I . . . MAP2K4 6416 broad.mit.edu 36 17 11939644 11939644 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003010 exon4 c.G421A p.E141K . . . YWHAE 7531 broad.mit.edu 36 17 1215042 1215042 + Missense_Mutation SNP C A A rs11552917 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006761 exon2 c.G125T p.R42I . . . TEKT3 64518 broad.mit.edu 36 17 15148166 15148166 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031898 exon9 c.G1285A p.D429N . . . ZNF624 57547 broad.mit.edu 36 17 16467948 16467948 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020787 exon6 c.A977G p.H326R . . . CCDC144A 9720 broad.mit.edu 36 17 16606476 16606476 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014695 exon14 c.C3791T p.S1264L . . . C17orf39 79018 broad.mit.edu 36 17 17898192 17898192 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024052 exon3 c.C525T p.F175F . . . MYO15A 51168 broad.mit.edu 36 17 18007334 18007334 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016239 exon58 c.C9664T p.R3222C . . . TBC1D28 254272 broad.mit.edu 36 17 18481910 18481910 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039397 exon9 c.C489T p.F163F . . . ALDH3A2 224 broad.mit.edu 36 17 19500350 19500350 + Missense_Mutation SNP C T T rs72547562 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000382 exon4 c.C551T p.T184M . . . ULK2 9706 broad.mit.edu 36 17 19624504 19624504 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142610 exon25 c.T2789G p.F930C . . . SMG6 23293 broad.mit.edu 36 17 2147937 2147937 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170957 exon3 c.T1917C p.I639I . . . SPAG5 10615 broad.mit.edu 36 17 23929210 23929210 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006461 exon23 c.G3455A p.R1152Q . . . KIAA0100 9703 broad.mit.edu 36 17 23985873 23985873 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014680 exon16 c.C2859T p.L953L . . . SUPT6H 6830 broad.mit.edu 36 17 24035740 24035740 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003170 exon18 c.C2239T p.R747X . . . NUFIP2 57532 broad.mit.edu 36 17 24638324 24638324 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020772 exon2 c.C814T p.R272X . . . SSH2 85464 broad.mit.edu 36 17 25001871 25001871 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033389 exon12 c.C1072T p.R358W . . . SLC6A4 6532 broad.mit.edu 36 17 25569988 25569988 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001045 exon4 c.G431A p.R144Q . . . SLC6A4 6532 broad.mit.edu 36 17 25573091 25573091 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001045 exon3 c.G12A p.T4T . . . CPD 1362 broad.mit.edu 36 17 25813126 25813126 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199775 exon19 c.G2995T p.G999C . . . ATAD5 79915 broad.mit.edu 36 17 26195098 26195098 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024857 exon5 c.G2283A p.K761K . . . RNF135 84282 broad.mit.edu 36 17 26349893 26349893 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032322 exon5 c.G857A p.R286H . . . NF1 4763 broad.mit.edu 36 17 26604107 26604107 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042492 exon31 c.A4136C p.K1379T . . . NF1 4763 broad.mit.edu 36 17 26725293 26725293 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000267 exon57 c.C8451T p.I2817I . . . RHOT1 55288 broad.mit.edu 36 17 27558152 27558152 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033566 exon17 c.G1527A p.R509R . . . PSMD11 5717 broad.mit.edu 36 17 27815221 27815221 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002815 exon4 c.G360T p.E120D . . . MYO1D 4642 broad.mit.edu 36 17 28063196 28063196 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015194 exon16 c.C2044T p.R682X . . . OR1G1 8390 broad.mit.edu 36 17 2976930 2976930 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003555 exon1 c.C666T p.F222F . . . TMEM132E 124842 broad.mit.edu 36 17 29978156 29978156 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207313 exon3 c.C695T p.P232L . . . LIG3 3980 broad.mit.edu 36 17 30347767 30347767 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013975 exon11 c.A1805G p.D602G . . . RFFL 117584 broad.mit.edu 36 17 30363244 30363244 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017368 exon7 c.T948C p.C316C . . . SLFN5 162394 broad.mit.edu 36 17 30609955 30609955 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144975 exon2 c.C133T p.R45X . . . SLFN5 162394 broad.mit.edu 36 17 30610360 30610360 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144975 exon2 c.C538T p.R180W . . . SLFN11 91607 broad.mit.edu 36 17 30704189 30704189 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001104589 exon6 c.G2005A p.E669K . . . SLFN12 55106 broad.mit.edu 36 17 30773641 30773641 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018042 exon2 c.G520A p.E174K . . . CCL15 6359 broad.mit.edu 36 17 31337750 31337750 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032962 exon1 c.G49A p.A17T . . . GGNBP2 79893 broad.mit.edu 36 17 32009877 32009877 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024835 exon8 c.G935A p.R312Q . . . GGNBP2 79893 broad.mit.edu 36 17 32012000 32012000 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024835 exon9 c.G1134T p.K378N . . . AATF 26574 broad.mit.edu 36 17 32418029 32418029 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012138 exon5 c.G833A p.S278N . . . ACACA 31 broad.mit.edu 36 17 32560499 32560499 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198834 exon47 c.T5849A p.L1950Q . . . ACACA 31 broad.mit.edu 36 17 32592855 32592855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198834 exon42 c.C5302T p.R1768C . . . SPATA22 84690 broad.mit.edu 36 17 3299074 3299074 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170696 exon5 c.C320T p.S107L . . . GPR179 440435 broad.mit.edu 36 17 33736697 33736697 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004334 exon11 c.C6281T p.S2094F . . . CACNB1 782 broad.mit.edu 36 17 34594580 34594580 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000723 exon8 c.T712C p.S238P . . . RPL19 6143 broad.mit.edu 36 17 34614415 34614415 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000981 exon6 c.G579A p.E193E . . . MED1 5469 broad.mit.edu 36 17 34818032 34818032 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004774 exon17 c.A3968G p.D1323G . . . MED1 5469 broad.mit.edu 36 17 34818539 34818539 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004774 exon17 c.G3461A p.G1154D . . . CTNS 1497 broad.mit.edu 36 17 3498936 3498936 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004937 exon5 c.C187T p.R63C . . . ITGAE 3682 broad.mit.edu 36 17 3579538 3579538 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002208 exon24 c.C2895T p.F965F . . . KRT222 125113 broad.mit.edu 36 17 36067247 36067247 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152349 exon5 c.C542A p.S181Y . . . TMEM99 147184 broad.mit.edu 36 17 36244848 36244848 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001195386 exon3 c.A554C p.K185T . . . KRTAP9-2 83899 broad.mit.edu 36 17 36636869 36636869 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031961 exon1 c.G437A p.R146H . . . KRT34 3885 broad.mit.edu 36 17 36791494 36791494 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021013 exon2 c.G554A p.S185N . . . KRT37 8688 broad.mit.edu 36 17 36833918 36833918 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003770 exon1 c.G384T p.E128D . . . KRT36 8689 broad.mit.edu 36 17 36899272 36899272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003771 exon1 c.G371A p.R124H . . . HAP1 9001 broad.mit.edu 36 17 37142518 37142518 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079871 exon2 c.G528T p.V176V . . . FKBP10 60681 broad.mit.edu 36 17 37230190 37230190 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_021939 exon7 c.C1207T p.R403X . . . KLHL10 317719 broad.mit.edu 36 17 37255332 37255332 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152467 exon3 c.G1113A p.P371P . . . KLHL11 55175 broad.mit.edu 36 17 37265032 37265032 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018143 exon2 c.T613G p.C205G . . . ACLY 47 broad.mit.edu 36 17 37278533 37278533 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198830 exon27 c.G3136A p.A1046T . . . STAT5B 6777 broad.mit.edu 36 17 37622783 37622783 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012448 exon11 c.C1301T p.S434L . . . IFI35 3430 broad.mit.edu 36 17 38418629 38418629 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005533 exon3 c.G160T p.G54X . . . DHX8 1659 broad.mit.edu 36 17 38925627 38925627 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004941 exon6 c.C556T p.R186X . . . DHX8 1659 broad.mit.edu 36 17 38926379 38926379 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004941 exon7 c.C904T p.R302W . . . DHX8 1659 broad.mit.edu 36 17 38931847 38931847 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004941 exon10 c.T1392C p.I464I . . . ZZEF1 23140 broad.mit.edu 36 17 3904131 3904131 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015113 exon34 c.C5403T p.S1801S . . . MPP2 4355 broad.mit.edu 36 17 39310789 39310789 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005374 exon13 c.A1571G p.N524S . . . MPP2 4355 broad.mit.edu 36 17 39314042 39314042 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005374 exon9 c.C930T p.C310C . . . C17orf53 78995 broad.mit.edu 36 17 39581507 39581507 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001171251 exon3 c.G810A p.P270P . . . SLC4A1 6521 broad.mit.edu 36 17 39690893 39690893 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000342 exon11 c.C1269T p.F423F . . . C17orf104 284071 broad.mit.edu 36 17 40100684 40100684 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145080 exon5 c.G1879T p.D627Y . . . GJC1 10052 broad.mit.edu 36 17 40238327 40238327 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005497 exon3 c.G385T p.E129X . . . FMNL1 752 broad.mit.edu 36 17 40670468 40670468 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005892 exon8 c.T761C p.V254A . . . IMP5 162540 broad.mit.edu 36 17 41279225 41279225 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175882 exon1 c.C1173T p.F391F . . . MAPT 4137 broad.mit.edu 36 17 41429625 41429625 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016834 exon6 c.C406T p.R136C . . . STH 246744 broad.mit.edu 36 17 41432499 41432499 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007532 exon1 c.G17A p.G6D . . . C17orf57 124989 broad.mit.edu 36 17 42807058 42807058 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_152347 exon12 c.A1099C p.R367R . . . MRPL10 124995 broad.mit.edu 36 17 43259044 43259044 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148887 exon5 c.A520C p.M174L . . . TTLL6 284076 broad.mit.edu 36 17 44201525 44201525 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130918 exon15 c.G2501T p.S834I . . . ZNF652 22834 broad.mit.edu 36 17 44745126 44745126 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145365 exon3 c.G981T p.K327N . . . ZNF652 22834 broad.mit.edu 36 17 44750001 44750001 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145365 exon2 c.G86A p.R29H . . . PDK2 5164 broad.mit.edu 36 17 45540751 45540751 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002611 exon8 c.G832A p.A278T . . . COL1A1 1277 broad.mit.edu 36 17 45621838 45621838 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000088 exon39 c.C2728T p.R910C . . . COL1A1 1277 broad.mit.edu 36 17 45630321 45630321 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000088 exon8 c.G630A p.E210E . . . COL1A1 1277 broad.mit.edu 36 17 45632165 45632165 + Silent SNP G T T rs72667010 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000088 exon2 c.C246A p.P82P . . . NME1-NME2 654364 broad.mit.edu 36 17 46593548 46593548 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000269 exon4 c.C257T p.T86M . . . KIF1C 10749 broad.mit.edu 36 17 4851040 4851040 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006612 exon14 c.G1272A p.E424E . . . USP6 9098 broad.mit.edu 36 17 4989530 4989530 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004505 exon19 c.G2099A p.R700Q . . . RABEP1 9135 broad.mit.edu 36 17 5179211 5179211 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083585 exon4 c.C376T p.R126C . . . ANKFN1 162282 broad.mit.edu 36 17 51890323 51890323 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153228 exon13 c.C1550A p.A517E . . . ANKFN1 162282 broad.mit.edu 36 17 51898722 51898722 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153228 exon14 c.C1573T p.L525F . . . MIS12 79003 broad.mit.edu 36 17 5333300 5333300 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024039 exon3 c.T394G p.L132V . . . MIS12 79003 broad.mit.edu 36 17 5333508 5333508 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024039 exon3 c.G602A p.R201Q . . . OR4D1 26689 broad.mit.edu 36 17 53587615 53587615 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012374 exon1 c.C102A p.V34V . . . OR4D1 26689 broad.mit.edu 36 17 53588260 53588260 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012374 exon1 c.G747T p.M249I . . . OR4D2 124538 broad.mit.edu 36 17 53602576 53602576 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004707 exon1 c.T561C p.L187L . . . EPX 8288 broad.mit.edu 36 17 53625748 53625748 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000502 exon3 c.G188A p.R63H . . . EPX 8288 broad.mit.edu 36 17 53629481 53629481 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000502 exon7 c.G984A p.R328R . . . C17orf47 284083 broad.mit.edu 36 17 53975914 53975914 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001038704 exon1 c.G633A p.T211T . . . NLRP1 22861 broad.mit.edu 36 17 5402474 5402474 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033007 exon4 c.T2266G p.F756V . . . TRIM37 4591 broad.mit.edu 36 17 54507834 54507834 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005207 exon8 c.G640T p.E214X . . . C17orf71 55181 broad.mit.edu 36 17 54645449 54645449 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018149 exon3 c.G2483A p.R828K . . . CLTC 1213 broad.mit.edu 36 17 55113799 55113799 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004859 exon21 c.G3259T p.E1087X . . . TMEM49 81671 broad.mit.edu 36 17 55167554 55167554 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030938 exon3 c.G150A p.P50P . . . RNFT1 51136 broad.mit.edu 36 17 55394721 55394721 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016125 exon3 c.T553C p.Y185H . . . HEATR6 63897 broad.mit.edu 36 17 55480462 55480462 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022070 exon17 c.C2617T p.R873X . . . APPBP2 10513 broad.mit.edu 36 17 55879930 55879930 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006380 exon13 c.C1552T p.R518X . . . TBX4 9496 broad.mit.edu 36 17 56912237 56912237 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018488 exon7 c.G796T p.E266X . . . BRIP1 83990 broad.mit.edu 36 17 57212468 57212468 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032043 exon13 c.C1871T p.S624L . . . MED13 9969 broad.mit.edu 36 17 57427402 57427402 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005121 exon10 c.G2074T p.E692X . . . TANC2 26115 broad.mit.edu 36 17 58819840 58819840 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025185 exon14 c.C2582A p.P861Q . . . TANC2 26115 broad.mit.edu 36 17 58851308 58851308 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025185 exon25 c.C4233T p.F1411F . . . TANC2 26115 broad.mit.edu 36 17 58853030 58853030 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025185 exon25 c.C5955T p.F1985F . . . DDX42 11325 broad.mit.edu 36 17 59242240 59242240 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203499 exon13 c.G1373A p.R458Q . . . TEX2 55852 broad.mit.edu 36 17 59644150 59644150 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018469 exon2 c.G1160A p.G387E . . . DDX5 1655 broad.mit.edu 36 17 59926616 59926616 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004396 exon13 c.G1732A p.G578R . . . CCDC45 90799 broad.mit.edu 36 17 59963688 59963688 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138363 exon19 c.C2285T p.A762V . . . GNA13 10672 broad.mit.edu 36 17 60441343 60441343 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006572 exon4 c.G628A p.D210N . . . GNA13 10672 broad.mit.edu 36 17 60483048 60483048 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006572 exon1 c.G126T p.K42N . . . PSMD12 5718 broad.mit.edu 36 17 62773972 62773972 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174871 exon5 c.G542A p.R181Q . . . PITPNM3 83394 broad.mit.edu 36 17 6308307 6308307 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031220 exon16 c.C2063T p.T688I . . . BPTF 2186 broad.mit.edu 36 17 63346662 63346662 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182641 exon13 c.G5498A p.R1833Q . . . ARSG 22901 broad.mit.edu 36 17 63851512 63851512 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014960 exon3 c.G391A p.V131I . . . ABCA8 10351 broad.mit.edu 36 17 64393009 64393009 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007168 exon25 c.G3352A p.E1118K . . . ABCA8 10351 broad.mit.edu 36 17 64411109 64411109 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007168 exon18 c.G2405A p.R802Q . . . ABCA9 10350 broad.mit.edu 36 17 64492656 64492656 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080283 exon34 c.G4344A p.S1448S . . . ABCA6 23460 broad.mit.edu 36 17 64592788 64592788 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080284 exon32 c.C4160T p.A1387V . . . ABCA6 23460 broad.mit.edu 36 17 64642377 64642377 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080284 exon5 c.G562T p.E188X . . . KIAA0753 9851 broad.mit.edu 36 17 6467609 6467609 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014804 exon5 c.G832T p.E278X . . . ABCA10 10349 broad.mit.edu 36 17 64733076 64733076 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080282 exon4 c.G19A p.A7T . . . ABCA5 23461 broad.mit.edu 36 17 64759591 64759591 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon35 c.G4427A p.R1476Q . . . ABCA5 23461 broad.mit.edu 36 17 64767485 64767485 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon28 c.A3688C p.K1230Q . . . ABCA5 23461 broad.mit.edu 36 17 64820876 64820876 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon3 c.A259C p.I87L . . . KCNJ16 3773 broad.mit.edu 36 17 65640427 65640427 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018658 exon5 c.C604T p.R202C . . . TEKT1 83659 broad.mit.edu 36 17 6644954 6644954 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053285 exon7 c.T885A p.N295K . . . NXN 64359 broad.mit.edu 36 17 673634 673634 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022463 exon3 c.C600A p.F200L . . . COG1 9382 broad.mit.edu 36 17 68709283 68709283 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018714 exon7 c.C1722T p.S574S . . . C17orf80 55028 broad.mit.edu 36 17 68744092 68744092 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100622 exon3 c.C876A p.V292V . . . GPR142 350383 broad.mit.edu 36 17 69880070 69880070 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181790 exon4 c.C1125T p.F375F . . . CD300A 11314 broad.mit.edu 36 17 69985234 69985234 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007261 exon4 c.G598T p.A200S . . . SLC9A3R1 9368 broad.mit.edu 36 17 70276370 70276370 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004252 exon6 c.G1057A p.E353K . . . OTOP2 92736 broad.mit.edu 36 17 70438823 70438823 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178160 exon6 c.C1498A p.L500I . . . OTOP3 347741 broad.mit.edu 36 17 70454625 70454625 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178233 exon6 c.C1080T p.I360I . . . DLG4 1742 broad.mit.edu 36 17 7047355 7047355 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128827 exon7 c.G514A p.A172T . . . DLG4 1742 broad.mit.edu 36 17 7047805 7047805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128827 exon5 c.G256A p.G86S . . . GRB2 2885 broad.mit.edu 36 17 70829336 70829336 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002086 exon5 c.A467G p.Q156R . . . RNF157 114804 broad.mit.edu 36 17 71674785 71674785 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052916 exon5 c.A461G p.N154S . . . PRPSAP1 5635 broad.mit.edu 36 17 71837765 71837765 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002766 exon6 c.T589C p.Y197H . . . C17orf95 124512 broad.mit.edu 36 17 72241283 72241283 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080510 exon5 c.G493A p.E165K . . . C17orf74 201243 broad.mit.edu 36 17 7270627 7270627 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175734 exon3 c.A593G p.Y198C . . . SEC14L1 6397 broad.mit.edu 36 17 72708185 72708185 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039573 exon9 c.C844T p.R282W . . . CHRNB1 1140 broad.mit.edu 36 17 7299857 7299857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000747 exon10 c.C1238T p.A413V . . . TNRC6C 57690 broad.mit.edu 36 17 73606040 73606040 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018996 exon18 c.C4328T p.S1443L . . . FXR2 9513 broad.mit.edu 36 17 7448069 7448069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004860 exon4 c.C283T p.R95W . . . C1QTNF1 114897 broad.mit.edu 36 17 74555355 74555355 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198593 exon4 c.G436A p.A146T . . . SAT2 112483 broad.mit.edu 36 17 7470821 7470821 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_133491 exon5 c.C320T p.S107F . . . DNAH2 146754 broad.mit.edu 36 17 7578313 7578313 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon5 c.A716C p.K239T . . . DNAH2 146754 broad.mit.edu 36 17 7621644 7621644 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon32 c.C5214A p.D1738E . . . DNAH2 146754 broad.mit.edu 36 17 7630204 7630204 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon39 c.G6167A p.G2056D . . . DNAH2 146754 broad.mit.edu 36 17 7662029 7662029 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon67 c.G10277A p.R3426Q . . . DNAH2 146754 broad.mit.edu 36 17 7663352 7663352 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon71 c.T10916C p.I3639T . . . CHD3 1107 broad.mit.edu 36 17 7742125 7742125 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005852 exon12 c.G2031T p.K677N . . . CHD3 1107 broad.mit.edu 36 17 7744692 7744692 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005852 exon18 c.C2896T p.R966W . . . CNTROB 116840 broad.mit.edu 36 17 7791750 7791750 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053051 exon14 c.G2130T p.K710N . . . NARF 26502 broad.mit.edu 36 17 78015496 78015496 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031968 exon3 c.C153T p.S51S . . . ZNF750 79755 broad.mit.edu 36 17 78381612 78381612 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024702 exon3 c.G1867A p.A623T . . . ALOX15B 247 broad.mit.edu 36 17 7891043 7891043 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039130 exon9 c.C1294T p.R432W . . . ALOXE3 59344 broad.mit.edu 36 17 7959721 7959721 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165960 exon4 c.T759G p.I253M . . . TMEM107 84314 broad.mit.edu 36 17 8018590 8018590 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183065 exon4 c.C326T p.T109M . . . ARHGEF15 22899 broad.mit.edu 36 17 8157163 8157163 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173728 exon3 c.G800A p.R267H . . . PIK3R6 146850 broad.mit.edu 36 17 8663196 8663196 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010855 exon18 c.A1924G p.T642A . . . NTN1 9423 broad.mit.edu 36 17 9006915 9006915 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004822 exon3 c.C1079T p.S360L . . . STX8 9482 broad.mit.edu 36 17 9222645 9222645 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004853 exon7 c.C592T p.R198C . . . STX8 9482 broad.mit.edu 36 17 9412450 9412450 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004853 exon2 c.G80A p.R27Q . . . RCVRN 5957 broad.mit.edu 36 17 9749004 9749004 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002903 exon1 c.C219T p.F73F . . . FAM38B 63895 broad.mit.edu 36 18 10661583 10661583 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022068 exon52 c.A8200G p.I2734V . . . FAM38B 63895 broad.mit.edu 36 18 10686504 10686504 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022068 exon42 c.C6522A p.F2174L . . . GNAL 2774 broad.mit.edu 36 18 11743891 11743891 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142339 exon5 c.C340T p.R114X . . . GNAL 2774 broad.mit.edu 36 18 11814922 11814922 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142339 exon6 c.C399A p.F133L . . . TUBB6 84617 broad.mit.edu 36 18 12301000 12301000 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032525 exon3 c.C225T p.S75S . . . AFG3L2 10939 broad.mit.edu 36 18 12327383 12327383 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006796 exon16 c.G2132T p.R711I . . . MC5R 4161 broad.mit.edu 36 18 13815840 13815840 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005913 exon1 c.G76C p.V26L . . . MC5R 4161 broad.mit.edu 36 18 13816099 13816099 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005913 exon1 c.G335A p.R112H . . . LAMA3 3909 broad.mit.edu 36 18 19705574 19705574 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198129 exon38 c.C4949T p.A1650V . . . IMPACT 55364 broad.mit.edu 36 18 20262836 20262836 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018439 exon3 c.G171A p.M57I . . . IMPACT 55364 broad.mit.edu 36 18 20284787 20284787 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018439 exon11 c.A941G p.D314G . . . CHST9 83539 broad.mit.edu 36 18 22750651 22750651 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031422 exon6 c.A902G p.Y301C . . . CHST9 83539 broad.mit.edu 36 18 22750888 22750888 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031422 exon6 c.C665T p.A222V . . . CDH2 1000 broad.mit.edu 36 18 23836961 23836961 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001792 exon7 c.G1018A p.E340K . . . SMCHD1 23347 broad.mit.edu 36 18 2678662 2678662 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015295 exon7 c.G790A p.E264K . . . DSC2 1824 broad.mit.edu 36 18 26926064 26926064 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004949 exon3 c.A352C p.K118Q . . . DSC1 1823 broad.mit.edu 36 18 26974058 26974058 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004948 exon10 c.G1465T p.E489X . . . DSC1 1823 broad.mit.edu 36 18 26976126 26976126 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004948 exon9 c.A1094C p.E365A . . . DSG1 1828 broad.mit.edu 36 18 27180098 27180098 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001942 exon14 c.C2039A p.S680Y . . . DSG3 1830 broad.mit.edu 36 18 27298157 27298157 + Missense_Mutation SNP G A A rs73414212 by1000genomes TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001944 exon9 c.G1085A p.R362Q . . . DSG3 1830 broad.mit.edu 36 18 27309905 27309905 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001944 exon16 c.T2684G p.F895C . . . SMCHD1 23347 broad.mit.edu 36 18 2737526 2737526 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015295 exon30 c.C3808T p.P1270S . . . DSG2 1829 broad.mit.edu 36 18 27380060 27380060 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001943 exon15 c.G2713A p.E905K . . . SMCHD1 23347 broad.mit.edu 36 18 2740424 2740424 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015295 exon32 c.C4084A p.L1362I . . . C18orf34 374864 broad.mit.edu 36 18 28926794 28926794 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198995 exon20 c.G2203T p.E735X . . . MYOM1 8736 broad.mit.edu 36 18 3076121 3076121 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019856 exon29 c.T3878G p.I1293S . . . MAPRE2 10982 broad.mit.edu 36 18 30936067 30936067 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001143827 exon5 c.G520T p.E174X . . . ZNF24 7572 broad.mit.edu 36 18 31171460 31171460 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006965 exon4 c.T841C p.C281R . . . MYOM1 8736 broad.mit.edu 36 18 3154279 3154279 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019856 exon10 c.C1498T p.R500X . . . MYOM1 8736 broad.mit.edu 36 18 3158875 3158875 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019856 exon9 c.C1279T p.R427C . . . RPRD1A 55197 broad.mit.edu 36 18 31827225 31827225 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018170 exon7 c.C826T p.R276C . . . SLC39A6 25800 broad.mit.edu 36 18 31960245 31960245 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012319 exon2 c.G724T p.E242X . . . FHOD3 80206 broad.mit.edu 36 18 32543256 32543256 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025135 exon15 c.G1912A p.E638K . . . FHOD3 80206 broad.mit.edu 36 18 32574753 32574753 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025135 exon18 c.G3188A p.R1063Q . . . SETBP1 26040 broad.mit.edu 36 18 40535663 40535663 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015559 exon2 c.G354T p.K118N . . . SETBP1 26040 broad.mit.edu 36 18 40786119 40786119 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015559 exon4 c.A2816T p.K939M . . . SETBP1 26040 broad.mit.edu 36 18 40786742 40786742 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015559 exon4 c.C3439T p.L1147F . . . SLC14A2 8170 broad.mit.edu 36 18 41466385 41466385 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007163 exon5 c.G594A p.E198E . . . SLC14A2 8170 broad.mit.edu 36 18 41473766 41473766 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007163 exon7 c.A901G p.T301A . . . KIAA1632 57724 broad.mit.edu 36 18 41692732 41692732 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon41 c.G7023T p.Q2341H . . . KIAA1632 57724 broad.mit.edu 36 18 41786512 41786512 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon3 c.C1104T p.F368F . . . ATP5A1 498 broad.mit.edu 36 18 41929039 41929039 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004046 exon2 c.T117G p.S39S . . . SMAD2 4087 broad.mit.edu 36 18 43628922 43628922 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135937 exon7 c.A829C p.N277H . . . SMAD2 4087 broad.mit.edu 36 18 43649773 43649773 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135937 exon3 c.G269A p.R90Q . . . DYM 54808 broad.mit.edu 36 18 44899261 44899261 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017653 exon15 c.C1597T p.R533X . . . CCDC11 220136 broad.mit.edu 36 18 46031953 46031953 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145020 exon4 c.G673T p.E225X . . . MBD1 4152 broad.mit.edu 36 18 46057496 46057496 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015847 exon3 c.G187A p.D63N . . . MAPK4 5596 broad.mit.edu 36 18 46506487 46506487 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002747 exon5 c.C1011A p.I337I . . . POLI 11201 broad.mit.edu 36 18 50074117 50074117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007195 exon10 c.C1505T p.S502F . . . TXNL1 9352 broad.mit.edu 36 18 52432803 52432803 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004786 exon6 c.A585C p.K195N . . . NEDD4L 23327 broad.mit.edu 36 18 54184274 54184274 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015277 exon20 c.C1837T p.R613W . . . EPB41L3 23136 broad.mit.edu 36 18 5424098 5424098 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012307 exon7 c.C628T p.R210X . . . ALPK2 115701 broad.mit.edu 36 18 54355886 54355886 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052947 exon5 c.T2513C p.V838A . . . ALPK2 115701 broad.mit.edu 36 18 54429955 54429955 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052947 exon2 c.C55A p.L19I . . . ZNF532 55205 broad.mit.edu 36 18 54802271 54802271 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018181 exon11 c.A3499G p.K1167E . . . CPLX4 339302 broad.mit.edu 36 18 55136636 55136636 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181654 exon1 c.A39G p.V13V . . . CCBE1 147372 broad.mit.edu 36 18 55285040 55285040 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133459 exon5 c.G464A p.G155D . . . CDH20 28316 broad.mit.edu 36 18 57317553 57317553 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031891 exon2 c.C401T p.A134V . . . PHLPP1 23239 broad.mit.edu 36 18 58781670 58781670 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194449 exon14 c.C3545T p.S1182L . . . TMEM200C 645369 broad.mit.edu 36 18 5881952 5881952 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080209 exon1 c.C111T p.N37N . . . SERPINB12 89777 broad.mit.edu 36 18 59374401 59374401 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080474 exon1 c.A29C p.K10T . . . SERPINB4 6318 broad.mit.edu 36 18 59457414 59457414 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002974 exon7 c.C753T p.I251I . . . SERPINB4 6318 broad.mit.edu 36 18 59475060 59475060 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006919 exon7 c.C753T p.I251I . . . SERPINB4 6318 broad.mit.edu 36 18 59479398 59479398 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006919 exon2 c.C33A p.F11L . . . SERPINB10 5273 broad.mit.edu 36 18 59753163 59753163 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005024 exon7 c.G901T p.D301Y . . . SERPINB10 5273 broad.mit.edu 36 18 59753379 59753379 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005024 exon7 c.A1117C p.N373H . . . CDH19 28513 broad.mit.edu 36 18 62363000 62363000 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021153 exon6 c.A896G p.D299G . . . DSEL 92126 broad.mit.edu 36 18 63329572 63329572 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032160 exon2 c.G3284A p.R1095K . . . DSEL 92126 broad.mit.edu 36 18 63332769 63332769 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032160 exon2 c.C87A p.F29L . . . CCDC102B 79839 broad.mit.edu 36 18 64872308 64872308 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093729 exon10 c.G1496A p.R499K . . . CD226 10666 broad.mit.edu 36 18 65714206 65714206 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006566 exon4 c.G438T p.K146N . . . NETO1 81832 broad.mit.edu 36 18 68602011 68602011 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138966 exon7 c.C750A p.F250L . . . FBXO15 201456 broad.mit.edu 36 18 69941604 69941604 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_152676 exon8 c.C889T p.R297C . . . FAM69C 125704 broad.mit.edu 36 18 70260186 70260186 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001044369 exon3 c.G1022A p.R341H . . . CNDP2 55748 broad.mit.edu 36 18 70329058 70329058 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018235 exon6 c.G487A p.E163K . . . TSHZ1 10194 broad.mit.edu 36 18 71129394 71129394 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005786 exon2 c.C2909T p.S970L . . . LRRC30 339291 broad.mit.edu 36 18 7221884 7221884 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105581 exon1 c.G748A p.E250K . . . LRRC30 339291 broad.mit.edu 36 18 7222012 7222012 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105581 exon1 c.C876T p.F292F . . . ZNF236 7776 broad.mit.edu 36 18 72692726 72692726 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007345 exon3 c.G200A p.R67Q . . . ZNF236 7776 broad.mit.edu 36 18 72766415 72766415 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007345 exon22 c.A3938G p.N1313S . . . ZNF236 7776 broad.mit.edu 36 18 72768901 72768901 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007345 exon25 c.C4439T p.S1480L . . . GALR1 2587 broad.mit.edu 36 18 73109658 73109658 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001480 exon3 c.G862A p.A288T . . . YES1 7525 broad.mit.edu 36 18 733272 733272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005433 exon7 c.G868A p.E290K . . . PTPRM 5797 broad.mit.edu 36 18 8237878 8237878 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002845 exon16 c.A2488C p.N830H . . . PTPRM 5797 broad.mit.edu 36 18 8304784 8304784 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002845 exon19 c.C2809A p.H937N . . . ANKRD12 23253 broad.mit.edu 36 18 9185555 9185555 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015208 exon3 c.G94T p.D32Y . . . PPP4R1 9989 broad.mit.edu 36 18 9547367 9547367 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042388 exon15 c.G2042A p.R681Q . . . ZNF271 10778 broad.mit.edu 36 18 31140663 31140663 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNMT1 1786 broad.mit.edu 36 19 10126092 10126092 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001130823 exon22 c.G1896A p.T632T . . . DNMT1 1786 broad.mit.edu 36 19 10128124 10128124 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130823 exon18 c.G1342A p.E448K . . . KEAP1 9817 broad.mit.edu 36 19 10460902 10460902 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203500 exon5 c.G1674A p.G558G . . . KRI1 65095 broad.mit.edu 36 19 10529734 10529734 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023008 exon14 c.G1291A p.D431N . . . SLC44A2 57153 broad.mit.edu 36 19 10603729 10603729 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020428 exon10 c.C720A p.V240V . . . LDLR 3949 broad.mit.edu 36 19 11087825 11087825 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195802 exon10 c.A1279G p.N427D . . . ZNF627 199692 broad.mit.edu 36 19 11588838 11588838 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145295 exon4 c.G520T p.E174X . . . ZNF627 199692 broad.mit.edu 36 19 11589622 11589622 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145295 exon4 c.G1304A p.R435Q . . . ZNF441 126068 broad.mit.edu 36 19 11752955 11752955 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152355 exon4 c.G1316T p.R439I . . . ZNF441 126068 broad.mit.edu 36 19 11753194 11753194 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152355 exon4 c.C1555T p.R519X . . . ZNF491 126069 broad.mit.edu 36 19 11778796 11778796 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152356 exon3 c.G1028A p.R343Q . . . ZNF440 126070 broad.mit.edu 36 19 11803553 11803553 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152357 exon4 c.C562T p.R188X . . . ZNF440 126070 broad.mit.edu 36 19 11804057 11804057 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152357 exon4 c.C1066T p.Q356X . . . ZNF700 90592 broad.mit.edu 36 19 11920564 11920564 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144566 exon4 c.G725T p.R242I . . . ZNF763 284390 broad.mit.edu 36 19 11950650 11950650 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001012753 exon4 c.G920T p.R307I . . . ZNF433 163059 broad.mit.edu 36 19 11987117 11987117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080411 exon4 c.G1565A p.R522Q . . . ZNF878 729747 broad.mit.edu 36 19 12015704 12015704 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080404 exon5 c.G1653T p.E551D . . . ZNF44 51710 broad.mit.edu 36 19 12245807 12245807 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016264 exon4 c.G263A p.R88Q . . . ZNF563 147837 broad.mit.edu 36 19 12290529 12290529 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145276 exon4 c.G1310A p.R437Q . . . ZNF442 79973 broad.mit.edu 36 19 12321717 12321717 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030824 exon6 c.G1682A p.R561Q . . . ZNF443 10224 broad.mit.edu 36 19 12403084 12403084 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005815 exon4 c.G902T p.R301I . . . ZNF709 163051 broad.mit.edu 36 19 12435841 12435841 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152601 exon4 c.G1895A p.R632Q . . . ZNF709 163051 broad.mit.edu 36 19 12436430 12436430 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152601 exon4 c.C1306T p.R436X . . . ZNF564 163050 broad.mit.edu 36 19 12498295 12498295 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144976 exon4 c.A1627G p.I543V . . . ZNF490 57474 broad.mit.edu 36 19 12553248 12553248 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020714 exon5 c.G641A p.R214K . . . BEST2 54831 broad.mit.edu 36 19 12726712 12726712 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017682 exon4 c.G503A p.R168H . . . MAST1 22983 broad.mit.edu 36 19 12830202 12830202 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014975 exon11 c.G1104A p.P368P . . . TRMT1 55621 broad.mit.edu 36 19 13087990 13087990 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017722 exon1 c.A224C p.N75T . . . CACNA1A 773 broad.mit.edu 36 19 13226981 13226981 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174080 exon29 c.C4686T p.F1562F . . . CACNA1A 773 broad.mit.edu 36 19 13424744 13424744 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174080 exon3 c.G485A p.G162D . . . LPHN1 22859 broad.mit.edu 36 19 14124675 14124675 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014921 exon19 c.G3344A p.R1115H . . . EMR3 84658 broad.mit.edu 36 19 14622920 14622921 + Missense_Mutation DNP TC AT AT novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 TC TC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032571 exon7 c.673_674AT . . . . EMR3 84658 broad.mit.edu 36 19 14633866 14633866 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032571 exon4 c.C264T p.V88V . . . OR7A17 26333 broad.mit.edu 36 19 14852525 14852525 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030901 exon1 c.C643A p.L215I . . . CCDC105 126402 broad.mit.edu 36 19 14985536 14985536 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173482 exon2 c.G623A p.S208N . . . CYP4F8 11283 broad.mit.edu 36 19 15594149 15594149 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007253 exon6 c.G645A p.R215R . . . OR10H1 26539 broad.mit.edu 36 19 15779499 15779499 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_013940 exon1 c.G349A p.V117I . . . CYP4F2 8529 broad.mit.edu 36 19 15851700 15851700 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082 exon10 c.C1123A p.L375M . . . CYP4F11 57834 broad.mit.edu 36 19 15893917 15893917 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128932 exon9 c.G1045A p.E349K . . . C19orf44 84167 broad.mit.edu 36 19 16475191 16475191 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032207 exon3 c.G1075A p.E359K . . . NWD1 284434 broad.mit.edu 36 19 16721349 16721349 + Missense_Mutation SNP G A A rs61737596 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007525 exon6 c.G896A p.R299H . . . NWD1 284434 broad.mit.edu 36 19 16744957 16744957 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007525 exon11 c.G2431T p.E811X . . . MPV17L2 84769 broad.mit.edu 36 19 18167814 18167815 + Missense_Mutation DNP AG CC CC novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032683 exon5 c.570_571CC . . . . ZNF14 7561 broad.mit.edu 36 19 19683367 19683367 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021030 exon4 c.C1723T p.R575X . . . ZNF14 7561 broad.mit.edu 36 19 19683451 19683451 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021030 exon4 c.C1639T p.R547X . . . ZNF14 7561 broad.mit.edu 36 19 19685904 19685904 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021030 exon3 c.C187T p.R63X . . . ZNF253 56242 broad.mit.edu 36 19 19863715 19863715 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021047 exon4 c.G659T p.R220I . . . ZNF253 56242 broad.mit.edu 36 19 19864002 19864002 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021047 exon4 c.G946T p.E316X . . . ZNF93 81931 broad.mit.edu 36 19 19905140 19905140 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031218 exon4 c.C376T p.H126Y . . . ZNF626 199777 broad.mit.edu 36 19 20599255 20599255 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001076675 exon4 c.G1268T p.R423I . . . ZNF85 7639 broad.mit.edu 36 19 20924670 20924670 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003429 exon4 c.C1510A p.H504N . . . ZNF714 148206 broad.mit.edu 36 19 21092556 21092556 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182515 exon5 c.A1246C p.I416L . . . ZNF431 170959 broad.mit.edu 36 19 21158009 21158009 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133473 exon5 c.C1063T p.R355X . . . ZNF708 7562 broad.mit.edu 36 19 21268872 21268872 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021269 exon4 c.C736A p.H246N . . . ZNF429 353088 broad.mit.edu 36 19 21511525 21511525 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001415 exon4 c.G830T p.R277I . . . ZNF43 7594 broad.mit.edu 36 19 21782777 21782777 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003423 exon4 c.C1902T p.F634F . . . ZNF43 7594 broad.mit.edu 36 19 21783591 21783591 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003423 exon4 c.T1088C p.I363T . . . ZNF208 7757 broad.mit.edu 36 19 21947449 21947449 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007153 exon4 c.C2227A p.H743N . . . ZNF208 7757 broad.mit.edu 36 19 21949423 21949423 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007153 exon4 c.C253A p.L85I . . . ZNF257 113835 broad.mit.edu 36 19 22063042 22063042 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033468 exon4 c.C650A p.T217N . . . ZNF257 113835 broad.mit.edu 36 19 22063567 22063567 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033468 exon4 c.G1175A p.R392K . . . ZNF99 7652 broad.mit.edu 36 19 22731685 22731685 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080409 exon6 c.C2486T p.S829L . . . ZNF675 171392 broad.mit.edu 36 19 23628916 23628916 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138330 exon4 c.G659T p.R220I . . . ZNF675 171392 broad.mit.edu 36 19 23629294 23629294 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138330 exon4 c.C281A p.S94Y . . . ZNF681 148213 broad.mit.edu 36 19 23718643 23718643 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138286 exon4 c.C1549T p.R517X . . . ZNF254 9534 broad.mit.edu 36 19 24101179 24101179 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203282 exon4 c.G537T p.K179N . . . MIER2 54531 broad.mit.edu 36 19 276648 276648 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017550 exon7 c.G642A p.R214R . . . UQCRFS1 7386 broad.mit.edu 36 19 34390663 34390663 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006003 exon2 c.G457A p.E153K . . . ZNF536 9745 broad.mit.edu 36 19 35731117 35731117 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014717 exon4 c.C2751A p.S917S . . . TSHZ3 57616 broad.mit.edu 36 19 36462488 36462488 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020856 exon2 c.C51T p.S17S . . . DPY19L3 147991 broad.mit.edu 36 19 37619219 37619219 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172774 exon5 c.A356C p.K119T . . . DPY19L3 147991 broad.mit.edu 36 19 37660399 37660399 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001172774 exon17 c.C1829T p.A610V . . . ANKRD27 84079 broad.mit.edu 36 19 37825894 37825894 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032139 exon9 c.G757T p.D253Y . . . NUDT19 390916 broad.mit.edu 36 19 37894615 37894615 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105570 exon3 c.G1040A p.R347H . . . C19orf40 91442 broad.mit.edu 36 19 38156240 38156240 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152266 exon3 c.C175A p.L59I . . . ATCAY 85300 broad.mit.edu 36 19 3864756 3864756 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_033064 exon9 c.C867T p.S289S . . . SCGBL 284402 broad.mit.edu 36 19 39777071 39777071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025591 exon2 c.C95T p.A32V . . . ZNF302 55900 broad.mit.edu 36 19 39867476 39867476 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012320 exon5 c.C694T p.R232C . . . CD22 933 broad.mit.edu 36 19 40515491 40515491 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001185100 exon3 c.G236A p.S79N . . . CD22 933 broad.mit.edu 36 19 40524528 40524528 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001185100 exon9 c.G1855A p.D619N . . . FFAR2 2867 broad.mit.edu 36 19 40632669 40632669 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005306 exon1 c.G213A p.S71S . . . NPHS1 4868 broad.mit.edu 36 19 41025158 41025158 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004646 exon18 c.G2469A p.A823A . . . APLP1 333 broad.mit.edu 36 19 41056387 41056387 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024807 exon8 c.C988T p.R330C . . . ZNF146 7705 broad.mit.edu 36 19 41419399 41419399 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099639 exon3 c.G217A p.E73K . . . ZFP14 57677 broad.mit.edu 36 19 41523415 41523415 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020917 exon5 c.C1153T p.R385C . . . ZFP14 57677 broad.mit.edu 36 19 41523605 41523605 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020917 exon5 c.C963T p.F321F . . . ZFP14 57677 broad.mit.edu 36 19 41523918 41523918 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_020917 exon5 c.G650A p.R217Q . . . ZFP82 284406 broad.mit.edu 36 19 41576232 41576232 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133466 exon5 c.T850G p.C284G . . . ANKRD24 170961 broad.mit.edu 36 19 4170646 4170646 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_133475 exon19 c.C3062T p.A1021V . . . ZNF529 57711 broad.mit.edu 36 19 41729641 41729641 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145649 exon6 c.G1659A p.P553P . . . ZNF382 84911 broad.mit.edu 36 19 41809922 41809922 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032825 exon5 c.G1283T p.R428I . . . ZNF461 92283 broad.mit.edu 36 19 41821957 41821957 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153257 exon6 c.G1130T p.R377I . . . ZNF567 163081 broad.mit.edu 36 19 41903376 41903376 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152603 exon4 c.G1817T p.R606I . . . ZNF790 388536 broad.mit.edu 36 19 42001988 42001988 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206894 exon5 c.T1098C p.H366H . . . ZNF345 25850 broad.mit.edu 36 19 42059817 42059817 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003419 exon3 c.G245A p.R82Q . . . ZNF345 25850 broad.mit.edu 36 19 42060233 42060233 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003419 exon3 c.C661T p.R221W . . . ZNF345 25850 broad.mit.edu 36 19 42061019 42061019 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003419 exon3 c.G1447A p.E483K . . . ZNF829 374899 broad.mit.edu 36 19 42074334 42074334 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037232 exon6 c.G1199T p.R400I . . . ZNF568 374900 broad.mit.edu 36 19 42133207 42133207 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198539 exon7 c.C1312T p.R438X . . . ZNF585A 199704 broad.mit.edu 36 19 42335168 42335168 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199126 exon6 c.G1308T p.E436D . . . ZNF585A 199704 broad.mit.edu 36 19 42335237 42335237 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199126 exon6 c.C1239T p.C413C . . . ZNF585A 199704 broad.mit.edu 36 19 42335815 42335815 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199126 exon6 c.G661A p.G221R . . . ZNF527 84503 broad.mit.edu 36 19 42571756 42571756 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032453 exon5 c.G965T p.R322I . . . ZNF569 148266 broad.mit.edu 36 19 42595435 42595435 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152484 exon6 c.A1965C p.K655N . . . ZNF569 148266 broad.mit.edu 36 19 42596578 42596578 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152484 exon6 c.A822G p.E274E . . . ZNF540 163255 broad.mit.edu 36 19 42794441 42794441 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152606 exon5 c.T420C p.S140S . . . ZNF781 163115 broad.mit.edu 36 19 42852573 42852573 + Missense_Mutation SNP C T T rs12460961 byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152605 exon4 c.G317A p.R106Q . . . ZNF573 126231 broad.mit.edu 36 19 42922182 42922182 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172691 exon5 c.G1043T p.R348I . . . RYR1 6261 broad.mit.edu 36 19 43675027 43675027 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042723 exon38 c.G6185A p.R2062H . . . MAP4K1 11184 broad.mit.edu 36 19 43795137 43795137 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042600 exon9 c.G619A p.E207K . . . CAPN12 147968 broad.mit.edu 36 19 43925539 43925539 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144691 exon2 c.G281A p.R94H . . . HNRNPL 3191 broad.mit.edu 36 19 44028523 44028523 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005335 exon3 c.A35G p.E12G . . . CLC 1178 broad.mit.edu 36 19 44916809 44916809 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001828 exon3 c.G257A p.G86D . . . ZNF546 339327 broad.mit.edu 36 19 45212735 45212735 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178544 exon7 c.G1718A p.R573Q . . . ZNF780B 163131 broad.mit.edu 36 19 45234215 45234215 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005851 exon5 c.C391T p.R131X . . . SPTBN4 57731 broad.mit.edu 36 19 45763231 45763231 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_020971 exon28 c.C5978T p.A1993V . . . CEACAM21 90273 broad.mit.edu 36 19 46783654 46783654 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033543 exon5 c.C813A p.D271E . . . PSG3 5671 broad.mit.edu 36 19 47925169 47925169 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021016 exon5 c.C1189T p.R397C . . . PSG8 440533 broad.mit.edu 36 19 47959908 47959908 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182707 exon2 c.C430T p.L144L . . . PSG1 5669 broad.mit.edu 36 19 48075540 48075540 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006905 exon1 c.C34T p.R12C . . . PSG6 5675 broad.mit.edu 36 19 48220683 48220683 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002785 exon2 c.C430T p.L144L . . . PSG5 5673 broad.mit.edu 36 19 48371216 48371216 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130014 exon4 c.G955A p.E319K . . . PSG9 5678 broad.mit.edu 36 19 48464103 48464103 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002784 exon2 c.G103A p.E35K . . . PLAUR 5329 broad.mit.edu 36 19 48852597 48852597 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005377 exon4 c.G346A p.E116K . . . ZNF283 284349 broad.mit.edu 36 19 49043768 49043768 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181845 exon7 c.G1175A p.R392Q . . . ZNF225 7768 broad.mit.edu 36 19 49328556 49328556 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013362 exon5 c.A1949C p.K650T . . . ZFP112 7771 broad.mit.edu 36 19 49524989 49524989 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013380 exon4 c.G1161T p.E387D . . . ZNF229 7772 broad.mit.edu 36 19 49625089 49625089 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014518 exon6 c.G1707T p.E569D . . . ZNF180 7733 broad.mit.edu 36 19 49672664 49672664 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013256 exon5 c.G1874T p.R625I . . . PVR 5817 broad.mit.edu 36 19 49842630 49842630 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135768 exon2 c.C375T p.F125F . . . CLPTM1 1209 broad.mit.edu 36 19 50169580 50169580 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001294 exon4 c.C354A p.F118L . . . NANOS2 339345 broad.mit.edu 36 19 51109488 51109488 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029861 exon1 c.G304A p.G102R . . . HIF3A 64344 broad.mit.edu 36 19 51526359 51526359 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152795 exon13 c.C1819T p.P607S . . . PPP5C 5536 broad.mit.edu 36 19 51580003 51580003 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006247 exon7 c.C901T p.R301X . . . PTPRS 5802 broad.mit.edu 36 19 5159051 5159051 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002850 exon37 c.C5660T p.T1887M . . . PNMAL1 55228 broad.mit.edu 36 19 51666010 51666010 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018215 exon2 c.G123A p.E41E . . . PNMAL2 57469 broad.mit.edu 36 19 51689473 51689473 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020709 exon1 c.G1090A p.D364N . . . GRLF1 2909 broad.mit.edu 36 19 52114350 52114350 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004491 exon1 c.A578C p.K193T . . . PLA2G4C 8605 broad.mit.edu 36 19 53269936 53269936 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159323 exon12 c.C906T p.G302G . . . LIG1 3978 broad.mit.edu 36 19 53310989 53310989 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000234 exon27 c.C2629T p.R877X . . . SYNGR4 23546 broad.mit.edu 36 19 53571188 53571188 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012451 exon5 c.G506A p.R169Q . . . GRWD1 83743 broad.mit.edu 36 19 53641758 53641758 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_031485 exon3 c.T314G p.M105R . . . PPP1R15A 23645 broad.mit.edu 36 19 54068999 54068999 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014330 exon2 c.G697A p.E233K . . . SLC17A7 57030 broad.mit.edu 36 19 54626474 54626474 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020309 exon10 c.G1194A p.S398S . . . ZNF473 25888 broad.mit.edu 36 19 55242018 55242018 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006656 exon5 c.C2506A p.H836N . . . KLK15 55554 broad.mit.edu 36 19 56021779 56021779 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017509 exon4 c.G528A p.S176S . . . KLK15 55554 broad.mit.edu 36 19 56022111 56022111 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017509 exon3 c.G316A p.D106N . . . KLK5 25818 broad.mit.edu 36 19 56144029 56144029 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077492 exon4 c.C490T p.R164C . . . KLK6 5653 broad.mit.edu 36 19 56158484 56158484 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012964 exon4 c.C331T p.R111C . . . KLK13 26085 broad.mit.edu 36 19 56255570 56255570 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015596 exon2 c.G171A p.G57G . . . SIGLEC10 89790 broad.mit.edu 36 19 56611908 56611908 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171157 exon3 c.C530A p.S177Y . . . ZNF577 84765 broad.mit.edu 36 19 57067635 57067635 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032679 exon7 c.A1420C p.N474H . . . ZNF649 65251 broad.mit.edu 36 19 57086246 57086246 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_023074 exon5 c.A955G p.T319A . . . ZNF615 284370 broad.mit.edu 36 19 57188126 57188126 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198480 exon6 c.G2015A p.R672K . . . ZNF615 284370 broad.mit.edu 36 19 57189218 57189218 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198480 exon6 c.G923A p.R308Q . . . ZNF432 9668 broad.mit.edu 36 19 57229167 57229167 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014650 exon5 c.G1577A p.S526N . . . ZNF432 9668 broad.mit.edu 36 19 57229986 57229986 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014650 exon5 c.G758T p.R253I . . . ZNF432 9668 broad.mit.edu 36 19 57230154 57230154 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014650 exon5 c.G590T p.R197I . . . ZNF616 90317 broad.mit.edu 36 19 57310171 57310171 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178523 exon4 c.G2058T p.K686N . . . ZNF616 90317 broad.mit.edu 36 19 57310523 57310523 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178523 exon4 c.G1706A p.R569K . . . ZNF836 162962 broad.mit.edu 36 19 57349950 57349950 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102657 exon5 c.C2798A p.S933Y . . . ZNF836 162962 broad.mit.edu 36 19 57350523 57350523 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102657 exon5 c.G2225T p.R742I . . . ZNF836 162962 broad.mit.edu 36 19 57352219 57352219 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102657 exon5 c.G529A p.V177I . . . ZNF528 84436 broad.mit.edu 36 19 57601669 57601669 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032423 exon6 c.G232A p.D78N . . . ZNF534 147658 broad.mit.edu 36 19 57633359 57633359 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143939 exon4 c.C873A p.V291V . . . ZNF808 388558 broad.mit.edu 36 19 57749825 57749825 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039886 exon5 c.G1844T p.R615I . . . ZNF701 55762 broad.mit.edu 36 19 57778129 57778129 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018260 exon4 c.C1005A p.F335L . . . ZNF83 55769 broad.mit.edu 36 19 57808982 57808982 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105552 exon4 c.A648C p.Q216H . . . ZNF28 7576 broad.mit.edu 36 19 57994848 57994848 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006969 exon4 c.G2062A p.E688K . . . ZNF816 125893 broad.mit.edu 36 19 58146259 58146259 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031665 exon5 c.G581T p.R194I . . . VN1R2 317701 broad.mit.edu 36 19 58454215 58454215 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173856 exon1 c.A775G p.K259E . . . VN1R4 317703 broad.mit.edu 36 19 58462122 58462122 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173857 exon1 c.T609G p.V203V . . . NLRP12 91662 broad.mit.edu 36 19 59005696 59005696 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144687 exon3 c.G1029A p.R343R . . . NLRP12 91662 broad.mit.edu 36 19 59010035 59010035 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144687 exon2 c.G309A p.P103P . . . PRKCG 5582 broad.mit.edu 36 19 59098204 59098204 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002739 exon15 c.G1641A p.E547E . . . TMC4 147798 broad.mit.edu 36 19 59365205 59365205 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001145303 exon3 c.G317T p.R106I . . . LILRB3 11025 broad.mit.edu 36 19 59413027 59413027 + Silent SNP C T T rs1053011 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006864 exon12 c.G1722A p.V574V . . . LILRB1 10859 broad.mit.edu 36 19 59836421 59836421 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081639 exon7 c.G1101A p.W367X . . . KIR3DL1 3811 broad.mit.edu 36 19 60032711 60032711 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013289 exon7 c.C1084A p.L362I . . . NLRP7 199713 broad.mit.edu 36 19 60136826 60136826 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139176 exon8 c.G2481T p.K827N . . . NLRP7 199713 broad.mit.edu 36 19 60143132 60143132 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_139176 exon4 c.G867A p.R289R . . . BRSK1 84446 broad.mit.edu 36 19 60497218 60497218 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032430 exon5 c.G480A p.E160E . . . ZNF524 147807 broad.mit.edu 36 19 60805323 60805323 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153219 exon2 c.G33A p.S11S . . . NLRP9 338321 broad.mit.edu 36 19 60936147 60936147 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176820 exon2 c.C862T p.R288W . . . NLRP11 204801 broad.mit.edu 36 19 61013424 61013424 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145007 exon5 c.C364T p.R122C . . . NLRP4 147945 broad.mit.edu 36 19 61080211 61080211 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134444 exon8 c.G2563T p.D855Y . . . NLRP8 126205 broad.mit.edu 36 19 61158046 61158046 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176811 exon3 c.C810T p.L270L . . . ACSBG2 81616 broad.mit.edu 36 19 6117026 6117026 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030924 exon7 c.C738T p.N246N . . . NLRP5 126206 broad.mit.edu 36 19 61207237 61207237 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153447 exon2 c.C406T p.R136X . . . ACSBG2 81616 broad.mit.edu 36 19 6136582 6136582 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030924 exon11 c.C1458T p.I486I . . . ZNF582 147948 broad.mit.edu 36 19 61587723 61587723 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144690 exon5 c.T875G p.F292C . . . ZNF471 57573 broad.mit.edu 36 19 61728684 61728684 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020813 exon5 c.G1436T p.R479I . . . ZFP28 140612 broad.mit.edu 36 19 61757491 61757491 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020828 exon8 c.G1525A p.D509N . . . ZFP28 140612 broad.mit.edu 36 19 61757715 61757715 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020828 exon8 c.T1749C p.H583H . . . ZFP28 140612 broad.mit.edu 36 19 61757971 61757971 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020828 exon8 c.G2005T p.G669X . . . ZNF835 90485 broad.mit.edu 36 19 61867906 61867906 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005850 exon2 c.G539A p.R180H . . . USP29 57663 broad.mit.edu 36 19 62332737 62332737 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020903 exon4 c.T882G p.C294W . . . ZNF460 10794 broad.mit.edu 36 19 62494947 62494947 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006635 exon3 c.G1226A p.R409Q . . . ZNF304 57343 broad.mit.edu 36 19 62560496 62560496 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020657 exon3 c.G1447A p.A483T . . . ACER1 125981 broad.mit.edu 36 19 6260763 6260763 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133492 exon4 c.G433A p.A145T . . . VN1R1 57191 broad.mit.edu 36 19 62659543 62659543 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020633 exon1 c.G124A p.A42T . . . ZNF419 79744 broad.mit.edu 36 19 62697073 62697073 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098494 exon4 c.C1240T p.R414X . . . ZNF530 348327 broad.mit.edu 36 19 62809381 62809381 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020880 exon3 c.T676G p.F226V . . . ZNF134 7693 broad.mit.edu 36 19 62824123 62824123 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003435 exon3 c.T824G p.L275R . . . ZNF211 10520 broad.mit.edu 36 19 62837818 62837818 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198855 exon2 c.A100G p.T34A . . . ZNF154 7710 broad.mit.edu 36 19 62905506 62905506 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085384 exon3 c.G623A p.R208Q . . . ZNF586 54807 broad.mit.edu 36 19 62982914 62982914 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017652 exon3 c.C1147T p.R383C . . . ZNF135 7694 broad.mit.edu 36 19 63270568 63270568 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003436 exon5 c.G940A p.E314K . . . ZNF274 10782 broad.mit.edu 36 19 63416028 63416028 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016325 exon7 c.C1572A p.F524L . . . A1BG 1 broad.mit.edu 36 19 63556341 63556341 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130786 exon3 c.C105T p.S35S . . . ZNF584 201514 broad.mit.edu 36 19 63620375 63620375 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173548 exon4 c.G678A p.P226P . . . CHMP2A 27243 broad.mit.edu 36 19 63755566 63755566 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198426 exon3 c.C220T p.R74C . . . CD70 970 broad.mit.edu 36 19 6537039 6537039 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001252 exon3 c.C574T p.R192C . . . TNFSF14 8740 broad.mit.edu 36 19 6616058 6616058 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003807 exon5 c.G602A p.S201N . . . C3 718 broad.mit.edu 36 19 6648759 6648759 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000064 exon20 c.C2487A p.F829L . . . HNRNPM 4670 broad.mit.edu 36 19 8454043 8454043 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005968 exon13 c.A1122C p.E374D . . . MBD3L1 85509 broad.mit.edu 36 19 8814931 8814931 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145208 exon1 c.A577C p.K193Q . . . MUC16 94025 broad.mit.edu 36 19 8854521 8854521 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon66 c.C41568T p.T13856T . . . MUC16 94025 broad.mit.edu 36 19 8861518 8861518 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon54 c.A40466G p.N13489S . . . MUC16 94025 broad.mit.edu 36 19 8910298 8910298 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon5 c.C32333T p.S10778L . . . MUC16 94025 broad.mit.edu 36 19 8922629 8922629 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G25817A p.R8606H . . . MUC16 94025 broad.mit.edu 36 19 8927570 8927570 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.C20876T p.S6959F . . . MUC16 94025 broad.mit.edu 36 19 8928148 8928148 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G20298A p.S6766S . . . MUC16 94025 broad.mit.edu 36 19 8928385 8928385 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G20061T p.E6687D . . . MUC16 94025 broad.mit.edu 36 19 8931618 8931618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.C16828T p.R5610W . . . MUC16 94025 broad.mit.edu 36 19 8935162 8935162 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G13284T p.K4428N . . . MUC16 94025 broad.mit.edu 36 19 8945542 8945542 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon1 c.G7273A p.A2425T . . . MUC16 94025 broad.mit.edu 36 19 8947115 8947115 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon1 c.G5700A p.E1900E . . . MUC16 94025 broad.mit.edu 36 19 8951741 8951741 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon1 c.G1074T p.K358N . . . OR7E24 26648 broad.mit.edu 36 19 9223191 9223191 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079935 exon1 c.C472A p.L158I . . . ZNF560 147741 broad.mit.edu 36 19 9441346 9441346 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152476 exon8 c.G489T p.E163D . . . ZNF826P 664701 broad.mit.edu 36 19 20369655 20369655 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PRR19 284338 broad.mit.edu 36 19 47506262 47506262 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AGL 178 broad.mit.edu 36 1 100108619 100108619 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000645 exon4 c.C689T p.A230V . . . VCAM1 7412 broad.mit.edu 36 1 100976407 100976407 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199834 exon9 c.G2014A p.A672T . . . SLC30A7 148867 broad.mit.edu 36 1 101199975 101199975 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133496 exon9 c.T846G p.V282V . . . KIF1B 23095 broad.mit.edu 36 1 10286810 10286810 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183416 exon21 c.G2980A p.D994N . . . COL11A1 1301 broad.mit.edu 36 1 103264002 103264002 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080629 exon6 c.T875G p.F292C . . . KIF1B 23095 broad.mit.edu 36 1 10345950 10345950 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015074 exon39 c.G4189A p.E1397K . . . NTNG1 22854 broad.mit.edu 36 1 107668678 107668678 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113228 exon3 c.C498T p.L166L . . . VAV3 10451 broad.mit.edu 36 1 107986884 107986884 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006113 exon20 c.G1794A p.Q598Q . . . C1orf59 113802 broad.mit.edu 36 1 108993019 108993019 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144584 exon8 c.G874T p.E292X . . . WDR47 22911 broad.mit.edu 36 1 109330809 109330809 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014969 exon10 c.A1787C p.K596T . . . SORT1 6272 broad.mit.edu 36 1 109661054 109661054 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002959 exon17 c.C2191T p.R731X . . . GNAT2 2780 broad.mit.edu 36 1 109947566 109947566 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005272 exon8 c.A998C p.K333T . . . AHCYL1 10768 broad.mit.edu 36 1 110359640 110359640 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006621 exon7 c.G746A p.R249Q . . . KCNA3 3738 broad.mit.edu 36 1 111017245 111017245 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002232 exon1 c.G1710T p.K570N . . . KCNA3 3738 broad.mit.edu 36 1 111017544 111017544 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002232 exon1 c.A1411G p.T471A . . . CHI3L2 1117 broad.mit.edu 36 1 111575402 111575402 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025199 exon3 c.C55A p.L19I . . . OVGP1 5016 broad.mit.edu 36 1 111770770 111770770 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002557 exon3 c.C72T p.L24L . . . DDX20 11218 broad.mit.edu 36 1 112106851 112106851 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007204 exon9 c.G1134T p.V378V . . . DDX20 11218 broad.mit.edu 36 1 112109989 112109989 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007204 exon11 c.A1420C p.K474Q . . . KCND3 3752 broad.mit.edu 36 1 112326436 112326436 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_004980 exon2 c.C436T p.R146W . . . CTTNBP2NL 55917 broad.mit.edu 36 1 112800522 112800522 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018704 exon6 c.C885T p.T295T . . . MAGI3 260425 broad.mit.edu 36 1 113966958 113966958 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152900 exon9 c.A1179C p.E393D . . . PHTF1 10745 broad.mit.edu 36 1 114048251 114048251 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006608 exon14 c.C1865T p.S622L . . . AMPD1 270 broad.mit.edu 36 1 115020129 115020129 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000036 exon11 c.G1506T p.K502N . . . NRAS 4893 broad.mit.edu 36 1 115053769 115053769 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002524 exon4 c.G394A p.E132K . . . CSDE1 7812 broad.mit.edu 36 1 115076827 115076827 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130523 exon10 c.G1016A p.R339Q . . . SYCP1 6847 broad.mit.edu 36 1 115204951 115204951 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003176 exon8 c.A596C p.K199T . . . SYCP1 6847 broad.mit.edu 36 1 115255631 115255631 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003176 exon18 c.A1434G p.V478V . . . NGF 4803 broad.mit.edu 36 1 115630812 115630812 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002506 exon3 c.C128T p.S43F . . . IGSF3 3321 broad.mit.edu 36 1 116952290 116952290 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001542 exon5 c.T1019G p.F340C . . . CD2 914 broad.mit.edu 36 1 117098855 117098855 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001767 exon2 c.T141G p.S47R . . . PTGFRN 5738 broad.mit.edu 36 1 117285897 117285897 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020440 exon2 c.G87A p.A29A . . . PTGFRN 5738 broad.mit.edu 36 1 117305669 117305669 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020440 exon5 c.A1495C p.N499H . . . GDAP2 54834 broad.mit.edu 36 1 118264377 118264377 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_017686 exon2 c.C127T p.R43X . . . WDR3 10885 broad.mit.edu 36 1 118278818 118278818 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006784 exon3 c.C371T p.S124F . . . WDR3 10885 broad.mit.edu 36 1 118285306 118285306 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006784 exon8 c.C826T p.R276W . . . SPAG17 200162 broad.mit.edu 36 1 118399899 118399899 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206996 exon19 c.T2702G p.F901C . . . SPAG17 200162 broad.mit.edu 36 1 118399973 118399973 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206996 exon19 c.A2628C p.K876N . . . NPPB 4879 broad.mit.edu 36 1 11841358 11841358 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002521 exon1 c.G120A p.T40T . . . SPAG17 200162 broad.mit.edu 36 1 118425685 118425685 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206996 exon14 c.G1866A p.G622G . . . HAO2 51179 broad.mit.edu 36 1 119729199 119729199 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016527 exon4 c.G561T p.K187N . . . HAO2 51179 broad.mit.edu 36 1 119736325 119736325 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016527 exon6 c.C841T p.R281X . . . NOTCH2 4853 broad.mit.edu 36 1 120313733 120313733 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024408 exon6 c.C1032T p.F344F . . . VPS13D 55187 broad.mit.edu 36 1 12259373 12259373 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon19 c.G3141A p.P1047P . . . VPS13D 55187 broad.mit.edu 36 1 12296891 12296891 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon30 c.G7068A p.T2356T . . . AADACL4 343066 broad.mit.edu 36 1 12648905 12648905 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013630 exon4 c.G796A p.A266T . . . HNRNPCL1 343069 broad.mit.edu 36 1 12830143 12830143 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013631 exon2 c.C587A p.S196Y . . . HNRNPCL1 343069 broad.mit.edu 36 1 12830302 12830302 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013631 exon2 c.C428T p.S143L . . . NOTCH2NL 388677 broad.mit.edu 36 1 143993371 143993371 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203458 exon5 c.G694T p.E232X . . . PEX11B 8799 broad.mit.edu 36 1 144229547 144229547 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184795 exon3 c.G250A p.A84T . . . BCL9 607 broad.mit.edu 36 1 145557987 145557987 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004326 exon8 c.G1402A p.E468K . . . GJA8 2703 broad.mit.edu 36 1 145846932 145846932 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005267 exon2 c.C226T p.R76C . . . SF3B4 10262 broad.mit.edu 36 1 148165020 148165020 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005850 exon3 c.G578A p.R193Q . . . VPS45 11311 broad.mit.edu 36 1 148321503 148321503 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_007259 exon10 c.C1016T p.S339F . . . C1orf51 148523 broad.mit.edu 36 1 148522845 148522845 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144697 exon2 c.G373T p.E125X . . . C1orf51 148523 broad.mit.edu 36 1 148525919 148525919 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144697 exon5 c.A1087G p.T363A . . . RPRD2 23248 broad.mit.edu 36 1 148710176 148710176 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015203 exon11 c.C2128T p.R710C . . . HORMAD1 84072 broad.mit.edu 36 1 148939244 148939244 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199829 exon13 c.C1051T p.R351W . . . CTSS 1520 broad.mit.edu 36 1 148989134 148989134 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004079 exon6 c.T765C p.R255R . . . SETDB1 9869 broad.mit.edu 36 1 149189805 149189805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145415 exon13 c.C1828T p.R610W . . . SEMA6C 10500 broad.mit.edu 36 1 149374360 149374360 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001178061 exon15 c.G1483C p.E495Q . . . PIP5K1A 8394 broad.mit.edu 36 1 149477347 149477347 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003557 exon9 c.A1172C p.D391A . . . SNX27 81609 broad.mit.edu 36 1 149932085 149932085 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030918 exon10 c.C1464T p.F488F . . . MRPL9 65005 broad.mit.edu 36 1 149999214 149999214 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031420 exon7 c.G740T p.R247I . . . LINGO4 339398 broad.mit.edu 36 1 150041572 150041572 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004432 exon2 c.G233A p.G78E . . . THEM4 117145 broad.mit.edu 36 1 150127381 150127381 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053055 exon4 c.T549G p.N183K . . . S100A11 6282 broad.mit.edu 36 1 150271849 150271849 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005620 exon3 c.C231A p.F77L . . . TCHHL1 126637 broad.mit.edu 36 1 150324069 150324069 + Nonstop_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008536 exon3 c.T2713G p.X905G . . . HRNR 388697 broad.mit.edu 36 1 150454265 150454265 + Missense_Mutation SNP G A A rs56055912 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001009931 exon3 c.C6464T p.S2155L . . . FLG 2312 broad.mit.edu 36 1 150542007 150542007 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.C11979A p.H3993Q . . . FLG 2312 broad.mit.edu 36 1 150546785 150546785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.C7201T p.R2401C . . . FLG 2312 broad.mit.edu 36 1 150548091 150548091 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.C5895T p.A1965A . . . FLG 2312 broad.mit.edu 36 1 150548293 150548293 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.C5693T p.S1898L . . . FLG2 388698 broad.mit.edu 36 1 150590779 150590779 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014342 exon3 c.G6107A p.S2036N . . . FLG2 388698 broad.mit.edu 36 1 150591302 150591302 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014342 exon3 c.C5584A p.H1862N . . . CRTC2 200186 broad.mit.edu 36 1 152190397 152190397 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181715 exon11 c.C1367T p.S456L . . . NUP210L 91181 broad.mit.edu 36 1 152293404 152293404 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207308 exon25 c.T3407C p.I1136T . . . NUP210L 91181 broad.mit.edu 36 1 152296007 152296007 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207308 exon23 c.C3148A p.L1050I . . . TDRD10 126668 broad.mit.edu 36 1 152786521 152786521 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182499 exon12 c.C965T p.S322L . . . ADAR 103 broad.mit.edu 36 1 152827732 152827732 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015841 exon10 c.C2669T p.A890V . . . KCNN3 3782 broad.mit.edu 36 1 153108545 153108545 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002249 exon1 c.G520A p.A174T . . . KAZ 23254 broad.mit.edu 36 1 15313593 15313593 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201628 exon15 c.G2203T p.D735Y . . . SCAMP3 10067 broad.mit.edu 36 1 153496776 153496776 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052837 exon3 c.G279A p.E93E . . . TMEM51 55092 broad.mit.edu 36 1 15414356 15414356 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001136216 exon3 c.C186T p.T62T . . . RXFP4 339403 broad.mit.edu 36 1 154179020 154179020 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_181885 exon1 c.A896T p.H299L . . . SMG5 23381 broad.mit.edu 36 1 154488863 154488863 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015327 exon19 c.C2719T p.R907W . . . SMG5 23381 broad.mit.edu 36 1 154515401 154515401 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015327 exon2 c.A123T p.K41N . . . C1orf66 51093 broad.mit.edu 36 1 154973050 154973050 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015997 exon8 c.T1309A p.F437I . . . CD5L 922 broad.mit.edu 36 1 156069727 156069727 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005894 exon5 c.C918T p.G306G . . . CTRC 11330 broad.mit.edu 36 1 15642528 15642528 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007272 exon5 c.A384G p.A128A . . . OR10X1 128367 broad.mit.edu 36 1 156815803 156815803 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004477 exon1 c.A511G p.I171V . . . OR10X1 128367 broad.mit.edu 36 1 156816235 156816235 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004477 exon1 c.G79A p.E27K . . . OR10Z1 128368 broad.mit.edu 36 1 156843558 156843558 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004478 exon1 c.A706G p.K236E . . . SPTA1 6708 broad.mit.edu 36 1 156879310 156879310 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon32 c.A4523G p.D1508G . . . OR6K2 81448 broad.mit.edu 36 1 156936178 156936178 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005279 exon1 c.G889T p.E297X . . . OR6N2 81442 broad.mit.edu 36 1 157013405 157013405 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005278 exon1 c.G645T p.M215I . . . CADM3 57863 broad.mit.edu 36 1 157430384 157430384 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021189 exon6 c.C723T p.I241I . . . CADM3 57863 broad.mit.edu 36 1 157433423 157433423 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021189 exon8 c.G1003T p.A335S . . . OR10J3 441911 broad.mit.edu 36 1 157550129 157550129 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004467 exon1 c.G945T p.K315N . . . OR10J1 26476 broad.mit.edu 36 1 157676347 157676347 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012351 exon1 c.A175G p.I59V . . . OR10J1 26476 broad.mit.edu 36 1 157676570 157676570 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012351 exon1 c.G398A p.R133H . . . OR10J5 127385 broad.mit.edu 36 1 157771639 157771639 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004469 exon1 c.G783A p.P261P . . . SLAMF8 56833 broad.mit.edu 36 1 158063318 158063318 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020125 exon1 c.C6A p.V2V . . . IGSF8 93185 broad.mit.edu 36 1 158330298 158330298 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052868 exon3 c.C730T p.R244C . . . ATP1A2 477 broad.mit.edu 36 1 158366889 158366889 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000702 exon13 c.G1705A p.D569N . . . ATP1A2 477 broad.mit.edu 36 1 158371652 158371652 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000702 exon15 c.C2058A p.V686V . . . ATP1A2 477 broad.mit.edu 36 1 158373036 158373036 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000702 exon19 c.G2616A p.E872E . . . ATP1A4 480 broad.mit.edu 36 1 158391566 158391566 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144699 exon3 c.C315T p.F105F . . . ATP1A4 480 broad.mit.edu 36 1 158410657 158410657 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144699 exon14 c.C2124T p.V708V . . . NCSTN 23385 broad.mit.edu 36 1 158586574 158586574 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015331 exon5 c.G492A p.W164X . . . RSC1A1 6248 broad.mit.edu 36 1 15860008 15860008 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006511 exon1 c.C1058T p.T353M . . . VANGL2 57216 broad.mit.edu 36 1 158655580 158655580 + Silent SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020335 exon4 c.T357A p.S119S . . . SLAMF1 6504 broad.mit.edu 36 1 158873937 158873937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003037 exon2 c.G83A p.R28H . . . SLAMF7 57823 broad.mit.edu 36 1 158987794 158987794 + Missense_Mutation SNP C T T rs34099422 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021181 exon5 c.C805T p.R269W . . . LY9 4063 broad.mit.edu 36 1 159051096 159051096 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002348 exon4 c.C993T p.D331D . . . LY9 4063 broad.mit.edu 36 1 159054721 159054721 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002348 exon6 c.C1432T p.R478X . . . CD244 51744 broad.mit.edu 36 1 159077909 159077909 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166663 exon3 c.C385A p.L129M . . . NR1I3 9970 broad.mit.edu 36 1 159469699 159469699 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077482 exon4 c.C292T p.R98W . . . FCRLA 84824 broad.mit.edu 36 1 159949634 159949634 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184870 exon4 c.C569A p.S190Y . . . ATF6 22926 broad.mit.edu 36 1 160028556 160028556 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007348 exon6 c.A503C p.K168T . . . ATF6 22926 broad.mit.edu 36 1 160038473 160038473 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007348 exon7 c.G696A p.T232T . . . OLFML2B 25903 broad.mit.edu 36 1 160236698 160236698 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015441 exon5 c.G778A p.E260K . . . OLFML2B 25903 broad.mit.edu 36 1 160259777 160259777 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015441 exon1 c.T68G p.I23S . . . C1orf111 284680 broad.mit.edu 36 1 160611004 160611004 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182581 exon3 c.G244A p.G82R . . . DDR2 4921 broad.mit.edu 36 1 161015127 161015127 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014796 exon18 c.G2417A p.R806Q . . . SPEN 23013 broad.mit.edu 36 1 16115279 16115279 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015001 exon6 c.G1313T p.R438I . . . SPEN 23013 broad.mit.edu 36 1 16127692 16127692 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015001 exon11 c.G2370T p.K790N . . . SPEN 23013 broad.mit.edu 36 1 16129283 16129283 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015001 exon11 c.G3961A p.A1321T . . . SPEN 23013 broad.mit.edu 36 1 16132341 16132341 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015001 exon11 c.G7019A p.R2340H . . . NUF2 83540 broad.mit.edu 36 1 161576835 161576835 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031423 exon9 c.C664T p.R222C . . . NUF2 83540 broad.mit.edu 36 1 161580238 161580238 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031423 exon10 c.A761G p.Y254C . . . RXRG 6258 broad.mit.edu 36 1 163645543 163645543 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006917 exon7 c.G922T p.E308X . . . CDK11B 984 broad.mit.edu 36 1 1644054 1644054 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033486 exon2 c.C64T p.R22X . . . FBXO42 54455 broad.mit.edu 36 1 16454869 16454869 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018994 exon6 c.C691T p.P231S . . . TADA1 117143 broad.mit.edu 36 1 165093518 165093518 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053053 exon8 c.G918A p.T306T . . . MAEL 84944 broad.mit.edu 36 1 165257020 165257020 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032858 exon11 c.T1116C p.I372I . . . DCAF6 55827 broad.mit.edu 36 1 166227174 166227174 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198957 exon5 c.C568T p.R190W . . . NME7 29922 broad.mit.edu 36 1 167534512 167534512 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_197972 exon6 c.G446A p.R149H . . . F5 2153 broad.mit.edu 36 1 167754362 167754362 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000130 exon23 c.C6257T p.S2086L . . . SELP 6403 broad.mit.edu 36 1 167829532 167829532 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003005 exon14 c.C2342A p.S781Y . . . SELP 6403 broad.mit.edu 36 1 167847358 167847358 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003005 exon7 c.T1143C p.C381C . . . C1orf112 55732 broad.mit.edu 36 1 168039859 168039859 + De_novo_Start_OutOfFrame SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018186 exon6 c.C332A p.S111Y . . . SCYL3 57147 broad.mit.edu 36 1 168090299 168090299 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181093 exon13 c.C1905T p.I635I . . . C1orf129 80133 broad.mit.edu 36 1 169183295 169183295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025063 exon3 c.G29A p.S10N . . . C1orf129 80133 broad.mit.edu 36 1 169233955 169233955 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025063 exon15 c.G1512T p.E504D . . . FMO3 2328 broad.mit.edu 36 1 169343524 169343524 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002294 exon4 c.G406T p.E136X . . . FMO3 2328 broad.mit.edu 36 1 169349814 169349814 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002294 exon7 c.A871C p.S291R . . . FMO3 2328 broad.mit.edu 36 1 169353137 169353137 + Missense_Mutation SNP C A A rs28363595 byFrequency TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002294 exon9 c.C1530A p.F510L . . . FMO2 2327 broad.mit.edu 36 1 169444617 169444617 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001460 exon9 c.C1317T p.L439L . . . FMO1 2326 broad.mit.edu 36 1 169516727 169516727 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002021 exon6 c.A806G p.Y269C . . . BAT2L2 23215 broad.mit.edu 36 1 169777449 169777449 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015172 exon16 c.G4214A p.R1405Q . . . VAMP4 8674 broad.mit.edu 36 1 169946503 169946503 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185127 exon5 c.G236T p.R79I . . . VAMP4 8674 broad.mit.edu 36 1 169964332 169964332 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185127 exon3 c.G68T p.R23I . . . DNM3 26052 broad.mit.edu 36 1 170274107 170274107 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015569 exon7 c.C875T p.T292I . . . GNB1 2782 broad.mit.edu 36 1 1711796 1711796 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002074 exon9 c.C597T p.F199F . . . TNFSF18 8995 broad.mit.edu 36 1 171277430 171277430 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005092 exon3 c.C300T p.C100C . . . PRDX6 9588 broad.mit.edu 36 1 171721184 171721184 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004905 exon3 c.A314G p.D105G . . . SLC9A11 284525 broad.mit.edu 36 1 171765768 171765768 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178527 exon18 c.C2212T p.R738C . . . SLC9A11 284525 broad.mit.edu 36 1 171769476 171769476 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178527 exon17 c.C2058A p.I686I . . . SLC9A11 284525 broad.mit.edu 36 1 171784260 171784260 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178527 exon12 c.A1352G p.H451R . . . ANKRD45 339416 broad.mit.edu 36 1 171862849 171862849 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198493 exon4 c.G569A p.G190E . . . KLHL20 27252 broad.mit.edu 36 1 171992886 171992886 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014458 exon7 c.C1116T p.G372G . . . RC3H1 149041 broad.mit.edu 36 1 172197578 172197578 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172071 exon11 c.T2110A p.Y704N . . . RC3H1 149041 broad.mit.edu 36 1 172219295 172219295 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172071 exon3 c.G476A p.R159Q . . . GPR52 9293 broad.mit.edu 36 1 172684624 172684624 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005684 exon1 c.C752A p.S251Y . . . TNN 63923 broad.mit.edu 36 1 173352799 173352799 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022093 exon10 c.C2221T p.R741C . . . TNR 7143 broad.mit.edu 36 1 173592177 173592177 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003285 exon16 c.C3019T p.R1007W . . . TNR 7143 broad.mit.edu 36 1 173638915 173638915 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003285 exon4 c.C960T p.G320G . . . TNR 7143 broad.mit.edu 36 1 173642020 173642020 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003285 exon3 c.C454T p.R152X . . . RFWD2 64326 broad.mit.edu 36 1 174442340 174442340 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022457 exon1 c.A398G p.D133G . . . PAPPA2 60676 broad.mit.edu 36 1 174792206 174792206 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020318 exon2 c.A125C p.Q42P . . . PAPPA2 60676 broad.mit.edu 36 1 174792362 174792362 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020318 exon2 c.G281A p.R94H . . . PAPPA2 60676 broad.mit.edu 36 1 175005429 175005429 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020318 exon16 c.G4387A p.D1463N . . . FAM5B 57795 broad.mit.edu 36 1 175516362 175516362 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021165 exon8 c.G1427A p.R476H . . . SEC16B 89866 broad.mit.edu 36 1 176183687 176183687 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033127 exon13 c.A1559C p.K520T . . . RASAL2 9462 broad.mit.edu 36 1 176693812 176693812 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170692 exon14 c.C2762T p.S921L . . . FAM20B 9917 broad.mit.edu 36 1 177300185 177300185 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014864 exon6 c.G869A p.R290H . . . ABL2 27 broad.mit.edu 36 1 177344975 177344975 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168239 exon11 c.G1942A p.E648K . . . C1orf125 126859 broad.mit.edu 36 1 177646959 177646959 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144696 exon12 c.G1165T p.D389Y . . . C1orf125 126859 broad.mit.edu 36 1 177704399 177704399 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144696 exon17 c.C1997T p.S666L . . . NPHS2 7827 broad.mit.edu 36 1 177792838 177792838 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014625 exon5 c.C685T p.R229X . . . QSOX1 5768 broad.mit.edu 36 1 178432374 178432374 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002826 exon12 c.A1823C p.K608T . . . ACBD6 84320 broad.mit.edu 36 1 178728065 178728065 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032360 exon3 c.G346A p.A116T . . . XPR1 9213 broad.mit.edu 36 1 179039154 179039154 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001135669 exon4 c.C231T p.L77L . . . XPR1 9213 broad.mit.edu 36 1 179039245 179039245 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135669 exon4 c.C322T p.R108X . . . XPR1 9213 broad.mit.edu 36 1 179119775 179119775 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135669 exon14 c.C1846T p.R616C . . . CACNA1E 777 broad.mit.edu 36 1 179991112 179991112 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000721 exon28 c.C3945A p.F1315L . . . CACNA1E 777 broad.mit.edu 36 1 180030690 180030690 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000721 exon45 c.C5966T p.S1989L . . . ACTL8 81569 broad.mit.edu 36 1 18025145 18025145 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030812 exon3 c.G645A p.P215P . . . RNASEL 6041 broad.mit.edu 36 1 180822260 180822260 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021133 exon2 c.C305T p.A102V . . . RGS16 6004 broad.mit.edu 36 1 180837870 180837870 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002928 exon4 c.G241A p.A81T . . . DHX9 1660 broad.mit.edu 36 1 181095788 181095788 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001357 exon12 c.T1178G p.F393C . . . LAMC2 3918 broad.mit.edu 36 1 181456668 181456668 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018891 exon5 c.C589T p.R197C . . . LAMC2 3918 broad.mit.edu 36 1 181478962 181478962 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005562 exon23 c.G3386A p.R1129Q . . . GLT25D2 23127 broad.mit.edu 36 1 182180038 182180038 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015101 exon10 c.G1312A p.D438N . . . GLT25D2 23127 broad.mit.edu 36 1 182209423 182209423 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015101 exon4 c.C577T p.L193L . . . GLT25D2 23127 broad.mit.edu 36 1 182210888 182210888 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015101 exon3 c.G458A p.R153Q . . . FAM129A 116496 broad.mit.edu 36 1 183120431 183120431 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052966 exon5 c.T560G p.F187C . . . HMCN1 83872 broad.mit.edu 36 1 184145252 184145252 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031935 exon5 c.G782A p.R261H . . . PRG4 10216 broad.mit.edu 36 1 184544618 184544618 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127709 exon5 c.G2865A p.T955T . . . TPR 7175 broad.mit.edu 36 1 184556171 184556171 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003292 exon46 c.C6464T p.S2155L . . . TPR 7175 broad.mit.edu 36 1 184587127 184587127 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003292 exon20 c.A2568C p.E856D . . . FAM5C 339479 broad.mit.edu 36 1 188334472 188334472 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199051 exon8 c.C1600T p.L534F . . . TAS1R2 80834 broad.mit.edu 36 1 19054055 19054055 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_152232 exon3 c.G496A p.A166T . . . TROVE2 6738 broad.mit.edu 36 1 191317991 191317991 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173524 exon7 c.T1256G p.M419R . . . CDC73 79577 broad.mit.edu 36 1 191365961 191365961 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024529 exon3 c.G272A p.R91Q . . . B3GALT2 8707 broad.mit.edu 36 1 191416908 191416908 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003783 exon2 c.C408A p.F136L . . . B3GALT2 8707 broad.mit.edu 36 1 191417114 191417114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003783 exon2 c.C202T p.R68W . . . KCNT2 343450 broad.mit.edu 36 1 194569677 194569677 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198503 exon17 c.G1920A p.S640S . . . AKR7L 246181 broad.mit.edu 36 1 19466446 19466446 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001145289 exon5 c.G734T p.C245F . . . CFHR4 10877 broad.mit.edu 36 1 195138321 195138321 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006684 exon2 c.A209G p.Y70C . . . CFHR4 10877 broad.mit.edu 36 1 195150339 195150339 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006684 exon4 c.C531T p.Y177Y . . . CFHR5 81494 broad.mit.edu 36 1 195244389 195244389 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030787 exon10 c.C1663T p.R555X . . . ASPM 259266 broad.mit.edu 36 1 195337746 195337746 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018136 exon18 c.T7258C p.S2420P . . . ASPM 259266 broad.mit.edu 36 1 195338592 195338592 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018136 exon18 c.A6412G p.T2138A . . . ASPM 259266 broad.mit.edu 36 1 195340604 195340604 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018136 exon18 c.C4400T p.S1467F . . . ZBTB41 360023 broad.mit.edu 36 1 195436019 195436019 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194314 exon1 c.A208C p.N70H . . . CRB1 23418 broad.mit.edu 36 1 195657028 195657028 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201253 exon6 c.G1447A p.A483T . . . CRB1 23418 broad.mit.edu 36 1 195657330 195657330 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201253 exon6 c.C1749T p.I583I . . . CRB1 23418 broad.mit.edu 36 1 195663373 195663373 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201253 exon7 c.C2295T p.V765V . . . PTPRC 5788 broad.mit.edu 36 1 196954006 196954006 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080921 exon11 c.C1122T p.C374C . . . KIF14 9928 broad.mit.edu 36 1 198839660 198839660 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014875 exon9 c.G1793A p.R598Q . . . CACNA1S 779 broad.mit.edu 36 1 199329755 199329755 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000069 exon3 c.C276A p.F92L . . . LAD1 3898 broad.mit.edu 36 1 199620571 199620571 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005558 exon5 c.G1147T p.E383X . . . IPO9 55705 broad.mit.edu 36 1 200092906 200092906 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018085 exon11 c.C1182A p.F394L . . . PPP1R12B 4660 broad.mit.edu 36 1 200666486 200666486 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167857 exon7 c.G926A p.R309Q . . . SYT2 127833 broad.mit.edu 36 1 200841377 200841377 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177402 exon2 c.G147T p.E49D . . . PPFIA4 8497 broad.mit.edu 36 1 201292210 201292210 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015053 exon5 c.C673T p.R225W . . . PPFIA4 8497 broad.mit.edu 36 1 201296048 201296048 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015053 exon9 c.G1146T p.S382S . . . CHI3L1 1116 broad.mit.edu 36 1 201420359 201420359 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001276 exon4 c.G282C p.L94F . . . SNRPE 6635 broad.mit.edu 36 1 202097970 202097970 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003094 exon2 c.A78C p.Q26H . . . NFASC 23114 broad.mit.edu 36 1 203180144 203180144 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160331 exon1 c.A78C p.E26D . . . NFASC 23114 broad.mit.edu 36 1 203210522 203210522 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160331 exon12 c.C1539T p.V513V . . . RBBP5 5929 broad.mit.edu 36 1 203340843 203340843 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005057 exon4 c.G295A p.D99N . . . PLA2G2F 64600 broad.mit.edu 36 1 20342633 20342633 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022819 exon3 c.C277T p.L93L . . . CDK18 5129 broad.mit.edu 36 1 203758949 203758949 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212503 exon2 c.C31T p.R11C . . . ELK4 2005 broad.mit.edu 36 1 203855731 203855731 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001973 exon3 c.G1066A p.A356T . . . RAB7L1 8934 broad.mit.edu 36 1 204007366 204007366 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135662 exon4 c.C235T p.R79W . . . SLC26A9 115019 broad.mit.edu 36 1 204165707 204165707 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134325 exon6 c.C653T p.S218L . . . C1orf186 440712 broad.mit.edu 36 1 204408272 204408272 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001007544 exon4 c.C140T p.A47V . . . CTSE 1510 broad.mit.edu 36 1 204484254 204484254 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001910 exon1 c.G55A p.G19R . . . DYRK3 8444 broad.mit.edu 36 1 204888250 204888250 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003582 exon3 c.G1084A p.E362K . . . MAPKAPK2 9261 broad.mit.edu 36 1 204969372 204969372 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032960 exon4 c.G493A p.E165K . . . IL20 50604 broad.mit.edu 36 1 205105947 205105947 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018724 exon1 c.C127T p.R43X . . . CR2 1380 broad.mit.edu 36 1 205708792 205708792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006658 exon4 c.G659A p.R220Q . . . CR2 1380 broad.mit.edu 36 1 205710971 205710971 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006658 exon8 c.C1409T p.A470V . . . CR1L 1379 broad.mit.edu 36 1 205918233 205918233 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175710 exon3 c.C345T p.F115F . . . CR1L 1379 broad.mit.edu 36 1 205957494 205957494 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175710 exon11 c.G1477T p.D493Y . . . LAMB3 3914 broad.mit.edu 36 1 207869737 207869737 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017402 exon9 c.G1100A p.R367H . . . IRF6 3664 broad.mit.edu 36 1 208036421 208036421 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006147 exon4 c.G274A p.E92K . . . C1orf107 27042 broad.mit.edu 36 1 208070863 208070863 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014388 exon3 c.G240A p.K80K . . . C1orf107 27042 broad.mit.edu 36 1 208077063 208077063 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014388 exon6 c.A946C p.N316H . . . PINK1 65018 broad.mit.edu 36 1 20844756 20844756 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032409 exon5 c.C1076T p.A359V . . . SERTAD4 56256 broad.mit.edu 36 1 208482208 208482208 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019605 exon4 c.G974T p.R325I . . . DTL 51514 broad.mit.edu 36 1 210340742 210340742 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016448 exon14 c.A1787C p.E596A . . . EIF4G3 8672 broad.mit.edu 36 1 21059557 21059557 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003760 exon19 c.C2984A p.T995N . . . FAM71A 149647 broad.mit.edu 36 1 210866091 210866091 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153606 exon1 c.G1249A p.A417T . . . TATDN3 128387 broad.mit.edu 36 1 211055078 211055078 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146171 exon10 c.C803T p.A268V . . . ANGEL2 90806 broad.mit.edu 36 1 211245217 211245217 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144567 exon5 c.C915T p.C305C . . . ANGEL2 90806 broad.mit.edu 36 1 211245326 211245326 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144567 exon5 c.A806G p.N269S . . . CENPF 1063 broad.mit.edu 36 1 212860763 212860763 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon6 c.G716A p.R239K . . . CENPF 1063 broad.mit.edu 36 1 212885657 212885657 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon13 c.G6121A p.E2041K . . . CENPF 1063 broad.mit.edu 36 1 212887343 212887343 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon13 c.G7807A p.D2603N . . . KCTD3 51133 broad.mit.edu 36 1 213826468 213826468 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016121 exon9 c.G634T p.E212X . . . USH2A 7399 broad.mit.edu 36 1 213968346 213968346 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon61 c.C11715T p.R3905R . . . USH2A 7399 broad.mit.edu 36 1 214107108 214107108 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_206933 exon44 c.C8709T p.F2903F . . . USH2A 7399 broad.mit.edu 36 1 214205295 214205295 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon37 c.C7107A p.F2369L . . . SPATA17 128153 broad.mit.edu 36 1 216014471 216014471 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138796 exon7 c.T692G p.I231S . . . TGFB2 7042 broad.mit.edu 36 1 216645240 216645240 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003238 exon2 c.C453A p.V151V . . . EPRS 2058 broad.mit.edu 36 1 218237138 218237138 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004446 exon18 c.T2351G p.L784R . . . RAB3GAP2 25782 broad.mit.edu 36 1 218393368 218393368 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012414 exon33 c.T3649G p.L1217V . . . RAB3GAP2 25782 broad.mit.edu 36 1 218450375 218450375 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012414 exon7 c.G590A p.R197Q . . . HLX 3142 broad.mit.edu 36 1 219121239 219121239 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021958 exon2 c.G673A p.A225T . . . USP48 84196 broad.mit.edu 36 1 21928852 21928852 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032730 exon10 c.G1232A p.R411Q . . . USP48 84196 broad.mit.edu 36 1 21956842 21956842 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032730 exon2 c.G156A p.P52P . . . HHIPL2 79802 broad.mit.edu 36 1 220771978 220771978 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024746 exon6 c.T1676C p.I559T . . . MIA3 375056 broad.mit.edu 36 1 220868253 220868253 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198551 exon4 c.G1068T p.Q356H . . . DISP1 84976 broad.mit.edu 36 1 221183129 221183129 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon2 c.C341T p.S114L . . . SUSD4 55061 broad.mit.edu 36 1 221504747 221504747 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037175 exon5 c.T572C p.V191A . . . DNAH14 127602 broad.mit.edu 36 1 223218877 223218877 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144989 exon5 c.G441A p.P147P . . . LBR 3930 broad.mit.edu 36 1 223673693 223673693 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194442 exon5 c.G535T p.E179X . . . ACBD3 64746 broad.mit.edu 36 1 224420238 224420238 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022735 exon2 c.A373C p.N125H . . . PARP1 142 broad.mit.edu 36 1 224615807 224615807 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001618 exon23 c.A3022T p.N1008Y . . . CDC42BPA 8476 broad.mit.edu 36 1 225571364 225571364 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014826 exon1 c.G143A p.R48K . . . ZNF678 339500 broad.mit.edu 36 1 225909297 225909297 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178549 exon4 c.A888C p.E296D . . . ZNF678 339500 broad.mit.edu 36 1 225909558 225909558 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178549 exon4 c.A1149C p.K383N . . . OBSCN 84033 broad.mit.edu 36 1 226504298 226504298 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052843 exon14 c.C4043T p.A1348V . . . OBSCN 84033 broad.mit.edu 36 1 226572047 226572048 + Missense_Mutation DNP GG TT TT novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 GG GG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052843 exon52 c.13821_13822TT . . . . ZBTB40 9923 broad.mit.edu 36 1 22711196 22711196 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014870 exon11 c.G2443A p.E815K . . . NUP133 55746 broad.mit.edu 36 1 227667206 227667206 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018230 exon18 c.G2339A p.R780H . . . URB2 9816 broad.mit.edu 36 1 227830044 227830044 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014777 exon2 c.G41A p.S14N . . . TTC13 79573 broad.mit.edu 36 1 229128011 229128011 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024525 exon13 c.T1463G p.V488G . . . TTC13 79573 broad.mit.edu 36 1 229142906 229142906 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024525 exon7 c.G692A p.R231Q . . . C1orf124 83932 broad.mit.edu 36 1 229553887 229553887 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010984 exon4 c.G665A p.G222D . . . SIPA1L2 57568 broad.mit.edu 36 1 230663438 230663438 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020808 exon8 c.C2913T p.V971V . . . KIAA1383 54627 broad.mit.edu 36 1 231008581 231008581 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019090 exon1 c.G1189A p.E397K . . . KIAA1383 54627 broad.mit.edu 36 1 231009219 231009219 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019090 exon1 c.G1827T p.K609N . . . PCNXL2 80003 broad.mit.edu 36 1 231227525 231227525 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014801 exon26 c.A4595G p.Y1532C . . . PCNXL2 80003 broad.mit.edu 36 1 231464490 231464490 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014801 exon3 c.G404A p.R135Q . . . ARID4B 51742 broad.mit.edu 36 1 233411794 233411794 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031371 exon19 c.T2805G p.N935K . . . B3GALNT2 148789 broad.mit.edu 36 1 233688581 233688581 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152490 exon8 c.C978T p.V326V . . . LYST 1130 broad.mit.edu 36 1 234036035 234036035 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000081 exon6 c.G3024T p.E1008D . . . LYST 1130 broad.mit.edu 36 1 234038638 234038638 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000081 exon5 c.T2103C p.F701F . . . NID1 4811 broad.mit.edu 36 1 234211597 234211597 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002508 exon16 c.G3164A p.R1055H . . . EDARADD 128178 broad.mit.edu 36 1 234712339 234712339 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145861 exon6 c.T415C p.W139R . . . LGALS8 3964 broad.mit.edu 36 1 234768843 234768843 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201544 exon4 c.G176A p.R59Q . . . HEATR1 55127 broad.mit.edu 36 1 234802375 234802375 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018072 exon26 c.T3666C p.S1222S . . . ACTN2 88 broad.mit.edu 36 1 234979178 234979178 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001103 exon14 c.G1647A p.E549E . . . ACTN2 88 broad.mit.edu 36 1 234984949 234984949 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103 exon17 c.C1982T p.A661V . . . ACTN2 88 broad.mit.edu 36 1 234987495 234987495 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103 exon18 c.G2241A p.A747A . . . ZNF436 80818 broad.mit.edu 36 1 23562168 23562168 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_030634 exon3 c.C294T p.S98S . . . RYR2 6262 broad.mit.edu 36 1 235778479 235778479 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon26 c.G3032A p.R1011Q . . . RYR2 6262 broad.mit.edu 36 1 235873261 235873261 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon48 c.C7233T p.A2411A . . . RYR2 6262 broad.mit.edu 36 1 235931936 235931936 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon66 c.A9403G p.T3135A . . . RYR2 6262 broad.mit.edu 36 1 236015907 236015907 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon91 c.G13276T p.E4426X . . . RYR2 6262 broad.mit.edu 36 1 236021420 236021420 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon93 c.C13545A p.F4515L . . . RYR2 6262 broad.mit.edu 36 1 236049018 236049018 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon101 c.C14493T p.I4831I . . . CHRM3 1131 broad.mit.edu 36 1 238138001 238138001 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000740 exon5 c.C627A p.Y209X . . . FMN2 56776 broad.mit.edu 36 1 238407958 238407958 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020066 exon3 c.G1897A p.D633N . . . RGS7 6000 broad.mit.edu 36 1 239041845 239041845 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002924 exon14 c.T1078G p.L360V . . . KMO 8564 broad.mit.edu 36 1 239796500 239796500 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003679 exon9 c.G774T p.Q258H . . . OPN3 23596 broad.mit.edu 36 1 239834454 239834454 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014322 exon2 c.C424T p.R142C . . . CEP170 9859 broad.mit.edu 36 1 241369885 241369885 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042405 exon15 c.C3835T p.R1279W . . . CEP170 9859 broad.mit.edu 36 1 241430448 241430448 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042405 exon6 c.C491A p.A164D . . . C1orf100 200159 broad.mit.edu 36 1 242608532 242608532 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012970 exon4 c.G293A p.R98Q . . . ADSS 159 broad.mit.edu 36 1 242641242 242641242 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126 exon12 c.C1288T p.R430X . . . KIF26B 55083 broad.mit.edu 36 1 243770735 243770735 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018012 exon5 c.C1210T p.R404W . . . KIF26B 55083 broad.mit.edu 36 1 243928883 243928883 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018012 exon14 c.G6099A p.A2033A . . . SMYD3 64754 broad.mit.edu 36 1 244560455 244560455 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022743 exon4 c.G167T p.G56V . . . ZNF670 93474 broad.mit.edu 36 1 245267486 245267486 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033213 exon4 c.G1058A p.R353Q . . . ZNF670 93474 broad.mit.edu 36 1 245268276 245268276 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033213 exon4 c.T268C p.L90L . . . ZNF124 7678 broad.mit.edu 36 1 245386631 245386631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003431 exon4 c.C730T p.R244C . . . VN1R5 317705 broad.mit.edu 36 1 245486100 245486100 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_173858 exon1 c.A104C p.K35T . . . NLRP3 114548 broad.mit.edu 36 1 245654649 245654649 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004895 exon3 c.G1281A p.E427E . . . NLRP3 114548 broad.mit.edu 36 1 245655205 245655205 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004895 exon3 c.G1837T p.E613X . . . OR2B11 127623 broad.mit.edu 36 1 245681131 245681131 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004492 exon1 c.G777A p.A259A . . . OR2T8 343172 broad.mit.edu 36 1 246151702 246151702 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005522 exon1 c.A760G p.I254V . . . OR2L8 391190 broad.mit.edu 36 1 246179699 246179699 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001963 exon1 c.G917T p.R306I . . . OR2AK2 391191 broad.mit.edu 36 1 246196026 246196026 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004491 exon1 c.C770A p.S257Y . . . OR2L3 391192 broad.mit.edu 36 1 246291307 246291307 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004687 exon1 c.A701C p.K234T . . . OR2L3 391192 broad.mit.edu 36 1 246291400 246291400 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004687 exon1 c.G794A p.R265Q . . . OR2M2 391194 broad.mit.edu 36 1 246409994 246409994 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004688 exon1 c.C84A p.F28L . . . OR2M2 391194 broad.mit.edu 36 1 246410808 246410808 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004688 exon1 c.G898A p.A300T . . . OR2G6 391211 broad.mit.edu 36 1 246752456 246752456 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001013355 exon1 c.G886T p.D296Y . . . OR2T11 127077 broad.mit.edu 36 1 246856547 246856547 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001964 exon1 c.G506A p.R169Q . . . CLIC4 25932 broad.mit.edu 36 1 25013205 25013205 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013943 exon3 c.G216A p.G72G . . . RHCE 6006 broad.mit.edu 36 1 25601801 25601802 + Missense_Mutation DNP GC AT AT novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 GC GC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138617 exon3 c.358_359AT . . . . RPS6KA1 6195 broad.mit.edu 36 1 26773181 26773181 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006665 exon21 c.G2137A p.A713T . . . SLC9A1 6548 broad.mit.edu 36 1 27353156 27353156 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003047 exon1 c.G257A p.R86H . . . AHDC1 27245 broad.mit.edu 36 1 27749312 27749312 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001029882 exon6 c.G1902A p.P634P . . . STX12 23673 broad.mit.edu 36 1 28000812 28000812 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177424 exon4 c.G325T p.D109Y . . . GMEB1 10691 broad.mit.edu 36 1 28909717 28909717 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006582 exon9 c.G997T p.E333X . . . EPB41 2035 broad.mit.edu 36 1 29232209 29232209 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203342 exon10 c.T603C p.D201D . . . EPB41 2035 broad.mit.edu 36 1 29252213 29252213 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203342 exon13 c.C1020T p.V340V . . . PTPRU 10076 broad.mit.edu 36 1 29457649 29457649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005704 exon3 c.G251A p.R84Q . . . PTPRU 10076 broad.mit.edu 36 1 29524719 29524719 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005704 exon31 c.G4300A p.D1434N . . . KPNA6 23633 broad.mit.edu 36 1 32408957 32408957 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012316 exon14 c.G1486A p.D496N . . . SYNC 81493 broad.mit.edu 36 1 32933198 32933198 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001161708 exon2 c.G1088T p.R363I . . . CSMD2 114784 broad.mit.edu 36 1 33863329 33863329 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon34 c.C5289T p.S1763S . . . CSMD2 114784 broad.mit.edu 36 1 33901219 33901219 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon26 c.G3993A p.G1331G . . . CSMD2 114784 broad.mit.edu 36 1 34026862 34026862 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon12 c.C1469T p.T490I . . . CSMD2 114784 broad.mit.edu 36 1 34057922 34057922 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon9 c.G1183A p.D395N . . . ZMYM6 9204 broad.mit.edu 36 1 35225831 35225831 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007167 exon16 c.T3439G p.F1147V . . . SFPQ 6421 broad.mit.edu 36 1 35425423 35425423 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005066 exon8 c.G1832A p.R611Q . . . ZMYM4 9202 broad.mit.edu 36 1 35619737 35619737 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005095 exon9 c.C1360T p.R454X . . . ZMYM4 9202 broad.mit.edu 36 1 35627259 35627259 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005095 exon14 c.T2425G p.L809V . . . MAP7D1 55700 broad.mit.edu 36 1 36413151 36413151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018067 exon6 c.C805T p.R269W . . . THRAP3 9967 broad.mit.edu 36 1 36524603 36524603 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005119 exon4 c.G185A p.R62K . . . CSF3R 1441 broad.mit.edu 36 1 36710743 36710743 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172313 exon7 c.C805T p.R269C . . . GRIK3 2899 broad.mit.edu 36 1 37118855 37118855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000831 exon3 c.C517T p.R173W . . . DFFB 1677 broad.mit.edu 36 1 3790039 3790039 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004402 exon7 c.G891T p.E297D . . . CDCA8 55143 broad.mit.edu 36 1 37945244 37945244 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018101 exon10 c.G719A p.R240Q . . . C1orf174 339448 broad.mit.edu 36 1 3797008 3797008 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207356 exon3 c.C603T p.N201N . . . UTP11L 51118 broad.mit.edu 36 1 38261835 38261835 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016037 exon8 c.A710C p.E237A . . . MACF1 23499 broad.mit.edu 36 1 39571489 39571489 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033044 exon1 c.G1962A p.K654K . . . KIAA0754 643314 broad.mit.edu 36 1 39649440 39649440 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015038 exon1 c.C916T p.L306F . . . MACF1 23499 broad.mit.edu 36 1 39692056 39692056 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012090 exon85 c.T14656C p.C4886R . . . RLF 6018 broad.mit.edu 36 1 40460844 40460844 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012421 exon6 c.C822T p.V274V . . . RLF 6018 broad.mit.edu 36 1 40474812 40474812 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012421 exon8 c.G1851T p.K617N . . . TMCO2 127391 broad.mit.edu 36 1 40489639 40489639 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008740 exon2 c.G335A p.R112Q . . . ZMPSTE24 10269 broad.mit.edu 36 1 40506723 40506723 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005857 exon4 c.G403A p.A135T . . . ZNF643 65243 broad.mit.edu 36 1 40700731 40700731 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023070 exon5 c.C488T p.S163L . . . ZNF643 65243 broad.mit.edu 36 1 40701727 40701727 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023070 exon5 c.G1484T p.R495I . . . ZNF642 339559 broad.mit.edu 36 1 40734146 40734146 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198494 exon6 c.A1409G p.N470S . . . CCDC30 728621 broad.mit.edu 36 1 42827626 42827626 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080850 exon9 c.C1268T p.T423I . . . PPIH 10465 broad.mit.edu 36 1 42904273 42904273 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006347 exon7 c.C372A p.F124L . . . YBX1 4904 broad.mit.edu 36 1 42939236 42939236 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004559 exon7 c.C938T p.S313L . . . CCDC23 374969 broad.mit.edu 36 1 43054774 43054774 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199342 exon2 c.C29A p.T10N . . . KIAA0467 23334 broad.mit.edu 36 1 43675454 43675454 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015284 exon28 c.G3363A p.A1121A . . . RPS8 6202 broad.mit.edu 36 1 45014363 45014363 + Silent SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012 exon2 c.G75C p.R25R . . . MKNK1 8569 broad.mit.edu 36 1 46799815 46799815 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198973 exon11 c.C927A p.L309L . . . KIAA0494 9813 broad.mit.edu 36 1 46956194 46956194 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014774 exon1 c.C153T p.F51F . . . CYP4B1 1580 broad.mit.edu 36 1 47056406 47056406 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099772 exon11 c.G1289A p.R430H . . . STIL 6491 broad.mit.edu 36 1 47540496 47540496 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001048166 exon4 c.G262A p.E88K . . . CMPK1 51727 broad.mit.edu 36 1 47613230 47613230 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136140 exon3 c.G387A p.E129E . . . SPATA6 54558 broad.mit.edu 36 1 48598000 48598000 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019073 exon10 c.C939T p.F313F . . . SPATA6 54558 broad.mit.edu 36 1 48691328 48691328 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019073 exon2 c.T114C p.F38F . . . AGBL4 84871 broad.mit.edu 36 1 48829174 48829174 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032785 exon10 c.A1022G p.N341S . . . TTC39A 22996 broad.mit.edu 36 1 51526496 51526496 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144832 exon18 c.G1667A p.R556Q . . . NRD1 4898 broad.mit.edu 36 1 52036565 52036565 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002525 exon24 c.G2752T p.E918X . . . ZCCHC11 23318 broad.mit.edu 36 1 52663721 52663721 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009881 exon29 c.A4758G p.A1586A . . . ZCCHC11 23318 broad.mit.edu 36 1 52727183 52727183 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009881 exon9 c.C1501T p.R501C . . . PODN 127435 broad.mit.edu 36 1 53319059 53319059 + Nonsense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001199080 exon11 c.C1671G p.Y557X . . . DMRTB1 63948 broad.mit.edu 36 1 53702975 53702975 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_033067 exon3 c.G828A p.P276P . . . LRRC42 115353 broad.mit.edu 36 1 54196448 54196448 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_052940 exon3 c.C512A p.S171Y . . . CYB5RL 606495 broad.mit.edu 36 1 54412972 54412972 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031672 exon8 c.G856A p.A286T . . . USP24 23358 broad.mit.edu 36 1 55362751 55362751 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015306 exon35 c.C4099T p.R1367X . . . USP24 23358 broad.mit.edu 36 1 55395290 55395290 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015306 exon12 c.C1365A p.Y455X . . . PPAP2B 8613 broad.mit.edu 36 1 56734933 56734933 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003713 exon6 c.T814C p.F272L . . . PRKAA2 5563 broad.mit.edu 36 1 56912683 56912683 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006252 exon2 c.A136C p.I46L . . . PRKAA2 5563 broad.mit.edu 36 1 56942663 56942663 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006252 exon7 c.G1220A p.R407Q . . . C1orf168 199920 broad.mit.edu 36 1 56958529 56958529 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004303 exon18 c.G2036T p.G679V . . . C1orf168 199920 broad.mit.edu 36 1 56961889 56961889 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004303 exon17 c.G1934A p.R645K . . . NFIA 4774 broad.mit.edu 36 1 61642484 61642484 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145512 exon9 c.T1331G p.F444C . . . TM2D1 83941 broad.mit.edu 36 1 61947626 61947626 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032027 exon3 c.G310A p.E104K . . . L1TD1 54596 broad.mit.edu 36 1 62445393 62445393 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019079 exon3 c.G505A p.E169K . . . DOCK7 85440 broad.mit.edu 36 1 62727250 62727250 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033407 exon41 c.G5343T p.K1781N . . . DOCK7 85440 broad.mit.edu 36 1 62733881 62733881 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033407 exon38 c.A4890G p.E1630E . . . DOCK7 85440 broad.mit.edu 36 1 62873079 62873079 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033407 exon9 c.A988C p.I330L . . . ATG4C 84938 broad.mit.edu 36 1 63057377 63057377 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178221 exon5 c.G508T p.E170X . . . ATG4C 84938 broad.mit.edu 36 1 63057535 63057535 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178221 exon5 c.G666T p.K222N . . . EFCAB7 84455 broad.mit.edu 36 1 63764013 63764013 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032437 exon2 c.A182G p.Y61C . . . CACHD1 57685 broad.mit.edu 36 1 64880166 64880166 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020925 exon8 c.C929A p.T310N . . . CACHD1 57685 broad.mit.edu 36 1 64892136 64892136 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020925 exon11 c.C1495T p.R499W . . . JAK1 3716 broad.mit.edu 36 1 65082392 65082392 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002227 exon17 c.G2346A p.T782T . . . TAS1R1 80835 broad.mit.edu 36 1 6561397 6561397 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177540 exon5 c.G930A p.E310E . . . LEPR 3953 broad.mit.edu 36 1 65858243 65858243 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003679 exon17 c.A2440C p.I814L . . . SGIP1 84251 broad.mit.edu 36 1 66967562 66967562 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032291 exon20 c.G1770T p.M590I . . . TCTEX1D1 200132 broad.mit.edu 36 1 67014565 67014565 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152665 exon4 c.T227G p.F76C . . . RPE65 6121 broad.mit.edu 36 1 68677477 68677477 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000329 exon8 c.C843A p.S281S . . . LRRC7 57554 broad.mit.edu 36 1 70277407 70277407 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020794 exon19 c.C3198T p.I1066I . . . LRRC7 57554 broad.mit.edu 36 1 70314396 70314396 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020794 exon22 c.C4165T p.R1389C . . . LRRC40 55631 broad.mit.edu 36 1 70394009 70394009 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_017768 exon11 c.G1279A p.V427I . . . ANKRD13C 81573 broad.mit.edu 36 1 70553780 70553780 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030816 exon4 c.G635A p.R212Q . . . ZRANB2 9406 broad.mit.edu 36 1 71305167 71305167 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005455 exon9 c.G809A p.R270Q . . . CAMTA1 23261 broad.mit.edu 36 1 7232186 7232186 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015215 exon5 c.C351T p.Y117Y . . . TNNI3K 51086 broad.mit.edu 36 1 74581149 74581149 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199327 exon10 c.C1021A p.H341N . . . TNNI3K 51086 broad.mit.edu 36 1 74592285 74592285 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199327 exon13 c.G1364A p.R455H . . . TNNI3K 51086 broad.mit.edu 36 1 74607684 74607684 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199327 exon18 c.C1797T p.C599C . . . C1orf173 127254 broad.mit.edu 36 1 74859017 74859017 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002912 exon8 c.T989C p.L330P . . . C1orf173 127254 broad.mit.edu 36 1 74870016 74870016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002912 exon7 c.C788T p.A263V . . . CAMTA1 23261 broad.mit.edu 36 1 7623139 7623139 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015215 exon7 c.C603T p.T201T . . . ST6GALNAC3 256435 broad.mit.edu 36 1 76552235 76552235 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152996 exon2 c.G176A p.R59Q . . . ST6GALNAC3 256435 broad.mit.edu 36 1 76650443 76650443 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152996 exon3 c.C376T p.R126X . . . PER3 8863 broad.mit.edu 36 1 7770785 7770785 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016831 exon4 c.C484A p.L162M . . . AK5 26289 broad.mit.edu 36 1 77756972 77756972 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012093 exon11 c.T1205G p.I402S . . . USP33 23032 broad.mit.edu 36 1 77966658 77966658 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015017 exon11 c.G1138A p.E380K . . . NEXN 91624 broad.mit.edu 36 1 78156270 78156270 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144573 exon4 c.T257C p.V86A . . . DNAJB4 11080 broad.mit.edu 36 1 78251455 78251455 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007034 exon2 c.G344A p.R115Q . . . PTGFR 5737 broad.mit.edu 36 1 78774898 78774898 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000959 exon3 c.A1018C p.N340H . . . ERRFI1 54206 broad.mit.edu 36 1 7995985 7995985 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018948 exon4 c.G1261A p.A421T . . . LPHN2 23266 broad.mit.edu 36 1 82223555 82223555 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012302 exon19 c.G3385T p.D1129Y . . . WDR63 126820 broad.mit.edu 36 1 85366991 85366991 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145172 exon21 c.T2330G p.F777C . . . SYDE2 84144 broad.mit.edu 36 1 85397118 85397118 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032184 exon7 c.G3488A p.R1163Q . . . ZNHIT6 54680 broad.mit.edu 36 1 85946270 85946270 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017953 exon1 c.T286A p.W96R . . . CLCA1 1179 broad.mit.edu 36 1 86725014 86725014 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001285 exon7 c.C1172T p.S391L . . . CLCA4 22802 broad.mit.edu 36 1 86805820 86805820 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012128 exon7 c.C1080T p.I360I . . . HS2ST1 9653 broad.mit.edu 36 1 87311440 87311440 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134492 exon2 c.T360C p.D120D . . . CCBL2 56267 broad.mit.edu 36 1 89187481 89187481 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008662 exon10 c.C920A p.S307Y . . . GBP1 2633 broad.mit.edu 36 1 89301447 89301447 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002053 exon2 c.G59A p.R20Q . . . GBP2 2634 broad.mit.edu 36 1 89348136 89348136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004120 exon10 c.C1471T p.R491C . . . GBP6 163351 broad.mit.edu 36 1 89622278 89622278 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198460 exon10 c.G1507A p.E503K . . . LRRC8B 23507 broad.mit.edu 36 1 89822105 89822105 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015350 exon5 c.C1308A p.V436V . . . LRRC8D 55144 broad.mit.edu 36 1 90171966 90171966 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001134479 exon3 c.A751G p.T251A . . . ZNF326 284695 broad.mit.edu 36 1 90260470 90260470 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182976 exon11 c.C1379T p.A460V . . . BRDT 676 broad.mit.edu 36 1 92219522 92219522 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207189 exon11 c.A1860C p.T620T . . . EPHX4 253152 broad.mit.edu 36 1 92290743 92290743 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173567 exon6 c.A797G p.Y266C . . . C1orf146 388649 broad.mit.edu 36 1 92482412 92482412 + Nonsense_Mutation SNP G T T rs61732740 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012425 exon4 c.G211T p.E71X . . . EVI5 7813 broad.mit.edu 36 1 92915333 92915333 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005665 exon10 c.G1260A p.T420T . . . MTF2 22823 broad.mit.edu 36 1 93367473 93367473 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007358 exon11 c.G1040A p.R347Q . . . FNBP1L 54874 broad.mit.edu 36 1 93737621 93737621 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024948 exon2 c.C33T p.F11F . . . ABCA4 24 broad.mit.edu 36 1 94243591 94243591 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000350 exon44 c.C6141T p.I2047I . . . ABCD3 5825 broad.mit.edu 36 1 94727879 94727879 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002858 exon14 c.C1168T p.R390W . . . CNN3 1266 broad.mit.edu 36 1 95140337 95140337 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001839 exon4 c.C312T p.F104F . . . RWDD3 25950 broad.mit.edu 36 1 95482668 95482668 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199682 exon2 c.G399A p.T133T . . . CLSTN1 22883 broad.mit.edu 36 1 9717805 9717805 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014944 exon13 c.C1868G p.A623G . . . DPYD 1806 broad.mit.edu 36 1 97753929 97753929 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000110 exon13 c.C1681T p.R561X . . . LPPR5 163404 broad.mit.edu 36 1 99131217 99131217 + Nonstop_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001037317 exon6 c.G965T p.X322L . . . NMNAT1 64802 broad.mit.edu 36 1 9958346 9958346 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022787 exon3 c.G225T p.K75N . . . SPATA1 64173 broad.mit.edu 36 1 84754584 84754584 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C20orf94 128710 broad.mit.edu 36 20 10386866 10386866 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001009608 exon2 c.A14C p.K5T . . . JAG1 182 broad.mit.edu 36 20 10574067 10574067 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000214 exon16 c.G2050A p.D684N JAG1,lung,NS,Substitution - Missense,0 . . BTBD3 22903 broad.mit.edu 36 20 11847074 11847074 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014962 exon1 c.G151A p.E51K . . . SPTLC3 55304 broad.mit.edu 36 20 13055243 13055243 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018327 exon9 c.C1158T p.L386L . . . ISM1 140862 broad.mit.edu 36 20 13208403 13208403 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080826 exon3 c.C501A p.S167S . . . ISM1 140862 broad.mit.edu 36 20 13227767 13227767 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080826 exon6 c.C1056T p.S352S . . . ESF1 51575 broad.mit.edu 36 20 13646019 13646019 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016649 exon13 c.T2258C p.F753S . . . SEL1L2 80343 broad.mit.edu 36 20 13847763 13847763 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025229 exon4 c.A290C p.K97T . . . SEL1L2 80343 broad.mit.edu 36 20 13860368 13860368 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025229 exon3 c.G164T p.R55I . . . SIRPB2 284759 broad.mit.edu 36 20 1408374 1408374 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122962 exon2 c.C422T p.S141L . . . SIRPD 128646 broad.mit.edu 36 20 1480361 1480361 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178460 exon2 c.C397T p.R133W . . . SIRPG 55423 broad.mit.edu 36 20 1577804 1577804 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039508 exon2 c.C324T p.S108S . . . KIF16B 55614 broad.mit.edu 36 20 16296206 16296206 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199866 exon23 c.T3764C p.V1255A . . . KIF16B 55614 broad.mit.edu 36 20 16441483 16441483 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024704 exon5 c.G434A p.R145Q . . . CSRP2BP 57325 broad.mit.edu 36 20 18090572 18090572 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020536 exon5 c.G791A p.R264Q . . . CSRP2BP 57325 broad.mit.edu 36 20 18113371 18113371 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020536 exon9 c.C2110A p.L704M . . . ZNF133 7692 broad.mit.edu 36 20 18243739 18243739 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003434 exon7 c.G241A p.D81N . . . RBBP9 10741 broad.mit.edu 36 20 18418541 18418541 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006606 exon5 c.G428C p.W143S . . . DTD1 92675 broad.mit.edu 36 20 18524815 18524815 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080820 exon3 c.G300A p.E100E . . . C20orf26 26074 broad.mit.edu 36 20 20004250 20004250 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015585 exon6 c.G557A p.R186H . . . C20orf26 26074 broad.mit.edu 36 20 20226871 20226871 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015585 exon25 c.G3263A p.R1088Q . . . RALGAPA2 57186 broad.mit.edu 36 20 20568527 20568527 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020343 exon7 c.G568T p.E190X . . . PLK1S1 55857 broad.mit.edu 36 20 21161426 21161426 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163022 exon10 c.C1528T p.R510W . . . XRN2 22803 broad.mit.edu 36 20 21267706 21267706 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012255 exon14 c.G1258T p.E420X . . . CST1 1469 broad.mit.edu 36 20 23676511 23676511 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001898 exon3 c.A368G p.Y123C . . . DEFB125 245938 broad.mit.edu 36 20 24778 24778 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153325 exon2 c.A191G p.Y64C . . . NINL 22981 broad.mit.edu 36 20 25420121 25420121 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025176 exon11 c.C1351T p.R451W . . . NOP56 10528 broad.mit.edu 36 20 2584275 2584275 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006392 exon7 c.C792T p.I264I . . . CPXM1 56265 broad.mit.edu 36 20 2722888 2722888 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001184699 exon14 c.T1931C p.V644A . . . VPS16 64601 broad.mit.edu 36 20 2793219 2793219 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080413 exon15 c.G1413A p.T471T . . . DEFB119 245932 broad.mit.edu 36 20 29428897 29428897 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153289 exon2 c.G68A p.R23H . . . DEFB121 245934 broad.mit.edu 36 20 29456491 29456491 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011878 exon2 c.A117C p.V39V . . . TPX2 22974 broad.mit.edu 36 20 29821867 29821867 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012112 exon6 c.A417C p.K139N . . . TPX2 22974 broad.mit.edu 36 20 29845471 29845471 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012112 exon14 c.G1669T p.E557X . . . TTLL9 164395 broad.mit.edu 36 20 29988921 29988921 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008409 exon13 c.C1066T p.L356F . . . C20orf160 140706 broad.mit.edu 36 20 30080495 30080495 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080625 exon7 c.C1106T p.A369V . . . BPIL3 128859 broad.mit.edu 36 20 31084473 31084473 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174897 exon2 c.G120A p.E40E . . . C20orf185 359710 broad.mit.edu 36 20 31121405 31121405 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182658 exon11 c.C1200A p.I400I . . . C20orf114 92747 broad.mit.edu 36 20 31343435 31343435 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033197 exon6 c.C577A p.P193T . . . CHMP4B 128866 broad.mit.edu 36 20 31902500 31902500 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176812 exon3 c.G450A p.S150S . . . DYNLRB1 83658 broad.mit.edu 36 20 32586227 32586227 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014183 exon3 c.C214T p.R72C . . . C20orf194 25943 broad.mit.edu 36 20 3259307 3259307 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009984 exon12 c.G1086A p.K362K . . . NCOA6 23054 broad.mit.edu 36 20 32766804 32766804 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014071 exon15 c.C6175T p.R2059X . . . NCOA6 23054 broad.mit.edu 36 20 32778816 32778816 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014071 exon14 c.G6056A p.R2019Q . . . ACSS2 55902 broad.mit.edu 36 20 32934408 32934408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018677 exon2 c.G329A p.R110Q . . . GSS 2937 broad.mit.edu 36 20 32983492 32983492 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000178 exon10 c.C940T p.P314S . . . MYL9 10398 broad.mit.edu 36 20 34606770 34606770 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006097 exon2 c.C69T p.F23F . . . NDRG3 57446 broad.mit.edu 36 20 34727116 34727116 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032013 exon11 c.G695A p.R232H . . . RBL1 5933 broad.mit.edu 36 20 35108983 35108983 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002895 exon12 c.C1492A p.H498N . . . C20orf132 140699 broad.mit.edu 36 20 35175900 35175900 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_152503 exon19 c.A2599C p.K867Q . . . C20orf132 140699 broad.mit.edu 36 20 35190870 35190870 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213632 exon12 c.G1660T p.D554Y . . . RPRD1B 58490 broad.mit.edu 36 20 36119361 36119361 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021215 exon4 c.G429T p.K143N . . . TGM2 7052 broad.mit.edu 36 20 36201441 36201441 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_198951 exon9 c.C1129T p.R377C . . . PPP1R16B 26051 broad.mit.edu 36 20 36980247 36980247 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172735 exon10 c.G1102A p.E368K . . . SPEF1 25876 broad.mit.edu 36 20 3707443 3707443 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015417 exon5 c.G429T p.Q143H . . . PTPRT 11122 broad.mit.edu 36 20 40164213 40164213 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133170 exon27 c.G3736T p.E1246X . . . SRSF6 6431 broad.mit.edu 36 20 41522779 41522779 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006275 exon6 c.C697T p.R233X . . . RIMS4 140730 broad.mit.edu 36 20 42819028 42819028 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182970 exon5 c.C516T p.V172V . . . MATN4 8785 broad.mit.edu 36 20 43363272 43363272 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003833 exon5 c.A773T p.D258V . . . SPINLW1 57119 broad.mit.edu 36 20 43604206 43604206 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_181502 exon3 c.C345T p.R115R . . . WFDC3 140686 broad.mit.edu 36 20 43836489 43836489 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080614 exon7 c.G681T p.E227D . . . ZNF335 63925 broad.mit.edu 36 20 44019903 44019903 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022095 exon16 c.C2325T p.G775G . . . NCOA5 57727 broad.mit.edu 36 20 44132527 44132527 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020967 exon3 c.C94T p.R32X . . . CDH22 64405 broad.mit.edu 36 20 44278914 44278914 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_021248 exon4 c.G796A p.V266I . . . SLC35C2 51006 broad.mit.edu 36 20 44419808 44419808 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173073 exon3 c.C132T p.F44F . . . SLC13A3 64849 broad.mit.edu 36 20 44645680 44645680 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001193339 exon8 c.T1007C p.V336A . . . TP53RK 112858 broad.mit.edu 36 20 44749107 44749107 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033550 exon2 c.C454T p.R152X . . . EYA2 2139 broad.mit.edu 36 20 45159170 45159170 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172110 exon9 c.T844G p.F282V . . . ZMYND8 23613 broad.mit.edu 36 20 45308249 45308249 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012408 exon14 c.G2194A p.E732K . . . NCOA3 8202 broad.mit.edu 36 20 45709243 45709243 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174087 exon18 c.A3272C p.K1091T . . . ARFGEF2 10564 broad.mit.edu 36 20 47055131 47055131 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006420 exon26 c.C3550A p.L1184M . . . RASSF2 9770 broad.mit.edu 36 20 4714954 4714954 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170774 exon10 c.C834T p.F278F . . . DDX27 55661 broad.mit.edu 36 20 47283274 47283274 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017895 exon10 c.G1149A p.E383E . . . B4GALT5 9334 broad.mit.edu 36 20 47689731 47689731 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004776 exon7 c.G808A p.E270K . . . ADNP 23394 broad.mit.edu 36 20 48942879 48942879 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015339 exon5 c.A1779G p.P593P . . . DPM1 8813 broad.mit.edu 36 20 48986166 48986166 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003859 exon8 c.T604G p.C202G . . . TSHZ2 128553 broad.mit.edu 36 20 51304378 51304378 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_173485 exon2 c.T974C p.F325S . . . ZNF217 7764 broad.mit.edu 36 20 51625842 51625842 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006526 exon3 c.G2868A p.P956P . . . ZNF217 7764 broad.mit.edu 36 20 51626699 51626699 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006526 exon3 c.G2011A p.A671T . . . ZNF217 7764 broad.mit.edu 36 20 51632319 51632319 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006526 exon1 c.G454A p.D152N . . . CYP24A1 1591 broad.mit.edu 36 20 52219543 52219543 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000782 exon4 c.T635G p.F212C . . . C20orf107 388799 broad.mit.edu 36 20 54533362 54533362 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012971 exon1 c.G91A p.E31K . . . C20orf107 388799 broad.mit.edu 36 20 54533461 54533461 + Missense_Mutation SNP C A A rs2019515 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012971 exon1 c.C190A p.L64I . . . C20orf107 388799 broad.mit.edu 36 20 54544672 54544672 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013646 exon2 c.G287A p.R96H . . . SPO11 23626 broad.mit.edu 36 20 55341705 55341705 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012444 exon3 c.C300A p.I100I . . . CTCFL 140690 broad.mit.edu 36 20 55523117 55523117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080618 exon7 c.G1267A p.E423K . . . PHACTR3 116154 broad.mit.edu 36 20 57751573 57751573 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080672 exon2 c.G135A p.T45T . . . SYCP2 10388 broad.mit.edu 36 20 57928809 57928809 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014258 exon4 c.G297T p.K99N . . . C20orf177 63939 broad.mit.edu 36 20 57952698 57952698 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190826 exon5 c.G305T p.R102I . . . CHGB 1114 broad.mit.edu 36 20 5851275 5851275 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001819 exon4 c.G485T p.R162I . . . MCM8 84515 broad.mit.edu 36 20 5896091 5896091 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032485 exon9 c.A885G p.E295E . . . SLCO4A1 28231 broad.mit.edu 36 20 60769878 60769878 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_016354 exon9 c.T1708G p.C570G . . . C20orf54 113278 broad.mit.edu 36 20 693858 693858 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033409 exon2 c.C561T p.I187I . . . HAO1 54363 broad.mit.edu 36 20 7812275 7812275 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017545 exon8 c.G1078A p.V360M . . . PLCB1 23236 broad.mit.edu 36 20 8300096 8300096 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182734 exon3 c.A245C p.K82T . . . PLCB4 5332 broad.mit.edu 36 20 9382067 9382067 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000933 exon29 c.C2918T p.S973L . . . PLCB4 5332 broad.mit.edu 36 20 9407604 9407604 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000933 exon36 c.G3533A p.R1178Q . . . PAK7 57144 broad.mit.edu 36 20 9509352 9509352 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177990 exon4 c.G430A p.E144K . . . LIPI 149998 broad.mit.edu 36 21 14403238 14403238 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198996 exon10 c.G1393T p.D465Y . . . USP25 29761 broad.mit.edu 36 21 16158615 16158615 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013396 exon19 c.G2495A p.R832K . . . USP25 29761 broad.mit.edu 36 21 16172643 16172643 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013396 exon24 c.G3146A p.R1049Q . . . TMPRSS15 5651 broad.mit.edu 36 21 18654018 18654018 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002772 exon8 c.C807T p.F269F . . . NCAM2 4685 broad.mit.edu 36 21 21726424 21726424 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004540 exon12 c.G1606T p.E536X . . . NCAM2 4685 broad.mit.edu 36 21 21771617 21771617 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004540 exon15 c.G2031A p.P677P . . . MRPL39 54148 broad.mit.edu 36 21 25900781 25900781 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017446 exon2 c.G131A p.R44Q . . . GABPA 2551 broad.mit.edu 36 21 26052356 26052356 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197297 exon6 c.C718A p.L240I . . . ADAMTS1 9510 broad.mit.edu 36 21 27134685 27134685 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006988 exon5 c.C1446T p.Y482Y . . . ADAMTS5 11096 broad.mit.edu 36 21 27237665 27237665 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007038 exon3 c.G1310A p.R437H . . . LTN1 26046 broad.mit.edu 36 21 29240109 29240109 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015565 exon21 c.T3797C p.V1266A . . . LTN1 26046 broad.mit.edu 36 21 29260595 29260595 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015565 exon10 c.G2227A p.E743K . . . USP16 10600 broad.mit.edu 36 21 29333323 29333323 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001992 exon8 c.G835T p.E279X . . . GRIK1 2897 broad.mit.edu 36 21 29871231 29871231 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175611 exon13 c.C2009T p.S670L . . . CLDN17 26285 broad.mit.edu 36 21 30460640 30460640 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012131 exon1 c.G167A p.R56Q . . . KRTAP15-1 254950 broad.mit.edu 36 21 30734753 30734753 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_181623 exon1 c.G237T p.K79N . . . KRTAP19-1 337882 broad.mit.edu 36 21 30774454 30774454 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181607 exon1 c.C54T p.F18F . . . KRTAP19-3 337970 broad.mit.edu 36 21 30786100 30786100 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181609 exon1 c.G47C p.G16A . . . KRTAP19-4 337971 broad.mit.edu 36 21 30791228 30791228 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181610 exon1 c.C72A p.G24G . . . TIAM1 7074 broad.mit.edu 36 21 31430123 31430123 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon24 c.C3882T p.F1294F . . . TIAM1 7074 broad.mit.edu 36 21 31489483 31489483 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon14 c.G2503T p.E835X . . . TIAM1 7074 broad.mit.edu 36 21 31546187 31546187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon6 c.G1153A p.E385K . . . SYNJ1 8867 broad.mit.edu 36 21 32933958 32933958 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003895 exon30 c.G3708A p.T1236T . . . GCFC1 94104 broad.mit.edu 36 21 33064017 33064017 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013329 exon2 c.G451T p.E151X . . . IL10RB 3588 broad.mit.edu 36 21 33577362 33577362 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000628 exon5 c.C592T p.R198W . . . IFNGR2 3460 broad.mit.edu 36 21 33715797 33715797 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005534 exon3 c.G347A p.R116Q . . . DNAJC28 54943 broad.mit.edu 36 21 33783262 33783262 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040192 exon2 c.C309A p.L103L . . . ITSN1 6453 broad.mit.edu 36 21 34060151 34060151 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001132 exon10 c.T891G p.P297P . . . MRPS6 64968 broad.mit.edu 36 21 34419536 34419536 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032476 exon2 c.G71A p.R24H . . . KCNE1 3753 broad.mit.edu 36 21 34743780 34743780 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127668 exon3 c.C23T p.A8V . . . CBR3 874 broad.mit.edu 36 21 36432084 36432084 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001236 exon2 c.G381A p.P127P . . . DOPEY2 9980 broad.mit.edu 36 21 36545348 36545348 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005128 exon22 c.T5017G p.L1673V . . . MORC3 23515 broad.mit.edu 36 21 36633054 36633054 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015358 exon5 c.G573T p.K191N . . . MORC3 23515 broad.mit.edu 36 21 36663988 36663988 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015358 exon15 c.G2452A p.D818N . . . TTC3 7267 broad.mit.edu 36 21 37458228 37458228 + Missense_Mutation SNP G A A rs1133018 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001894 exon32 c.G3176A p.R1059Q . . . TTC3 7267 broad.mit.edu 36 21 37460023 37460023 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001894 exon33 c.G3637A p.E1213K . . . DYRK1A 1859 broad.mit.edu 36 21 37774960 37774960 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130436 exon4 c.G451A p.E151K . . . ETS2 2114 broad.mit.edu 36 21 39108701 39108701 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005239 exon5 c.A431C p.K144T . . . BRWD1 54014 broad.mit.edu 36 21 39523226 39523226 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033656 exon26 c.G3007T p.E1003X . . . BRWD1 54014 broad.mit.edu 36 21 39592272 39592272 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007246 exon5 c.C305A p.S102Y . . . SH3BGR 6450 broad.mit.edu 36 21 39756217 39756217 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_007341 exon2 c.A281C p.K94T . . . IGSF5 150084 broad.mit.edu 36 21 40065000 40065000 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080444 exon4 c.C706T p.R236W . . . DSCAM 1826 broad.mit.edu 36 21 40986640 40986640 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001389 exon3 c.C474A p.V158V . . . PDE9A 5152 broad.mit.edu 36 21 43026597 43026597 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001574 exon5 c.G302A p.R101H . . . PKNOX1 5316 broad.mit.edu 36 21 43303274 43303274 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004571 exon4 c.T222C p.C74C . . . RRP1B 23076 broad.mit.edu 36 21 43921119 43921119 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015056 exon8 c.C692T p.T231M . . . TRPM2 7226 broad.mit.edu 36 21 44658232 44658232 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003307 exon20 c.C2993A p.P998H . . . DIP2A 23181 broad.mit.edu 36 21 46784238 46784238 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146114 exon15 c.G1750A p.A584T . . . S100B 6285 broad.mit.edu 36 21 46846625 46846625 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006272 exon2 c.C132A p.F44L . . . TPTE 7179 broad.mit.edu 36 21 9938249 9938249 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199259 exon19 c.C1214T p.S405L . . . TPTE 7179 broad.mit.edu 36 21 9956837 9956837 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199259 exon14 c.G773A p.R258Q . . . GAB4 128954 broad.mit.edu 36 22 15852793 15852793 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037814 exon2 c.A448C p.I150L . . . BCL2L13 23786 broad.mit.edu 36 22 16546077 16546077 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015367 exon3 c.A219C p.E73D . . . CLTCL1 8218 broad.mit.edu 36 22 17600769 17600769 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001835 exon9 c.C1441T p.R481W . . . HIRA 7290 broad.mit.edu 36 22 17778255 17778255 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003325 exon2 c.C84T p.F28F . . . TBX1 6899 broad.mit.edu 36 22 18132503 18132503 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_080647 exon6 c.G707T p.R236I . . . RANBP1 5902 broad.mit.edu 36 22 18494575 18494575 + Nonstop_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002882 exon6 c.A606C p.X202Y . . . CRKL 1399 broad.mit.edu 36 22 19618189 19618189 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005207 exon2 c.A434C p.K145T . . . ZNF280A 129025 broad.mit.edu 36 22 21199292 21199292 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080740 exon2 c.G663A p.Q221Q . . . PIWIL3 440822 broad.mit.edu 36 22 23450970 23450970 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008496 exon18 c.G2142A p.S714S . . . PIWIL3 440822 broad.mit.edu 36 22 23480044 23480044 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008496 exon8 c.C914T p.A305V . . . SGSM1 129049 broad.mit.edu 36 22 23645953 23645953 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098497 exon24 c.C3186A p.F1062L . . . MYO18B 84700 broad.mit.edu 36 22 24494985 24494985 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032608 exon4 c.G1102A p.D368N . . . MYO18B 84700 broad.mit.edu 36 22 24678311 24678311 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032608 exon38 c.C5892T p.I1964I . . . SEZ6L 23544 broad.mit.edu 36 22 25036726 25036726 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184776 exon7 c.C1605T p.S535S . . . TFIP11 24144 broad.mit.edu 36 22 25232803 25232803 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012143 exon5 c.G301A p.E101K . . . MN1 4330 broad.mit.edu 36 22 26476921 26476921 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002430 exon2 c.C3945T p.F1315F . . . PITPNB 23760 broad.mit.edu 36 22 26622579 26622579 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012399 exon6 c.C333T p.I111I . . . THOC5 8563 broad.mit.edu 36 22 28265452 28265452 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003678 exon6 c.G466T p.E156X . . . NIPSNAP1 8508 broad.mit.edu 36 22 28284909 28284909 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003634 exon9 c.G740A p.R247Q . . . SEC14L3 266629 broad.mit.edu 36 22 29194665 29194665 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_174975 exon5 c.C253T p.P85S . . . EIF4ENIF1 56478 broad.mit.edu 36 22 30184494 30184494 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019843 exon7 c.C930A p.F310L . . . EIF4ENIF1 56478 broad.mit.edu 36 22 30189810 30189810 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019843 exon5 c.C442T p.R148C . . . SFI1 9814 broad.mit.edu 36 22 30311079 30311079 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014775 exon13 c.G1279A p.E427K . . . DEPDC5 9681 broad.mit.edu 36 22 30545074 30545074 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014662 exon22 c.G1733T p.G578V . . . BPIL2 254240 broad.mit.edu 36 22 31141962 31141962 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174932 exon14 c.A1341G p.G447G . . . MYH9 4627 broad.mit.edu 36 22 35052586 35052586 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002473 exon5 c.G585A p.A195A . . . TRIOBP 11078 broad.mit.edu 36 22 36449549 36449549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039141 exon7 c.G1040A p.R347Q . . . TRIOBP 11078 broad.mit.edu 36 22 36485448 36485448 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_138632 exon8 c.A1264G p.T422A . . . PLA2G6 8398 broad.mit.edu 36 22 36895198 36895198 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199562 exon2 c.A182G p.N61S . . . DDX17 10521 broad.mit.edu 36 22 37220681 37220681 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098504 exon8 c.C1114T p.R372C . . . MGAT3 4248 broad.mit.edu 36 22 38213342 38213342 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098270 exon1 c.C44T p.A15V . . . MGAT3 4248 broad.mit.edu 36 22 38213952 38213952 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098270 exon1 c.C654T p.F218F . . . ADSL 158 broad.mit.edu 36 22 39075845 39075845 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000026 exon2 c.G217A p.D73N . . . SLC25A17 10478 broad.mit.edu 36 22 39503042 39503042 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006358 exon7 c.C641T p.A214V . . . EP300 2033 broad.mit.edu 36 22 39863719 39863719 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001429 exon8 c.G1739A p.R580Q . . . SREBF2 6721 broad.mit.edu 36 22 40592983 40592983 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004599 exon2 c.A291G p.L97L . . . CENPM 79019 broad.mit.edu 36 22 40671229 40671229 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024053 exon4 c.C256T p.R86C . . . SEPT3 55964 broad.mit.edu 36 22 40720275 40720275 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145733 exon9 c.C901T p.R301X . . . NAGA 4668 broad.mit.edu 36 22 40787013 40787013 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000262 exon8 c.A962C p.K321T . . . TCF20 6942 broad.mit.edu 36 22 40936499 40936499 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005650 exon1 c.G4757T p.R1586I . . . ARFGAP3 26286 broad.mit.edu 36 22 41536859 41536859 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014570 exon12 c.C1100A p.S367Y . . . EFCAB6 64800 broad.mit.edu 36 22 42303642 42303642 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198856 exon24 c.A2832G p.Q944Q . . . EFCAB6 64800 broad.mit.edu 36 22 42353882 42353882 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198856 exon18 c.C1787A p.S596Y . . . EFCAB6 64800 broad.mit.edu 36 22 42405343 42405343 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198856 exon11 c.C829T p.R277X . . . EFCAB6 64800 broad.mit.edu 36 22 42509461 42509461 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022785 exon3 c.G71T p.R24I . . . PNPLA3 80339 broad.mit.edu 36 22 42673369 42673369 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025225 exon9 c.C1220T p.S407F . . . FBLN1 2192 broad.mit.edu 36 22 44309785 44309785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006487 exon8 c.G826A p.D276N . . . PKDREJ 10343 broad.mit.edu 36 22 45031129 45031129 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006071 exon1 c.T6755G p.V2252G . . . PKDREJ 10343 broad.mit.edu 36 22 45035866 45035866 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006071 exon1 c.A2018T p.K673I . . . BRD1 23774 broad.mit.edu 36 22 48603437 48603437 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014577 exon1 c.T533C p.V178A . . . MOV10L1 54456 broad.mit.edu 36 22 48941380 48941380 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164105 exon25 c.G3401A p.R1134Q . . . MAP4K4 9448 broad.mit.edu 36 2 101849327 101849327 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145687 exon18 c.T1886G p.I629S . . . MAP4K4 9448 broad.mit.edu 36 2 101857095 101857095 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145687 exon24 c.C2674T p.R892C . . . RRM2 6241 broad.mit.edu 36 2 10186440 10186440 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001165931 exon8 c.T993G p.D331E . . . SLC9A4 389015 broad.mit.edu 36 2 102491059 102491059 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001011552 exon5 c.C1288T p.R430X . . . TGFBRAP1 9392 broad.mit.edu 36 2 105258559 105258559 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004257 exon8 c.G1555A p.D519N . . . NCK2 8440 broad.mit.edu 36 2 105864349 105864349 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004720 exon3 c.C360T p.F120F . . . SLC5A7 60482 broad.mit.edu 36 2 107984832 107984832 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021815 exon6 c.C645T p.I215I . . . SULT1C2 6819 broad.mit.edu 36 2 108283749 108283749 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001056 exon4 c.C301T p.P101S . . . SULT1C4 27233 broad.mit.edu 36 2 108364734 108364734 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006588 exon2 c.G254A p.R85Q . . . LIMS1 3987 broad.mit.edu 36 2 108659536 108659536 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193483 exon7 c.C724T p.R242C . . . RANBP2 5903 broad.mit.edu 36 2 108747034 108747034 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006267 exon20 c.C3607T p.R1203C . . . NPHP1 4867 broad.mit.edu 36 2 110284720 110284720 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001128178 exon5 c.C474T p.I158I . . . BUB1 699 broad.mit.edu 36 2 111132759 111132759 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004336 exon12 c.C1310A p.S437Y . . . ROCK2 9475 broad.mit.edu 36 2 11255196 11255196 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004850 exon26 c.G3186T p.E1062D . . . ZC3H6 376940 broad.mit.edu 36 2 112799015 112799015 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198581 exon11 c.G1856T p.G619V . . . ZC3H6 376940 broad.mit.edu 36 2 112805517 112805517 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198581 exon12 c.G2551A p.D851N . . . IL1F5 26525 broad.mit.edu 36 2 113536669 113536669 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012275 exon5 c.G412A p.E138K . . . SNTG2 54221 broad.mit.edu 36 2 1151257 1151257 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018968 exon7 c.C435T p.G145G . . . DPP10 57628 broad.mit.edu 36 2 116163746 116163746 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178036 exon7 c.C305T p.S102L . . . GREB1 9687 broad.mit.edu 36 2 11634027 11634027 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148903 exon5 c.G552T p.K184N . . . GREB1 9687 broad.mit.edu 36 2 11638372 11638372 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148903 exon7 c.G864T p.K288N . . . GREB1 9687 broad.mit.edu 36 2 11650417 11650417 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014668 exon11 c.G1410A p.S470S . . . MARCO 8685 broad.mit.edu 36 2 119416434 119416434 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006770 exon1 c.G88A p.E30K . . . C2orf76 130355 broad.mit.edu 36 2 119813925 119813925 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017927 exon3 c.C81T p.H27H . . . CLASP1 23332 broad.mit.edu 36 2 121837337 121837337 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142274 exon35 c.C3886T p.R1296X . . . CNTNAP5 129684 broad.mit.edu 36 2 124908558 124908558 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130773 exon5 c.G557T p.R186L . . . CNTNAP5 129684 broad.mit.edu 36 2 124948907 124948907 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_130773 exon7 c.G1040A p.R347Q . . . CYP27C1 339761 broad.mit.edu 36 2 127677573 127677573 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001665 exon2 c.G23A p.R8K . . . PROC 5624 broad.mit.edu 36 2 127901171 127901171 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000312 exon8 c.G699T p.K233N . . . WDR33 55339 broad.mit.edu 36 2 128195972 128195972 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018383 exon15 c.G1579T p.E527X . . . UGGT1 56886 broad.mit.edu 36 2 128661519 128661519 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020120 exon40 c.G4503A p.P1501P . . . UGGT1 56886 broad.mit.edu 36 2 128663781 128663781 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020120 exon41 c.T4663G p.L1555V . . . POTEF 728378 broad.mit.edu 36 2 130549493 130549493 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099771 exon17 c.G2022T p.K674N . . . FAM123C 205147 broad.mit.edu 36 2 131236877 131236877 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105195 exon2 c.C762T p.F254F . . . ARHGEF4 50649 broad.mit.edu 36 2 131420586 131420586 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015320 exon4 c.C335A p.S112Y . . . GPR39 2863 broad.mit.edu 36 2 133119601 133119601 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001508 exon2 c.A1314G p.K438K . . . NCKAP5 344148 broad.mit.edu 36 2 133256922 133256922 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207363 exon14 c.C3932A p.S1311Y . . . NCKAP5 344148 broad.mit.edu 36 2 133258593 133258593 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207363 exon14 c.T2261C p.V754A . . . NCKAP5 344148 broad.mit.edu 36 2 133264090 133264090 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207481 exon13 c.C1068T p.H356H . . . YSK4 80122 broad.mit.edu 36 2 135460282 135460282 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025052 exon7 c.C2630A p.S877Y . . . UBXN4 23190 broad.mit.edu 36 2 136228214 136228214 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014607 exon4 c.T230C p.V77A . . . LCT 3938 broad.mit.edu 36 2 136291930 136291930 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002299 exon6 c.C1158T p.F386F . . . LCT 3938 broad.mit.edu 36 2 136307165 136307165 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002299 exon2 c.T706G p.S236A . . . THSD7B 80731 broad.mit.edu 36 2 137705175 137705175 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001080427 exon7 c.C1722T p.S574S . . . LRP1B 53353 broad.mit.edu 36 2 140824931 140824931 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon77 c.G11797T p.D3933Y . . . LRP1B 53353 broad.mit.edu 36 2 140844854 140844854 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon71 c.G10903T p.D3635Y . . . LRP1B 53353 broad.mit.edu 36 2 140930635 140930635 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018557 exon62 c.A9822G p.K3274K . . . LRP1B 53353 broad.mit.edu 36 2 141360342 141360342 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon24 c.C3799T p.R1267C . . . LRP1B 53353 broad.mit.edu 36 2 141382069 141382069 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon22 c.G3367A p.E1123K . . . LRP1B 53353 broad.mit.edu 36 2 141468056 141468056 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon16 c.C2622T p.S874S . . . KYNU 8942 broad.mit.edu 36 2 143460049 143460049 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032998 exon10 c.G891A p.T297T . . . GTDC1 79712 broad.mit.edu 36 2 144426834 144426834 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164629 exon10 c.T1177G p.L393V . . . ZEB2 9839 broad.mit.edu 36 2 144872862 144872862 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171653 exon7 c.C2290A p.L764I . . . ZEB2 9839 broad.mit.edu 36 2 144873724 144873724 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171653 exon7 c.A1428G p.E476E . . . ORC4 5000 broad.mit.edu 36 2 148409713 148409713 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181742 exon14 c.G1147T p.E383X . . . MBD5 55777 broad.mit.edu 36 2 148963795 148963795 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018328 exon12 c.C3425T p.A1142V . . . EPC2 26122 broad.mit.edu 36 2 149245399 149245399 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015630 exon10 c.T1693G p.L565V . . . MMADHC 27249 broad.mit.edu 36 2 150144403 150144403 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015702 exon4 c.C160T p.R54X . . . RIF1 55183 broad.mit.edu 36 2 152001638 152001638 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177664 exon12 c.C1247T p.S416L . . . RIF1 55183 broad.mit.edu 36 2 152022650 152022650 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177664 exon24 c.C2782T p.R928X . . . RIF1 55183 broad.mit.edu 36 2 152030523 152030523 + Silent SNP C T T rs61748235 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177664 exon30 c.C6243T p.D2081D . . . NEB 4703 broad.mit.edu 36 2 152092244 152092244 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon147 c.C21837T p.S7279S . . . NEB 4703 broad.mit.edu 36 2 152242459 152242459 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon34 c.G3640A p.E1214K . . . NEB 4703 broad.mit.edu 36 2 152252389 152252389 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon26 c.C2520T p.S840S . . . DDX1 1653 broad.mit.edu 36 2 15660202 15660202 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004939 exon7 c.G387A p.M129I . . . ERMN 57471 broad.mit.edu 36 2 157886536 157886536 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020711 exon3 c.G348T p.E116D . . . PKP4 8502 broad.mit.edu 36 2 159190124 159190124 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003628 exon7 c.C1092T p.F364F . . . MARCH7 64844 broad.mit.edu 36 2 160310668 160310668 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022826 exon4 c.G488A p.R163Q . . . LY75 4065 broad.mit.edu 36 2 160446972 160446972 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198760 exon7 c.A1155G p.A385A . . . FAP 2191 broad.mit.edu 36 2 162767631 162767631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004460 exon14 c.C1220T p.S407L . . . IFIH1 64135 broad.mit.edu 36 2 162838670 162838670 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022168 exon12 c.C2335T p.R779C . . . IFIH1 64135 broad.mit.edu 36 2 162842386 162842386 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022168 exon10 c.C1829T p.A610V . . . KCNH7 90134 broad.mit.edu 36 2 163401499 163401499 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173162 exon2 c.C101T p.A34V . . . FIGN 55137 broad.mit.edu 36 2 164175161 164175161 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018086 exon3 c.T1427G p.I476S . . . COBLL1 22837 broad.mit.edu 36 2 165260066 165260066 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014900 exon12 c.A2196C p.K732N . . . SCN3A 6328 broad.mit.edu 36 2 165662193 165662193 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006922 exon23 c.A4054G p.M1352V . . . SCN2A 6326 broad.mit.edu 36 2 165873965 165873965 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon5 c.G650A p.R217Q . . . FAM49A 81553 broad.mit.edu 36 2 16606766 16606766 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030797 exon6 c.C423T p.F141F . . . SCN1A 6323 broad.mit.edu 36 2 166557144 166557144 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165964 exon26 c.C4803T p.F1601F . . . SCN1A 6323 broad.mit.edu 36 2 166574560 166574560 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001165964 exon20 c.A3833G p.Y1278C . . . SCN1A 6323 broad.mit.edu 36 2 166607137 166607137 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165964 exon12 c.C2003A p.S668Y . . . SCN1A 6323 broad.mit.edu 36 2 166612424 166612424 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165964 exon8 c.C1129T p.R377X . . . SCN1A 6323 broad.mit.edu 36 2 166616493 166616493 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165964 exon6 c.T946G p.S316A . . . SCN9A 6335 broad.mit.edu 36 2 166764060 166764060 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002977 exon27 c.T5302G p.F1768V . . . SCN9A 6335 broad.mit.edu 36 2 166764273 166764273 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002977 exon27 c.C5089A p.L1697I . . . SCN9A 6335 broad.mit.edu 36 2 166793590 166793590 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002977 exon22 c.G4030A p.D1344N . . . SCN7A 6332 broad.mit.edu 36 2 166992583 166992583 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002976 exon17 c.T2814G p.C938W . . . PXDN 7837 broad.mit.edu 36 2 1670426 1670426 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012293 exon4 c.C401T p.A134V . . . XIRP2 129446 broad.mit.edu 36 2 167782945 167782945 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199143 exon6 c.C846T p.C282C . . . XIRP2 129446 broad.mit.edu 36 2 167810570 167810570 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C3756A p.I1252I . . . XIRP2 129446 broad.mit.edu 36 2 167810645 167810645 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C3831T p.F1277F . . . XIRP2 129446 broad.mit.edu 36 2 167812261 167812261 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C5447T p.A1816V . . . XIRP2 129446 broad.mit.edu 36 2 167813603 167813603 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.T6789G p.S2263R . . . XIRP2 129446 broad.mit.edu 36 2 167814723 167814723 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.G7909A p.D2637N . . . STK39 27347 broad.mit.edu 36 2 168529444 168529444 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013233 exon17 c.G1537A p.A513T . . . ABCB11 8647 broad.mit.edu 36 2 169489462 169489462 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003742 exon27 c.T3716C p.I1239T . . . LRP2 4036 broad.mit.edu 36 2 169837755 169837755 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon15 c.A2044C p.N682H . . . LRP2 4036 broad.mit.edu 36 2 169855729 169855729 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon8 c.A794C p.K265T . . . PPIG 9360 broad.mit.edu 36 2 170201291 170201291 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004792 exon14 c.T1277G p.V426G . . . KLHL23 151230 broad.mit.edu 36 2 170300515 170300515 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199290 exon4 c.G745A p.E249K . . . UBR3 130507 broad.mit.edu 36 2 170523251 170523251 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172070 exon24 c.G3603T p.Q1201H . . . MYO3B 140469 broad.mit.edu 36 2 170966248 170966248 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171642 exon18 c.C1930A p.L644M . . . MYO3B 140469 broad.mit.edu 36 2 171064424 171064424 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001171642 exon27 c.T3149C p.V1050A . . . METTL8 79828 broad.mit.edu 36 2 171904260 171904260 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024770 exon4 c.C286A p.H96N . . . SLC25A12 8604 broad.mit.edu 36 2 172401889 172401889 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_003705 exon6 c.G600T p.E200D . . . RAPGEF4 11069 broad.mit.edu 36 2 173368051 173368051 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007023 exon2 c.G118T p.E40X . . . RAPGEF4 11069 broad.mit.edu 36 2 173556527 173556527 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007023 exon11 c.T1062G p.I354M . . . RAPGEF4 11069 broad.mit.edu 36 2 173591632 173591632 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007023 exon22 c.C2011T p.L671L . . . CIR1 9541 broad.mit.edu 36 2 174968528 174968528 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004882 exon1 c.A69C p.K23N . . . CHN1 1123 broad.mit.edu 36 2 175373249 175373249 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001822 exon13 c.C1221T p.H407H . . . CHN1 1123 broad.mit.edu 36 2 175488114 175488114 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001822 exon5 c.G178A p.D60N . . . RAD51AP2 729475 broad.mit.edu 36 2 17560855 17560855 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099218 exon1 c.G2309A p.G770E . . . RAD51AP2 729475 broad.mit.edu 36 2 17561589 17561589 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099218 exon1 c.A1575C p.K525N . . . RAD51AP2 729475 broad.mit.edu 36 2 17562652 17562652 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099218 exon1 c.G512T p.R171I . . . MTX2 10651 broad.mit.edu 36 2 176899801 176899801 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006554 exon5 c.A211G p.K71E . . . NFE2L2 4780 broad.mit.edu 36 2 177803964 177803964 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006164 exon5 c.A1613C p.K538T . . . TTC30B 150737 broad.mit.edu 36 2 178124924 178124924 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152517 exon1 c.G814T p.E272X . . . TTC30B 150737 broad.mit.edu 36 2 178125300 178125300 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152517 exon1 c.G438T p.E146D . . . PDE11A 50940 broad.mit.edu 36 2 178236862 178236862 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077196 exon16 c.G1292A p.S431N . . . PDE11A 50940 broad.mit.edu 36 2 178471040 178471040 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077197 exon5 c.C543T p.I181I . . . TTN 7273 broad.mit.edu 36 2 179104281 179104281 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon186 c.G78111T p.Q26037H . . . TTN 7273 broad.mit.edu 36 2 179107926 179107926 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon186 c.T74466G p.N24822K . . . TTN 7273 broad.mit.edu 36 2 179130072 179130072 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon158 c.T60859C p.S20287P . . . TTN 7273 broad.mit.edu 36 2 179134507 179134507 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C57402T p.F19134F . . . TTN 7273 broad.mit.edu 36 2 179136079 179136079 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.G55830T p.X18610Y . . . TTN 7273 broad.mit.edu 36 2 179145417 179145417 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.G46492T p.E15498X . . . TTN 7273 broad.mit.edu 36 2 179145913 179145913 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C45996T p.S15332S . . . TTN 7273 broad.mit.edu 36 2 179148587 179148587 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C43322A p.S14441Y . . . TTN 7273 broad.mit.edu 36 2 179148909 179148909 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.T43000G p.F14334V . . . TTN 7273 broad.mit.edu 36 2 179152592 179152592 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon147 c.G40382T p.R13461I . . . TTN 7273 broad.mit.edu 36 2 179166980 179166980 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon125 c.G31190T p.R10397I . . . TTN 7273 broad.mit.edu 36 2 179181303 179181303 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon103 c.C25357T p.R8453C . . . TTN 7273 broad.mit.edu 36 2 179184802 179184802 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon96 c.C23284T p.R7762W . . . TTN 7273 broad.mit.edu 36 2 179193514 179193514 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon76 c.C18784T p.R6262C . . . TTN 7273 broad.mit.edu 36 2 179203836 179203836 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon66 c.C16899A p.I5633I . . . TTN 7273 broad.mit.edu 36 2 179207453 179207453 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon58 c.C15105A p.I5035I . . . TTN 7273 broad.mit.edu 36 2 179207596 179207596 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon58 c.G14962A p.E4988K . . . TTN 7273 broad.mit.edu 36 2 179277501 179277501 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon102 c.C26211T p.S8737S . . . TTN 7273 broad.mit.edu 36 2 179279702 179279702 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon99 c.C25412T p.A8471V . . . TTN 7273 broad.mit.edu 36 2 179283846 179283846 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon95 c.C24491T p.A8164V . . . TTN 7273 broad.mit.edu 36 2 179287270 179287270 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon88 c.G22744A p.V7582I . . . TTN 7273 broad.mit.edu 36 2 179287418 179287418 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon88 c.C22596T p.I7532I . . . TTN 7273 broad.mit.edu 36 2 179296143 179296143 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon72 c.T18104C p.V6035A . . . TTN 7273 broad.mit.edu 36 2 179303597 179303597 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon58 c.C14176T p.H4726Y . . . TTN 7273 broad.mit.edu 36 2 179306489 179306489 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon51 c.A12044C p.E4015A . . . TTN 7273 broad.mit.edu 36 2 179307856 179307856 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon48 c.A11308G p.T3770A . . . TTN 7273 broad.mit.edu 36 2 179313811 179313811 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon45 c.C11305A p.L3769I . . . TTN 7273 broad.mit.edu 36 2 179314242 179314242 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon45 c.A10874G p.H3625R . . . TTN 7273 broad.mit.edu 36 2 179319326 179319326 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133379 exon46 c.T16046C p.V5349A . . . TTN 7273 broad.mit.edu 36 2 179319719 179319719 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon46 c.G15653A p.R5218Q . . . TTN 7273 broad.mit.edu 36 2 179320713 179320713 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133379 exon46 c.A14659G p.I4887V . . . TTN 7273 broad.mit.edu 36 2 179330706 179330706 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133432 exon44 c.A10348G p.I3450V . . . TTN 7273 broad.mit.edu 36 2 179339478 179339478 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon41 c.G9578A p.R3193Q . . . TTN 7273 broad.mit.edu 36 2 179348592 179348592 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon28 c.G6244A p.E2082K . . . TTN 7273 broad.mit.edu 36 2 179348983 179348983 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon28 c.A5853G p.V1951V . . . TTN 7273 broad.mit.edu 36 2 179354159 179354159 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon21 c.G3457T p.E1153X . . . TTN 7273 broad.mit.edu 36 2 179372840 179372840 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133379 exon5 c.C626T p.S209L . . . TTN 7273 broad.mit.edu 36 2 179377597 179377597 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon2 c.G18A p.P6P . . . CCDC141 285025 broad.mit.edu 36 2 179410395 179410395 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173648 exon23 c.C3796A p.L1266I . . . CWC22 57703 broad.mit.edu 36 2 180559695 180559695 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020943 exon4 c.C178T p.R60C . . . CERKL 375298 broad.mit.edu 36 2 182117733 182117733 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201548 exon11 c.G1304A p.R435Q . . . PDE1A 5136 broad.mit.edu 36 2 182759552 182759552 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005019 exon12 c.G1264A p.D422N . . . DNAJC10 54431 broad.mit.edu 36 2 183301853 183301853 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018981 exon7 c.G520T p.E174X . . . DNAJC10 54431 broad.mit.edu 36 2 183313344 183313344 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018981 exon12 c.C1061T p.S354L . . . DNAJC10 54431 broad.mit.edu 36 2 183329322 183329322 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018981 exon18 c.A1690G p.T564A . . . NCKAP1 10787 broad.mit.edu 36 2 183575166 183575166 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013436 exon5 c.G446A p.R149Q . . . DUSP19 142679 broad.mit.edu 36 2 183668569 183668569 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080876 exon4 c.C592T p.R198C . . . ZNF804A 91752 broad.mit.edu 36 2 185506608 185506608 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194250 exon3 c.C289T p.R97X . . . ZNF804A 91752 broad.mit.edu 36 2 185509278 185509278 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194250 exon4 c.G910T p.D304Y . . . ZNF804A 91752 broad.mit.edu 36 2 185510722 185510722 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194250 exon4 c.T2354C p.L785S . . . FSIP2 401024 broad.mit.edu 36 2 186380156 186380156 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173651 exon17 c.C18145T p.R6049C . . . FSIP2 401024 broad.mit.edu 36 2 186381140 186381140 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173651 exon17 c.T19129G p.L6377V . . . FAM171B 165215 broad.mit.edu 36 2 187313317 187313317 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177454 exon2 c.G356T p.S119I . . . FAM171B 165215 broad.mit.edu 36 2 187324244 187324244 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177454 exon5 c.G863A p.R288H . . . ZSWIM2 151112 broad.mit.edu 36 2 187406975 187406975 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182521 exon6 c.A771G p.L257L . . . WDR75 84128 broad.mit.edu 36 2 190038083 190038083 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032168 exon12 c.T1147G p.Y383D . . . PMS1 5378 broad.mit.edu 36 2 190427245 190427245 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000534 exon9 c.G1002A p.T334T . . . SLC39A10 57181 broad.mit.edu 36 2 196253541 196253541 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127257 exon2 c.G530A p.R177H . . . SLC39A10 57181 broad.mit.edu 36 2 196301240 196301240 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127257 exon9 c.T2259C p.G753G . . . DNAH7 56171 broad.mit.edu 36 2 196468063 196468063 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018897 exon30 c.T4778G p.L1593R . . . HECW2 57520 broad.mit.edu 36 2 196774272 196774272 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon29 c.G4693T p.E1565X . . . HECW2 57520 broad.mit.edu 36 2 196815124 196815124 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon20 c.C3579T p.F1193F . . . HECW2 57520 broad.mit.edu 36 2 196895460 196895460 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020760 exon7 c.C871T p.R291X . . . HECW2 57520 broad.mit.edu 36 2 197006349 197006349 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon2 c.G44A p.R15Q . . . C2orf66 401027 broad.mit.edu 36 2 197382232 197382232 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213608 exon1 c.G125T p.R42I . . . SF3B1 23451 broad.mit.edu 36 2 197971001 197971001 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012433 exon22 c.T3219G p.I1073M . . . SF3B1 23451 broad.mit.edu 36 2 197978407 197978407 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012433 exon10 c.G1274A p.R425Q . . . MOBKL3 25843 broad.mit.edu 36 2 198096611 198096611 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015387 exon2 c.G79A p.D27N . . . PLCL1 5334 broad.mit.edu 36 2 198657891 198657891 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006226 exon2 c.C1405T p.R469X . . . PLCL1 5334 broad.mit.edu 36 2 198662013 198662013 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006226 exon3 c.C2902T p.L968L . . . WDR35 57539 broad.mit.edu 36 2 19977389 19977389 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006657 exon27 c.G3285T p.E1095D . . . MATN3 4148 broad.mit.edu 36 2 20063696 20063696 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002381 exon5 c.A1155T p.K385N . . . FAM126B 285172 broad.mit.edu 36 2 201554469 201554469 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173822 exon12 c.T1362C p.S454S . . . TRAK2 66008 broad.mit.edu 36 2 201971277 201971277 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015049 exon6 c.C526T p.R176X . . . ALS2 57679 broad.mit.edu 36 2 202311692 202311692 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020919 exon12 c.C2363A p.S788Y . . . ALS2 57679 broad.mit.edu 36 2 202330472 202330472 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020919 exon5 c.G1369A p.E457K . . . BMPR2 659 broad.mit.edu 36 2 203129143 203129143 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001204 exon12 c.A2510G p.N837S . . . NBEAL1 65065 broad.mit.edu 36 2 203748209 203748209 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114132 exon41 c.C6331T p.R2111C . . . RAPH1 65059 broad.mit.edu 36 2 204062697 204062697 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203365 exon4 c.T587C p.V196A . . . CD28 940 broad.mit.edu 36 2 204299626 204299626 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006139 exon2 c.G78A p.S26S . . . CD28 940 broad.mit.edu 36 2 204307862 204307862 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006139 exon4 c.C645T p.F215F . . . PARD3B 117583 broad.mit.edu 36 2 205874656 205874656 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057177 exon17 c.C2409T p.F803F . . . NDUFS1 4719 broad.mit.edu 36 2 206699735 206699735 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005006 exon17 c.C1963T p.R655X . . . NDUFS1 4719 broad.mit.edu 36 2 206715756 206715756 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005006 exon11 c.C1032T p.G344G . . . ZDBF2 57683 broad.mit.edu 36 2 206880569 206880569 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.G3072A p.K1024K . . . ZDBF2 57683 broad.mit.edu 36 2 206881383 206881383 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020923 exon5 c.G3886A p.V1296I . . . ZDBF2 57683 broad.mit.edu 36 2 206881842 206881842 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.G4345A p.V1449I . . . ZDBF2 57683 broad.mit.edu 36 2 206882464 206882464 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.A4967C p.K1656T . . . DYTN 391475 broad.mit.edu 36 2 207236234 207236234 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093730 exon11 c.C1271T p.A424V . . . CREB1 1385 broad.mit.edu 36 2 208169977 208169977 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134442 exon9 c.A976G p.I326V . . . FAM119A 151194 broad.mit.edu 36 2 208186151 208186151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127395 exon4 c.G521A p.R174Q . . . CRYGB 1419 broad.mit.edu 36 2 208715671 208715671 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005210 exon3 c.T464C p.F155S . . . PIKFYVE 200576 broad.mit.edu 36 2 208918094 208918094 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015040 exon33 c.G5042A p.R1681Q . . . MAP2 4133 broad.mit.edu 36 2 210268884 210268884 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002374 exon7 c.C3745T p.L1249F . . . MAP2 4133 broad.mit.edu 36 2 210269594 210269594 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002374 exon8 c.C4264T p.L1422F . . . MAP2 4133 broad.mit.edu 36 2 210278690 210278690 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031847 exon8 c.A658G p.T220A . . . MAP2 4133 broad.mit.edu 36 2 210283082 210283082 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031847 exon9 c.C864T p.V288V . . . UNC80 285175 broad.mit.edu 36 2 210350449 210350449 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182587 exon4 c.G521A p.R174Q . . . RPE 6120 broad.mit.edu 36 2 210589064 210589064 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199229 exon3 c.C325T p.R109W . . . APOB 338 broad.mit.edu 36 2 21079100 21079100 + Silent SNP C T T rs56675344 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon29 c.G12699A p.S4233S . . . APOB 338 broad.mit.edu 36 2 21081638 21081638 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C11607T p.F3869F . . . APOB 338 broad.mit.edu 36 2 21082977 21082977 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.T10268C p.V3423A . . . APOB 338 broad.mit.edu 36 2 21083519 21083519 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C9726T p.L3242L . . . APOB 338 broad.mit.edu 36 2 21084948 21084948 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C8297A p.S2766Y . . . APOB 338 broad.mit.edu 36 2 21088316 21088316 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000384 exon26 c.G4929A p.A1643A . . . APOB 338 broad.mit.edu 36 2 21088845 21088845 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C4400T p.A1467V . . . APOB 338 broad.mit.edu 36 2 21088947 21088947 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C4298T p.S1433L . . . APOB 338 broad.mit.edu 36 2 21108799 21108799 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon10 c.G1284T p.E428D . . . ERBB4 2066 broad.mit.edu 36 2 211959986 211959986 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005235 exon27 c.C3318A p.C1106X . . . ERBB4 2066 broad.mit.edu 36 2 212203465 212203465 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005235 exon17 c.G2046T p.K682N . . . IKZF2 22807 broad.mit.edu 36 2 213580736 213580736 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016260 exon8 c.C1174T p.R392X . . . IKZF2 22807 broad.mit.edu 36 2 213581035 213581035 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016260 exon8 c.T875C p.F292S . . . SPAG16 79582 broad.mit.edu 36 2 214983280 214983280 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024532 exon16 c.C1892A p.S631Y . . . ABCA12 26154 broad.mit.edu 36 2 215598705 215598705 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173076 exon11 c.T1224G p.S408S . . . ABCA12 26154 broad.mit.edu 36 2 215637080 215637080 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173076 exon3 c.G271T p.D91Y . . . ATIC 471 broad.mit.edu 36 2 215911784 215911784 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004044 exon12 c.G1136A p.R379Q . . . FN1 2335 broad.mit.edu 36 2 215981343 215981343 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212476 exon16 c.G2351A p.R784Q . . . FN1 2335 broad.mit.edu 36 2 215997160 215997160 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212476 exon8 c.G1170A p.S390S . . . FN1 2335 broad.mit.edu 36 2 216004847 216004847 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_212476 exon4 c.T501G p.C167W . . . MREG 55686 broad.mit.edu 36 2 216517913 216517913 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018000 exon5 c.G563A p.R188Q . . . ZNF142 7701 broad.mit.edu 36 2 219216383 219216383 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105537 exon8 c.C3100A p.L1034I . . . PRKAG3 53632 broad.mit.edu 36 2 219403799 219403799 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017431 exon3 c.G143T p.R48I . . . FAM134A 79137 broad.mit.edu 36 2 219753645 219753645 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024293 exon5 c.C565T p.R189X . . . ANKZF1 55139 broad.mit.edu 36 2 219809318 219809318 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042410 exon14 c.A2088C p.Q696H . . . STK16 8576 broad.mit.edu 36 2 219821434 219821434 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008910 exon8 c.A827G p.D276G . . . SPEG 10290 broad.mit.edu 36 2 220041650 220041650 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005876 exon11 c.C3249T p.F1083F . . . FARSB 10056 broad.mit.edu 36 2 223172924 223172924 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005687 exon16 c.G1585T p.D529Y . . . SCG2 7857 broad.mit.edu 36 2 224170447 224170447 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003469 exon2 c.G1798T p.E600X . . . DOCK10 55619 broad.mit.edu 36 2 225360288 225360288 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014689 exon49 c.C5489T p.A1830V . . . DOCK10 55619 broad.mit.edu 36 2 225380886 225380886 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014689 exon32 c.C3571T p.R1191X . . . KIAA1486 57624 broad.mit.edu 36 2 226086486 226086486 + Missense_Mutation SNP G T T rs61753537 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020864 exon3 c.G377T p.G126V . . . KIAA1486 57624 broad.mit.edu 36 2 226154966 226154966 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020864 exon4 c.C589T p.R197X . . . KIAA1486 57624 broad.mit.edu 36 2 226155762 226155762 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020864 exon4 c.C1385T p.S462L . . . AGFG1 3267 broad.mit.edu 36 2 228106515 228106515 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004504 exon7 c.G821T p.S274I . . . SPHKAP 80309 broad.mit.edu 36 2 228591025 228591025 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142644 exon7 c.C2789T p.A930V . . . PID1 55022 broad.mit.edu 36 2 229598661 229598661 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100818 exon3 c.C585T p.S195S . . . DNER 92737 broad.mit.edu 36 2 230050113 230050113 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139072 exon7 c.C1248T p.C416C . . . TRIP12 9320 broad.mit.edu 36 2 230431954 230431954 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004238 exon3 c.G679T p.D227Y . . . SP140 11262 broad.mit.edu 36 2 230842507 230842507 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007237 exon13 c.A1257T p.E419D . . . SP100 6672 broad.mit.edu 36 2 231088103 231088103 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003113 exon25 c.T2144G p.F715C . . . ARMC9 80210 broad.mit.edu 36 2 231844012 231844012 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025139 exon13 c.T1193G p.F398C . . . NCL 4691 broad.mit.edu 36 2 232034837 232034837 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005381 exon3 c.G271A p.A91T . . . DIS3L2 129563 broad.mit.edu 36 2 232660593 232660593 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152383 exon6 c.C519T p.S173S . . . CHRND 1144 broad.mit.edu 36 2 233101581 233101581 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000751 exon5 c.C480T p.F160F . . . INPP5D 3635 broad.mit.edu 36 2 233742738 233742738 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005541 exon10 c.G1180A p.E394K . . . ATG16L1 55054 broad.mit.edu 36 2 233854537 233854537 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017974 exon10 c.A1051G p.T351A . . . ATG16L1 55054 broad.mit.edu 36 2 233863722 233863722 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017974 exon13 c.C1357T p.R453C . . . USP40 55230 broad.mit.edu 36 2 234085101 234085101 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018218 exon18 c.C2311T p.R771C . . . USP40 55230 broad.mit.edu 36 2 234094481 234094481 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018218 exon15 c.G2012T p.R671I . . . UGT1A7 54577 broad.mit.edu 36 2 234256083 234256083 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019077 exon1 c.G761A p.R254Q . . . UGT1A3 54659 broad.mit.edu 36 2 234302722 234302722 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019093 exon1 c.G211T p.E71X . . . TRPM8 79054 broad.mit.edu 36 2 234499930 234499930 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024080 exon2 c.T9C p.F3F . . . TRPM8 79054 broad.mit.edu 36 2 234512485 234512485 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024080 exon5 c.C453T p.G151G . . . TRPM8 79054 broad.mit.edu 36 2 234534335 234534335 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024080 exon12 c.G1539T p.K513N . . . SH3BP4 23677 broad.mit.edu 36 2 235615739 235615739 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014521 exon4 c.C1587T p.F529F . . . AGAP1 116987 broad.mit.edu 36 2 236456756 236456756 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037131 exon10 c.C1079T p.S360L . . . COL6A3 1293 broad.mit.edu 36 2 237909737 237909737 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057166 exon37 c.G6924A p.A2308A . . . COL6A3 1293 broad.mit.edu 36 2 237950420 237950420 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057166 exon4 c.G983A p.R328Q . . . COL6A3 1293 broad.mit.edu 36 2 237961561 237961561 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057167 exon3 c.G97T p.D33Y . . . LRRFIP1 9208 broad.mit.edu 36 2 238333543 238333543 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137552 exon10 c.A845C p.K282T . . . RBM44 375316 broad.mit.edu 36 2 238391319 238391319 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080504 exon3 c.G1021T p.D341Y . . . RBM44 375316 broad.mit.edu 36 2 238393678 238393678 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080504 exon5 c.C1861T p.R621C . . . RBM44 375316 broad.mit.edu 36 2 238402651 238402651 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080504 exon13 c.G2656T p.E886X . . . PER2 8864 broad.mit.edu 36 2 238835677 238835677 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022817 exon11 c.C1201T p.R401C . . . OR6B2 389090 broad.mit.edu 36 2 240617981 240617981 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005853 exon1 c.A539G p.D180G . . . OR6B3 150681 broad.mit.edu 36 2 240633478 240633478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173351 exon1 c.C685T p.P229S . . . OR6B3 150681 broad.mit.edu 36 2 240633878 240633878 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173351 exon1 c.C285T p.V95V . . . OR6B3 150681 broad.mit.edu 36 2 240633980 240633980 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173351 exon1 c.C183T p.Y61Y . . . SNED1 25992 broad.mit.edu 36 2 241641404 241641404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080437 exon16 c.C2245T p.P749S . . . PASK 23178 broad.mit.edu 36 2 241715138 241715138 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015148 exon10 c.G1865A p.R622Q . . . HDLBP 3069 broad.mit.edu 36 2 241841576 241841576 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005336 exon10 c.G1198A p.E400K . . . FARP2 9855 broad.mit.edu 36 2 241991924 241991924 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014808 exon3 c.C192T p.C64C . . . ITSN2 50618 broad.mit.edu 36 2 24297321 24297321 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_019595 exon29 c.C3615T p.V1205V . . . NCOA1 8648 broad.mit.edu 36 2 24781495 24781495 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003743 exon10 c.G986A p.R329K . . . ADCY3 109 broad.mit.edu 36 2 24897957 24897957 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004036 exon19 c.G3060A p.A1020A . . . DNAJC27 51277 broad.mit.edu 36 2 25039811 25039811 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198559 exon3 c.C207A p.I69I . . . ASXL2 55252 broad.mit.edu 36 2 25844020 25844020 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018263 exon7 c.A711C p.K237N . . . EPT1 85465 broad.mit.edu 36 2 26462837 26462837 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033505 exon9 c.G1024A p.V342I . . . C2orf39 92749 broad.mit.edu 36 2 26497670 26497670 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145038 exon3 c.A254C p.K85T . . . C2orf39 92749 broad.mit.edu 36 2 26527011 26527011 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145038 exon13 c.C1647A p.F549L . . . AGBL5 60509 broad.mit.edu 36 2 27146580 27146580 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021831 exon15 c.C2606A p.P869H . . . C2orf53 339779 broad.mit.edu 36 2 27213568 27213568 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178553 exon3 c.A1134G p.P378P . . . CAD 790 broad.mit.edu 36 2 27300332 27300332 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_004341 exon8 c.G1039A p.E347K . . . IFT172 26160 broad.mit.edu 36 2 27523946 27523946 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015662 exon42 c.G4599A p.T1533T . . . IFT172 26160 broad.mit.edu 36 2 27535196 27535196 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015662 exon26 c.C2831T p.A944V . . . IFT172 26160 broad.mit.edu 36 2 27556499 27556499 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015662 exon9 c.C807T p.I269I . . . C2orf16 84226 broad.mit.edu 36 2 27655489 27655489 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032266 exon1 c.G2546A p.R849Q . . . ZNF512 84450 broad.mit.edu 36 2 27692686 27692686 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032434 exon12 c.T1287G p.S429S . . . GPN1 11321 broad.mit.edu 36 2 27726537 27726537 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145049 exon12 c.C806T p.S269L . . . WDR43 23160 broad.mit.edu 36 2 28988999 28988999 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015131 exon4 c.T525C p.C175C . . . FAM179A 165186 broad.mit.edu 36 2 29098625 29098625 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_199280 exon11 c.G1458A p.S486S . . . C2orf71 388939 broad.mit.edu 36 2 29150547 29150547 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001029883 exon1 c.C85T p.R29W . . . CLIP4 79745 broad.mit.edu 36 2 29210176 29210176 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024692 exon5 c.G519A p.S173S . . . CLIP4 79745 broad.mit.edu 36 2 29250752 29250752 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024692 exon15 c.G1733T p.R578I . . . ALK 238 broad.mit.edu 36 2 29270138 29270138 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004304 exon29 c.C4319T p.A1440V . . . CAPN13 92291 broad.mit.edu 36 2 30829477 30829477 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144575 exon10 c.G1033A p.E345K . . . GALNT14 79623 broad.mit.edu 36 2 31032299 31032299 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024572 exon5 c.G515A p.R172H . . . XDH 7498 broad.mit.edu 36 2 31421089 31421089 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000379 exon31 c.G3369A p.M1123I . . . MEMO1 51072 broad.mit.edu 36 2 31948479 31948479 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015955 exon8 c.A704G p.Y235C . . . SLC30A6 55676 broad.mit.edu 36 2 32298810 32298810 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193513 exon15 c.C1030T p.R344X . . . BIRC6 57448 broad.mit.edu 36 2 32458726 32458726 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016252 exon3 c.C509G p.A170G . . . BIRC6 57448 broad.mit.edu 36 2 32610108 32610108 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016252 exon61 c.G12277T p.E4093X . . . BIRC6 57448 broad.mit.edu 36 2 32686129 32686129 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016252 exon72 c.G14174A p.R4725Q . . . TTC27 55622 broad.mit.edu 36 2 32889640 32889640 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193509 exon17 c.C1894T p.R632X . . . LTBP1 4052 broad.mit.edu 36 2 33371793 33371793 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000627 exon16 c.T2197G p.S733A . . . LTBP1 4052 broad.mit.edu 36 2 33475852 33475852 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000627 exon29 c.C4005T p.V1335V . . . RASGRP3 25780 broad.mit.edu 36 2 33598528 33598528 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170672 exon6 c.G179A p.R60Q . . . CRIM1 51232 broad.mit.edu 36 2 36545184 36545184 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016441 exon5 c.C873T p.C291C . . . FEZ2 9637 broad.mit.edu 36 2 36661938 36661938 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005102 exon4 c.G633T p.E211D . . . VIT 5212 broad.mit.edu 36 2 36886087 36886087 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177969 exon13 c.C1120T p.R374W . . . VIT 5212 broad.mit.edu 36 2 36886218 36886218 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177969 exon13 c.G1251A p.A417A . . . ALLC 55821 broad.mit.edu 36 2 3705387 3705387 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018436 exon5 c.G226A p.D76N . . . ALLC 55821 broad.mit.edu 36 2 3722870 3722870 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018436 exon10 c.G799A p.A267T . . . FAM82A1 151393 broad.mit.edu 36 2 38055942 38055942 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170793 exon3 c.G276T p.K92N . . . SRSF7 6432 broad.mit.edu 36 2 38828709 38828709 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031684 exon5 c.G556A p.G186R . . . MAP4K3 8491 broad.mit.edu 36 2 39370962 39370962 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003618 exon19 c.A1289C p.K430T . . . THUMPD2 80745 broad.mit.edu 36 2 39849097 39849097 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025264 exon4 c.A721G p.K241E . . . PLEKHH2 130271 broad.mit.edu 36 2 43775131 43775131 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172069 exon5 c.G394T p.E132X . . . DYNC2LI1 51626 broad.mit.edu 36 2 43875167 43875167 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193464 exon6 c.C388A p.L130I . . . C2orf34 79823 broad.mit.edu 36 2 44847092 44847092 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_024766 exon10 c.C782T p.A261V . . . PRKCE 5581 broad.mit.edu 36 2 46166966 46166966 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005400 exon11 c.C1553T p.S518L . . . ATP6V1E2 90423 broad.mit.edu 36 2 46592714 46592714 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080653 exon2 c.C641T p.A214V . . . SOCS5 9655 broad.mit.edu 36 2 46839304 46839304 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_144949 exon2 c.A131G p.N44S . . . SOCS5 9655 broad.mit.edu 36 2 46840490 46840490 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144949 exon2 c.C1317T p.F439F . . . SOCS5 9655 broad.mit.edu 36 2 46840564 46840564 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144949 exon2 c.C1391T p.S464L . . . MSH2 4436 broad.mit.edu 36 2 47551684 47551684 + Nonsense_Mutation SNP G T T rs63751411 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000251 exon11 c.G1738T p.E580X . . . MSH6 2956 broad.mit.edu 36 2 47876633 47876633 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000179 exon3 c.A554C p.K185T . . . MSH6 2956 broad.mit.edu 36 2 47881462 47881462 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000179 exon4 c.G2836T p.E946X MSH6,endometrium,NS,Substitution - Nonsense,0 . . MSH6 2956 broad.mit.edu 36 2 47884277 47884277 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000179 exon5 c.T3387C p.C1129C . . . STON1-GTF2A1L 286749 broad.mit.edu 36 2 48759985 48759985 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006872 exon9 c.G1337A p.R446Q . . . FSHR 2492 broad.mit.edu 36 2 49043694 49043694 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181446 exon9 c.C1692A p.F564L . . . NRXN1 9378 broad.mit.edu 36 2 50633259 50633259 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135659 exon10 c.C1849A p.H617N . . . NRXN1 9378 broad.mit.edu 36 2 50704110 50704110 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135659 exon7 c.C1079T p.S360L . . . TSPYL6 388951 broad.mit.edu 36 2 54335795 54335795 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003937 exon1 c.G998A p.G333D . . . SPTBN1 6711 broad.mit.edu 36 2 54712175 54712175 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003128 exon16 c.A3487C p.N1163H . . . SPTBN1 6711 broad.mit.edu 36 2 54738520 54738520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G A Unknown Valid Germline Phase_I Capture Illumina Illumina HiSeq NM_003128 exon30 c.G6076A p.A2026T . . . SPTBN1 6711 broad.mit.edu 36 2 54745131 54745131 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003128 exon33 c.G6458A p.G2153D . . . MTIF2 4528 broad.mit.edu 36 2 55317963 55317963 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001005369 exon16 c.T1976G p.F659C . . . VRK2 7444 broad.mit.edu 36 2 58240142 58240142 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130482 exon13 c.G1268A p.R423K . . . PUS10 150962 broad.mit.edu 36 2 61028758 61028758 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144709 exon16 c.C1375T p.R459C . . . USP34 9736 broad.mit.edu 36 2 61381652 61381652 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014709 exon29 c.T4066G p.L1356V . . . USP34 9736 broad.mit.edu 36 2 61399871 61399871 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014709 exon22 c.C3109T p.R1037X . . . UGP2 7360 broad.mit.edu 36 2 63966421 63966421 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001521 exon6 c.C737T p.A246V . . . MEIS1 4211 broad.mit.edu 36 2 66544826 66544826 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002398 exon7 c.T712C p.S238P . . . PLEK 5341 broad.mit.edu 36 2 68476439 68476439 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002664 exon9 c.G1040A p.R347Q . . . ARHGAP25 9938 broad.mit.edu 36 2 68856047 68856047 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166276 exon1 c.G231A p.T77T . . . GFPT1 2673 broad.mit.edu 36 2 69439099 69439099 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002056 exon6 c.G409A p.E137K . . . NFU1 27247 broad.mit.edu 36 2 69500189 69500189 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002755 exon4 c.C354A p.F118L . . . ASPRV1 151516 broad.mit.edu 36 2 70041614 70041614 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152792 exon1 c.G711A p.Q237Q . . . PCYOX1 51449 broad.mit.edu 36 2 70355714 70355714 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016297 exon4 c.A614C p.K205T . . . CLEC4F 165530 broad.mit.edu 36 2 70897581 70897581 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173535 exon4 c.C440T p.A147V . . . DYSF 8291 broad.mit.edu 36 2 71648850 71648850 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130982 exon27 c.G2780A p.G927D . . . DYSF 8291 broad.mit.edu 36 2 71750377 71750377 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130982 exon51 c.C5756T p.A1919V . . . C2orf7 84279 broad.mit.edu 36 2 73309157 73309157 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032319 exon5 c.C500A p.S167Y . . . ALMS1 7840 broad.mit.edu 36 2 73530531 73530531 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon8 c.T3366G p.I1122M . . . ALMS1 7840 broad.mit.edu 36 2 73531137 73531137 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon8 c.G3972T p.V1324V . . . SLC4A5 57835 broad.mit.edu 36 2 74305608 74305608 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021196 exon24 c.G3161A p.R1054Q . . . HTRA2 27429 broad.mit.edu 36 2 74613537 74613537 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_013247 exon8 c.C1294T p.R432X . . . C2orf65 130951 broad.mit.edu 36 2 74662412 74662412 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138804 exon5 c.C666A p.F222L . . . TACR1 6869 broad.mit.edu 36 2 75201228 75201228 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015727 exon2 c.G564A p.P188P . . . TACR1 6869 broad.mit.edu 36 2 75201258 75201258 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015727 exon2 c.C534T p.V178V . . . LRRTM4 80059 broad.mit.edu 36 2 77599922 77599922 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024993 exon3 c.G581A p.R194Q . . . GGCX 2677 broad.mit.edu 36 2 85634823 85634823 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000821 exon7 c.C843A p.F281L . . . USP39 10713 broad.mit.edu 36 2 85721688 85721688 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006590 exon10 c.A1363C p.K455Q . . . KIDINS220 57498 broad.mit.edu 36 2 8828255 8828255 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020738 exon22 c.G3007A p.E1003K . . . RPIA 22934 broad.mit.edu 36 2 88816359 88816359 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144563 exon6 c.G586A p.A196T . . . MBOAT2 129642 broad.mit.edu 36 2 8945611 8945611 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138799 exon5 c.G439A p.E147K . . . MRPS5 64969 broad.mit.edu 36 2 95137742 95137742 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031902 exon5 c.G542A p.R181Q . . . MRPS5 64969 broad.mit.edu 36 2 95139426 95139426 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031902 exon4 c.A365C p.K122T . . . ZNF2 7549 broad.mit.edu 36 2 95211065 95211065 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017396 exon4 c.G639T p.E213D . . . ADAM17 6868 broad.mit.edu 36 2 9583743 9583743 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003183 exon6 c.G701A p.R234H . . . SNRNP200 23020 broad.mit.edu 36 2 96321239 96321239 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014014 exon17 c.C2287T p.R763X . . . NCAPH 23397 broad.mit.edu 36 2 96371248 96371248 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015341 exon2 c.A161C p.D54A . . . FER1L5 90342 broad.mit.edu 36 2 96729822 96729822 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001113382 exon44 c.T5038G p.L1680V . . . VWA3B 200403 broad.mit.edu 36 2 98116726 98116726 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144992 exon7 c.G880A p.A294T . . . VWA3B 200403 broad.mit.edu 36 2 98273444 98273444 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144992 exon23 c.A3084C p.K1028N . . . LYG2 254773 broad.mit.edu 36 2 99225310 99225310 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175735 exon6 c.C588T p.F196F . . . REV1 51455 broad.mit.edu 36 2 99395686 99395686 + Missense_Mutation SNP C T T rs28382942 byFrequency TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016316 exon13 c.G2111A p.R704Q . . . REV1 51455 broad.mit.edu 36 2 99412814 99412814 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016316 exon9 c.G1467A p.E489E . . . AFF3 3899 broad.mit.edu 36 2 99989644 99989644 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025108 exon6 c.A830C p.K277T . . . CCDC108 255101 broad.mit.edu 36 2 219586977 219586977 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_194302 exon22 c.3636delC p.D1212fs . . . MIR216A 406998 broad.mit.edu 36 2 56069631 56069631 + RNA SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DCBLD2 131566 broad.mit.edu 36 3 100020746 100020746 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080927 exon8 c.G1077T p.K359N . . . COL8A1 1295 broad.mit.edu 36 3 100992227 100992227 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020351 exon3 c.T11G p.L4R . . . FILIP1L 11259 broad.mit.edu 36 3 101051863 101051863 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182909 exon5 c.A1347C p.E449D . . . FANCD2 2177 broad.mit.edu 36 3 10108904 10108904 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033084 exon38 c.C3817T p.R1273X . . . C3orf24 115795 broad.mit.edu 36 3 10121216 10121216 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164839 exon2 c.G243A p.T81T . . . TBC1D23 55773 broad.mit.edu 36 3 101485299 101485299 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199198 exon4 c.G430A p.D144N . . . TMEM45A 55076 broad.mit.edu 36 3 101770418 101770418 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018004 exon5 c.T651C p.N217N . . . GPR128 84873 broad.mit.edu 36 3 101845163 101845163 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032787 exon8 c.G942A p.T314T . . . GPR128 84873 broad.mit.edu 36 3 101896358 101896358 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032787 exon16 c.G2217A p.S739S . . . ABI3BP 25890 broad.mit.edu 36 3 101976860 101976860 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015429 exon27 c.C2210T p.S737L . . . ABI3BP 25890 broad.mit.edu 36 3 101979910 101979910 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015429 exon26 c.G2108T p.G703V . . . ABI3BP 25890 broad.mit.edu 36 3 102063860 102063860 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015429 exon12 c.C1144T p.L382L . . . IMPG2 50939 broad.mit.edu 36 3 102446238 102446238 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_016247 exon13 c.G1627T p.E543X . . . SENP7 57337 broad.mit.edu 36 3 102534342 102534342 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020654 exon18 c.T2535G p.I845M . . . TATDN2 9797 broad.mit.edu 36 3 10287640 10287640 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014760 exon4 c.G1774T p.G592X . . . FAM55C 91775 broad.mit.edu 36 3 103023371 103023371 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134456 exon8 c.C1563T p.V521V . . . NFKBIZ 64332 broad.mit.edu 36 3 103053741 103053741 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005474 exon3 c.G112A p.A38T . . . ZPLD1 131368 broad.mit.edu 36 3 103665767 103665767 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175056 exon7 c.G791A p.R264Q . . . SLC6A11 6538 broad.mit.edu 36 3 10836174 10836174 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014229 exon2 c.T281C p.V94A . . . SLC6A11 6538 broad.mit.edu 36 3 10891740 10891740 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014229 exon6 c.T851G p.F284C . . . BBX 56987 broad.mit.edu 36 3 108974375 108974375 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142568 exon11 c.T1117G p.F373V . . . IFT57 55081 broad.mit.edu 36 3 109408212 109408212 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018010 exon5 c.G607T p.E203X . . . MYH15 22989 broad.mit.edu 36 3 109609934 109609934 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014981 exon33 c.T4563G p.I1521M . . . DZIP3 9666 broad.mit.edu 36 3 109845767 109845767 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014648 exon14 c.C1208T p.S403F . . . PHLDB2 90102 broad.mit.edu 36 3 113171321 113171321 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134439 exon16 c.A3410G p.Y1137C . . . ABHD10 55347 broad.mit.edu 36 3 113188519 113188519 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018394 exon4 c.C507T p.V169V . . . CCDC80 151887 broad.mit.edu 36 3 113840519 113840519 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199511 exon2 c.C924T p.S308S . . . WDR52 55779 broad.mit.edu 36 3 114621655 114621655 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164496 exon5 c.G469A p.A157T . . . KIAA2018 205717 broad.mit.edu 36 3 114858217 114858217 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009899 exon7 c.T5002G p.Y1668D . . . KIAA2018 205717 broad.mit.edu 36 3 114858855 114858855 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009899 exon7 c.G4364T p.S1455I . . . ZNF80 7634 broad.mit.edu 36 3 115438258 115438258 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007136 exon1 c.G354A p.S118S . . . ZNF80 7634 broad.mit.edu 36 3 115438598 115438599 + Missense_Mutation DNP CG TA TA novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007136 exon1 c.13_14TA . . . . C3orf30 152405 broad.mit.edu 36 3 120348191 120348191 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152539 exon1 c.G465T p.E155D . . . C3orf30 152405 broad.mit.edu 36 3 120349083 120349083 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152539 exon1 c.A1357G p.T453A . . . GPR156 165829 broad.mit.edu 36 3 121369051 121369051 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168271 exon9 c.C1951T p.R651X . . . LRRC58 116064 broad.mit.edu 36 3 121536642 121536642 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099678 exon3 c.A664C p.N222H . . . TIMP4 7079 broad.mit.edu 36 3 12170855 12170855 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003256 exon4 c.A449G p.H150R . . . GTF2E1 2960 broad.mit.edu 36 3 121952352 121952352 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005513 exon2 c.G263A p.R88H . . . GTF2E1 2960 broad.mit.edu 36 3 121952427 121952427 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005513 exon2 c.G338T p.R113I . . . STXBP5L 9515 broad.mit.edu 36 3 122617454 122617454 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014980 exon26 c.C3247T p.L1083F . . . FBXO40 51725 broad.mit.edu 36 3 122823662 122823662 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016298 exon3 c.A696C p.T232T . . . HCLS1 3059 broad.mit.edu 36 3 122838696 122838696 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005335 exon7 c.C552T p.H184H . . . GOLGB1 2804 broad.mit.edu 36 3 122870750 122870750 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004487 exon18 c.C9305T p.A3102V . . . GOLGB1 2804 broad.mit.edu 36 3 122893760 122893760 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004487 exon14 c.G7126T p.E2376X . . . GOLGB1 2804 broad.mit.edu 36 3 122896085 122896085 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004487 exon13 c.G5960A p.R1987Q . . . PARP9 83666 broad.mit.edu 36 3 123742227 123742227 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146103 exon8 c.T1547G p.I516S . . . PARP14 54625 broad.mit.edu 36 3 123920243 123920243 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017554 exon14 c.C4555T p.R1519X . . . HSPBAP1 79663 broad.mit.edu 36 3 123970246 123970246 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024610 exon3 c.C424A p.L142I . . . PDIA5 10954 broad.mit.edu 36 3 124317824 124317824 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006810 exon8 c.C598T p.R200X . . . CCDC14 64770 broad.mit.edu 36 3 125132643 125132643 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022757 exon11 c.A1795G p.T599A . . . KALRN 8997 broad.mit.edu 36 3 125586504 125586504 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003947 exon11 c.C1887T p.F629F . . . KALRN 8997 broad.mit.edu 36 3 125658157 125658157 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003947 exon23 c.A3740G p.D1247G . . . KALRN 8997 broad.mit.edu 36 3 125920740 125920740 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024660 exon60 c.C8694T p.S2898S . . . MUC13 56667 broad.mit.edu 36 3 126115210 126115210 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033049 exon7 c.C970T p.R324W . . . HEG1 57493 broad.mit.edu 36 3 126215276 126215276 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020733 exon6 c.T1837G p.S613A . . . RAF1 5894 broad.mit.edu 36 3 12625290 12625290 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002880 exon5 c.G556A p.D186N . . . OSBPL11 114885 broad.mit.edu 36 3 126769086 126769086 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022776 exon6 c.G710A p.R237Q . . . TXNRD3IT1 645840 broad.mit.edu 36 3 127774041 127774041 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001039783 exon3 c.G36A p.P12P . . . CAND2 23066 broad.mit.edu 36 3 12832408 12832408 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001162499 exon9 c.C1342T p.R448W . . . MCM2 4171 broad.mit.edu 36 3 128808251 128808251 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004526 exon6 c.C1002T p.F334F . . . RUVBL1 8607 broad.mit.edu 36 3 129282863 129282863 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003707 exon11 c.G1291A p.E431K . . . EEFSEC 60678 broad.mit.edu 36 3 129448547 129448547 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021937 exon2 c.G495T p.K165N . . . DNAJB8 165721 broad.mit.edu 36 3 129664517 129664517 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_153330 exon3 c.G262A p.D88N . . . RAB43 339122 broad.mit.edu 36 3 130347389 130347389 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001199469 exon6 c.C205T p.R69X . . . COPG 22820 broad.mit.edu 36 3 130457635 130457635 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_016128 exon8 c.G527A p.R176H . . . COL6A5 256076 broad.mit.edu 36 3 131657044 131657044 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153264 exon37 c.G6634T p.E2212X . . . COL6A6 131873 broad.mit.edu 36 3 131764646 131764646 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102608 exon2 c.C109T p.R37C . . . COL6A6 131873 broad.mit.edu 36 3 131769913 131769913 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102608 exon5 c.C2176A p.L726I . . . PIK3R4 30849 broad.mit.edu 36 3 131892168 131892168 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014602 exon14 c.G3119A p.R1040Q . . . ATP2C1 27032 broad.mit.edu 36 3 132180884 132180884 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199183 exon18 c.A1624G p.T542A . . . CPNE4 131034 broad.mit.edu 36 3 132783116 132783116 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130808 exon9 c.C864G p.C288W . . . ACAD11 84129 broad.mit.edu 36 3 133821065 133821065 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032169 exon10 c.C1212A p.F404L . . . CNTN6 27255 broad.mit.edu 36 3 1342502 1342502 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014461 exon9 c.C950A p.P317H . . . TOPBP1 11073 broad.mit.edu 36 3 134844880 134844880 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007027 exon12 c.G1875C p.L625F . . . TF 7018 broad.mit.edu 36 3 134950029 134950029 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001063 exon2 c.G127A p.D43N . . . TF 7018 broad.mit.edu 36 3 134956098 134956098 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001063 exon4 c.G395A p.R132Q . . . RAB6B 51560 broad.mit.edu 36 3 135041117 135041117 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016577 exon5 c.C324T p.I108I . . . SLCO2A1 6578 broad.mit.edu 36 3 135148868 135148868 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005630 exon9 c.C1217T p.T406I . . . CEP63 80254 broad.mit.edu 36 3 135751736 135751736 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042383 exon10 c.G1186A p.E396K . . . STAG1 10274 broad.mit.edu 36 3 137701805 137701805 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005862 exon9 c.C852T p.I284I . . . STAG1 10274 broad.mit.edu 36 3 137722898 137722898 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005862 exon7 c.C523T p.R175C . . . TMEM22 80723 broad.mit.edu 36 3 138056556 138056556 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001097599 exon2 c.A564C p.I188I . . . ESYT3 83850 broad.mit.edu 36 3 139666025 139666025 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_031913 exon9 c.C1064A p.P355H . . . ESYT3 83850 broad.mit.edu 36 3 139671639 139671639 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031913 exon16 c.C1551A p.F517L . . . COPB2 9276 broad.mit.edu 36 3 140580627 140580627 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004766 exon4 c.C307T p.R103C . . . XPC 7508 broad.mit.edu 36 3 14181407 14181407 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145769 exon7 c.A699C p.E233D . . . XRN1 54464 broad.mit.edu 36 3 143622593 143622593 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019001 exon10 c.C1128T p.V376V . . . SR140 23350 broad.mit.edu 36 3 144224129 144224129 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080415 exon11 c.G953T p.R318I . . . SLC9A9 285195 broad.mit.edu 36 3 144998392 144998392 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173653 exon3 c.C422T p.P141L . . . PLOD2 5352 broad.mit.edu 36 3 147279609 147279609 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000935 exon13 c.G1484A p.R495Q . . . FGD5 152273 broad.mit.edu 36 3 14837331 14837331 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152536 exon1 c.C1749A p.L583L . . . ZIC1 7545 broad.mit.edu 36 3 148611295 148611295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_003412 exon1 c.G706A p.A236T . . . AGTR1 185 broad.mit.edu 36 3 149941861 149941861 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032049 exon3 c.T349C p.F117L . . . CPA3 1359 broad.mit.edu 36 3 150079175 150079175 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001870 exon5 c.C424T p.R142C . . . HLTF 6596 broad.mit.edu 36 3 150239666 150239666 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139048 exon23 c.G2656A p.A886T . . . HLTF 6596 broad.mit.edu 36 3 150249408 150249408 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139048 exon16 c.G1688A p.R563Q . . . HPS3 84343 broad.mit.edu 36 3 150340661 150340661 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032383 exon2 c.C398T p.S133L . . . COMMD2 51122 broad.mit.edu 36 3 150942012 150942012 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016094 exon5 c.C586T p.R196C . . . RNF13 11342 broad.mit.edu 36 3 151161467 151161467 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183381 exon10 c.C1032T p.D344D . . . TSC22D2 9819 broad.mit.edu 36 3 151658974 151658974 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014779 exon4 c.C2204A p.S735Y . . . SIAH2 6478 broad.mit.edu 36 3 151942982 151942982 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005067 exon2 c.T611C p.V204A . . . CLRN1 7401 broad.mit.edu 36 3 152128452 152128452 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174878 exon3 c.C660T p.D220D . . . CLRN1 7401 broad.mit.edu 36 3 152128524 152128524 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174878 exon3 c.T588G p.F196L . . . CAPN7 23473 broad.mit.edu 36 3 15235004 15235004 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014296 exon4 c.A390C p.K130N . . . GPR171 29909 broad.mit.edu 36 3 152399850 152399850 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013308 exon3 c.C14T p.S5L . . . MED12L 116931 broad.mit.edu 36 3 152585550 152585550 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053002 exon34 c.C4864T p.R1622X . . . CAPN7 23473 broad.mit.edu 36 3 15262062 15262062 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014296 exon17 c.A1890G p.G630G . . . IGSF10 285313 broad.mit.edu 36 3 152646312 152646312 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178822 exon4 c.G4147A p.E1383K . . . IGSF10 285313 broad.mit.edu 36 3 152647397 152647397 + Missense_Mutation SNP C T T rs35114212 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178822 exon4 c.G3062A p.R1021Q . . . IGSF10 285313 broad.mit.edu 36 3 152649265 152649265 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178822 exon4 c.G1194A p.P398P . . . AADAC 13 broad.mit.edu 36 3 153028097 153028097 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001086 exon5 c.C647T p.S216F . . . MBNL1 4154 broad.mit.edu 36 3 153645894 153645894 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207293 exon4 c.G683A p.R228K . . . ARHGEF26 26084 broad.mit.edu 36 3 155440865 155440865 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015595 exon12 c.G2107A p.V703I . . . HACL1 26061 broad.mit.edu 36 3 15585014 15585014 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012260 exon13 c.C1179T p.F393F . . . PLCH1 23007 broad.mit.edu 36 3 156681893 156681893 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130960 exon23 c.G4640A p.R1547Q . . . SLC33A1 9197 broad.mit.edu 36 3 157028813 157028813 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004733 exon6 c.T1530C p.Y510Y . . . TIPARP 25976 broad.mit.edu 36 3 157878578 157878578 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015508 exon2 c.G398A p.R133Q . . . LEKR1 389170 broad.mit.edu 36 3 158245928 158245928 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004316 exon13 c.C1774T p.R592C . . . VEPH1 79674 broad.mit.edu 36 3 158628808 158628808 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167911 exon5 c.C693T p.L231L . . . KPNA4 3840 broad.mit.edu 36 3 161736335 161736335 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002268 exon3 c.T159C p.H53H . . . PPM1L 151742 broad.mit.edu 36 3 162162287 162162287 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139245 exon2 c.G469T p.D157Y . . . GALNTL2 117248 broad.mit.edu 36 3 16236036 16236036 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054110 exon7 c.C1515A p.F505L . . . NMD3 51068 broad.mit.edu 36 3 162425446 162425446 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015938 exon3 c.A79C p.N27H . . . NMD3 51068 broad.mit.edu 36 3 162451310 162451310 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015938 exon16 c.G1430A p.R477Q . . . OXNAD1 92106 broad.mit.edu 36 3 16318365 16318365 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138381 exon7 c.G661A p.E221K . . . DAZL 1618 broad.mit.edu 36 3 16613309 16613309 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001351 exon6 c.T450G p.T150T . . . SI 6476 broad.mit.edu 36 3 166179861 166179861 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001041 exon48 c.G5467T p.E1823X . . . SI 6476 broad.mit.edu 36 3 166250283 166250283 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001041 exon14 c.G1587A p.P529P . . . SLITRK3 22865 broad.mit.edu 36 3 166390420 166390420 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014926 exon2 c.C893T p.S298L . . . ZBBX 79740 broad.mit.edu 36 3 168528584 168528584 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024687 exon11 c.G702A p.T234T . . . SERPINI2 5276 broad.mit.edu 36 3 168646901 168646901 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006217 exon8 c.C1114A p.L372M . . . WDR49 151790 broad.mit.edu 36 3 168705882 168705882 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178824 exon13 c.G1735T p.D579Y . . . GOLIM4 27333 broad.mit.edu 36 3 169210861 169210861 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014498 exon16 c.C1981T p.R661X . . . PLCL2 23228 broad.mit.edu 36 3 17026514 17026514 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144382 exon3 c.G653T p.R218I . . . MECOM 2122 broad.mit.edu 36 3 170323118 170323118 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105077 exon6 c.C550T p.R184C . . . MYNN 55892 broad.mit.edu 36 3 170979332 170979332 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018657 exon3 c.G349T p.D117Y . . . PLCL2 23228 broad.mit.edu 36 3 17106293 17106293 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015184 exon6 c.T2891C p.F964S . . . GPR160 26996 broad.mit.edu 36 3 171284814 171284814 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014373 exon4 c.T360G p.Y120X . . . SLC2A2 6514 broad.mit.edu 36 3 172205780 172205780 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000340 exon7 c.C951T p.S317S . . . SLC2A2 6514 broad.mit.edu 36 3 172206472 172206472 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000340 exon6 c.C729A p.P243P . . . PLD1 5337 broad.mit.edu 36 3 172938410 172938410 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130081 exon2 c.C126T p.Y42Y . . . TBC1D5 9779 broad.mit.edu 36 3 17308469 17308469 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001134380 exon15 c.C1167T p.L389L . . . FNDC3B 64778 broad.mit.edu 36 3 173529513 173529513 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135095 exon12 c.A1332G p.A444A . . . ECT2 1894 broad.mit.edu 36 3 173963266 173963266 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018098 exon8 c.G888T p.K296N . . . SPATA16 83893 broad.mit.edu 36 3 174249455 174249455 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031955 exon3 c.C736A p.L246I . . . TBL1XR1 79718 broad.mit.edu 36 3 178247800 178247800 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024665 exon9 c.A846G p.L282L . . . TBL1XR1 79718 broad.mit.edu 36 3 178250498 178250498 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024665 exon7 c.T683C p.V228A . . . PIK3CA 5290 broad.mit.edu 36 3 180404243 180404243 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006218 exon5 c.T1031C p.V344A PIK3CA,central_nervous_system,brain,Substitution - Missense,0 . . PIK3CA 5290 broad.mit.edu 36 3 180404995 180404995 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006218 exon6 c.G1070A p.R357Q . . . PIK3CA 5290 broad.mit.edu 36 3 180430787 180430787 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006218 exon20 c.T2865G p.V955V . . . PIK3CA 5290 broad.mit.edu 36 3 180434701 180434701 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006218 exon21 c.A3062G p.Y1021C PIK3CA,ovary,NS,Substitution - Missense,0 . . MFN1 55669 broad.mit.edu 36 3 180575737 180575737 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033540 exon10 c.C1011T p.F337F . . . GNB4 59345 broad.mit.edu 36 3 180615445 180615445 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021629 exon6 c.G352A p.D118N . . . ACTL6A 86 broad.mit.edu 36 3 180774875 180774875 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178042 exon5 c.G276T p.E92D . . . MRPL47 57129 broad.mit.edu 36 3 180789407 180789407 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177988 exon6 c.C370A p.L124I . . . USP13 8975 broad.mit.edu 36 3 180920442 180920442 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003940 exon7 c.G826T p.E276X . . . PEX5L 51555 broad.mit.edu 36 3 181008164 181008164 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016559 exon14 c.C1668T p.G556G . . . TTC14 151613 broad.mit.edu 36 3 181810998 181810998 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133462 exon12 c.G2287T p.E763X . . . CCDC39 339829 broad.mit.edu 36 3 181855312 181855312 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181426 exon7 c.C862T p.R288C . . . FXR1 8087 broad.mit.edu 36 3 182163542 182163542 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013438 exon13 c.C1168T p.R390C . . . SOX2 6657 broad.mit.edu 36 3 182913444 182913444 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003106 exon1 c.A602G p.D201G . . . LAMP3 27074 broad.mit.edu 36 3 184336247 184336247 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014398 exon5 c.G1069A p.D357N . . . MCF2L2 23101 broad.mit.edu 36 3 184406678 184406678 + Missense_Mutation SNP G A A rs61750384 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015078 exon24 c.C2731T p.R911C . . . MCF2L2 23101 broad.mit.edu 36 3 184489691 184489691 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015078 exon14 c.C1687T p.R563C . . . MCF2L2 23101 broad.mit.edu 36 3 184497537 184497537 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015078 exon12 c.G1418A p.G473D . . . MCF2L2 23101 broad.mit.edu 36 3 184539308 184539308 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015078 exon5 c.C460T p.R154X . . . KLHL24 54800 broad.mit.edu 36 3 184850909 184850909 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017644 exon3 c.G71A p.R24Q . . . KLHL24 54800 broad.mit.edu 36 3 184851016 184851016 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017644 exon3 c.C178T p.R60C . . . HTR3C 170572 broad.mit.edu 36 3 185257412 185257412 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130770 exon5 c.C445T p.R149X . . . HTR3E 285242 broad.mit.edu 36 3 185305324 185305324 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182589 exon4 c.C490T p.R164C . . . ECE2 9718 broad.mit.edu 36 3 185477382 185477382 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014693 exon3 c.C489T p.F163F . . . ECE2 9718 broad.mit.edu 36 3 185478788 185478788 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014693 exon6 c.T1097C p.V366A . . . EIF4G1 1981 broad.mit.edu 36 3 185522231 185522231 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182917 exon9 c.G1165A p.E389K . . . CLCN2 1181 broad.mit.edu 36 3 185558118 185558118 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_004366 exon7 c.C756T p.F252F . . . MAGEF1 64110 broad.mit.edu 36 3 185911967 185911967 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022149 exon1 c.C337A p.L113M . . . VPS8 23355 broad.mit.edu 36 3 186115891 186115891 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009921 exon27 c.A2317C p.I773L . . . VPS8 23355 broad.mit.edu 36 3 186130968 186130968 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009921 exon33 c.A2816C p.Y939S . . . VPS8 23355 broad.mit.edu 36 3 186183503 186183503 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009921 exon41 c.C3512A p.S1171Y . . . EHHADH 1962 broad.mit.edu 36 3 186393046 186393046 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166415 exon7 c.C1546T p.R516C . . . MAP3K13 9175 broad.mit.edu 36 3 186673558 186673558 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004721 exon11 c.G1745A p.S582N . . . MAP3K13 9175 broad.mit.edu 36 3 186673679 186673679 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004721 exon11 c.C1866A p.H622Q . . . ETV5 2119 broad.mit.edu 36 3 187257936 187257936 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004454 exon10 c.G1009A p.D337N . . . TBCCD1 55171 broad.mit.edu 36 3 187754883 187754883 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134415 exon6 c.C1398A p.F466L . . . HRG 3273 broad.mit.edu 36 3 187869520 187869520 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000412 exon2 c.C286T p.R96C . . . HRG 3273 broad.mit.edu 36 3 187873296 187873296 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000412 exon5 c.C585T p.F195F . . . RFC4 5984 broad.mit.edu 36 3 187998088 187998088 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002916 exon4 c.C220A p.L74I . . . RTP1 132112 broad.mit.edu 36 3 188400437 188400437 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153708 exon2 c.C677T p.S226L . . . SST 6750 broad.mit.edu 36 3 188869635 188869635 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001048 exon2 c.G263T p.R88I . . . TP63 8626 broad.mit.edu 36 3 191008961 191008961 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114980 exon2 c.C249T p.F83F . . . LEPREL1 55214 broad.mit.edu 36 3 191172383 191172383 + Nonsense_Mutation SNP G A A rs35067805 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134418 exon12 c.C1264T p.R422X . . . OSTN 344901 broad.mit.edu 36 3 192419402 192419402 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198184 exon2 c.A275G p.D92G . . . CCDC50 152137 broad.mit.edu 36 3 192570438 192570438 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174908 exon5 c.G367A p.E123K . . . KCNH8 131096 broad.mit.edu 36 3 19454734 19454734 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144633 exon8 c.C1252T p.R418X . . . OPA1 4976 broad.mit.edu 36 3 194815286 194815286 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130832 exon2 c.G113A p.R38Q . . . ATP13A3 79572 broad.mit.edu 36 3 195643431 195643431 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_024524 exon15 c.C1608T p.S536S . . . LSG1 55341 broad.mit.edu 36 3 195844115 195844115 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018385 exon14 c.C1948T p.R650C . . . PCYT1A 5130 broad.mit.edu 36 3 197458660 197458660 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005017 exon6 c.C461T p.T154I . . . TM4SF19 116211 broad.mit.edu 36 3 197535133 197535133 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138461 exon5 c.T582C p.H194H . . . UBXN7 26043 broad.mit.edu 36 3 197603155 197603155 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015562 exon5 c.G394A p.D132N . . . C3orf34 84984 broad.mit.edu 36 3 197919066 197919066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032898 exon3 c.C257T p.S86L . . . PIGX 54965 broad.mit.edu 36 3 197945147 197945147 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017861 exon6 c.A754C p.K252Q . . . SENP5 205564 broad.mit.edu 36 3 198097173 198097173 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_152699 exon2 c.C724T p.R242W . . . DLG1 1739 broad.mit.edu 36 3 198405736 198405736 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004087 exon5 c.A440C p.N147T . . . FYTTD1 84248 broad.mit.edu 36 3 198967808 198967808 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011537 exon3 c.G140A p.G47E . . . LRCH3 84859 broad.mit.edu 36 3 199031656 199031656 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032773 exon4 c.G598T p.D200Y . . . IQCG 84223 broad.mit.edu 36 3 199155207 199155207 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032263 exon4 c.A121G p.T41A . . . KAT2B 8850 broad.mit.edu 36 3 20142470 20142470 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003884 exon10 c.G1483T p.E495X . . . KAT2B 8850 broad.mit.edu 36 3 20142581 20142581 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003884 exon10 c.G1594T p.E532X . . . KAT2B 8850 broad.mit.edu 36 3 20156729 20156729 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003884 exon13 c.G1873T p.E625X . . . SGOL1 151648 broad.mit.edu 36 3 20177656 20177656 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199256 exon8 c.C824T p.S275L . . . NR1D2 9975 broad.mit.edu 36 3 23981542 23981542 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005126 exon6 c.C1217T p.S406L . . . THRB 7068 broad.mit.edu 36 3 24206755 24206755 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000461 exon4 c.T97C p.S33P . . . RARB 5915 broad.mit.edu 36 3 25477739 25477739 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000965 exon2 c.C209A p.S70Y . . . NGLY1 55768 broad.mit.edu 36 3 25753850 25753850 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145294 exon6 c.C856T p.R286C . . . OXSM 54995 broad.mit.edu 36 3 25808224 25808224 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017897 exon2 c.G709A p.D237N . . . EOMES 8320 broad.mit.edu 36 3 27736754 27736754 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005442 exon2 c.C948T p.F316F . . . IL5RA 3568 broad.mit.edu 36 3 3118430 3118430 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000564 exon6 c.G313A p.D105N . . . IL5RA 3568 broad.mit.edu 36 3 3119448 3119448 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000564 exon5 c.C139A p.L47I . . . OSBPL10 114884 broad.mit.edu 36 3 31846547 31846547 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017784 exon4 c.G718A p.E240K . . . CNOT10 25904 broad.mit.edu 36 3 32753976 32753976 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015442 exon13 c.G1585T p.E529X . . . GLB1 2720 broad.mit.edu 36 3 33033241 33033241 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135602 exon11 c.A1050G p.G350G . . . FBXL2 25827 broad.mit.edu 36 3 33381143 33381143 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171713 exon5 c.C218T p.S73L . . . ARPP21 10777 broad.mit.edu 36 3 35738220 35738220 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016300 exon14 c.G1115A p.R372H . . . DCLK3 85443 broad.mit.edu 36 3 36754465 36754465 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033403 exon2 c.G690T p.E230D . . . TRANK1 9881 broad.mit.edu 36 3 36848923 36848923 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014831 exon21 c.G7023A p.G2341G . . . TRANK1 9881 broad.mit.edu 36 3 36871974 36871974 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014831 exon12 c.T4111C p.Y1371H . . . TRANK1 9881 broad.mit.edu 36 3 36872426 36872426 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014831 exon12 c.G3659T p.R1220I . . . TRANK1 9881 broad.mit.edu 36 3 36873943 36873943 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014831 exon12 c.G2142A p.E714E . . . EPM2AIP1 9852 broad.mit.edu 36 3 37007995 37007995 + Silent SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014805 exon1 c.G1578C p.G526G . . . EPM2AIP1 9852 broad.mit.edu 36 3 37008709 37008709 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014805 exon1 c.C864T p.S288S . . . GOLGA4 2803 broad.mit.edu 36 3 37298666 37298666 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172713 exon4 c.G442T p.D148Y . . . GOLGA4 2803 broad.mit.edu 36 3 37343200 37343200 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172713 exon15 c.G4885A p.E1629K . . . CHL1 10752 broad.mit.edu 36 3 377097 377097 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006614 exon12 c.T1296C p.I432I . . . SLC22A14 9389 broad.mit.edu 36 3 38332166 38332166 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004803 exon8 c.T1492C p.F498L . . . XYLB 9942 broad.mit.edu 36 3 38379474 38379474 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005108 exon4 c.G253A p.D85N . . . ACVR2B 93 broad.mit.edu 36 3 38494426 38494426 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001106 exon3 c.G331A p.E111K . . . SCN5A 6331 broad.mit.edu 36 3 38567413 38567413 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099405 exon27 c.C5400T p.A1800A . . . SCN5A 6331 broad.mit.edu 36 3 38567887 38567887 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099405 exon27 c.C4926T p.I1642I . . . SCN5A 6331 broad.mit.edu 36 3 38570799 38570799 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099405 exon26 c.C4734T p.F1578F . . . SCN5A 6331 broad.mit.edu 36 3 38603908 38603908 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099405 exon15 c.G2423A p.R808H . . . SCN5A 6331 broad.mit.edu 36 3 38614282 38614282 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099405 exon14 c.C2204T p.A735V . . . SCN10A 6336 broad.mit.edu 36 3 38787849 38787849 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006514 exon4 c.G524T p.R175I . . . SCN11A 11280 broad.mit.edu 36 3 38867119 38867119 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014139 exon25 c.A4184C p.K1395T . . . GORASP1 64689 broad.mit.edu 36 3 39117264 39117264 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031899 exon5 c.G544A p.A182T . . . TTC21A 199223 broad.mit.edu 36 3 39153413 39153413 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105513 exon23 c.G2992A p.E998K . . . XIRP1 165904 broad.mit.edu 36 3 39202656 39202656 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194293 exon2 c.A3285C p.K1095N . . . CX3CR1 1524 broad.mit.edu 36 3 39282673 39282673 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001171174 exon2 c.T428C p.I143T . . . CCR8 1237 broad.mit.edu 36 3 39349190 39349190 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005201 exon2 c.T364C p.F122L . . . ZNF619 285267 broad.mit.edu 36 3 40503603 40503603 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145083 exon4 c.G466T p.E156X . . . ZNF619 285267 broad.mit.edu 36 3 40504114 40504114 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145083 exon4 c.A977C p.K326T . . . ZNF621 285268 broad.mit.edu 36 3 40549197 40549197 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098414 exon5 c.G932T p.R311I . . . ZNF621 285268 broad.mit.edu 36 3 40549266 40549266 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098414 exon5 c.T1001G p.F334C . . . CTNNB1 1499 broad.mit.edu 36 3 41241082 41241082 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098210 exon3 c.G75A p.W25X CTNNB1,stomach,NS,Substitution - Missense,+1 . . ULK4 54986 broad.mit.edu 36 3 41698123 41698123 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017886 exon29 c.G2858A p.R953Q . . . CCDC13 152206 broad.mit.edu 36 3 42773681 42773681 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144719 exon3 c.G251A p.R84Q . . . CYP8B1 1582 broad.mit.edu 36 3 42892236 42892236 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004391 exon1 c.G77A p.R26Q . . . C3orf39 84892 broad.mit.edu 36 3 43097153 43097153 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032806 exon2 c.G775A p.V259I . . . C3orf39 84892 broad.mit.edu 36 3 43097322 43097322 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032806 exon2 c.C606A p.H202Q . . . ABHD5 51099 broad.mit.edu 36 3 43718918 43718918 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016006 exon3 c.G341A p.R114Q . . . ZNF445 353274 broad.mit.edu 36 3 44463747 44463747 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181489 exon8 c.G2420A p.R807Q . . . ZNF167 55888 broad.mit.edu 36 3 44587654 44587654 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018651 exon6 c.G2048T p.R683I . . . ZNF502 91392 broad.mit.edu 36 3 44738894 44738894 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033210 exon4 c.C1581A p.F527L . . . ZDHHC3 51304 broad.mit.edu 36 3 44975753 44975753 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135179 exon2 c.C180T p.F60F . . . FYCO1 79443 broad.mit.edu 36 3 45947747 45947747 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024513 exon16 c.C4071T p.I1357I . . . CCR1 1230 broad.mit.edu 36 3 46220024 46220024 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001295 exon2 c.C785A p.S262Y . . . ITPR1 3708 broad.mit.edu 36 3 4662281 4662281 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099952 exon10 c.C724T p.L242L . . . SETD2 29072 broad.mit.edu 36 3 47133136 47133136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014159 exon4 c.C4567T p.R1523C . . . SCAP 22937 broad.mit.edu 36 3 47442512 47442512 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_012235 exon7 c.G889A p.A297T . . . CDC25A 993 broad.mit.edu 36 3 48194378 48194378 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001789 exon7 c.C654T p.F218F CDC25A,kidney,NS,Substitution - Missense,-2 . . ITPR1 3708 broad.mit.edu 36 3 4828086 4828086 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099952 exon53 c.C7266A p.F2422L . . . ZNF589 51385 broad.mit.edu 36 3 48284686 48284686 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016089 exon4 c.C501A p.F167L . . . CCDC51 79714 broad.mit.edu 36 3 48449455 48449455 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024661 exon4 c.G603T p.K201N . . . COL7A1 1294 broad.mit.edu 36 3 48590951 48590951 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000094 exon63 c.G5426T p.G1809V . . . SLC25A20 788 broad.mit.edu 36 3 48891848 48891848 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000387 exon4 c.G364A p.V122I . . . ARIH2 10425 broad.mit.edu 36 3 48986199 48986199 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006321 exon9 c.G834T p.T278T . . . QARS 5859 broad.mit.edu 36 3 49110491 49110491 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005051 exon23 c.G2215A p.D739N . . . USP19 10869 broad.mit.edu 36 3 49126507 49126507 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199162 exon17 c.G2391T p.E797D . . . BSN 8927 broad.mit.edu 36 3 49655360 49655360 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003458 exon3 c.C1289T p.P430L . . . BSN 8927 broad.mit.edu 36 3 49668642 49668642 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_003458 exon5 c.C6649T p.R2217W . . . CAMKV 79012 broad.mit.edu 36 3 49873732 49873732 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024046 exon6 c.G447T p.E149D . . . BHLHE40 8553 broad.mit.edu 36 3 4997090 4997090 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003670 exon3 c.T255G p.L85L . . . CACNA2D2 9254 broad.mit.edu 36 3 50391972 50391972 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006030 exon11 c.T1047C p.N349N . . . DOCK3 1795 broad.mit.edu 36 3 51290167 51290167 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004947 exon26 c.C2724T p.I908I . . . DOCK3 1795 broad.mit.edu 36 3 51345660 51345660 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004947 exon35 c.C3506T p.A1169V . . . DNAH1 25981 broad.mit.edu 36 3 52402509 52402509 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015512 exon66 c.C10594T p.R3532C . . . PBRM1 55193 broad.mit.edu 36 3 52573150 52573150 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018313 exon24 c.T3756G p.F1252L . . . NEK4 6787 broad.mit.edu 36 3 52772528 52772528 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193533 exon4 c.G552T p.K184N . . . ITIH3 3699 broad.mit.edu 36 3 52810038 52810038 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002217 exon11 c.A1219C p.K407Q . . . SFMBT1 51460 broad.mit.edu 36 3 52916218 52916218 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005158 exon20 c.A2238C p.I746I . . . CACNA1D 776 broad.mit.edu 36 3 53817752 53817752 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001128839 exon44 c.G5714A p.R1905H . . . CACNA2D3 55799 broad.mit.edu 36 3 54636883 54636883 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018398 exon10 c.C993T p.F331F . . . LRTM1 57408 broad.mit.edu 36 3 54933852 54933852 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020678 exon2 c.G438T p.E146D . . . ERC2 26059 broad.mit.edu 36 3 56444000 56444000 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015576 exon2 c.C76T p.R26C . . . C3orf63 23272 broad.mit.edu 36 3 56642910 56642910 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001112736 exon18 c.C2949G p.D983E . . . C3orf63 23272 broad.mit.edu 36 3 56655758 56655758 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001112736 exon14 c.G2047T p.E683X . . . APPL1 26060 broad.mit.edu 36 3 57258535 57258535 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012096 exon11 c.A971G p.D324G . . . PDE12 201626 broad.mit.edu 36 3 57518437 57518437 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177966 exon1 c.A1291G p.R431G . . . FLNB 2317 broad.mit.edu 36 3 58084083 58084084 + Missense_Mutation DNP AC TT TT novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 AC AC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001164317 exon21 c.3350_3351TT . . . . FLNB 2317 broad.mit.edu 36 3 58093695 58093695 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164317 exon27 c.G4604A p.R1535H . . . PDHB 5162 broad.mit.edu 36 3 58392691 58392691 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000925 exon3 c.G157A p.V53I . . . FAM3D 131177 broad.mit.edu 36 3 58597121 58597121 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138805 exon9 c.C525T p.F175F . . . PTPRG 5793 broad.mit.edu 36 3 62253251 62253251 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002841 exon29 c.C4171T p.P1391S . . . CADPS 8618 broad.mit.edu 36 3 62438993 62438993 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183393 exon20 c.C3075T p.I1025I . . . CADPS 8618 broad.mit.edu 36 3 62606475 62606475 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183393 exon6 c.G1287T p.E429D . . . CADPS 8618 broad.mit.edu 36 3 62623072 62623072 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183393 exon4 c.G926A p.R309Q . . . CADPS 8618 broad.mit.edu 36 3 62714302 62714302 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183393 exon3 c.G742A p.E248K . . . ATXN7 6314 broad.mit.edu 36 3 63940720 63940720 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001177387 exon5 c.G589A p.G197R . . . PRICKLE2 166336 broad.mit.edu 36 3 64060486 64060486 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198859 exon8 c.C1816T p.R606C . . . ADAMTS9 56999 broad.mit.edu 36 3 64511640 64511640 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182920 exon31 c.G4837A p.E1613K . . . ADAMTS9 56999 broad.mit.edu 36 3 64583231 64583231 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182920 exon17 c.C2461T p.R821C . . . KBTBD8 84541 broad.mit.edu 36 3 67141038 67141038 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032505 exon4 c.G1345T p.E449X . . . TMF1 7110 broad.mit.edu 36 3 69170533 69170533 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007114 exon8 c.G2023A p.A675T . . . TMF1 7110 broad.mit.edu 36 3 69175652 69175652 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007114 exon4 c.G1517T p.R506I . . . ARL6IP5 10550 broad.mit.edu 36 3 69233822 69233822 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006407 exon2 c.T319C p.L107L . . . LMOD3 56203 broad.mit.edu 36 3 69251166 69251166 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198271 exon2 c.C1030T p.R344W . . . GXYLT2 727936 broad.mit.edu 36 3 73106836 73106836 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080393 exon7 c.C1168A p.L390I . . . GRM7 2917 broad.mit.edu 36 3 7696965 7696965 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000844 exon9 c.A2681C p.E894A . . . ROBO2 6092 broad.mit.edu 36 3 77229916 77229916 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001128929 exon1 c.C64T p.R22C . . . ROBO2 6092 broad.mit.edu 36 3 77749463 77749463 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002942 exon22 c.C3403T p.R1135X . . . ROBO1 6091 broad.mit.edu 36 3 78793062 78793062 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002941 exon16 c.C2128A p.L710I . . . LMCD1 29995 broad.mit.edu 36 3 8549502 8549502 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014583 exon2 c.A122C p.H41P . . . LMCD1 29995 broad.mit.edu 36 3 8553904 8553904 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014583 exon3 c.G165A p.E55E . . . CADM2 253559 broad.mit.edu 36 3 86044235 86044235 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167674 exon5 c.G525T p.E175D . . . CADM2 253559 broad.mit.edu 36 3 86093394 86093394 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001167674 exon7 c.C850A p.L284I . . . OXTR 5021 broad.mit.edu 36 3 8769818 8769818 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000916 exon4 c.G1015A p.E339K . . . PROS1 5627 broad.mit.edu 36 3 95102455 95102455 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000313 exon7 c.G610T p.E204X . . . MTMR14 64419 broad.mit.edu 36 3 9694030 9694030 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_022485 exon8 c.C781T p.R261W . . . CAMK1 8536 broad.mit.edu 36 3 9779710 9779710 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003656 exon5 c.G317A p.R106H . . . OR5H2 79310 broad.mit.edu 36 3 99484488 99484488 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005482 exon1 c.A67G p.T23A . . . OR5K4 403278 broad.mit.edu 36 3 99555480 99555480 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005517 exon1 c.C93A p.F31L . . . OR5K1 26339 broad.mit.edu 36 3 99671654 99671654 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004736 exon1 c.C544T p.L182F . . . TMEM111 55831 broad.mit.edu 36 3 9980795 9980795 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018447 exon8 c.C744T p.F248F . . . ST3GAL6 10402 broad.mit.edu 36 3 99975465 99975465 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006100 exon6 c.C283T p.R95X . . . CRYBG3 131544 broad.mit.edu 36 3 99078915 99078915 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CRYBG3 131544 broad.mit.edu 36 3 99117225 99117225 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZNF518B 85460 broad.mit.edu 36 4 10056424 10056424 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053042 exon3 c.G627A p.T209T . . . RG9MTD2 93587 broad.mit.edu 36 4 100698300 100698300 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134665 exon3 c.C277T p.R93X . . . MTTP 4547 broad.mit.edu 36 4 100747048 100747048 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000253 exon12 c.C1465A p.L489I . . . CLNK 116449 broad.mit.edu 36 4 10176777 10176777 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052964 exon6 c.G246A p.S82S . . . MANBA 4126 broad.mit.edu 36 4 103772350 103772350 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005908 exon17 c.G2552A p.R851Q . . . CENPE 1062 broad.mit.edu 36 4 104249468 104249468 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001813 exon48 c.C7952A p.S2651Y . . . TACR3 6870 broad.mit.edu 36 4 104859815 104859815 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001059 exon1 c.A467C p.N156T . . . GSTCD 79807 broad.mit.edu 36 4 106975173 106975173 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_024751 exon9 c.A1376G p.N459S . . . SGMS2 166929 broad.mit.edu 36 4 109049253 109049253 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136257 exon5 c.G811A p.E271K . . . OSTC 58505 broad.mit.edu 36 4 109791271 109791271 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_021227 exon1 c.T11C p.L4S . . . COL25A1 84570 broad.mit.edu 36 4 109989367 109989367 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198721 exon26 c.G1431A p.E477E . . . SEC24B 10427 broad.mit.edu 36 4 110647020 110647020 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006323 exon7 c.A1576C p.N526H . . . ANK2 287 broad.mit.edu 36 4 114498368 114498368 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001148 exon38 c.C9145T p.R3049W . . . ANK2 287 broad.mit.edu 36 4 114501450 114501450 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020977 exon38 c.G4449A p.R1483R . . . ANK2 287 broad.mit.edu 36 4 114504009 114504009 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020977 exon39 c.C4568A p.S1523Y . . . TRAM1L1 133022 broad.mit.edu 36 4 118224900 118224900 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152402 exon1 c.G1098T p.E366D . . . SEC24D 9871 broad.mit.edu 36 4 119893304 119893304 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014822 exon12 c.C1609A p.H537N . . . SEC24D 9871 broad.mit.edu 36 4 119898383 119898383 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014822 exon11 c.G1362T p.K454N . . . SYNPO2 171024 broad.mit.edu 36 4 120171006 120171006 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133477 exon4 c.C1628T p.S543L . . . SYNPO2 171024 broad.mit.edu 36 4 120171642 120171642 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133477 exon4 c.C2264T p.T755I . . . USP53 54532 broad.mit.edu 36 4 120412097 120412097 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019050 exon15 c.A1634C p.K545T . . . PRDM5 11107 broad.mit.edu 36 4 121938904 121938904 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018699 exon10 c.G1156A p.A386T . . . PRDM5 11107 broad.mit.edu 36 4 121959016 121959016 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018699 exon5 c.G592T p.E198X . . . TNIP3 79931 broad.mit.edu 36 4 122295204 122295204 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128843 exon7 c.G444A p.A148A . . . KIAA1109 84162 broad.mit.edu 36 4 123387841 123387841 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015312 exon33 c.G5391T p.K1797N . . . KIAA1109 84162 broad.mit.edu 36 4 123490126 123490126 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015312 exon77 c.C13510T p.R4504C . . . ADAD1 132612 broad.mit.edu 36 4 123520760 123520760 + Missense_Mutation SNP C T T rs13106730 byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139243 exon3 c.C86T p.A29V . . . SPATA5 166378 broad.mit.edu 36 4 124074059 124074059 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145207 exon4 c.A462C p.E154D . . . ANKRD50 57182 broad.mit.edu 36 4 125810314 125810314 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167882 exon3 c.T3031G p.S1011A . . . FAT4 79633 broad.mit.edu 36 4 126462027 126462027 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon1 c.C5011T p.R1671C . . . FAT4 79633 broad.mit.edu 36 4 126556207 126556207 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon5 c.C6639T p.V2213V . . . FAT4 79633 broad.mit.edu 36 4 126589791 126589791 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon9 c.G8170T p.E2724X . . . FAT4 79633 broad.mit.edu 36 4 126590888 126590888 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon9 c.C9267T p.F3089F . . . INTU 27152 broad.mit.edu 36 4 128784435 128784435 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015693 exon2 c.C456A p.V152V . . . INTU 27152 broad.mit.edu 36 4 128851675 128851675 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015693 exon14 c.C2527T p.R843C . . . SLC25A31 83447 broad.mit.edu 36 4 128907791 128907791 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031291 exon4 c.G599A p.R200Q . . . PLK4 10733 broad.mit.edu 36 4 129022440 129022440 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190799 exon2 c.T35G p.F12C . . . PHF17 79960 broad.mit.edu 36 4 130012795 130012795 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199320 exon11 c.G2457T p.K819N . . . PCDH18 54510 broad.mit.edu 36 4 138661855 138661855 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon4 c.T3186C p.F1062F . . . PCDH18 54510 broad.mit.edu 36 4 138671273 138671273 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon1 c.A1420T p.I474F . . . PCDH18 54510 broad.mit.edu 36 4 138672141 138672141 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon1 c.C552T p.I184I . . . NAA15 80155 broad.mit.edu 36 4 140519363 140519363 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057175 exon17 c.A2060C p.K687T . . . RNF150 57484 broad.mit.edu 36 4 142089948 142089948 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020724 exon3 c.C764T p.A255V . . . INPP4B 8821 broad.mit.edu 36 4 143169471 143169471 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003866 exon27 c.A2689C p.K897Q . . . USP38 84640 broad.mit.edu 36 4 144354750 144354750 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032557 exon9 c.A2171G p.Y724C . . . GAB1 2549 broad.mit.edu 36 4 144609713 144609713 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207123 exon11 c.C2096A p.A699D . . . SMARCA5 8467 broad.mit.edu 36 4 144662156 144662156 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003601 exon3 c.G377A p.R126Q . . . GYPA 2993 broad.mit.edu 36 4 145259327 145259327 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002099 exon4 c.C261A p.F87L . . . ZNF718 255403 broad.mit.edu 36 4 145383 145383 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039127 exon4 c.G908T p.R303I . . . ZNF718 255403 broad.mit.edu 36 4 145819 145819 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039127 exon4 c.T1344C p.D448D . . . OTUD4 54726 broad.mit.edu 36 4 146284924 146284924 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102653 exon15 c.G1340A p.R447Q . . . MMAA 166785 broad.mit.edu 36 4 146794674 146794674 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172250 exon6 c.C898T p.R300X . . . ZNF827 152485 broad.mit.edu 36 4 146915160 146915160 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178835 exon11 c.C2808T p.F936F . . . POU4F2 5458 broad.mit.edu 36 4 147781090 147781090 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004575 exon2 c.T910C p.S304P . . . NR3C2 4306 broad.mit.edu 36 4 149221992 149221992 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001166104 exon8 c.A2557C p.K853Q . . . NR3C2 4306 broad.mit.edu 36 4 149293127 149293127 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166104 exon5 c.C2102T p.S701L . . . C1QTNF7 114905 broad.mit.edu 36 4 15053314 15053314 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031911 exon3 c.C663T p.F221F . . . MAB21L2 10586 broad.mit.edu 36 4 151723987 151723987 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006439 exon1 c.C356T p.A119V . . . LRBA 987 broad.mit.edu 36 4 151739680 151739680 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006726 exon38 c.G5975A p.R1992Q . . . CC2D2A 57545 broad.mit.edu 36 4 15190767 15190767 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080522 exon31 c.C3850T p.R1284C . . . LRBA 987 broad.mit.edu 36 4 151993036 151993036 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006726 exon23 c.G3276A p.E1092E . . . FBXL5 26234 broad.mit.edu 36 4 15247252 15247252 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012161 exon5 c.G729A p.S243S . . . PET112L 5188 broad.mit.edu 36 4 152845815 152845815 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004564 exon7 c.G934A p.E312K . . . TIGD4 201798 broad.mit.edu 36 4 153910560 153910560 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145720 exon2 c.A1047G p.T349T . . . TIGD4 201798 broad.mit.edu 36 4 153910799 153910799 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145720 exon2 c.C808T p.R270X . . . ARFIP1 27236 broad.mit.edu 36 4 154028754 154028754 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025593 exon7 c.C715T p.R239C . . . FHDC1 85462 broad.mit.edu 36 4 154101356 154101356 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033393 exon5 c.C760T p.R254W . . . FHDC1 85462 broad.mit.edu 36 4 154116431 154116431 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033393 exon11 c.C2538T p.G846G . . . DCHS2 54798 broad.mit.edu 36 4 155376855 155376855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon25 c.C7034T p.P2345L . . . DCHS2 54798 broad.mit.edu 36 4 155410523 155410523 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon19 c.C5191A p.L1731I . . . DCHS2 54798 broad.mit.edu 36 4 155475602 155475602 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142552 exon4 c.G2581A p.D861N . . . FGA 2243 broad.mit.edu 36 4 155725129 155725129 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000508 exon6 c.G2198A p.G733E . . . FGA 2243 broad.mit.edu 36 4 155726470 155726470 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021871 exon5 c.G1561A p.D521N . . . NPY2R 4887 broad.mit.edu 36 4 156355374 156355374 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000910 exon2 c.C833T p.A278V . . . GUCY1A3 2982 broad.mit.edu 36 4 156851607 156851607 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon6 c.G840A p.S280S . . . GUCY1A3 2982 broad.mit.edu 36 4 156853787 156853787 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon7 c.G1174T p.D392Y . . . GUCY1B3 2983 broad.mit.edu 36 4 156935988 156935988 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000857 exon7 c.C772T p.R258C . . . GUCY1B3 2983 broad.mit.edu 36 4 156940495 156940495 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000857 exon9 c.G994A p.D332N . . . ACCN5 51802 broad.mit.edu 36 4 156972449 156972449 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017419 exon9 c.C1304T p.A435V . . . GRIA2 2891 broad.mit.edu 36 4 158503528 158503528 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083620 exon15 c.G2393A p.R798Q . . . FAM198B 51313 broad.mit.edu 36 4 159311226 159311226 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001128424 exon2 c.G752A p.G251E . . . FNIP2 57600 broad.mit.edu 36 4 160002308 160002308 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020840 exon12 c.G1395T p.E465D . . . NPY5R 4889 broad.mit.edu 36 4 164492201 164492201 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006174 exon4 c.T1326C p.C442C . . . TRIM60 166655 broad.mit.edu 36 4 166181991 166181991 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152620 exon3 c.T1317G p.T439T . . . CPE 1363 broad.mit.edu 36 4 166605133 166605133 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001873 exon2 c.G449A p.R150H . . . CPE 1363 broad.mit.edu 36 4 166608395 166608395 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001873 exon3 c.G610A p.E204K . . . TLL1 7092 broad.mit.edu 36 4 167148602 167148602 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012464 exon7 c.G869T p.R290I . . . TLL1 7092 broad.mit.edu 36 4 167206353 167206353 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012464 exon16 c.C2076T p.F692F . . . TLL1 7092 broad.mit.edu 36 4 167239921 167239921 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012464 exon20 c.T2699G p.L900R . . . TLL1 7092 broad.mit.edu 36 4 167240075 167240075 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012464 exon20 c.C2853A p.L951L . . . SPOCK3 50859 broad.mit.edu 36 4 167899733 167899733 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016950 exon10 c.G993T p.K331N . . . CBR4 84869 broad.mit.edu 36 4 170148028 170148028 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032783 exon5 c.G562A p.D188N . . . CLCN3 1182 broad.mit.edu 36 4 170853369 170853369 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001829 exon8 c.C968A p.S323Y . . . MFAP3L 9848 broad.mit.edu 36 4 171149639 171149639 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021647 exon3 c.G695A p.R232H . . . CLRN2 645104 broad.mit.edu 36 4 17126124 17126125 + Missense_Mutation DNP TG AT AT novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 TG TG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001079827 exon1 c.137_138AT . . . . NCAPG 64151 broad.mit.edu 36 4 17439101 17439101 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022346 exon12 c.G1756A p.E586K . . . GLRA3 8001 broad.mit.edu 36 4 175840579 175840579 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042543 exon6 c.C661T p.L221L . . . WDR17 116966 broad.mit.edu 36 4 177330638 177330638 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181265 exon24 c.C3221A p.P1074H . . . SPATA4 132851 broad.mit.edu 36 4 177343005 177343005 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144644 exon6 c.G838A p.E280K . . . SPATA4 132851 broad.mit.edu 36 4 177346278 177346278 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144644 exon5 c.T791C p.V264A . . . ODZ3 55714 broad.mit.edu 36 4 183889266 183889266 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080477 exon15 c.C2947T p.P983S . . . ODZ3 55714 broad.mit.edu 36 4 183901520 183901520 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080477 exon18 c.C3583T p.R1195W . . . ODZ3 55714 broad.mit.edu 36 4 183912721 183912721 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080477 exon21 c.G4207A p.E1403K . . . ODZ3 55714 broad.mit.edu 36 4 183913240 183913240 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080477 exon21 c.C4726T p.R1576X . . . C4orf41 60684 broad.mit.edu 36 4 184852772 184852772 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199053 exon23 c.C2530T p.R844C . . . ACSL1 2180 broad.mit.edu 36 4 185916016 185916016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001995 exon19 c.C1835T p.A612V . . . ACSL1 2180 broad.mit.edu 36 4 185961629 185961629 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001995 exon2 c.A34G p.M12V . . . KIAA1430 57587 broad.mit.edu 36 4 186348659 186348659 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020827 exon2 c.C686T p.S229L . . . KIAA1430 57587 broad.mit.edu 36 4 186349187 186349187 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020827 exon2 c.C158T p.S53L . . . UFSP2 55325 broad.mit.edu 36 4 186573367 186573367 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018359 exon6 c.A620C p.K207T . . . FAM149A 25854 broad.mit.edu 36 4 187325345 187325345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006655 exon12 c.G1310A p.R437Q . . . KLKB1 3818 broad.mit.edu 36 4 187408539 187408539 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000892 exon7 c.C747T p.I249I . . . KLKB1 3818 broad.mit.edu 36 4 187415490 187415490 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000892 exon14 c.G1702T p.E568X . . . FAT1 2195 broad.mit.edu 36 4 187747147 187747147 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon27 c.G13360A p.E4454K . . . FAT1 2195 broad.mit.edu 36 4 187754914 187754914 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon25 c.G12774A p.P4258P . . . TRIML2 205860 broad.mit.edu 36 4 189249650 189249650 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173553 exon7 c.C1035T p.F345F . . . WHSC1 7468 broad.mit.edu 36 4 1922639 1922639 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133331 exon11 c.G1924A p.E642K . . . WHSC2 7469 broad.mit.edu 36 4 1963144 1963144 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005663 exon2 c.A340T p.T114S . . . HAUS3 79441 broad.mit.edu 36 4 2203553 2203553 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024511 exon5 c.G1711T p.E571X . . . GPR125 166647 broad.mit.edu 36 4 22072521 22072521 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145290 exon3 c.G338A p.R113Q . . . HAUS3 79441 broad.mit.edu 36 4 2207769 2207769 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024511 exon4 c.T1562G p.L521R . . . GBA3 57733 broad.mit.edu 36 4 22358367 22358367 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020973 exon3 c.C637T p.R213X . . . CCDC149 91050 broad.mit.edu 36 4 24448979 24448979 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173463 exon6 c.C386T p.T129M . . . ANAPC4 29945 broad.mit.edu 36 4 24999456 24999456 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013367 exon6 c.A463C p.I155L ANAPC4,large_intestine,colon,Substitution - Missense,0 . . SEL1L3 23231 broad.mit.edu 36 4 25369783 25369783 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015187 exon21 c.T2961G p.F987L . . . CCKAR 886 broad.mit.edu 36 4 26092597 26092597 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000730 exon5 c.A1048G p.T350A . . . TNIP2 79155 broad.mit.edu 36 4 2719223 2719223 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024309 exon2 c.G524A p.R175Q . . . NOP14 8602 broad.mit.edu 36 4 2929193 2929193 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003703 exon2 c.G268T p.E90X . . . GRK4 2868 broad.mit.edu 36 4 2985298 2985298 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182982 exon8 c.A686G p.E229G . . . PCDH7 5099 broad.mit.edu 36 4 30333535 30333535 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032456 exon1 c.G1393A p.D465N . . . PCDH7 5099 broad.mit.edu 36 4 30334045 30334045 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032456 exon1 c.A1903G p.N635D . . . HTT 3064 broad.mit.edu 36 4 3070833 3070833 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002111 exon3 c.G382A p.A128T . . . HTT 3064 broad.mit.edu 36 4 3101846 3101846 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002111 exon14 c.T1884C p.H628H . . . HTT 3064 broad.mit.edu 36 4 3152069 3152069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002111 exon36 c.G4642A p.D1548N . . . RGS12 6002 broad.mit.edu 36 4 3400176 3400176 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002926 exon16 c.G3505T p.E1169X . . . C4orf19 55286 broad.mit.edu 36 4 37268535 37268535 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001104629 exon4 c.A463G p.T155A . . . PGM2 55276 broad.mit.edu 36 4 37522542 37522542 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018290 exon7 c.G882A p.P294P . . . FAM114A1 92689 broad.mit.edu 36 4 38593081 38593081 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138389 exon8 c.G937A p.E313K . . . TMEM156 80008 broad.mit.edu 36 4 38649105 38649105 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024943 exon6 c.C871T p.P291S . . . KLHL5 51088 broad.mit.edu 36 4 38760112 38760112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015990 exon4 c.C976T p.R326C . . . RFC1 5981 broad.mit.edu 36 4 38986904 38986904 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002913 exon13 c.G1632T p.K544N . . . KLB 152831 broad.mit.edu 36 4 39112400 39112400 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175737 exon2 c.T1001G p.I334S . . . KLB 152831 broad.mit.edu 36 4 39112506 39112506 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175737 exon2 c.C1107A p.F369L . . . KLB 152831 broad.mit.edu 36 4 39124867 39124867 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175737 exon4 c.A2126G p.Y709C . . . LIAS 11019 broad.mit.edu 36 4 39143101 39143101 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194451 exon5 c.C434A p.S145Y . . . DCAF4L1 285429 broad.mit.edu 36 4 41678880 41678880 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029955 exon1 c.G314A p.R105Q . . . DCAF4L1 285429 broad.mit.edu 36 4 41679563 41679563 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029955 exon1 c.G997A p.G333S . . . SLC30A9 10463 broad.mit.edu 36 4 41782874 41782874 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006345 exon18 c.C1681T p.R561X . . . ATP8A1 10396 broad.mit.edu 36 4 42109714 42109714 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006095 exon37 c.G3471A p.T1157T . . . ATP8A1 10396 broad.mit.edu 36 4 42312848 42312848 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006095 exon5 c.G368A p.R123Q . . . ZNF721 170960 broad.mit.edu 36 4 425668 425668 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133474 exon3 c.A2588C p.K863T . . . ZNF721 170960 broad.mit.edu 36 4 425938 425938 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133474 exon3 c.A2318C p.K773T . . . GABRA2 2555 broad.mit.edu 36 4 46009470 46009470 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000807 exon5 c.C276A p.F92L . . . GABRB1 2560 broad.mit.edu 36 4 46728437 46728437 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000812 exon1 c.A12G p.V4V . . . COMMD8 54951 broad.mit.edu 36 4 47157039 47157039 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017845 exon2 c.G101A p.R34Q . . . CORIN 10699 broad.mit.edu 36 4 47483516 47483516 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006587 exon3 c.A392G p.Q131R . . . NFXL1 152518 broad.mit.edu 36 4 47551865 47551865 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152995 exon20 c.A2389C p.K797Q . . . FRYL 285527 broad.mit.edu 36 4 48287603 48287603 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015030 exon17 c.G1337T p.R446I . . . FRYL 285527 broad.mit.edu 36 4 48303247 48303247 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015030 exon10 c.G706A p.V236I . . . STK32B 55351 broad.mit.edu 36 4 5220945 5220945 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018401 exon3 c.C127T p.R43X . . . SGCB 6443 broad.mit.edu 36 4 52589716 52589716 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000232 exon4 c.T558G p.T186T . . . USP46 64854 broad.mit.edu 36 4 53187068 53187068 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_022832 exon4 c.A435C p.Q145H . . . PDGFRA 5156 broad.mit.edu 36 4 54824675 54824675 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon4 c.G452A p.R151H . . . KIT 3815 broad.mit.edu 36 4 55270441 55270441 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000222 exon7 c.G1210A p.A404T . . . KDR 3791 broad.mit.edu 36 4 55675848 55675848 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002253 exon5 c.A608C p.K203T . . . KDR 3791 broad.mit.edu 36 4 55682067 55682067 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002253 exon2 c.G115T p.D39Y . . . CLOCK 9575 broad.mit.edu 36 4 56009782 56009782 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004898 exon18 c.C1460T p.S487F . . . CLOCK 9575 broad.mit.edu 36 4 56020127 56020127 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004898 exon10 c.G618A p.E206E . . . EVC2 132884 broad.mit.edu 36 4 5615557 5615557 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166136 exon22 c.G3606T p.E1202D . . . CEP135 9662 broad.mit.edu 36 4 56560491 56560491 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025009 exon17 c.G2203A p.E735K . . . EVC2 132884 broad.mit.edu 36 4 5671145 5671145 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166136 exon15 c.C2427T p.F809F . . . AASDH 132949 broad.mit.edu 36 4 56914419 56914419 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181806 exon9 c.A1484C p.E495A . . . SRP72 6731 broad.mit.edu 36 4 57044108 57044108 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006947 exon9 c.C872T p.A291V . . . C4orf14 84273 broad.mit.edu 36 4 57538017 57538017 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032313 exon1 c.C492A p.F164L . . . POLR2B 5431 broad.mit.edu 36 4 57576517 57576517 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000938 exon14 c.A1893C p.Q631H . . . POLR2B 5431 broad.mit.edu 36 4 57591893 57591893 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000938 exon25 c.G3507A p.P1169P . . . LPHN3 23284 broad.mit.edu 36 4 62440999 62440999 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015236 exon7 c.G1307T p.G436V . . . LPHN3 23284 broad.mit.edu 36 4 62592800 62592800 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015236 exon22 c.G3548A p.R1183Q . . . CENPC1 1060 broad.mit.edu 36 4 68041303 68041303 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001812 exon15 c.C2298T p.F766F . . . STAP1 26228 broad.mit.edu 36 4 68123760 68123760 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012108 exon3 c.G255T p.K85N . . . UBA6 55236 broad.mit.edu 36 4 68173365 68173365 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018227 exon29 c.G2654A p.R885H . . . TMPRSS11B 132724 broad.mit.edu 36 4 68777587 68777587 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182502 exon8 c.G929T p.G310V . . . YTHDC1 91746 broad.mit.edu 36 4 68885435 68885435 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031732 exon4 c.A788G p.D263G . . . KIAA0232 9778 broad.mit.edu 36 4 6894815 6894815 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014743 exon4 c.C352T p.R118X . . . UGT2B10 7365 broad.mit.edu 36 4 69716988 69716988 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001075 exon1 c.T662G p.F221C . . . UGT2B11 10720 broad.mit.edu 36 4 70100868 70100868 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001073 exon6 c.C1469A p.S490Y . . . UGT2B11 10720 broad.mit.edu 36 4 70114729 70114729 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001073 exon1 c.C301T p.R101X . . . TBC1D14 57533 broad.mit.edu 36 4 7057549 7057549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113361 exon8 c.G1348A p.E450K . . . CSN2 1447 broad.mit.edu 36 4 70858052 70858052 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001891 exon5 c.C204T p.F68F . . . CCDC96 257236 broad.mit.edu 36 4 7094166 7094166 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153376 exon1 c.C1401T p.I467I . . . PROL1 58503 broad.mit.edu 36 4 71310079 71310079 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021225 exon3 c.G445A p.A149T . . . IGJ 3512 broad.mit.edu 36 4 71746679 71746679 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144646 exon2 c.G182A p.R61Q . . . UTP3 57050 broad.mit.edu 36 4 71773349 71773349 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_020368 exon1 c.G91T p.D31Y . . . UTP3 57050 broad.mit.edu 36 4 71774621 71774621 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020368 exon1 c.C1363T p.R455C . . . MOBKL1A 92597 broad.mit.edu 36 4 72043506 72043506 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173468 exon2 c.T66C p.G22G . . . ANKRD17 26057 broad.mit.edu 36 4 74219712 74219712 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198889 exon15 c.G2467T p.D823Y . . . ALB 213 broad.mit.edu 36 4 74498038 74498038 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000477 exon8 c.C881T p.S294L . . . BTC 685 broad.mit.edu 36 4 75900125 75900125 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001729 exon3 c.C249T p.R83R . . . G3BP2 9908 broad.mit.edu 36 4 76789909 76789909 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203504 exon11 c.C1079T p.P360L . . . USO1 8615 broad.mit.edu 36 4 76927245 76927245 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003715 exon8 c.C711T p.F237F . . . USO1 8615 broad.mit.edu 36 4 76940607 76940607 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003715 exon13 c.C1492T p.R498X . . . USO1 8615 broad.mit.edu 36 4 76941370 76941370 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003715 exon15 c.G1828A p.E610K . . . PPEF2 5470 broad.mit.edu 36 4 77004670 77004670 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006239 exon16 c.G1955A p.R652Q . . . PPEF2 5470 broad.mit.edu 36 4 77007576 77007576 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006239 exon14 c.C1670T p.S557L . . . SDAD1 55153 broad.mit.edu 36 4 77096297 77096297 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018115 exon21 c.G1871A p.R624Q . . . SHROOM3 57619 broad.mit.edu 36 4 77879995 77879995 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020859 exon5 c.A1645G p.T549A . . . AFAP1 60312 broad.mit.edu 36 4 7862344 7862344 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134647 exon9 c.G951A p.S317S . . . CXCL13 10563 broad.mit.edu 36 4 78747975 78747975 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006419 exon3 c.C159A p.I53I . . . MRPL1 65008 broad.mit.edu 36 4 79023449 79023449 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020236 exon3 c.A173C p.K58T . . . FRAS1 80144 broad.mit.edu 36 4 79647612 79647612 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon62 c.C9330A p.I3110I . . . BMP2K 55589 broad.mit.edu 36 4 80051707 80051707 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198892 exon16 c.G2982A p.G994G . . . PAQR3 152559 broad.mit.edu 36 4 80060726 80060726 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040202 exon6 c.A927G p.S309S . . . GK2 2712 broad.mit.edu 36 4 80547971 80547971 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033214 exon1 c.C408T p.F136F . . . ANTXR2 118429 broad.mit.edu 36 4 81195634 81195634 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145794 exon5 c.A390C p.Q130H . . . PRKG2 5593 broad.mit.edu 36 4 82229894 82229894 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006259 exon18 c.G2281T p.D761Y . . . PRKG2 5593 broad.mit.edu 36 4 82315101 82315101 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006259 exon2 c.T498C p.N166N . . . RASGEF1B 153020 broad.mit.edu 36 4 82597798 82597798 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152545 exon3 c.G179T p.R60I . . . SH3TC1 54436 broad.mit.edu 36 4 8286003 8286003 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018986 exon14 c.G3145A p.A1049T . . . GAK 2580 broad.mit.edu 36 4 834846 834846 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005255 exon26 c.G3535A p.D1179N . . . GAK 2580 broad.mit.edu 36 4 835593 835593 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005255 exon25 c.G3453A p.S1151S . . . THAP9 79725 broad.mit.edu 36 4 84058383 84058383 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024672 exon5 c.G1994A p.R665Q . . . HELQ 113510 broad.mit.edu 36 4 84566209 84566209 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133636 exon14 c.T2737G p.F913V . . . HELQ 113510 broad.mit.edu 36 4 84569836 84569836 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133636 exon12 c.C2383A p.L795I . . . FAM175A 84142 broad.mit.edu 36 4 84612423 84612423 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139076 exon4 c.G258T p.K86N . . . WDFY3 23001 broad.mit.edu 36 4 85819263 85819263 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon65 c.G9980T p.G3327V . . . WDFY3 23001 broad.mit.edu 36 4 85930024 85930024 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon22 c.G3548A p.R1183Q . . . ARHGAP24 83478 broad.mit.edu 36 4 86710772 86710772 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025616 exon2 c.G54T p.Q18H . . . PTPN13 5783 broad.mit.edu 36 4 87833824 87833824 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080684 exon6 c.C607T p.R203X . . . PTPN13 5783 broad.mit.edu 36 4 87939298 87939298 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080684 exon39 c.A5849G p.E1950G . . . PTPN13 5783 broad.mit.edu 36 4 87943942 87943942 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080684 exon40 c.C5989T p.P1997S . . . PTPN13 5783 broad.mit.edu 36 4 87948003 87948003 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080684 exon42 c.C6439T p.R2147X . . . AFF1 4299 broad.mit.edu 36 4 88271319 88271319 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166693 exon17 c.G3025T p.G1009X . . . KLHL8 57563 broad.mit.edu 36 4 88325650 88325650 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020803 exon3 c.G542A p.R181Q . . . HSD17B13 345275 broad.mit.edu 36 4 88450436 88450436 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136230 exon5 c.C687A p.I229I . . . NUDT9 53343 broad.mit.edu 36 4 88598023 88598023 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198038 exon8 c.G729A p.E243E . . . IBSP 3381 broad.mit.edu 36 4 88951649 88951649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004967 exon7 c.G517A p.E173K . . . MEPE 56955 broad.mit.edu 36 4 88986389 88986389 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184697 exon6 c.A1006C p.N336H . . . PKD2 5311 broad.mit.edu 36 4 89186984 89186984 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000297 exon6 c.C1486T p.R496C . . . HERC6 55008 broad.mit.edu 36 4 89536299 89536299 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017912 exon6 c.C868T p.R290C . . . HERC6 55008 broad.mit.edu 36 4 89580091 89580091 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017912 exon21 c.C2597T p.S866F . . . FAM13A 10144 broad.mit.edu 36 4 90078316 90078316 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014883 exon5 c.T705C p.Y235Y . . . TIGD2 166815 broad.mit.edu 36 4 90254325 90254325 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145715 exon1 c.G1177T p.E393X . . . GPRIN3 285513 broad.mit.edu 36 4 90390170 90390170 + Missense_Mutation SNP G T T rs11734353 byCluster;byFrequency;byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198281 exon2 c.C115A p.L39I . . . MMRN1 22915 broad.mit.edu 36 4 91075115 91075115 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007351 exon6 c.G1261A p.E421K . . . GRID2 2895 broad.mit.edu 36 4 93444904 93444904 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001510 exon1 c.C74T p.S25L . . . ATOH1 474 broad.mit.edu 36 4 94969574 94969574 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005172 exon1 c.G474A p.K158K . . . SMARCAD1 56916 broad.mit.edu 36 4 95348596 95348596 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128429 exon2 c.C28T p.R10C . . . PDLIM5 10611 broad.mit.edu 36 4 95727237 95727237 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011515 exon9 c.G686A p.R229H . . . BMPR1B 658 broad.mit.edu 36 4 96255913 96255913 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001203 exon6 c.G301A p.E101K . . . BMPR1B 658 broad.mit.edu 36 4 96288932 96288932 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001203 exon11 c.G1087T p.E363X . . . BMPR1B 658 broad.mit.edu 36 4 96289011 96289011 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001203 exon11 c.G1166T p.R389I . . . UNC5C 8633 broad.mit.edu 36 4 96343012 96343012 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003728 exon12 c.G2029T p.A677S . . . PDHA2 5161 broad.mit.edu 36 4 96981222 96981222 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005390 exon1 c.C898T p.R300C . . . PDHA2 5161 broad.mit.edu 36 4 96981351 96981351 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005390 exon1 c.G1027T p.E343X . . . ST8SIA4 7903 broad.mit.edu 36 5 100259332 100259332 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175052 exon2 c.G170A p.R57Q . . . SLCO4C1 353189 broad.mit.edu 36 5 101613338 101613338 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_180991 exon9 c.C1523T p.S508L . . . SLCO6A1 133482 broad.mit.edu 36 5 101763194 101763194 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173488 exon10 c.G1778T p.G593V . . . PAM 5066 broad.mit.edu 36 5 102323480 102323480 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138822 exon12 c.G908A p.G303D . . . PPIP5K2 23262 broad.mit.edu 36 5 102546912 102546912 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015216 exon24 c.C3001T p.R1001C . . . C5orf30 90355 broad.mit.edu 36 5 102639529 102639529 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033211 exon3 c.G10A p.D4N . . . FER 2241 broad.mit.edu 36 5 108231438 108231438 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005246 exon6 c.T553C p.Y185H . . . STARD4 134429 broad.mit.edu 36 5 110863662 110863662 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139164 exon6 c.C439T p.R147X . . . EPB41L4A 64097 broad.mit.edu 36 5 111628547 111628547 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022140 exon6 c.C499T p.P167S . . . CTNND2 1501 broad.mit.edu 36 5 11170571 11170571 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001332 exon13 c.C2268T p.I756I . . . APC 324 broad.mit.edu 36 5 112203032 112203032 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.C3788A p.S1263X APC,large_intestine,NS,Substitution - Nonsense,0 . . APC 324 broad.mit.edu 36 5 112203412 112203412 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.G4168T p.E1390X APC,large_intestine,colon,Substitution - Nonsense,0 . . APC 324 broad.mit.edu 36 5 112205765 112205765 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.A6521C p.K2174T . . . MCC 4163 broad.mit.edu 36 5 112465517 112465517 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085377 exon8 c.C1216T p.L406F . . . MCC 4163 broad.mit.edu 36 5 112704287 112704287 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085377 exon3 c.C455A p.S152Y . . . MCC 4163 broad.mit.edu 36 5 112748616 112748616 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085377 exon2 c.G363T p.K121N . . . YTHDC2 64848 broad.mit.edu 36 5 112929505 112929505 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022828 exon21 c.G2732A p.R911Q . . . CCDC112 153733 broad.mit.edu 36 5 114634814 114634814 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040440 exon7 c.G1327A p.E443K . . . AQPEP 206338 broad.mit.edu 36 5 115374400 115374400 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173800 exon14 c.A2157C p.E719D . . . FAM170A 340069 broad.mit.edu 36 5 118996437 118996437 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182761 exon2 c.G166A p.E56K . . . PRR16 51334 broad.mit.edu 36 5 120049667 120049667 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016644 exon3 c.G210A p.E70E . . . CEP120 153241 broad.mit.edu 36 5 122710130 122710130 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166226 exon20 c.A2865C p.K955N . . . PHAX 51808 broad.mit.edu 36 5 125988252 125988252 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032177 exon5 c.G1002T p.M334I . . . SLC12A2 6558 broad.mit.edu 36 5 127548065 127548065 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001046 exon25 c.T3408C p.D1136D . . . FBN2 2201 broad.mit.edu 36 5 127732873 127732873 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001999 exon16 c.C2149T p.R717C . . . ADAMTS19 171019 broad.mit.edu 36 5 128960243 128960243 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133638 exon8 c.G1447T p.E483X . . . ADAMTS19 171019 broad.mit.edu 36 5 129100723 129100723 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133638 exon23 c.G3537T p.K1179N . . . SLC22A4 6583 broad.mit.edu 36 5 131685792 131685792 + Silent SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003059 exon4 c.C669G p.G223G . . . RAD50 10111 broad.mit.edu 36 5 131952380 131952380 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005732 exon8 c.G1154A p.R385H . . . KIF3A 11127 broad.mit.edu 36 5 132074569 132074569 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007054 exon9 c.G1209T p.E403D . . . TCF7 6932 broad.mit.edu 36 5 133505884 133505884 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003202 exon6 c.G745A p.D249N . . . CDKL3 51265 broad.mit.edu 36 5 133671820 133671820 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113575 exon9 c.C1272T p.C424C . . . CDKL3 51265 broad.mit.edu 36 5 133672036 133672036 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113575 exon9 c.G1056A p.K352K . . . UBE2B 7320 broad.mit.edu 36 5 133753909 133753909 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003337 exon6 c.C425T p.S142L . . . TXNDC15 79770 broad.mit.edu 36 5 134263219 134263219 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024715 exon5 c.G1028A p.R343Q . . . FBXL21 26223 broad.mit.edu 36 5 135304872 135304872 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012159 exon8 c.C918T p.F306F . . . PKD2L2 27039 broad.mit.edu 36 5 137289512 137289512 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014386 exon12 c.G1666A p.E556K . . . WNT8A 7478 broad.mit.edu 36 5 137452570 137452570 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058244 exon5 c.G423A p.R141R . . . BRD8 10902 broad.mit.edu 36 5 137514557 137514557 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139199 exon22 c.G2896A p.E966K . . . BRD8 10902 broad.mit.edu 36 5 137527911 137527911 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006696 exon14 c.T2041C p.S681P . . . KIF20A 10112 broad.mit.edu 36 5 137546769 137546769 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005733 exon8 c.G845A p.R282Q . . . CDC23 8697 broad.mit.edu 36 5 137555904 137555904 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004661 exon11 c.G1239T p.K413N . . . KDM3B 51780 broad.mit.edu 36 5 137789157 137789157 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016604 exon17 c.C4398T p.F1466F . . . CTNNA1 1495 broad.mit.edu 36 5 138267991 138267991 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001903 exon10 c.C1351T p.R451X . . . DNAH5 1767 broad.mit.edu 36 5 13829640 13829640 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon55 c.A9281C p.K3094T . . . MATR3 9782 broad.mit.edu 36 5 138689039 138689039 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194955 exon13 c.C2160T p.I720I . . . SLC23A1 9963 broad.mit.edu 36 5 138735699 138735699 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005847 exon14 c.C1692T p.I564I . . . DNAJC18 202052 broad.mit.edu 36 5 138777770 138777770 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152686 exon8 c.T1043G p.L348R . . . DNAJC18 202052 broad.mit.edu 36 5 138788651 138788651 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152686 exon5 c.G611A p.R204Q . . . DNAH5 1767 broad.mit.edu 36 5 13917713 13917713 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001369 exon28 c.G4389A p.W1463X . . . PSD2 84249 broad.mit.edu 36 5 139202219 139202219 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032289 exon15 c.G2292T p.K764N . . . DNAH5 1767 broad.mit.edu 36 5 13929860 13929860 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon22 c.T3329C p.V1110A . . . DNAH5 1767 broad.mit.edu 36 5 13947780 13947780 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001369 exon16 c.G2410T p.E804X . . . C5orf53 492311 broad.mit.edu 36 5 139488273 139488273 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007189 exon1 c.C28T p.R10C . . . ANKHD1-EIF4EBP3 404734 broad.mit.edu 36 5 139888774 139888774 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017747 exon29 c.C6059A p.S2020Y . . . IK 3550 broad.mit.edu 36 5 140012832 140012832 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006083 exon5 c.A323C p.D108A . . . HARS 3035 broad.mit.edu 36 5 140036641 140036641 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002109 exon10 c.C976T p.R326X . . . HARS 3035 broad.mit.edu 36 5 140042952 140042952 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002109 exon3 c.C217T p.R73C . . . PCDHA1 56147 broad.mit.edu 36 5 140146509 140146509 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031410 exon1 c.G450A p.S150S . . . PCDHA3 56145 broad.mit.edu 36 5 140161529 140161529 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031497 exon1 c.A563C p.E188A . . . PCDHA3 56145 broad.mit.edu 36 5 140161762 140161762 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031497 exon1 c.G796A p.A266T . . . PCDHA4 56144 broad.mit.edu 36 5 140167522 140167522 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_031500 exon1 c.T566C p.V189A . . . PCDHA4 56144 broad.mit.edu 36 5 140167907 140167907 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031500 exon1 c.A951C p.E317D . . . PCDHA4 56144 broad.mit.edu 36 5 140168826 140168826 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031500 exon1 c.G1870A p.V624M . . . PCDHA4 56144 broad.mit.edu 36 5 140169327 140169327 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031500 exon1 c.G2371T p.E791X . . . PCDHA6 56142 broad.mit.edu 36 5 140190229 140190229 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018909 exon1 c.A2369C p.D790A . . . PCDHA8 56140 broad.mit.edu 36 5 140201296 140201296 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031856 exon1 c.A206C p.K69T . . . PCDHA8 56140 broad.mit.edu 36 5 140201817 140201817 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031856 exon1 c.G727A p.E243K . . . PCDHA8 56140 broad.mit.edu 36 5 140201980 140201980 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031856 exon1 c.G890A p.R297Q . . . PCDHA10 56139 broad.mit.edu 36 5 140216689 140216689 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031860 exon1 c.A872C p.K291T . . . PCDHA11 56138 broad.mit.edu 36 5 140229254 140229254 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031861 exon1 c.G382A p.D128N . . . PCDHA13 56136 broad.mit.edu 36 5 140243118 140243118 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031865 exon1 c.G1081T p.E361X . . . PCDHAC2 56134 broad.mit.edu 36 5 140328322 140328322 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018899 exon1 c.G1787A p.R596Q . . . PCDHB3 56132 broad.mit.edu 36 5 140461801 140461801 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018937 exon1 c.G1384A p.E462K . . . PCDHB5 26167 broad.mit.edu 36 5 140496899 140496899 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015669 exon1 c.G1699A p.G567S . . . PCDHB6 56130 broad.mit.edu 36 5 140511364 140511364 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018939 exon1 c.G1342A p.A448T . . . PCDHB7 56129 broad.mit.edu 36 5 140533792 140533792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018940 exon1 c.G1192A p.E398K . . . PCDHB8 56128 broad.mit.edu 36 5 140538574 140538574 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_019120 exon1 c.A775C p.S259R . . . PCDHB10 56126 broad.mit.edu 36 5 140552438 140552438 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018930 exon1 c.C129T p.S43S . . . PCDHB12 56124 broad.mit.edu 36 5 140569508 140569508 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018932 exon1 c.C845T p.S282F . . . PCDHB13 56123 broad.mit.edu 36 5 140575499 140575499 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018933 exon1 c.G1620A p.A540A . . . PCDHB13 56123 broad.mit.edu 36 5 140576003 140576003 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018933 exon1 c.C2124T p.F708F . . . PCDHB14 56122 broad.mit.edu 36 5 140583834 140583834 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018934 exon1 c.C573T p.Y191Y . . . PCDHB15 56121 broad.mit.edu 36 5 140606655 140606655 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018935 exon1 c.C1325T p.S442L . . . PCDHGA1 56114 broad.mit.edu 36 5 140691988 140691988 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031993 exon1 c.G1553A p.R518Q . . . PCDHGA1 56114 broad.mit.edu 36 5 140692082 140692082 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031993 exon1 c.C1647T p.S549S . . . PCDHGA2 56113 broad.mit.edu 36 5 140701162 140701162 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032009 exon1 c.A2440G p.T814A . . . PCDHGB1 56104 broad.mit.edu 36 5 140710627 140710627 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018922 exon1 c.C616T p.R206C . . . PCDHGA4 56111 broad.mit.edu 36 5 140715838 140715838 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018917 exon1 c.C887A p.S296Y . . . PCDHGA5 56110 broad.mit.edu 36 5 140724947 140724947 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032054 exon1 c.C866T p.S289L . . . PCDHGB3 56102 broad.mit.edu 36 5 140730527 140730527 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018924 exon1 c.G382A p.D128N . . . PCDHGA7 56108 broad.mit.edu 36 5 140743452 140743452 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032087 exon1 c.G802A p.D268N . . . PCDHGA8 9708 broad.mit.edu 36 5 140753595 140753595 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032088 exon1 c.G1031A p.R344K . . . PCDHGB5 56101 broad.mit.edu 36 5 140759143 140759143 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032099 exon1 c.A1265G p.D422G . . . PCDHGB5 56101 broad.mit.edu 36 5 140759832 140759832 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032099 exon1 c.G1954A p.A652T . . . PCDHGB6 56100 broad.mit.edu 36 5 140768608 140768608 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018926 exon1 c.G655A p.D219N . . . PCDHGB6 56100 broad.mit.edu 36 5 140769067 140769067 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018926 exon1 c.C1114T p.R372W . . . PCDHGB7 56099 broad.mit.edu 36 5 140777876 140777876 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032101 exon1 c.G266A p.R89Q . . . PCDHGB7 56099 broad.mit.edu 36 5 140779600 140779600 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032101 exon1 c.T1990C p.F664L . . . PCDHGA11 56105 broad.mit.edu 36 5 140782323 140782323 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018914 exon1 c.A1345G p.N449D . . . PCDHGC4 56098 broad.mit.edu 36 5 140847073 140847073 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032406 exon1 c.C2149T p.R717C . . . PCDHGC4 56098 broad.mit.edu 36 5 140847265 140847265 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032406 exon1 c.C2341T p.R781W . . . FCHSD1 89848 broad.mit.edu 36 5 141004621 141004621 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033449 exon15 c.G1513A p.E505K . . . ARAP3 64411 broad.mit.edu 36 5 141030334 141030334 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022481 exon14 c.A2036G p.Y679C . . . RNF14 9604 broad.mit.edu 36 5 141343130 141343130 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183401 exon7 c.G1065T p.E355D . . . FGF1 2246 broad.mit.edu 36 5 141955209 141955209 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000800 exon4 c.T298C p.F100L . . . ARHGAP26 23092 broad.mit.edu 36 5 142373849 142373849 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015071 exon12 c.G1119A p.S373S . . . NR3C1 2908 broad.mit.edu 36 5 142759933 142759933 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018074 exon2 c.A665C p.N222T . . . NR3C1 2908 broad.mit.edu 36 5 142760097 142760097 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018074 exon2 c.G501A p.Q167Q . . . NR3C1 2908 broad.mit.edu 36 5 142760595 142760595 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001018074 exon2 c.G3T p.M1I . . . GRXCR2 643226 broad.mit.edu 36 5 145226424 145226424 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080516 exon2 c.C397T p.R133X . . . LARS 51520 broad.mit.edu 36 5 145483745 145483745 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020117 exon29 c.C3089T p.S1030L . . . TRIO 7204 broad.mit.edu 36 5 14561111 14561111 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007118 exon57 c.C8874T p.F2958F . . . POU4F3 5459 broad.mit.edu 36 5 145700110 145700110 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002700 exon2 c.G927T p.E309D . . . SPINK14 408187 broad.mit.edu 36 5 147529499 147529499 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001325 exon1 c.C11A p.S4Y . . . FBXO38 81545 broad.mit.edu 36 5 147775711 147775711 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205836 exon11 c.A1292G p.D431G . . . FBXO38 81545 broad.mit.edu 36 5 147786995 147786995 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_205836 exon15 c.C1945T p.R649X . . . SLC26A2 1836 broad.mit.edu 36 5 149341293 149341293 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000112 exon3 c.T1944G p.T648T . . . ZNF300 91975 broad.mit.edu 36 5 150256053 150256053 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172831 exon7 c.T989C p.V330A . . . FAT2 2196 broad.mit.edu 36 5 150905617 150905617 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon9 c.C5264A p.A1755D . . . FAT2 2196 broad.mit.edu 36 5 150926941 150926941 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon1 c.C1745T p.S582L . . . FAT2 2196 broad.mit.edu 36 5 150928062 150928062 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon1 c.G624T p.K208N . . . G3BP1 10146 broad.mit.edu 36 5 151150089 151150089 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005754 exon3 c.G108T p.K36N . . . LPCAT1 79888 broad.mit.edu 36 5 1516913 1516913 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024830 exon14 c.C1458T p.F486F . . . LARP1 23367 broad.mit.edu 36 5 154171103 154171103 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015315 exon17 c.G2716A p.E906K . . . GEMIN5 25929 broad.mit.edu 36 5 154248114 154248114 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015465 exon28 c.A4376G p.D1459G . . . KIF4B 285643 broad.mit.edu 36 5 154374248 154374248 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099293 exon1 c.T636C p.S212S . . . KIF4B 285643 broad.mit.edu 36 5 154377255 154377255 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001099293 exon1 c.G3643A p.A1215T . . . TIMD4 91937 broad.mit.edu 36 5 156309307 156309307 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138379 exon4 c.C693T p.V231V . . . FAM71B 153745 broad.mit.edu 36 5 156522379 156522379 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130899 exon2 c.G1475A p.R492Q . . . FAM71B 153745 broad.mit.edu 36 5 156522622 156522622 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130899 exon2 c.G1232A p.R411Q . . . ITK 3702 broad.mit.edu 36 5 156540638 156540638 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005546 exon1 c.G72A p.S24S . . . ITK 3702 broad.mit.edu 36 5 156582541 156582541 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005546 exon6 c.G586A p.E196K . . . FABP6 2172 broad.mit.edu 36 5 159589163 159589163 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130958 exon4 c.C168T p.F56F . . . SLU7 10569 broad.mit.edu 36 5 159774752 159774752 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006425 exon2 c.G128A p.R43Q . . . FBXL7 23194 broad.mit.edu 36 5 15990016 15990016 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012304 exon4 c.G1197T p.K399N . . . ATP10B 23120 broad.mit.edu 36 5 159929119 159929119 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025153 exon25 c.C3900T p.L1300L . . . GABRA6 2559 broad.mit.edu 36 5 161051661 161051661 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000811 exon8 c.C963T p.F321F . . . HMMR 3161 broad.mit.edu 36 5 162835076 162835076 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012485 exon10 c.C1040T p.S347F . . . MYO10 4651 broad.mit.edu 36 5 16721425 16721425 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012334 exon40 c.C6036T p.I2012I . . . ODZ2 57451 broad.mit.edu 36 5 167563313 167563313 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001122679 exon18 c.C3445A p.L1149I . . . ODZ2 57451 broad.mit.edu 36 5 167607137 167607137 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122679 exon27 c.C6588T p.Y2196Y . . . SLIT3 6586 broad.mit.edu 36 5 168045339 168045339 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003062 exon31 c.C3486T p.F1162F . . . SLIT3 6586 broad.mit.edu 36 5 168133842 168133842 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003062 exon13 c.C1271T p.A424V . . . CCDC99 54908 broad.mit.edu 36 5 168960973 168960973 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017785 exon11 c.G1436A p.R479Q . . . DOCK2 1794 broad.mit.edu 36 5 169378595 169378595 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004946 exon33 c.A3286G p.T1096A . . . C5orf41 153222 broad.mit.edu 36 5 172446153 172446153 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168393 exon3 c.G53A p.R18Q . . . HMP19 51617 broad.mit.edu 36 5 173463938 173463938 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015980 exon4 c.C315T p.F105F . . . DRD1 1812 broad.mit.edu 36 5 174802589 174802589 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000794 exon2 c.G120T p.G40G . . . TSPAN17 26262 broad.mit.edu 36 5 176011232 176011232 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006616 exon2 c.G97A p.A33T . . . NSD1 64324 broad.mit.edu 36 5 176563839 176563839 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon4 c.C1176T p.F392F . . . NSD1 64324 broad.mit.edu 36 5 176570189 176570189 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon5 c.T2183C p.V728A . . . N4BP3 23138 broad.mit.edu 36 5 177480095 177480095 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015111 exon3 c.A641C p.H214P . . . ZNF354A 6940 broad.mit.edu 36 5 178072180 178072180 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005649 exon5 c.G1305T p.E435D . . . ZNF354A 6940 broad.mit.edu 36 5 178072797 178072797 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005649 exon5 c.C688T p.R230C . . . ZNF354B 117608 broad.mit.edu 36 5 178242338 178242338 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058230 exon5 c.G279T p.M93I . . . ZFP2 80108 broad.mit.edu 36 5 178291656 178291656 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030613 exon5 c.G736T p.E246X . . . ZNF354C 30832 broad.mit.edu 36 5 178439369 178439369 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014594 exon5 c.G1330T p.E444X . . . MAML1 9794 broad.mit.edu 36 5 179134362 179134362 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014757 exon5 c.C2929T p.Q977X . . . OR2Y1 134083 broad.mit.edu 36 5 180099432 180099432 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001657 exon1 c.T233C p.V78A . . . CDH18 1016 broad.mit.edu 36 5 19607628 19607628 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004934 exon8 c.G1070A p.R357H . . . CDH18 1016 broad.mit.edu 36 5 19782814 19782814 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004934 exon4 c.G517T p.D173Y . . . CDH18 1016 broad.mit.edu 36 5 19782897 19782897 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004934 exon4 c.T434G p.F145C . . . CDH12 1010 broad.mit.edu 36 5 21878148 21878148 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004061 exon8 c.A693G p.E231E . . . CDH10 1008 broad.mit.edu 36 5 24528734 24528734 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006727 exon10 c.T1573G p.F525V . . . CDH10 1008 broad.mit.edu 36 5 24545643 24545643 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006727 exon7 c.G1045A p.E349K . . . CDH9 1007 broad.mit.edu 36 5 27024050 27024050 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016279 exon2 c.C148T p.R50C . . . SDHA 6389 broad.mit.edu 36 5 281384 281384 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004168 exon6 c.G706A p.A236T . . . DROSHA 29102 broad.mit.edu 36 5 31460329 31460329 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon27 c.C3223T p.R1075C . . . DROSHA 29102 broad.mit.edu 36 5 31465361 31465361 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon26 c.G3194C p.G1065A . . . DROSHA 29102 broad.mit.edu 36 5 31487411 31487411 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon20 c.C2668T p.R890C . . . PDZD2 23037 broad.mit.edu 36 5 32019430 32019430 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178140 exon2 c.A889G p.T297A . . . NPR3 4883 broad.mit.edu 36 5 32748062 32748062 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000908 exon1 c.G423A p.A141A . . . TARS 6897 broad.mit.edu 36 5 33502811 33502811 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152295 exon18 c.C1987T p.R663X . . . ADAMTS12 81792 broad.mit.edu 36 5 33563167 33563167 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_030955 exon24 c.G4668T p.K1556N . . . ADAMTS12 81792 broad.mit.edu 36 5 33585216 33585216 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030955 exon21 c.G4155T p.K1385N . . . ADAMTS12 81792 broad.mit.edu 36 5 33612994 33612994 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030955 exon19 c.G2894A p.R965Q . . . ADAMTS12 81792 broad.mit.edu 36 5 33719732 33719732 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030955 exon4 c.A820G p.I274V . . . RAI14 26064 broad.mit.edu 36 5 34860118 34860118 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145522 exon14 c.C2327T p.S776L . . . TTC23L 153657 broad.mit.edu 36 5 34902815 34902815 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144725 exon7 c.G724A p.D242N . . . PRLR 5618 broad.mit.edu 36 5 35101270 35101270 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000949 exon10 c.A1547G p.N516S . . . SPEF2 79925 broad.mit.edu 36 5 35685247 35685247 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024867 exon6 c.G754A p.E252K . . . SPEF2 79925 broad.mit.edu 36 5 35812134 35812134 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024867 exon29 c.G4097A p.R1366Q . . . IL7R 3575 broad.mit.edu 36 5 35903180 35903180 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002185 exon3 c.G237T p.E79D . . . CAPSL 133690 broad.mit.edu 36 5 35946370 35946370 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144647 exon3 c.G170A p.R57Q . . . RANBP3L 202151 broad.mit.edu 36 5 36289574 36289574 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145000 exon12 c.A1099C p.N367H . . . NIPBL 25836 broad.mit.edu 36 5 37099866 37099866 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015384 exon46 c.C8078T p.S2693L . . . C5orf42 65250 broad.mit.edu 36 5 37204892 37204892 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023073 exon34 c.G6991A p.D2331N . . . LIFR 3977 broad.mit.edu 36 5 38526058 38526058 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127671 exon15 c.G2158T p.E720X . . . LIFR 3977 broad.mit.edu 36 5 38541884 38541884 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127671 exon9 c.G1171A p.E391K . . . LIFR 3977 broad.mit.edu 36 5 38546332 38546332 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127671 exon7 c.T982G p.F328V . . . OSMR 9180 broad.mit.edu 36 5 38968733 38968733 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003999 exon18 c.G2370T p.E790D . . . RICTOR 253260 broad.mit.edu 36 5 39017757 39017757 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152756 exon8 c.G722A p.R241Q . . . DAB2 1601 broad.mit.edu 36 5 39419011 39419011 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001343 exon10 c.G807A p.T269T . . . C7 730 broad.mit.edu 36 5 41000615 41000615 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000587 exon14 c.T1765C p.F589L . . . HEATR7B2 133558 broad.mit.edu 36 5 41051256 41051256 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173489 exon29 c.C2966A p.S989Y . . . C6 729 broad.mit.edu 36 5 41212521 41212521 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000065 exon8 c.G981A p.T327T . . . C6 729 broad.mit.edu 36 5 41231688 41231688 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000065 exon5 c.T550C p.Y184H . . . OXCT1 5019 broad.mit.edu 36 5 41798026 41798026 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000436 exon14 c.G1282T p.D428Y . . . C5orf34 375444 broad.mit.edu 36 5 43544498 43544498 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198566 exon3 c.C223T p.R75X . . . EMB 133418 broad.mit.edu 36 5 49731462 49731462 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198449 exon8 c.G954A p.R318R . . . EMB 133418 broad.mit.edu 36 5 49737320 49737320 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198449 exon5 c.T596C p.V199A . . . PARP8 79668 broad.mit.edu 36 5 50152870 50152870 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178055 exon17 c.G1735A p.E579K . . . EXOC3 11336 broad.mit.edu 36 5 507128 507128 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007277 exon4 c.C1008T p.I336I . . . ADAMTS16 170690 broad.mit.edu 36 5 5239219 5239219 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139056 exon5 c.C818A p.S273Y . . . FST 10468 broad.mit.edu 36 5 52815854 52815854 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013409 exon4 c.G695A p.G232E . . . GZMA 3001 broad.mit.edu 36 5 54437152 54437152 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006144 exon2 c.C164A p.A55D . . . SKIV2L2 23517 broad.mit.edu 36 5 54674978 54674978 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015360 exon8 c.C844A p.L282I . . . SKIV2L2 23517 broad.mit.edu 36 5 54709935 54709935 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015360 exon17 c.T1847C p.V616A . . . GPBP1 65056 broad.mit.edu 36 5 56582606 56582606 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_022913 exon10 c.C1041T p.F347F . . . IPO11 51194 broad.mit.edu 36 5 61808313 61808313 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134779 exon9 c.G924T p.K308N . . . HTR1A 3350 broad.mit.edu 36 5 63292061 63292061 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000524 exon1 c.C1242A p.I414I . . . RNF180 285671 broad.mit.edu 36 5 63545478 63545478 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178532 exon4 c.A569G p.Y190C . . . RGS7BP 401190 broad.mit.edu 36 5 63907396 63907396 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029875 exon3 c.T372G p.L124L . . . RGS7BP 401190 broad.mit.edu 36 5 63907481 63907481 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029875 exon3 c.C457T p.R153X . . . CWC27 10283 broad.mit.edu 36 5 64115449 64115449 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005869 exon4 c.C283T p.R95W . . . CWC27 10283 broad.mit.edu 36 5 64303377 64303377 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005869 exon12 c.A1134G p.G378G . . . CENPK 64105 broad.mit.edu 36 5 64860780 64860780 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022145 exon7 c.C291T p.F97F . . . SGTB 54557 broad.mit.edu 36 5 65001889 65001889 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019072 exon11 c.G855A p.E285E . . . SGTB 54557 broad.mit.edu 36 5 65052337 65052337 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019072 exon2 c.A54C p.Q18H . . . ERBB2IP 55914 broad.mit.edu 36 5 65386507 65386507 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018695 exon21 c.G3605A p.R1202Q . . . MAST4 375449 broad.mit.edu 36 5 66463462 66463462 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015183 exon15 c.T1453G p.F485V . . . MAP1B 4131 broad.mit.edu 36 5 71526994 71526994 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.A2056C p.K686Q . . . MAP1B 4131 broad.mit.edu 36 5 71528415 71528415 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.C3477T p.F1159F . . . MAP1B 4131 broad.mit.edu 36 5 71530710 71530710 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.G5772A p.E1924E . . . MAP1B 4131 broad.mit.edu 36 5 71531814 71531814 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.G6876T p.K2292N . . . UTP15 84135 broad.mit.edu 36 5 72900047 72900047 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032175 exon4 c.C230A p.S77Y . . . GCNT4 51301 broad.mit.edu 36 5 74361060 74361060 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016591 exon1 c.T559G p.F187V . . . COL4A3BP 10087 broad.mit.edu 36 5 74790740 74790740 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130105 exon4 c.G638A p.R213Q . . . IQGAP2 10788 broad.mit.edu 36 5 75932477 75932477 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006633 exon11 c.G1156A p.D386N . . . IQGAP2 10788 broad.mit.edu 36 5 75984355 75984355 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006633 exon18 c.C2119T p.R707W . . . WDR41 55255 broad.mit.edu 36 5 76821065 76821065 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018268 exon2 c.G140A p.R47Q . . . LHFPL2 10184 broad.mit.edu 36 5 77820540 77820540 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005779 exon5 c.C623G p.A208G . . . PAPD4 167153 broad.mit.edu 36 5 78972485 78972485 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114394 exon5 c.T521C p.L174S . . . CMYA5 202333 broad.mit.edu 36 5 79061512 79061512 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon2 c.T1168C p.F390L . . . CMYA5 202333 broad.mit.edu 36 5 79063775 79063775 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon2 c.C3431A p.S1144X . . . CMYA5 202333 broad.mit.edu 36 5 79120552 79120552 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon10 c.C11558A p.S3853Y . . . THBS4 7060 broad.mit.edu 36 5 79391060 79391060 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003248 exon6 c.C774T p.C258C . . . ZFYVE16 9765 broad.mit.edu 36 5 79765785 79765785 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105251 exon3 c.G63T p.Q21H . . . ZFYVE16 9765 broad.mit.edu 36 5 79788043 79788043 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105251 exon13 c.G3698A p.R1233Q . . . RASGRF2 5924 broad.mit.edu 36 5 80418423 80418423 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006909 exon9 c.G1285T p.E429X . . . RASGRF2 5924 broad.mit.edu 36 5 80539969 80539969 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006909 exon22 c.G3112A p.E1038K . . . ACOT12 134526 broad.mit.edu 36 5 80677503 80677503 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130767 exon7 c.C730T p.R244C . . . SSBP2 23635 broad.mit.edu 36 5 80981901 80981901 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012446 exon2 c.G76A p.V26I . . . VCAN 1462 broad.mit.edu 36 5 82871431 82871431 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164097 exon7 c.C3892A p.P1298T . . . VCAN 1462 broad.mit.edu 36 5 82873199 82873199 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164097 exon7 c.C5660T p.A1887V . . . HAPLN1 1404 broad.mit.edu 36 5 82984054 82984054 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001884 exon3 c.C446T p.T149I . . . GPR98 84059 broad.mit.edu 36 5 89979272 89979272 + De_novo_Start_OutOfFrame SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon17 c.T3224G p.F1075C . . . GPR98 84059 broad.mit.edu 36 5 90114889 90114889 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon66 c.A13424G p.D4475G . . . GPR98 84059 broad.mit.edu 36 5 90317064 90317064 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon85 c.T18121C p.S6041P . . . C5orf36 285600 broad.mit.edu 36 5 93882174 93882174 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145678 exon5 c.C505T p.R169X . . . MCTP1 79772 broad.mit.edu 36 5 94068979 94068979 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002796 exon23 c.G2315A p.R772K . . . MCTP1 79772 broad.mit.edu 36 5 94076240 94076240 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002796 exon20 c.G2055T p.K685N . . . FAM81B 153643 broad.mit.edu 36 5 94809908 94809908 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152548 exon9 c.G1209A p.Q403Q . . . TTC37 9652 broad.mit.edu 36 5 94902832 94902832 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014639 exon7 c.A335C p.K112T . . . RIOK2 55781 broad.mit.edu 36 5 96539294 96539294 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018343 exon3 c.C220T p.R74W . . . ASCC3 10973 broad.mit.edu 36 6 101064581 101064581 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006828 exon41 c.C6409T p.R2137X . . . ASCC3 10973 broad.mit.edu 36 6 101198628 101198628 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006828 exon23 c.A3732C p.Q1244H . . . GRIK2 2898 broad.mit.edu 36 6 101953943 101953943 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021956 exon1 c.A69G p.L23L . . . GRIK2 2898 broad.mit.edu 36 6 102231298 102231298 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021956 exon4 c.G649A p.E217K . . . GRIK2 2898 broad.mit.edu 36 6 102444329 102444329 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021956 exon11 c.A1646G p.N549S . . . HACE1 57531 broad.mit.edu 36 6 105331883 105331883 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020771 exon15 c.T1569G p.P523P . . . PRDM1 639 broad.mit.edu 36 6 106642953 106642953 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198 exon2 c.C227T p.S76L . . . AIM1 202 broad.mit.edu 36 6 107081969 107081969 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001624 exon5 c.T3285G p.I1095M . . . GCNT2 2651 broad.mit.edu 36 6 10729661 10729661 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145655 exon2 c.C1017T p.H339H . . . LACE1 246269 broad.mit.edu 36 6 108950232 108950232 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145315 exon13 c.G1357A p.E453K . . . MAK 4117 broad.mit.edu 36 6 10899895 10899895 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005906 exon9 c.C1315T p.R439W . . . ARMC2 84071 broad.mit.edu 36 6 109381123 109381123 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032131 exon13 c.G1791A p.P597P . . . CEP57L1 285753 broad.mit.edu 36 6 109588510 109588510 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173830 exon10 c.T1059G p.S353R . . . PPIL6 285755 broad.mit.edu 36 6 109864072 109864072 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001111298 exon2 c.C159T p.S53S . . . ZBTB24 9841 broad.mit.edu 36 6 109893912 109893912 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014797 exon7 c.A1929C p.E643D . . . ZBTB24 9841 broad.mit.edu 36 6 109894022 109894022 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014797 exon7 c.C1819A p.L607I . . . ZBTB24 9841 broad.mit.edu 36 6 109894365 109894365 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014797 exon7 c.C1476T p.C492C . . . AKD1 221264 broad.mit.edu 36 6 110069500 110069500 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145128 exon10 c.C847T p.R283X . . . RPF2 84154 broad.mit.edu 36 6 111453313 111453313 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032194 exon10 c.A756C p.K252N . . . REV3L 5980 broad.mit.edu 36 6 111771864 111771864 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002912 exon21 c.C7495T p.R2499X . . . REV3L 5980 broad.mit.edu 36 6 111795816 111795816 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002912 exon14 c.C5868T p.F1956F . . . REV3L 5980 broad.mit.edu 36 6 111800633 111800633 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002912 exon13 c.G5618A p.R1873Q . . . LAMA4 3910 broad.mit.edu 36 6 112567685 112567685 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105207 exon23 c.C3051A p.I1017I . . . LAMA4 3910 broad.mit.edu 36 6 112593099 112593099 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001105207 exon13 c.A1603G p.T535A . . . LAMA4 3910 broad.mit.edu 36 6 112644283 112644283 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105207 exon3 c.G276A p.L92L . . . FRK 2444 broad.mit.edu 36 6 116488157 116488157 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002031 exon1 c.T11C p.I4T . . . TSPYL4 23270 broad.mit.edu 36 6 116680679 116680679 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021648 exon1 c.C1186T p.R396X . . . TSPYL4 23270 broad.mit.edu 36 6 116681140 116681140 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021648 exon1 c.G725A p.R242H . . . RWDD1 51389 broad.mit.edu 36 6 117016805 117016805 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007464 exon5 c.G90T p.K30N . . . ZUFSP 221302 broad.mit.edu 36 6 117094721 117094721 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145062 exon2 c.G328T p.D110Y . . . KPNA5 3841 broad.mit.edu 36 6 117117216 117117216 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002269 exon2 c.A45C p.K15N . . . KPNA5 3841 broad.mit.edu 36 6 117129954 117129954 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002269 exon6 c.T515C p.V172A . . . ROS1 6098 broad.mit.edu 36 6 117790599 117790599 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon21 c.A3241C p.K1081Q . . . ROS1 6098 broad.mit.edu 36 6 117793476 117793476 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon19 c.T2934C p.G978G . . . ROS1 6098 broad.mit.edu 36 6 117793572 117793572 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon19 c.T2838C p.V946V . . . ROS1 6098 broad.mit.edu 36 6 117813670 117813670 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon15 c.G2173A p.D725N . . . GOPC 57120 broad.mit.edu 36 6 118003075 118003075 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020399 exon4 c.C608T p.A203V . . . C6orf204 387119 broad.mit.edu 36 6 118909672 118909672 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178035 exon9 c.A1717C p.K573Q . . . ASF1A 25842 broad.mit.edu 36 6 119263680 119263680 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014034 exon1 c.G53A p.R18Q . . . HIVEP1 3096 broad.mit.edu 36 6 12229431 12229431 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002114 exon4 c.T1417G p.L473V . . . HIVEP1 3096 broad.mit.edu 36 6 12232178 12232178 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002114 exon4 c.C4164T p.F1388F HIVEP1,central_nervous_system,brain,Substitution - Missense,0 . . HSF2 3298 broad.mit.edu 36 6 122776402 122776402 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004506 exon4 c.C364T p.R122C . . . TRMT11 60487 broad.mit.edu 36 6 126361436 126361436 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031712 exon6 c.G435A p.P145P . . . C6orf174 387104 broad.mit.edu 36 6 127839046 127839046 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012279 exon6 c.C1818T p.V606V . . . THEMIS 387357 broad.mit.edu 36 6 128176461 128176461 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010923 exon4 c.G1018A p.G340S . . . PTPRK 5796 broad.mit.edu 36 6 128339773 128339773 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002844 exon26 c.C3831T p.V1277V . . . PTPRK 5796 broad.mit.edu 36 6 128346106 128346106 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002844 exon23 c.C3361T p.R1121W . . . LAMA2 3908 broad.mit.edu 36 6 129517351 129517351 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon8 c.T1036C p.C346R . . . LAMA2 3908 broad.mit.edu 36 6 129854899 129854899 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon56 c.C8047A p.L2683I . . . LAMA2 3908 broad.mit.edu 36 6 129868071 129868071 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon60 c.C8569A p.L2857I . . . ENPP3 5169 broad.mit.edu 36 6 132000287 132000287 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005021 exon1 c.G70A p.A24T . . . ENPP3 5169 broad.mit.edu 36 6 132045951 132045951 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005021 exon12 c.G1076A p.R359Q . . . ENPP1 5167 broad.mit.edu 36 6 132232283 132232283 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006208 exon13 c.C1366T p.R456X . . . ENPP1 5167 broad.mit.edu 36 6 132247831 132247831 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006208 exon23 c.C2379T p.V793V . . . ENPP1 5167 broad.mit.edu 36 6 132253277 132253277 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006208 exon25 c.G2711T p.R904I . . . MOXD1 26002 broad.mit.edu 36 6 132691270 132691270 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015529 exon5 c.T820G p.F274V . . . STX7 8417 broad.mit.edu 36 6 132838479 132838479 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003569 exon3 c.G101T p.R34I . . . TAAR9 134860 broad.mit.edu 36 6 132901488 132901488 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175057 exon1 c.T367G p.L123V . . . TAAR6 319100 broad.mit.edu 36 6 132933837 132933837 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175067 exon1 c.G684A p.A228A . . . TAAR5 9038 broad.mit.edu 36 6 132951926 132951926 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003967 exon1 c.A593C p.K198T . . . TAAR5 9038 broad.mit.edu 36 6 132952512 132952512 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003967 exon1 c.G7A p.A3T . . . VNN2 8875 broad.mit.edu 36 6 133114244 133114244 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004665 exon5 c.G933A p.S311S . . . VNN2 8875 broad.mit.edu 36 6 133120518 133120518 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004665 exon1 c.G198A p.K66K . . . EYA4 2070 broad.mit.edu 36 6 133831479 133831479 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172103 exon10 c.C818T p.S273L . . . TBPL1 9519 broad.mit.edu 36 6 134345460 134345460 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004865 exon3 c.T197G p.I66S . . . SGK1 6446 broad.mit.edu 36 6 134680256 134680256 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143676 exon1 c.G36T p.K12N . . . HBS1L 10767 broad.mit.edu 36 6 135350557 135350557 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145158 exon8 c.A1023G p.G341G . . . HBS1L 10767 broad.mit.edu 36 6 135365646 135365646 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145158 exon4 c.G332A p.R111Q . . . C6orf114 85411 broad.mit.edu 36 6 13578305 13578305 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033069 exon2 c.G187A p.E63K . . . PDE7B 27115 broad.mit.edu 36 6 136310304 136310304 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018945 exon2 c.G31A p.E11K . . . BCLAF1 9774 broad.mit.edu 36 6 136639263 136639263 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014739 exon5 c.G1093T p.G365X . . . MAP3K5 4217 broad.mit.edu 36 6 136955113 136955113 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005923 exon23 c.C3116A p.S1039Y . . . SIRT5 23408 broad.mit.edu 36 6 13720057 13720057 + Missense_Mutation SNP A C C rs34162626 byCluster;byFrequency;by1000genomes TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001193267 exon9 c.A860C p.E287A . . . IL20RA 53832 broad.mit.edu 36 6 137364815 137364815 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014432 exon7 c.C1235T p.A412V . . . REPS1 85021 broad.mit.edu 36 6 139267914 139267914 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031922 exon20 c.C2368T p.R790X . . . UTRN 7402 broad.mit.edu 36 6 144896022 144896022 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007124 exon42 c.G6166T p.E2056X . . . SHPRH 257218 broad.mit.edu 36 6 146317557 146317557 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173082 exon2 c.A595C p.K199Q . . . GRM1 2911 broad.mit.edu 36 6 146393027 146393027 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114329 exon2 c.C681A p.V227V . . . SASH1 23328 broad.mit.edu 36 6 148888151 148888151 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015278 exon11 c.C1241T p.T414M . . . TAB2 23118 broad.mit.edu 36 6 149772513 149772513 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015093 exon9 c.C2047T p.R683C . . . LATS1 9113 broad.mit.edu 36 6 150024781 150024781 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004690 exon8 c.T3170C p.V1057A . . . LATS1 9113 broad.mit.edu 36 6 150043066 150043066 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004690 exon5 c.G2231A p.R744Q . . . LATS1 9113 broad.mit.edu 36 6 150045995 150045995 + Missense_Mutation SNP G T T rs35163691 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004690 exon4 c.C1923A p.F641L . . . ULBP2 80328 broad.mit.edu 36 6 150309318 150309318 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025217 exon3 c.G467T p.R156I . . . IYD 389434 broad.mit.edu 36 6 150731975 150731975 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164695 exon1 c.G115A p.E39K . . . MTHFD1L 25902 broad.mit.edu 36 6 151307384 151307384 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015440 exon14 c.G1510T p.D504Y . . . C6orf211 79624 broad.mit.edu 36 6 151831641 151831641 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024573 exon5 c.T1029A p.C343X . . . C6orf97 80129 broad.mit.edu 36 6 151978491 151978491 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025059 exon10 c.A1931C p.E644A . . . ESR1 2099 broad.mit.edu 36 6 152307007 152307007 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001122740 exon5 c.G767A p.R256Q . . . SYNE1 23345 broad.mit.edu 36 6 152511044 152511044 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon52 c.C8377T p.R2793W . . . SYNE1 23345 broad.mit.edu 36 6 152542996 152542996 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon44 c.C7000A p.L2334I . . . SYNE1 23345 broad.mit.edu 36 6 152673563 152673563 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon3 c.C421T p.R141X . . . SYNE1 23345 broad.mit.edu 36 6 152673689 152673689 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon3 c.G295T p.E99X . . . SYNE1 23345 broad.mit.edu 36 6 152693605 152693605 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033071 exon77 c.C13695T p.V4565V . . . SYNE1 23345 broad.mit.edu 36 6 152694567 152694567 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon77 c.G12733T p.E4245X . . . SYNE1 23345 broad.mit.edu 36 6 152710003 152710003 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon72 c.G11749A p.D3917N . . . SYNE1 23345 broad.mit.edu 36 6 152748611 152748611 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon55 c.C8564T p.A2855V . . . SYNE1 23345 broad.mit.edu 36 6 152772035 152772035 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon44 c.A6422C p.K2141T . . . SYNE1 23345 broad.mit.edu 36 6 152782535 152782535 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon40 c.G5304C p.Q1768H . . . SYNE1 23345 broad.mit.edu 36 6 152810317 152810317 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon29 c.C3659T p.S1220F . . . SYNE1 23345 broad.mit.edu 36 6 152813926 152813926 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon26 c.G3156T p.E1052D . . . SYNE1 23345 broad.mit.edu 36 6 152821698 152821698 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon22 c.G2476A p.E826K . . . RBM16 22828 broad.mit.edu 36 6 155157934 155157934 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014892 exon6 c.C575T p.A192V . . . RBM16 22828 broad.mit.edu 36 6 155196057 155196057 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014892 exon20 c.A3652C p.N1218H . . . TIAM2 26230 broad.mit.edu 36 6 155615779 155615779 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012454 exon23 c.G4125A p.S1375S . . . NOX3 50508 broad.mit.edu 36 6 155759772 155759772 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015718 exon13 c.T1597C p.F533L . . . NOX3 50508 broad.mit.edu 36 6 155817932 155817932 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015718 exon2 c.T72G p.F24L . . . TULP4 56995 broad.mit.edu 36 6 158820900 158820900 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007466 exon7 c.G1156A p.A386T . . . TAGAP 117289 broad.mit.edu 36 6 159377665 159377665 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054114 exon10 c.T1378G p.F460V . . . FNDC1 84624 broad.mit.edu 36 6 159564556 159564556 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032532 exon7 c.G775A p.E259K . . . SOD2 6648 broad.mit.edu 36 6 160029262 160029262 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000636 exon3 c.G229A p.D77N . . . IGF2R 3482 broad.mit.edu 36 6 160387585 160387585 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000876 exon15 c.T1969G p.Y657D . . . IGF2R 3482 broad.mit.edu 36 6 160400083 160400083 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000876 exon22 c.C3054A p.F1018L . . . LPA 4018 broad.mit.edu 36 6 160930675 160930675 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005577 exon25 c.C3847T p.R1283X . . . LPA 4018 broad.mit.edu 36 6 160947549 160947549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005577 exon18 c.C2735T p.A912V . . . PLG 5340 broad.mit.edu 36 6 161054072 161054072 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000301 exon5 c.G472A p.D158N . . . GMPR 2766 broad.mit.edu 36 6 16362903 16362903 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006877 exon4 c.C423T p.F141F . . . GMPR 2766 broad.mit.edu 36 6 16403385 16403385 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006877 exon9 c.G1027A p.V343M . . . SFT2D1 113402 broad.mit.edu 36 6 166663656 166663656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145169 exon2 c.G133A p.V45I . . . RPS6KA2 6196 broad.mit.edu 36 6 166756886 166756886 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021135 exon17 c.C1591T p.R531X . . . RPS6KA2 6196 broad.mit.edu 36 6 166793019 166793019 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021135 exon12 c.G983A p.R328Q . . . FGFR1OP 11116 broad.mit.edu 36 6 167355976 167355976 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194429 exon7 c.A609G p.E203E . . . SMOC2 64094 broad.mit.edu 36 6 168653608 168653608 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001166412 exon2 c.C249T p.N83N . . . C6orf70 55780 broad.mit.edu 36 6 169918084 169918084 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018341 exon15 c.G1518A p.E506E . . . KIF13A 63971 broad.mit.edu 36 6 17889001 17889001 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022113 exon31 c.A3785G p.H1262R . . . KIF13A 63971 broad.mit.edu 36 6 17934278 17934278 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022113 exon15 c.G1589A p.R530Q . . . DEK 7913 broad.mit.edu 36 6 18364038 18364038 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003472 exon6 c.G476A p.S159N . . . MBOAT1 154141 broad.mit.edu 36 6 20226712 20226712 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080480 exon9 c.G946A p.G316R . . . PRL 5617 broad.mit.edu 36 6 22402617 22402617 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000948 exon2 c.C204T p.F68F . . . ALDH5A1 7915 broad.mit.edu 36 6 24610738 24610738 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170740 exon2 c.T363G p.S121R . . . TDP2 51567 broad.mit.edu 36 6 24766921 24766921 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016614 exon3 c.A272C p.E91A . . . LRRC16A 55604 broad.mit.edu 36 6 25708594 25708594 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017640 exon33 c.C3193T p.R1065W . . . SCGN 10590 broad.mit.edu 36 6 25761618 25761618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006998 exon2 c.G112A p.D38N . . . SCGN 10590 broad.mit.edu 36 6 25777725 25777725 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006998 exon5 c.G344A p.R115H . . . SCGN 10590 broad.mit.edu 36 6 25809452 25809452 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006998 exon11 c.G741T p.E247D . . . SLC17A3 10786 broad.mit.edu 36 6 25957603 25957603 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098486 exon11 c.T1340C p.V447A . . . SLC17A2 10246 broad.mit.edu 36 6 26024041 26024041 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005835 exon9 c.C965T p.A322V . . . SLC17A2 10246 broad.mit.edu 36 6 26025037 26025037 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005835 exon8 c.G785A p.R262Q . . . BTN3A3 10384 broad.mit.edu 36 6 26554018 26554018 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006994 exon5 c.G541A p.D181N . . . BTN1A1 696 broad.mit.edu 36 6 26613143 26613143 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001732 exon3 c.G439A p.D147N . . . ABT1 29777 broad.mit.edu 36 6 26706171 26706171 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013375 exon2 c.A292C p.K98Q . . . FKSG83 83954 broad.mit.edu 36 6 27401356 27401356 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032030 exon1 c.A316G p.T106A . . . ZNF184 7738 broad.mit.edu 36 6 27528063 27528063 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007149 exon6 c.C1254T p.Y418Y . . . ZNF184 7738 broad.mit.edu 36 6 27528171 27528171 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007149 exon6 c.A1146C p.K382N . . . ZNF165 7718 broad.mit.edu 36 6 28164944 28164944 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003447 exon4 c.G1175A p.R392Q . . . PGBD1 84547 broad.mit.edu 36 6 28361383 28361383 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184743 exon3 c.G473A p.S158N . . . SERPINB9 5272 broad.mit.edu 36 6 2841377 2841377 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004155 exon3 c.C215T p.S72L . . . SCAND3 114821 broad.mit.edu 36 6 28651815 28651815 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052923 exon3 c.G646T p.E216X . . . OR2W1 26692 broad.mit.edu 36 6 29120402 29120402 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030903 exon1 c.T530G p.F177C . . . OR2W1 26692 broad.mit.edu 36 6 29120602 29120602 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030903 exon1 c.T330C p.V110V . . . OR12D2 26529 broad.mit.edu 36 6 29472480 29472480 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013936 exon1 c.G25A p.E9K . . . OR2H1 26716 broad.mit.edu 36 6 29537986 29537986 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030883 exon3 c.C461T p.S154L . . . MOG 4340 broad.mit.edu 36 6 29735408 29735408 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008229 exon2 c.A422C p.E141A . . . TRIM10 10107 broad.mit.edu 36 6 30234344 30234344 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006778 exon3 c.C567T p.F189F . . . TRIM26 7726 broad.mit.edu 36 6 30272350 30272350 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003449 exon6 c.C687T p.V229V . . . ABCF1 23 broad.mit.edu 36 6 30661347 30661347 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025091 exon16 c.C1509T p.I503I . . . DHX16 8449 broad.mit.edu 36 6 30746200 30746200 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003587 exon4 c.G632A p.R211H . . . MDC1 9656 broad.mit.edu 36 6 30783757 30783757 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014641 exon8 c.G2578T p.E860X . . . PSORS1C2 170680 broad.mit.edu 36 6 31213988 31213988 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014069 exon2 c.C130T p.P44S . . . CCHCR1 54535 broad.mit.edu 36 6 31226866 31226866 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105563 exon5 c.A706G p.T236A . . . ATP6V1G2 534 broad.mit.edu 36 6 31621906 31621906 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138282 exon2 c.C19T p.R7C . . . C2 717 broad.mit.edu 36 6 32009992 32009992 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145903 exon4 c.G390A p.S130S . . . STK19 8859 broad.mit.edu 36 6 32056529 32056529 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004197 exon7 c.G1021A p.D341N . . . TNXB 7148 broad.mit.edu 36 6 32125203 32125203 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019105 exon28 c.C9573T p.F3191F . . . TNXB 7148 broad.mit.edu 36 6 32164735 32164735 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019105 exon6 c.C2584T p.R862C . . . C6orf10 10665 broad.mit.edu 36 6 32415392 32415392 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006781 exon10 c.T351C p.G117G . . . C6orf10 10665 broad.mit.edu 36 6 32425537 32425537 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006781 exon9 c.C307A p.L103I . . . TAP1 6890 broad.mit.edu 36 6 32926191 32926191 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000593 exon5 c.C1312T p.R438X . . . HLA-DMA 3108 broad.mit.edu 36 6 33026397 33026397 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006120 exon2 c.G250A p.E84K . . . VPS52 6293 broad.mit.edu 36 6 33342329 33342329 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022553 exon12 c.A1264G p.T422A . . . VPS52 6293 broad.mit.edu 36 6 33344842 33344842 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022553 exon6 c.C475T p.R159X . . . ITPR3 3710 broad.mit.edu 36 6 33753271 33753271 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002224 exon28 c.C3535T p.L1179L . . . UHRF1BP1 54887 broad.mit.edu 36 6 34939916 34939916 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017754 exon15 c.T3375C p.S1125S . . . SCUBE3 222663 broad.mit.edu 36 6 35315590 35315590 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152753 exon8 c.A913C p.K305Q . . . SCUBE3 222663 broad.mit.edu 36 6 35318931 35318931 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152753 exon15 c.G1849A p.E617K . . . SRPK1 6732 broad.mit.edu 36 6 35911094 35911094 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003137 exon16 c.G1933A p.A645T . . . MAPK14 1432 broad.mit.edu 36 6 36148725 36148725 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001315 exon4 c.C403A p.L135I . . . C6orf222 389384 broad.mit.edu 36 6 36405964 36405964 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010903 exon2 c.A482G p.H161R . . . TMEM217 221468 broad.mit.edu 36 6 37294600 37294600 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145316 exon2 c.G185T p.C62F . . . MDGA1 266727 broad.mit.edu 36 6 37730631 37730631 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153487 exon5 c.A635G p.Y212C . . . ZFAND3 60685 broad.mit.edu 36 6 38192377 38192377 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021943 exon5 c.A413T p.E138V . . . DNAH8 1769 broad.mit.edu 36 6 38921363 38921363 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon34 c.C4230T p.I1410I . . . DNAH8 1769 broad.mit.edu 36 6 38928512 38928512 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon38 c.G4880A p.R1627H . . . DNAH8 1769 broad.mit.edu 36 6 38939745 38939745 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon43 c.G5778T p.K1926N . . . C6orf146 222826 broad.mit.edu 36 6 4014008 4014008 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173563 exon7 c.T1448C p.F483S . . . TREM1 54210 broad.mit.edu 36 6 41358134 41358134 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018643 exon2 c.G383A p.R128H . . . USP49 25862 broad.mit.edu 36 6 41881636 41881636 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018561 exon4 c.T1064C p.I355T . . . KIAA0240 23506 broad.mit.edu 36 6 42904576 42904576 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015349 exon5 c.C527T p.S176L . . . CUL9 23113 broad.mit.edu 36 6 43262132 43262132 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015089 exon4 c.C1212T p.G404G . . . ZNF318 24149 broad.mit.edu 36 6 43424329 43424329 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014345 exon6 c.G2783A p.R928H . . . MAD2L1BP 9587 broad.mit.edu 36 6 43712118 43712118 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003690 exon3 c.C165T p.S55S . . . TMEM63B 55362 broad.mit.edu 36 6 44230156 44230156 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018426 exon23 c.C2303A p.S768Y . . . SLC29A1 2030 broad.mit.edu 36 6 44305304 44305304 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001078174 exon4 c.T112C p.Y38H . . . ENPP4 22875 broad.mit.edu 36 6 46215576 46215576 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014936 exon2 c.G297T p.K99N . . . ENPP4 22875 broad.mit.edu 36 6 46215937 46215937 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014936 exon2 c.A658G p.R220G . . . ENPP5 59084 broad.mit.edu 36 6 46243741 46243741 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021572 exon2 c.A218G p.Y73C . . . TDRD6 221400 broad.mit.edu 36 6 46764830 46764830 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010870 exon1 c.C1006T p.R336W . . . TDRD6 221400 broad.mit.edu 36 6 46766267 46766267 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010870 exon1 c.C2443T p.P815S . . . TDRD6 221400 broad.mit.edu 36 6 46768355 46768355 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010870 exon1 c.C4531A p.L1511I . . . TDRD6 221400 broad.mit.edu 36 6 46768680 46768680 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010870 exon1 c.C4856T p.A1619V . . . TDRD6 221400 broad.mit.edu 36 6 46769255 46769255 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010870 exon1 c.T5431C p.Y1811H . . . PLA2G7 7941 broad.mit.edu 36 6 46786280 46786280 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168357 exon8 c.G738T p.K246N . . . GPR116 221395 broad.mit.edu 36 6 46934367 46934367 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098518 exon17 c.C3232T p.R1078C . . . GPR116 221395 broad.mit.edu 36 6 46934466 46934466 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098518 exon17 c.C3133T p.R1045W . . . GPR110 266977 broad.mit.edu 36 6 47085879 47085879 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153840 exon11 c.G1251A p.P417P . . . CD2AP 23607 broad.mit.edu 36 6 47652780 47652780 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012120 exon8 c.A885C p.I295I . . . C6orf138 442213 broad.mit.edu 36 6 47954774 47954774 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001013732 exon3 c.C1765T p.R589X . . . C6orf138 442213 broad.mit.edu 36 6 47955043 47955043 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013732 exon3 c.C1496T p.S499L . . . C6orf138 442213 broad.mit.edu 36 6 48084701 48084701 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207499 exon2 c.C535T p.L179F . . . CDYL 9425 broad.mit.edu 36 6 4880845 4880845 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143970 exon3 c.C393T p.D131D . . . CDYL 9425 broad.mit.edu 36 6 4888785 4888785 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143970 exon5 c.C732T p.F244F . . . RPP40 10799 broad.mit.edu 36 6 4940408 4940408 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006638 exon8 c.G995A p.R332Q . . . DEFB113 245927 broad.mit.edu 36 6 50044410 50044410 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037729 exon2 c.C188T p.A63V . . . DEFB113 245927 broad.mit.edu 36 6 50044483 50044483 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037729 exon2 c.C115T p.R39C . . . TFAP2B 7021 broad.mit.edu 36 6 50915949 50915949 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003221 exon6 c.G1062T p.K354N . . . EXOC2 55770 broad.mit.edu 36 6 509562 509562 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018303 exon15 c.C1650T p.H550H . . . PKHD1 5314 broad.mit.edu 36 6 51632712 51632712 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138694 exon61 c.G10171T p.E3391X . . . PKHD1 5314 broad.mit.edu 36 6 52008385 52008385 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon28 c.G3191T p.S1064I . . . PKHD1 5314 broad.mit.edu 36 6 52032738 52032738 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon15 c.G1180A p.A394T . . . PKHD1 5314 broad.mit.edu 36 6 52044917 52044917 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon8 c.A557C p.K186T . . . GSTA3 2940 broad.mit.edu 36 6 52869578 52869578 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000847 exon7 c.G654T p.K218N . . . GSTA3 2940 broad.mit.edu 36 6 52872768 52872768 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000847 exon5 c.C337T p.R113X . . . FARS2 10667 broad.mit.edu 36 6 5376350 5376350 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006567 exon4 c.G850T p.E284X . . . TINAG 27283 broad.mit.edu 36 6 54362583 54362583 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014464 exon11 c.G1332A p.E444E . . . HCRTR2 3062 broad.mit.edu 36 6 55253173 55253173 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001526 exon6 c.G1077A p.A359A . . . COL21A1 81578 broad.mit.edu 36 6 56141052 56141052 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030820 exon6 c.G1029A p.T343T . . . COL21A1 81578 broad.mit.edu 36 6 56143789 56143789 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030820 exon4 c.G737T p.R246I . . . COL21A1 81578 broad.mit.edu 36 6 56152870 56152870 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030820 exon3 c.G105A p.P35P . . . DST 667 broad.mit.edu 36 6 56462292 56462292 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon67 c.C12963T p.I4321I . . . DST 667 broad.mit.edu 36 6 56466910 56466910 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon64 c.G12382A p.E4128K . . . DST 667 broad.mit.edu 36 6 56525375 56525375 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon42 c.C8305T p.R2769X . . . DST 667 broad.mit.edu 36 6 56564968 56564968 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon30 c.A5005C p.N1669H . . . DST 667 broad.mit.edu 36 6 56613343 56613343 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon4 c.G436A p.E146K . . . ZNF451 26036 broad.mit.edu 36 6 57120189 57120189 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015555 exon10 c.G1347T p.M449I . . . RAB23 51715 broad.mit.edu 36 6 57183010 57183010 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016277 exon2 c.G128A p.G43E . . . PRIM2 5558 broad.mit.edu 36 6 57293230 57293230 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000947 exon3 c.A171C p.E57D . . . F13A1 2162 broad.mit.edu 36 6 6167357 6167357 + Missense_Mutation SNP G T T rs35516060 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000129 exon8 c.C1020A p.F340L . . . PHF3 23469 broad.mit.edu 36 6 64452144 64452144 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon3 c.T562C p.S188P . . . PHF3 23469 broad.mit.edu 36 6 64479672 64479672 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon15 c.G4229T p.R1410I . . . LY86 9450 broad.mit.edu 36 6 6571552 6571552 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004271 exon3 c.A251G p.D84G . . . EYS 346007 broad.mit.edu 36 6 66101600 66101600 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198283 exon10 c.G1760T p.R587I . . . BAI3 577 broad.mit.edu 36 6 70005766 70005766 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001704 exon20 c.T2741G p.L914R . . . BAI3 577 broad.mit.edu 36 6 70127764 70127764 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001704 exon29 c.A3878G p.D1293G . . . COL9A1 1297 broad.mit.edu 36 6 71007127 71007127 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001851 exon32 c.G2065T p.E689X . . . COL9A1 1297 broad.mit.edu 36 6 71060777 71060777 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001851 exon5 c.G510A p.S170S . . . COL9A1 1297 broad.mit.edu 36 6 71060934 71060934 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001851 exon5 c.G353A p.R118Q . . . OGFRL1 79627 broad.mit.edu 36 6 72068396 72068396 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024576 exon7 c.G1279A p.E427K . . . RIMS1 22999 broad.mit.edu 36 6 73057262 73057262 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014989 exon25 c.G3714A p.A1238A . . . KCNQ5 56479 broad.mit.edu 36 6 73808385 73808385 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160133 exon3 c.C495T p.F165F . . . KCNQ5 56479 broad.mit.edu 36 6 73808449 73808449 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160133 exon3 c.C559T p.R187X . . . CD109 135228 broad.mit.edu 36 6 74577569 74577569 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133493 exon28 c.G3680T p.R1227L . . . DSP 1832 broad.mit.edu 36 6 7507915 7507915 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008844 exon5 c.A629G p.D210G . . . COL12A1 1303 broad.mit.edu 36 6 75896663 75896663 + Missense_Mutation SNP C T T rs34336755 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004370 exon37 c.G6074A p.R2025H . . . COL12A1 1303 broad.mit.edu 36 6 75949890 75949890 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004370 exon10 c.A1487G p.K496R . . . TMEM30A 55754 broad.mit.edu 36 6 76025339 76025339 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018247 exon6 c.T769G p.F257V . . . FILIP1 27145 broad.mit.edu 36 6 76129195 76129195 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015687 exon3 c.G435T p.E145D . . . SENP6 26054 broad.mit.edu 36 6 76462299 76462299 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015571 exon17 c.C2135A p.S712Y . . . MYO6 4646 broad.mit.edu 36 6 76653328 76653328 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004999 exon25 c.A2555C p.K852T . . . MYO6 4646 broad.mit.edu 36 6 76680598 76680598 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004999 exon34 c.G3538A p.D1180N . . . BMP6 654 broad.mit.edu 36 6 7824328 7824328 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001718 exon5 c.A1227C p.K409N . . . PHIP 55023 broad.mit.edu 36 6 79722063 79722063 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017934 exon33 c.T3838G p.L1280V . . . PHIP 55023 broad.mit.edu 36 6 79749349 79749349 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017934 exon23 c.A2742C p.K914N . . . PHIP 55023 broad.mit.edu 36 6 79783978 79783978 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017934 exon11 c.C1036T p.R346W . . . LCA5 167691 broad.mit.edu 36 6 80253898 80253898 + Missense_Mutation SNP C T T rs35415141 byCluster;byFrequency TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181714 exon9 c.G1636A p.A546T . . . DOPEY1 23033 broad.mit.edu 36 6 83905021 83905021 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015018 exon21 c.T4541G p.F1514C . . . PRSS35 167681 broad.mit.edu 36 6 84290582 84290582 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170423 exon3 c.A703C p.K235Q . . . CYB5R4 51167 broad.mit.edu 36 6 84685858 84685858 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016230 exon7 c.C530A p.S177Y . . . KIAA1009 22832 broad.mit.edu 36 6 84928291 84928291 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014895 exon20 c.C2569T p.R857C . . . ZNF292 23036 broad.mit.edu 36 6 88025492 88025492 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon8 c.C5426A p.S1809Y . . . RARS2 57038 broad.mit.edu 36 6 88297313 88297313 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020320 exon9 c.T679G p.F227V . . . RARS2 57038 broad.mit.edu 36 6 88312072 88312072 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020320 exon7 c.C516T p.G172G . . . ORC3 23595 broad.mit.edu 36 6 88382816 88382816 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012381 exon9 c.C939A p.I313I . . . GABRR1 2569 broad.mit.edu 36 6 89964587 89964587 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002042 exon5 c.G443A p.R148Q . . . MDN1 23195 broad.mit.edu 36 6 90410528 90410528 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014611 exon102 c.C16708T p.R5570X . . . MDN1 23195 broad.mit.edu 36 6 90411485 90411485 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014611 exon101 c.C16572A p.I5524I . . . MDN1 23195 broad.mit.edu 36 6 90466724 90466724 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon57 c.G8649T p.K2883N . . . MDN1 23195 broad.mit.edu 36 6 90481076 90481076 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon46 c.T6976G p.L2326V . . . MDN1 23195 broad.mit.edu 36 6 90560207 90560207 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon5 c.G850T p.E284X . . . CASP8AP2 9994 broad.mit.edu 36 6 90633590 90633590 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137667 exon8 c.G3860A p.R1287Q . . . GJA10 84694 broad.mit.edu 36 6 90661315 90661315 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032602 exon1 c.G407T p.R136M . . . EPHA7 2045 broad.mit.edu 36 6 94009878 94009878 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004440 exon17 c.G2984A p.G995D . . . EPHA7 2045 broad.mit.edu 36 6 94123406 94123406 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004440 exon5 c.G1074A p.G358G . . . EPHA7 2045 broad.mit.edu 36 6 94177409 94177409 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004440 exon3 c.A363G p.E121E . . . NDUFAF4 29078 broad.mit.edu 36 6 97445745 97445745 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014165 exon3 c.G484A p.E162K . . . KLHL32 114792 broad.mit.edu 36 6 97639804 97639804 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052904 exon6 c.G493A p.D165N . . . C6orf167 253714 broad.mit.edu 36 6 97801241 97801241 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198468 exon11 c.A1166C p.K389T . . . LPAL2 80350 broad.mit.edu 36 6 160833946 160833946 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZAN 7455 broad.mit.edu 36 7 100172906 100172906 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173059 exon6 c.G611A p.R204H . . . ZAN 7455 broad.mit.edu 36 7 100211234 100211234 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173059 exon33 c.G6034A p.A2012T . . . MUC17 140453 broad.mit.edu 36 7 100461695 100461695 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040105 exon3 c.C278T p.S93L . . . MUC17 140453 broad.mit.edu 36 7 100472861 100472861 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040105 exon3 c.T11444C p.L3815S . . . MUC17 140453 broad.mit.edu 36 7 100480584 100480584 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040105 exon7 c.G12822A p.E4274E . . . DNAJC2 27000 broad.mit.edu 36 7 102740318 102740318 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129887 exon15 c.C1641T p.V547V . . . RELN 5649 broad.mit.edu 36 7 102984816 102984816 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005045 exon38 c.C5641T p.L1881L . . . RELN 5649 broad.mit.edu 36 7 103021537 103021537 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005045 exon27 c.A3740G p.Y1247C . . . MLL5 55904 broad.mit.edu 36 7 104509382 104509382 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182931 exon13 c.A1260C p.E420D . . . MLL5 55904 broad.mit.edu 36 7 104534229 104534229 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182931 exon20 c.G2621A p.R874Q . . . PRKAR2B 5577 broad.mit.edu 36 7 106584672 106584672 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002736 exon9 c.C926T p.S309L . . . GPR22 2845 broad.mit.edu 36 7 106901815 106901815 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005295 exon3 c.A74G p.D25G . . . GPR22 2845 broad.mit.edu 36 7 106902462 106902462 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005295 exon3 c.C721T p.R241X . . . COG5 10466 broad.mit.edu 36 7 106985704 106985704 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161520 exon2 c.A280C p.K94Q . . . DUS4L 11062 broad.mit.edu 36 7 107004091 107004091 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181581 exon7 c.C524T p.A175V . . . SLC26A3 1811 broad.mit.edu 36 7 107215076 107215076 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000111 exon7 c.G850A p.D284N . . . LAMB1 3912 broad.mit.edu 36 7 107378909 107378909 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002291 exon24 c.G3389A p.R1130Q . . . LAMB4 22798 broad.mit.edu 36 7 107483493 107483493 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007356 exon25 c.C3575T p.A1192V . . . LAMB4 22798 broad.mit.edu 36 7 107485513 107485513 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007356 exon24 c.C3379T p.P1127S . . . PNPLA8 50640 broad.mit.edu 36 7 107900220 107900220 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015723 exon12 c.A2210G p.Y737C . . . DOCK4 9732 broad.mit.edu 36 7 111416340 111416340 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014705 exon6 c.C430T p.R144C . . . PPP1R3A 5506 broad.mit.edu 36 7 113345624 113345624 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002711 exon1 c.A664G p.N222D . . . MDFIC 29969 broad.mit.edu 36 7 114443021 114443021 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199072 exon5 c.C864T p.F288F . . . TFEC 22797 broad.mit.edu 36 7 115369288 115369288 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018058 exon6 c.G471T p.V157V . . . THSD7A 221981 broad.mit.edu 36 7 11547640 11547640 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015204 exon6 c.G1753A p.E585K . . . MET 4233 broad.mit.edu 36 7 116127057 116127057 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000245 exon2 c.T683G p.F228C . . . ING3 54556 broad.mit.edu 36 7 120395230 120395230 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019071 exon8 c.G563A p.R188Q . . . C7orf58 79974 broad.mit.edu 36 7 120491531 120491531 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024913 exon5 c.A544C p.N182H . . . C7orf58 79974 broad.mit.edu 36 7 120722857 120722857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024913 exon23 c.C2996T p.S999L . . . PTPRZ1 5803 broad.mit.edu 36 7 121439023 121439023 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002851 exon12 c.C2687A p.S896Y . . . RNF148 378925 broad.mit.edu 36 7 122129293 122129293 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198085 exon1 c.G748A p.E250K . . . IQUB 154865 broad.mit.edu 36 7 122930387 122930387 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178827 exon5 c.G714T p.Q238H . . . WASL 8976 broad.mit.edu 36 7 123122122 123122122 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003941 exon8 c.G709A p.D237N . . . GRM8 2918 broad.mit.edu 36 7 125961091 125961091 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127323 exon9 c.A1581G p.K527K . . . GRM8 2918 broad.mit.edu 36 7 126331928 126331928 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127323 exon4 c.G773T p.R258I . . . GRM8 2918 broad.mit.edu 36 7 126533856 126533856 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127323 exon3 c.G657A p.S219S . . . LRRC4 64101 broad.mit.edu 36 7 127457452 127457452 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022143 exon2 c.G478A p.E160K . . . CCDC136 64753 broad.mit.edu 36 7 128233093 128233093 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022742 exon7 c.C991T p.R331C . . . TSPAN33 340348 broad.mit.edu 36 7 128591633 128591633 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178562 exon5 c.T446G p.F149C . . . CPA1 1357 broad.mit.edu 36 7 129812391 129812391 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001868 exon8 c.A956C p.K319T . . . PLXNA4 91584 broad.mit.edu 36 7 131517473 131517473 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020911 exon17 c.G3175A p.A1059T . . . PLXNA4 91584 broad.mit.edu 36 7 131843040 131843040 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181775 exon3 c.C953T p.A318V . . . LRGUK 136332 broad.mit.edu 36 7 133509902 133509902 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144648 exon8 c.C994A p.L332I . . . CALD1 800 broad.mit.edu 36 7 134293514 134293514 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033157 exon11 c.C1304T p.S435L . . . C7orf49 78996 broad.mit.edu 36 7 134502081 134502081 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024033 exon4 c.C296T p.S99L . . . WDR91 29062 broad.mit.edu 36 7 134541322 134541322 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014149 exon5 c.G623A p.R208Q . . . CHRM2 1129 broad.mit.edu 36 7 136350307 136350307 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000739 exon4 c.G155A p.R52H . . . TRIM24 8805 broad.mit.edu 36 7 137839586 137839586 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003852 exon2 c.C376T p.R126C . . . ATP6V0A4 50617 broad.mit.edu 36 7 138095104 138095104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130840 exon7 c.G572A p.R191Q . . . TTC26 79989 broad.mit.edu 36 7 138496288 138496288 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144920 exon8 c.G772T p.E258X . . . ETV1 2115 broad.mit.edu 36 7 13915785 13915785 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163147 exon9 c.G868A p.D290N . . . ETV1 2115 broad.mit.edu 36 7 13945391 13945391 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163147 exon6 c.T241G p.F81V . . . ADCK2 90956 broad.mit.edu 36 7 140033301 140033301 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052853 exon5 c.A1348C p.N450H . . . SSBP1 6742 broad.mit.edu 36 7 141091769 141091769 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003143 exon6 c.C319T p.R107X . . . OR9A4 130075 broad.mit.edu 36 7 141265916 141265916 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001656 exon1 c.C772A p.L258I . . . TAS2R38 5726 broad.mit.edu 36 7 141319397 141319397 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176817 exon1 c.G562T p.D188Y . . . PRSS1 5644 broad.mit.edu 36 7 142139345 142139345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002769 exon3 c.G347A p.R116H . . . TRPV6 55503 broad.mit.edu 36 7 142283036 142283036 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018646 exon9 c.G1126A p.A376T . . . TRPV6 55503 broad.mit.edu 36 7 142284302 142284302 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018646 exon6 c.G743A p.G248E . . . TRPV6 55503 broad.mit.edu 36 7 142285646 142285646 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018646 exon3 c.G229A p.A77T . . . TRPV5 56302 broad.mit.edu 36 7 142321976 142321976 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019841 exon12 c.G1475A p.R492H . . . TRPV5 56302 broad.mit.edu 36 7 142337611 142337611 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_019841 exon2 c.C181A p.L61I . . . KEL 3792 broad.mit.edu 36 7 142365133 142365133 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000420 exon6 c.G575A p.R192Q . . . TAS2R39 259285 broad.mit.edu 36 7 142590956 142590956 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176881 exon1 c.C323T p.A108V . . . CLCN1 1180 broad.mit.edu 36 7 142739951 142739951 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000083 exon12 c.G1264A p.E422K . . . TAS2R60 338398 broad.mit.edu 36 7 142851214 142851214 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177437 exon1 c.G547A p.D183N . . . TAS2R41 259287 broad.mit.edu 36 7 142885739 142885739 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176883 exon1 c.G652A p.G218R . . . TAS2R41 259287 broad.mit.edu 36 7 142885959 142885959 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_176883 exon1 c.G872A p.R291Q . . . OR2A25 392138 broad.mit.edu 36 7 143402811 143402811 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004488 exon1 c.C566T p.A189V . . . OR2A1 346528 broad.mit.edu 36 7 143560542 143560542 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001802 exon1 c.G310A p.E104K . . . EZH2 2146 broad.mit.edu 36 7 148137118 148137118 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152998 exon18 c.G2041A p.E681K . . . ZNF425 155054 broad.mit.edu 36 7 148432888 148432888 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001661 exon4 c.C1008T p.D336D . . . LOC155060 155060 broad.mit.edu 36 7 148594944 148594944 + Silent SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001195220 exon3 c.C522G p.G174G . . . GIMAP8 155038 broad.mit.edu 36 7 149802089 149802089 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175571 exon4 c.G739T p.E247X . . . GIMAP8 155038 broad.mit.edu 36 7 149805532 149805532 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175571 exon5 c.G1729T p.D577Y . . . GIMAP5 55340 broad.mit.edu 36 7 150070524 150070524 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199577 exon6 c.C976T p.R326C . . . KCNH2 3757 broad.mit.edu 36 7 150280719 150280719 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172057 exon2 c.G264A p.S88S . . . GBX1 2636 broad.mit.edu 36 7 150476767 150476767 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098834 exon2 c.C934T p.R312X . . . GALNTL5 168391 broad.mit.edu 36 7 151330981 151330981 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145292 exon6 c.G908A p.R303Q . . . MLL3 58508 broad.mit.edu 36 7 151477024 151477024 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170606 exon52 c.C12921T p.I4307I . . . MLL3 58508 broad.mit.edu 36 7 151491226 151491226 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170606 exon43 c.G10369A p.D3457N . . . PAXIP1 22976 broad.mit.edu 36 7 154398881 154398881 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007349 exon6 c.G532A p.E178K . . . CNPY1 285888 broad.mit.edu 36 7 154994433 154994433 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103176 exon2 c.G61A p.A21T . . . UBE3C 9690 broad.mit.edu 36 7 156692986 156692986 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014671 exon12 c.G1552A p.E518K . . . NCAPG2 54892 broad.mit.edu 36 7 158178864 158178864 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017760 exon3 c.G165T p.K55N . . . SNX13 23161 broad.mit.edu 36 7 17802982 17802982 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015132 exon25 c.T2619G p.I873M . . . SNX13 23161 broad.mit.edu 36 7 17807755 17807755 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015132 exon22 c.C2279T p.S760L . . . HDAC9 9734 broad.mit.edu 36 7 18755231 18755231 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178423 exon14 c.G1979A p.R660Q . . . ITGB8 3696 broad.mit.edu 36 7 20407897 20407897 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002214 exon10 c.A1310C p.K437T . . . ABCB5 340273 broad.mit.edu 36 7 20653786 20653786 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163941 exon10 c.T1085C p.V362A . . . DNAH11 8701 broad.mit.edu 36 7 21578012 21578012 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003777 exon8 c.G1489T p.G497X . . . DNAH11 8701 broad.mit.edu 36 7 21607278 21607278 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon17 c.G3381A p.W1127X . . . DNAH11 8701 broad.mit.edu 36 7 21696987 21696987 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon35 c.C6026T p.S2009L . . . RAPGEF5 9771 broad.mit.edu 36 7 22226092 22226092 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012294 exon9 c.G455A p.R152Q . . . FAM126A 84668 broad.mit.edu 36 7 22951778 22951778 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032581 exon11 c.T1521C p.G507G . . . KLHL7 55975 broad.mit.edu 36 7 23172057 23172057 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031710 exon8 c.T1152G p.I384M . . . KLHL7 55975 broad.mit.edu 36 7 23180198 23180198 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031710 exon11 c.A1517G p.N506S . . . SKAP2 8935 broad.mit.edu 36 7 26733147 26733147 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003930 exon7 c.A473G p.K158R . . . HOXA5 3202 broad.mit.edu 36 7 27148078 27148078 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019102 exon2 c.A714G p.Q238Q . . . HOXA6 3203 broad.mit.edu 36 7 27153572 27153572 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024014 exon1 c.G322A p.E108K . . . PDE1C 5137 broad.mit.edu 36 7 32076443 32076443 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001191056 exon1 c.C88T p.R30W . . . PDE1C 5137 broad.mit.edu 36 7 32176050 32176050 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001191058 exon3 c.G180A p.G60G . . . FKBP9 11328 broad.mit.edu 36 7 33006308 33006308 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007270 exon8 c.G1283A p.G428E . . . BMPER 168667 broad.mit.edu 36 7 34092091 34092091 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133468 exon13 c.G1607A p.R536K . . . DPY19L1 23333 broad.mit.edu 36 7 34956003 34956003 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015283 exon14 c.C1134A p.F378L . . . DPY19L1 23333 broad.mit.edu 36 7 34960900 34960900 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015283 exon13 c.T1036C p.F346L . . . ANLN 54443 broad.mit.edu 36 7 36428003 36428003 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018685 exon13 c.G2176A p.E726K . . . SDK1 221935 broad.mit.edu 36 7 3645218 3645218 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152744 exon3 c.G515A p.R172Q . . . AMPH 273 broad.mit.edu 36 7 38400144 38400144 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139316 exon17 c.G1468T p.A490S . . . AMPH 273 broad.mit.edu 36 7 38469114 38469114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139316 exon10 c.C874T p.R292W . . . VPS41 27072 broad.mit.edu 36 7 38764537 38764537 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014396 exon18 c.C1492T p.R498W . . . INHBA 3624 broad.mit.edu 36 7 41696333 41696333 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002192 exon3 c.C721T p.R241W . . . C7orf25 79020 broad.mit.edu 36 7 42916942 42916942 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024054 exon2 c.G83T p.R28I . . . HECW1 23072 broad.mit.edu 36 7 43485849 43485849 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015052 exon17 c.G3215A p.R1072Q . . . MYL7 58498 broad.mit.edu 36 7 44147127 44147127 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021223 exon2 c.C75A p.V25V . . . CAMK2B 816 broad.mit.edu 36 7 44247866 44247867 + Missense_Mutation DNP AG TA TA novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172078 exon11 c.860_861TA . . . . ADCY1 107 broad.mit.edu 36 7 45598984 45598984 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021116 exon2 c.G741A p.R247R . . . TNS3 64759 broad.mit.edu 36 7 47352318 47352318 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_022748 exon18 c.G2443A p.V815I . . . PKD1L1 168507 broad.mit.edu 36 7 47798814 47798814 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138295 exon56 c.A8462G p.N2821S . . . SUN3 256979 broad.mit.edu 36 7 48034944 48034944 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152782 exon2 c.G117A p.A39A . . . UPP1 7378 broad.mit.edu 36 7 48113152 48113152 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181597 exon8 c.C594T p.S198S . . . PAPOLB 56903 broad.mit.edu 36 7 4867583 4867583 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020144 exon1 c.G385A p.D129N . . . PAPOLB 56903 broad.mit.edu 36 7 4867763 4867763 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020144 exon1 c.T205G p.L69V . . . POM121L12 285877 broad.mit.edu 36 7 53071667 53071667 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182595 exon1 c.C809T p.A270V . . . EGFR 1956 broad.mit.edu 36 7 55191053 55191053 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201282 exon8 c.G926A p.R309Q . . . EGFR 1956 broad.mit.edu 36 7 55191951 55191951 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_201282 exon10 c.C1139A p.S380Y . . . ZNF479 90827 broad.mit.edu 36 7 57192030 57192030 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033273 exon5 c.G1034T p.R345I . . . ZNF479 90827 broad.mit.edu 36 7 57192109 57192109 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033273 exon5 c.C955A p.H319N . . . ZNF479 90827 broad.mit.edu 36 7 57197693 57197693 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033273 exon4 c.G236T p.R79I . . . OCM 654231 broad.mit.edu 36 7 5887057 5887057 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001097622 exon1 c.C11T p.T4M . . . PMS2 5395 broad.mit.edu 36 7 5989028 5989028 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000535 exon12 c.C2127T p.F709F . . . C7orf70 84792 broad.mit.edu 36 7 6336630 6336630 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037163 exon2 c.C681A p.F227L . . . C7orf70 84792 broad.mit.edu 36 7 6337149 6337149 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037163 exon2 c.A162G p.G54G . . . ZNF107 51427 broad.mit.edu 36 7 63805898 63805898 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013746 exon5 c.A1781G p.N594S . . . ZNF107 51427 broad.mit.edu 36 7 63806202 63806202 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001013746 exon5 c.A2085G p.E695E . . . ZNF138 7697 broad.mit.edu 36 7 63929802 63929802 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006524 exon3 c.A669G p.K223K . . . ZNF273 10793 broad.mit.edu 36 7 64025521 64025521 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021148 exon4 c.C380A p.S127Y . . . GUSB 2990 broad.mit.edu 36 7 65070278 65070278 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000181 exon10 c.G1528A p.D510N . . . TYW1 55253 broad.mit.edu 36 7 66185957 66185957 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018264 exon11 c.T1380C p.F460F . . . AUTS2 26053 broad.mit.edu 36 7 69865908 69865908 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015570 exon7 c.G859T p.E287X . . . FKBP6 8468 broad.mit.edu 36 7 72393256 72393256 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003602 exon7 c.C832T p.R278X . . . BAZ1B 9031 broad.mit.edu 36 7 72495065 72495065 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032408 exon18 c.G4020A p.R1340R . . . BAZ1B 9031 broad.mit.edu 36 7 72541509 72541509 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032408 exon6 c.A842C p.K281T . . . HIP1 3092 broad.mit.edu 36 7 75024928 75024928 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005338 exon16 c.C1547T p.S516L . . . DTX2 113878 broad.mit.edu 36 7 75947923 75947923 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001102595 exon2 c.T161A p.F54Y . . . PION 54103 broad.mit.edu 36 7 76848567 76848567 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017439 exon8 c.A567G p.G189G . . . PTPN12 5782 broad.mit.edu 36 7 77106484 77106484 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001131009 exon17 c.G1904A p.R635Q . . . MAGI2 9863 broad.mit.edu 36 7 77811070 77811070 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012301 exon9 c.C1369T p.P457S . . . CACNA2D1 781 broad.mit.edu 36 7 81427078 81427078 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000722 exon37 c.C2970A p.I990I . . . PCLO 27445 broad.mit.edu 36 7 82225956 82225956 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033026 exon25 c.C15300A p.F5100L . . . PCLO 27445 broad.mit.edu 36 7 82227926 82227926 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon24 c.C15253T p.R5085X . . . PCLO 27445 broad.mit.edu 36 7 82433489 82433489 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon4 c.A3551C p.K1184T . . . PCLO 27445 broad.mit.edu 36 7 82601560 82601560 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon3 c.A3242C p.E1081A . . . SEMA3E 9723 broad.mit.edu 36 7 82863925 82863925 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012431 exon12 c.G1423T p.E475X . . . SEMA3A 10371 broad.mit.edu 36 7 83602053 83602053 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006080 exon2 c.T263G p.F88C . . . SEMA3A 10371 broad.mit.edu 36 7 83661790 83661790 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006080 exon1 c.A49G p.T17A . . . SEMA3D 223117 broad.mit.edu 36 7 84480040 84480040 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152754 exon15 c.G1762A p.E588K . . . SUN1 23353 broad.mit.edu 36 7 858779 858779 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130965 exon8 c.C859T p.R287X . . . GRM3 2913 broad.mit.edu 36 7 86306776 86306776 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000840 exon4 c.C2010T p.F670F . . . SUN1 23353 broad.mit.edu 36 7 864107 864107 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130965 exon13 c.C1511T p.A504V . . . SUN1 23353 broad.mit.edu 36 7 866347 866347 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130965 exon14 c.C1581T p.G527G . . . RUNDC3B 154661 broad.mit.edu 36 7 87245077 87245077 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134405 exon8 c.C826T p.R276X . . . RUNDC3B 154661 broad.mit.edu 36 7 87274746 87274746 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001134405 exon9 c.G1079A p.R360Q . . . SLC25A40 55972 broad.mit.edu 36 7 87317177 87317177 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018843 exon6 c.G287A p.R96Q . . . NXPH1 30010 broad.mit.edu 36 7 8757262 8757262 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152745 exon3 c.G154A p.D52N . . . ADAM22 53616 broad.mit.edu 36 7 87600193 87600193 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021722 exon12 c.C1068T p.G356G . . . ADAM22 53616 broad.mit.edu 36 7 87603245 87603245 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021722 exon14 c.G1183A p.E395K . . . STEAP4 79689 broad.mit.edu 36 7 87749935 87749935 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024636 exon3 c.G941A p.R314Q . . . MGC26647 219557 broad.mit.edu 36 7 88261862 88261862 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152706 exon2 c.C331A p.L111I . . . CLDN12 9069 broad.mit.edu 36 7 89879980 89879980 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012129 exon3 c.C54T p.I18I . . . CDK14 5218 broad.mit.edu 36 7 90422992 90422992 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012395 exon8 c.G817A p.E273K . . . FZD1 8321 broad.mit.edu 36 7 90733286 90733286 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003505 exon1 c.C1155T p.F385F . . . AKAP9 10142 broad.mit.edu 36 7 91468248 91468248 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon8 c.G1081T p.E361X . . . AKAP9 10142 broad.mit.edu 36 7 91479709 91479709 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon9 c.C3349T p.R1117C . . . AKAP9 10142 broad.mit.edu 36 7 91564458 91564458 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon41 c.C10225T p.R3409C . . . ANKIB1 54467 broad.mit.edu 36 7 91858473 91858473 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019004 exon16 c.C2110T p.R704C . . . C7orf64 84060 broad.mit.edu 36 7 91996140 91996140 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032120 exon1 c.A77C p.K26T . . . SAMD9L 219285 broad.mit.edu 36 7 92598990 92598990 + Nonsense_Mutation SNP G A A rs4729075 byHapMap TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152703 exon5 c.C4231T p.R1411X . . . CALCR 799 broad.mit.edu 36 7 92893835 92893835 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001742 exon14 c.C1194A p.V398V . . . PON3 5446 broad.mit.edu 36 7 94839497 94839497 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000940 exon4 c.A291G p.A97A . . . PDK4 5166 broad.mit.edu 36 7 95052903 95052903 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002612 exon11 c.G1222T p.E408X . . . DYNC1I1 1780 broad.mit.edu 36 7 95280520 95280520 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004411 exon4 c.G300A p.S100S . . . SLC25A13 10165 broad.mit.edu 36 7 95651659 95651659 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014251 exon11 c.C1043A p.P348H . . . SHFM1 7979 broad.mit.edu 36 7 96162083 96162083 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006304 exon2 c.G133A p.D45N . . . LMTK2 22853 broad.mit.edu 36 7 97654167 97654167 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014916 exon9 c.C919T p.R307X . . . LMTK2 22853 broad.mit.edu 36 7 97659251 97659251 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014916 exon11 c.C1538T p.S513L . . . ARPC1A 10552 broad.mit.edu 36 7 98779974 98779974 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190996 exon4 c.G250A p.A84T . . . CPSF4 10898 broad.mit.edu 36 7 98889553 98889553 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006693 exon7 c.C599T p.S200L . . . ZNF789 285989 broad.mit.edu 36 7 98922431 98922431 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213603 exon5 c.G662T p.R221I . . . ZNF789 285989 broad.mit.edu 36 7 98922613 98922613 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213603 exon5 c.G844T p.E282X . . . ZNF789 285989 broad.mit.edu 36 7 98922926 98922926 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213603 exon5 c.G1157A p.R386Q . . . CYP3A4 1576 broad.mit.edu 36 7 99197744 99197744 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017460 exon11 c.C1109T p.A370V . . . GJC3 349149 broad.mit.edu 36 7 99364616 99364616 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181538 exon1 c.G564A p.K188K . . . TAF6 6878 broad.mit.edu 36 7 99546854 99546854 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005641 exon10 c.G927T p.M309I . . . FAM183B 340286 broad.mit.edu 36 7 38692004 38692004 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VPS13B 157680 broad.mit.edu 36 8 100217105 100217105 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon11 c.G1531A p.A511T . . . VPS13B 157680 broad.mit.edu 36 8 100900927 100900927 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon48 c.C8733A p.F2911L . . . VPS13B 157680 broad.mit.edu 36 8 100902843 100902843 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon50 c.T9140C p.V3047A . . . RGS22 26166 broad.mit.edu 36 8 101083713 101083713 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015668 exon18 c.G2683T p.D895Y . . . RGS22 26166 broad.mit.edu 36 8 101085447 101085447 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015668 exon17 c.G2510A p.R837Q . . . FBXO43 286151 broad.mit.edu 36 8 101222597 101222597 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029860 exon2 c.C1061A p.S354Y . . . FBXO43 286151 broad.mit.edu 36 8 101223384 101223384 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029860 exon2 c.G274T p.E92X . . . ANKRD46 157567 broad.mit.edu 36 8 101611037 101611037 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198401 exon4 c.C201T p.F67F . . . NCALD 83988 broad.mit.edu 36 8 102770740 102770740 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040624 exon8 c.C555T p.C185C . . . KLF10 7071 broad.mit.edu 36 8 103732660 103732660 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032282 exon3 c.C1043T p.P348L . . . BAALC 79870 broad.mit.edu 36 8 104294362 104294362 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024812 exon2 c.G200A p.R67Q . . . BAALC 79870 broad.mit.edu 36 8 104309488 104309488 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024812 exon3 c.G423T p.K141N . . . FZD6 8323 broad.mit.edu 36 8 104411408 104411408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164615 exon6 c.G1891A p.E631K . . . CTHRC1 115908 broad.mit.edu 36 8 104457362 104457362 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138455 exon2 c.C371T p.A124V . . . CTHRC1 115908 broad.mit.edu 36 8 104463990 104463990 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138455 exon4 c.G718T p.E240X . . . RIMS2 9699 broad.mit.edu 36 8 105056772 105056772 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100117 exon16 c.G2789A p.R930Q . . . DPYS 1807 broad.mit.edu 36 8 105474376 105474376 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001385 exon8 c.C1255A p.H419N . . . DPYS 1807 broad.mit.edu 36 8 105528759 105528759 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001385 exon3 c.T572C p.V191A . . . LRP12 29967 broad.mit.edu 36 8 105572112 105572112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013437 exon7 c.G2545A p.E849K . . . C8orf74 203076 broad.mit.edu 36 8 10592854 10592854 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001040032 exon3 c.C577T p.R193W . . . SOX7 83595 broad.mit.edu 36 8 10620829 10620829 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031439 exon2 c.C996T p.F332F . . . ZFPM2 23414 broad.mit.edu 36 8 106884137 106884137 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012082 exon8 c.G2651A p.R884H . . . OXR1 55074 broad.mit.edu 36 8 107788290 107788290 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181354 exon7 c.G1344T p.E448D . . . OXR1 55074 broad.mit.edu 36 8 107792108 107792108 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181354 exon8 c.G1686A p.T562T . . . XKR6 286046 broad.mit.edu 36 8 10793631 10793631 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173683 exon3 c.C1167T p.F389F . . . TMEM74 157753 broad.mit.edu 36 8 109865719 109865719 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153015 exon2 c.G785A p.R262Q . . . TRHR 7201 broad.mit.edu 36 8 110169323 110169323 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003301 exon1 c.C406A p.L136I . . . TRHR 7201 broad.mit.edu 36 8 110169450 110169450 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003301 exon1 c.C533T p.S178F . . . NUDCD1 84955 broad.mit.edu 36 8 110377941 110377941 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032869 exon3 c.C307T p.R103X . . . PKHD1L1 93035 broad.mit.edu 36 8 110522129 110522129 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177531 exon33 c.C3971A p.S1324Y . . . PKHD1L1 93035 broad.mit.edu 36 8 110526842 110526842 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177531 exon38 c.C5568A p.F1856L . . . EBAG9 9166 broad.mit.edu 36 8 110636265 110636265 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198120 exon4 c.G294T p.M98I . . . EBAG9 9166 broad.mit.edu 36 8 110645881 110645881 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198120 exon7 c.G559A p.E187K . . . CSMD3 114788 broad.mit.edu 36 8 113737561 113737561 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon18 c.A3002C p.E1001A . . . TRPS1 7227 broad.mit.edu 36 8 116496314 116496314 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon7 c.C2998A p.H1000N . . . TRPS1 7227 broad.mit.edu 36 8 116668481 116668481 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon5 c.G2622T p.E874D . . . RAD21 5885 broad.mit.edu 36 8 117933387 117933387 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006265 exon11 c.A1451G p.D484G . . . EXT1 2131 broad.mit.edu 36 8 118888677 118888677 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000127 exon9 c.G1843A p.D615N . . . SAMD12 401474 broad.mit.edu 36 8 119662259 119662259 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001101676 exon2 c.G68T p.G23V . . . TNFRSF11B 4982 broad.mit.edu 36 8 120014529 120014529 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002546 exon2 c.G222A p.W74X . . . MTBP 27085 broad.mit.edu 36 8 121597549 121597549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022045 exon18 c.G2183A p.R728Q . . . SNTB1 6641 broad.mit.edu 36 8 121620305 121620305 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021021 exon7 c.T1610C p.V537A . . . HAS2 3037 broad.mit.edu 36 8 122695931 122695931 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005328 exon4 c.A1258C p.K420Q . . . WDR67 93594 broad.mit.edu 36 8 124165635 124165635 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145647 exon4 c.G393A p.S131S . . . ATAD2 29028 broad.mit.edu 36 8 124409671 124409671 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014109 exon25 c.T3808C p.C1270R . . . ATAD2 29028 broad.mit.edu 36 8 124452659 124452659 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014109 exon5 c.G637T p.E213X . . . KLHL38 340359 broad.mit.edu 36 8 124733190 124733190 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081675 exon1 c.C1158A p.F386L . . . FER1L6 654463 broad.mit.edu 36 8 125047648 125047648 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039112 exon5 c.G321A p.E107E . . . FER1L6 654463 broad.mit.edu 36 8 125163806 125163806 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039112 exon33 c.G4317T p.E1439D . . . FER1L6 654463 broad.mit.edu 36 8 125200344 125200344 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039112 exon40 c.C5368T p.P1790S . . . TRMT12 55039 broad.mit.edu 36 8 125533233 125533233 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017956 exon1 c.G884T p.R295I . . . GSDMC 56169 broad.mit.edu 36 8 130858945 130858945 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031415 exon2 c.T71C p.V24A . . . FAM49B 51571 broad.mit.edu 36 8 130943676 130943676 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016623 exon8 c.C282T p.Y94Y . . . ASAP1 50807 broad.mit.edu 36 8 131483334 131483334 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018482 exon1 c.C38T p.S13L . . . ADCY8 114 broad.mit.edu 36 8 131862074 131862074 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001115 exon18 c.C3500T p.T1167M . . . ADCY8 114 broad.mit.edu 36 8 131985276 131985276 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001115 exon7 c.G1835T p.R612I . . . ADCY8 114 broad.mit.edu 36 8 131991156 131991156 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001115 exon6 c.C1620T p.L540L . . . EFR3A 23167 broad.mit.edu 36 8 133026244 133026244 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015137 exon3 c.G158A p.R53Q . . . KCNQ3 3786 broad.mit.edu 36 8 133251783 133251783 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004519 exon8 c.C1215T p.V405V . . . KCNQ3 3786 broad.mit.edu 36 8 133254071 133254071 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004519 exon7 c.A1096C p.K366Q . . . PHF20L1 51105 broad.mit.edu 36 8 133896066 133896066 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032205 exon10 c.G933A p.A311A . . . TG 7038 broad.mit.edu 36 8 133968099 133968099 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003235 exon9 c.T1300G p.S434A . . . TG 7038 broad.mit.edu 36 8 133968226 133968226 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003235 exon9 c.T1427G p.F476C . . . DLC1 10395 broad.mit.edu 36 8 13401414 13401414 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon2 c.G538A p.E180K . . . TG 7038 broad.mit.edu 36 8 134177739 134177739 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003235 exon43 c.C7512T p.V2504V . . . COL22A1 169044 broad.mit.edu 36 8 139670720 139670720 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152888 exon65 c.C4839T p.F1613F . . . TOP1MT 116447 broad.mit.edu 36 8 144478926 144478926 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_052963 exon5 c.G636C p.R212S . . . ZNF623 9831 broad.mit.edu 36 8 144803744 144803744 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014789 exon1 c.G559T p.D187Y . . . ZNF623 9831 broad.mit.edu 36 8 144804479 144804479 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014789 exon1 c.G1294A p.E432K . . . PARP10 84875 broad.mit.edu 36 8 145131475 145131475 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032789 exon5 c.G683A p.R228Q . . . ZNF7 7553 broad.mit.edu 36 8 146038273 146038273 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003416 exon5 c.G977T p.R326I . . . ZNF16 7564 broad.mit.edu 36 8 146128059 146128059 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006958 exon3 c.G918A p.S306S . . . ZNF16 7564 broad.mit.edu 36 8 146128495 146128495 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006958 exon3 c.G482A p.R161H . . . EFHA2 286097 broad.mit.edu 36 8 16979723 16979723 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181723 exon4 c.C628T p.R210X . . . CNOT7 29883 broad.mit.edu 36 8 17146951 17146951 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013354 exon2 c.C82T p.R28C . . . MTMR7 9108 broad.mit.edu 36 8 17233121 17233121 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004686 exon7 c.G774T p.E258D . . . SLC7A2 6542 broad.mit.edu 36 8 17453873 17453873 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008539 exon6 c.G1055A p.S352N . . . SH2D4A 63898 broad.mit.edu 36 8 19263040 19263040 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174160 exon5 c.T506C p.I169T . . . LPL 4023 broad.mit.edu 36 8 19853617 19853617 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000237 exon3 c.G307T p.E103X . . . SLC18A1 6570 broad.mit.edu 36 8 20051499 20051499 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003053 exon12 c.G1114A p.G372R . . . MYOM2 9172 broad.mit.edu 36 8 2064570 2064570 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003970 exon32 c.G3743A p.R1248Q . . . PIWIL2 55124 broad.mit.edu 36 8 22217571 22217571 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018068 exon11 c.G1274A p.R425H . . . ADAM28 10863 broad.mit.edu 36 8 24233703 24233703 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021777 exon7 c.G586T p.D196Y . . . ADAM28 10863 broad.mit.edu 36 8 24237377 24237377 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021777 exon9 c.C806T p.A269V . . . ADAM7 8756 broad.mit.edu 36 8 24355969 24355969 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003817 exon2 c.C91T p.R31C . . . DOCK5 80005 broad.mit.edu 36 8 25210004 25210004 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024940 exon7 c.G529A p.E177K . . . DOCK5 80005 broad.mit.edu 36 8 25255932 25255932 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024940 exon25 c.G2609A p.R870Q . . . ADRA1A 148 broad.mit.edu 36 8 26778146 26778146 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033302 exon1 c.C258T p.F86F . . . CCDC25 55246 broad.mit.edu 36 8 27670166 27670166 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018246 exon4 c.C157T p.R53X . . . ESCO2 157570 broad.mit.edu 36 8 27690577 27690577 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017420 exon3 c.G833A p.S278N . . . CSMD1 64478 broad.mit.edu 36 8 2823688 2823688 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon55 c.C8420T p.S2807L . . . FZD3 7976 broad.mit.edu 36 8 28465140 28465140 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145866 exon5 c.G1506T p.K502N . . . EXTL3 2137 broad.mit.edu 36 8 28630163 28630163 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001440 exon3 c.G668A p.R223Q . . . INTS9 55756 broad.mit.edu 36 8 28710048 28710048 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145159 exon8 c.T725G p.L242R . . . CSMD1 64478 broad.mit.edu 36 8 2874251 2874251 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon51 c.C7853T p.S2618L . . . HMBOX1 79618 broad.mit.edu 36 8 28932301 28932301 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024567 exon7 c.G803A p.R268Q . . . KIF13B 23303 broad.mit.edu 36 8 29030295 29030295 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015254 exon31 c.G3809T p.R1270I . . . KIF13B 23303 broad.mit.edu 36 8 29032370 29032370 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015254 exon30 c.G3594A p.A1198A . . . KIF13B 23303 broad.mit.edu 36 8 29091003 29091003 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015254 exon9 c.G732T p.E244D . . . CSMD1 64478 broad.mit.edu 36 8 3068675 3068675 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon28 c.C4468T p.R1490C . . . TEX15 56154 broad.mit.edu 36 8 30814071 30814071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon3 c.C8122T p.L2708F . . . TEX15 56154 broad.mit.edu 36 8 30819244 30819244 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.A6832G p.I2278V . . . TEX15 56154 broad.mit.edu 36 8 30821127 30821127 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.C4949A p.A1650D . . . TEX15 56154 broad.mit.edu 36 8 30821772 30821772 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.C4304A p.S1435Y . . . TEX15 56154 broad.mit.edu 36 8 30822343 30822343 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.A3733C p.N1245H . . . TEX15 56154 broad.mit.edu 36 8 30823391 30823391 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.C2685A p.F895L . . . TEX15 56154 broad.mit.edu 36 8 30825537 30825537 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.G539T p.R180I . . . WRN 7486 broad.mit.edu 36 8 31062251 31062251 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000553 exon11 c.G1378A p.D460N . . . WRN 7486 broad.mit.edu 36 8 31109520 31109520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000553 exon24 c.G2923A p.E975K . . . FUT10 84750 broad.mit.edu 36 8 33366442 33366442 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032664 exon4 c.G793A p.D265N . . . RNF122 79845 broad.mit.edu 36 8 33525833 33525833 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024787 exon6 c.C448A p.L150I . . . RNF122 79845 broad.mit.edu 36 8 33525902 33525902 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024787 exon6 c.C379T p.R127C . . . UNC5D 137970 broad.mit.edu 36 8 35703274 35703274 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080872 exon10 c.G1366A p.G456R . . . KCNU1 157855 broad.mit.edu 36 8 36841173 36841173 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001031836 exon19 c.C1985T p.S662L . . . ASH2L 9070 broad.mit.edu 36 8 38097664 38097664 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105214 exon10 c.G723A p.P241P . . . LSM1 27257 broad.mit.edu 36 8 38146532 38146532 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014462 exon3 c.T176G p.I59S . . . TM2D2 83877 broad.mit.edu 36 8 38968153 38968153 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024380 exon4 c.G371A p.R124Q . . . ADAM9 8754 broad.mit.edu 36 8 39066746 39066746 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003816 exon19 c.G2092A p.G698R . . . ADAM32 203102 broad.mit.edu 36 8 39210616 39210616 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145004 exon16 c.G1676A p.R559Q . . . ADAM2 2515 broad.mit.edu 36 8 39743680 39743680 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001464 exon14 c.G1351T p.E451X . . . ANK1 286 broad.mit.edu 36 8 41699895 41699895 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020475 exon9 c.G814A p.E272K . . . MYST3 7994 broad.mit.edu 36 8 41910408 41910408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099413 exon18 c.C4487T p.S1496L . . . MYST3 7994 broad.mit.edu 36 8 41917641 41917641 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099413 exon16 c.G2915A p.R972H . . . MYST3 7994 broad.mit.edu 36 8 41923272 41923272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099413 exon13 c.G1990A p.D664N . . . PLAT 5327 broad.mit.edu 36 8 42156739 42156739 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033011 exon11 c.C1087T p.L363L . . . PLAT 5327 broad.mit.edu 36 8 42165713 42165713 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000930 exon4 c.A149G p.Y50C . . . DKK4 27121 broad.mit.edu 36 8 42350842 42350842 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014420 exon4 c.G608A p.R203Q . . . CHRNA6 8973 broad.mit.edu 36 8 42730231 42730231 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004198 exon5 c.C1268T p.S423L . . . HGSNAT 138050 broad.mit.edu 36 8 43156548 43156548 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152419 exon11 c.A1116G p.E372E . . . POTEA 340441 broad.mit.edu 36 8 43331182 43331182 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005365 exon12 c.T1484G p.V495G . . . PRKDC 5591 broad.mit.edu 36 8 48956627 48956627 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081640 exon38 c.C4969A p.H1657N . . . PRKDC 5591 broad.mit.edu 36 8 49004992 49004992 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081640 exon18 c.A2026C p.N676H . . . EFCAB1 79645 broad.mit.edu 36 8 49804861 49804861 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024593 exon4 c.G442T p.D148Y . . . SNAI2 6591 broad.mit.edu 36 8 49995544 49995544 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003068 exon2 c.C89T p.S30F . . . SNTG1 54212 broad.mit.edu 36 8 51628281 51628281 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018967 exon12 c.A799G p.T267A . . . PCMTD1 115294 broad.mit.edu 36 8 52895783 52895783 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052937 exon6 c.G755A p.R252Q . . . ST18 9705 broad.mit.edu 36 8 53242000 53242000 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014682 exon11 c.C1169T p.S390L . . . ST18 9705 broad.mit.edu 36 8 53242085 53242085 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014682 exon11 c.G1084A p.E362K . . . ST18 9705 broad.mit.edu 36 8 53247374 53247374 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014682 exon10 c.A600C p.E200D . . . XKR4 114786 broad.mit.edu 36 8 56598713 56598713 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052898 exon3 c.C1326A p.I442I . . . TGS1 96764 broad.mit.edu 36 8 56899793 56899793 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024831 exon13 c.C2539T p.R847X . . . LYN 4067 broad.mit.edu 36 8 57029080 57029080 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002350 exon8 c.T773G p.F258C . . . RPS20 6224 broad.mit.edu 36 8 57148328 57148328 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146227 exon4 c.C235T p.R79C . . . FAM110B 90362 broad.mit.edu 36 8 59222066 59222066 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147189 exon5 c.C723T p.A241A . . . CYP7A1 1581 broad.mit.edu 36 8 59572246 59572246 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000780 exon3 c.G379A p.D127N . . . NSMAF 8439 broad.mit.edu 36 8 59710453 59710453 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003580 exon4 c.G261A p.K87K . . . MCPH1 79648 broad.mit.edu 36 8 6487927 6487927 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024596 exon14 c.C2457A p.S819S . . . CYP7B1 9420 broad.mit.edu 36 8 65691292 65691292 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004820 exon3 c.G360T p.E120D . . . MTFR1 9650 broad.mit.edu 36 8 66782727 66782727 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145838 exon5 c.G761A p.R254Q . . . PDE7A 5150 broad.mit.edu 36 8 66794161 66794161 + Missense_Mutation SNP C A A rs28515659 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002603 exon13 c.G1289T p.R430I . . . DNAJC5B 85479 broad.mit.edu 36 8 67126400 67126400 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033105 exon3 c.G64A p.E22K . . . TRIM55 84675 broad.mit.edu 36 8 67209810 67209810 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_184085 exon3 c.G373A p.E125K . . . ADHFE1 137872 broad.mit.edu 36 8 67531632 67531632 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144650 exon11 c.G1013T p.G338V . . . MYBL1 4603 broad.mit.edu 36 8 67672129 67672129 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080416 exon5 c.C502T p.L168F . . . VCPIP1 80124 broad.mit.edu 36 8 67739395 67739395 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025054 exon1 c.C2353T p.R785X . . . CSPP1 79848 broad.mit.edu 36 8 68270366 68270366 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024790 exon29 c.C3650T p.S1217L . . . ARFGEF1 10565 broad.mit.edu 36 8 68273782 68273782 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006421 exon39 c.G5491A p.G1831R . . . ARFGEF1 10565 broad.mit.edu 36 8 68302085 68302085 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006421 exon27 c.C3757T p.R1253X . . . PREX2 80243 broad.mit.edu 36 8 69135469 69135469 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025170 exon11 c.G1240A p.E414K . . . PREX2 80243 broad.mit.edu 36 8 69147285 69147285 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025170 exon14 c.G1495T p.D499Y . . . PREX2 80243 broad.mit.edu 36 8 69194245 69194245 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024870 exon28 c.G3446A p.R1149H . . . C8orf34 116328 broad.mit.edu 36 8 69562828 69562828 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052958 exon5 c.T753C p.D251D . . . SULF1 23213 broad.mit.edu 36 8 70676486 70676486 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128205 exon10 c.A929G p.Y310C . . . SULF1 23213 broad.mit.edu 36 8 70676590 70676590 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128205 exon10 c.C1033T p.R345C . . . SLCO5A1 81796 broad.mit.edu 36 8 70906659 70906659 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030958 exon2 c.T804G p.I268M . . . SLCO5A1 81796 broad.mit.edu 36 8 70907129 70907129 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030958 exon2 c.G334A p.A112T . . . TRAM1 23471 broad.mit.edu 36 8 71682949 71682949 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014294 exon1 c.C40T p.L14L . . . XKR9 389668 broad.mit.edu 36 8 71809054 71809054 + Silent SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011720 exon5 c.C963A p.I321I . . . KCNB2 9312 broad.mit.edu 36 8 73642876 73642876 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004770 exon2 c.C353T p.S118L . . . C8orf84 157869 broad.mit.edu 36 8 74146614 74146614 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153225 exon3 c.G455A p.R152Q . . . LY96 23643 broad.mit.edu 36 8 75101619 75101619 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015364 exon4 c.A373C p.K125Q . . . PI15 51050 broad.mit.edu 36 8 75900227 75900227 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015886 exon2 c.C188T p.S63L . . . ZFHX4 79776 broad.mit.edu 36 8 77923907 77923907 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon7 c.C3633A p.F1211L . . . ZFHX4 79776 broad.mit.edu 36 8 77926736 77926736 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024721 exon10 c.C5024T p.T1675I . . . ZFHX4 79776 broad.mit.edu 36 8 77929390 77929390 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon10 c.C7678T p.P2560S . . . ZFHX4 79776 broad.mit.edu 36 8 77930908 77930908 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon10 c.C9196T p.R3066C . . . SLC10A5 347051 broad.mit.edu 36 8 82769606 82769606 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010893 exon1 c.A157G p.K53E . . . RALYL 138046 broad.mit.edu 36 8 85604353 85604353 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100392 exon3 c.C242T p.A81V . . . RALYL 138046 broad.mit.edu 36 8 85962542 85962542 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100392 exon9 c.C834T p.F278F . . . LRRCC1 85444 broad.mit.edu 36 8 86222919 86222919 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033402 exon7 c.A950G p.N317S . . . ATP6V0D2 245972 broad.mit.edu 36 8 87220869 87220869 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152565 exon3 c.G370T p.E124X . . . WWP1 11059 broad.mit.edu 36 8 87462908 87462908 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007013 exon5 c.G268A p.A90T . . . CPNE3 8895 broad.mit.edu 36 8 87639736 87639736 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003909 exon17 c.G1596A p.T532T . . . CNGB3 54714 broad.mit.edu 36 8 87714152 87714152 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019098 exon11 c.T1264G p.F422V . . . DCAF4L2 138009 broad.mit.edu 36 8 88955023 88955023 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152418 exon1 c.A293G p.K98R . . . OSGIN2 734 broad.mit.edu 36 8 90995531 90995531 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004337 exon3 c.G120A p.P40P . . . OSGIN2 734 broad.mit.edu 36 8 91006078 91006078 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004337 exon6 c.A661C p.K221Q . . . SLC26A7 115111 broad.mit.edu 36 8 92415701 92415701 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134266 exon6 c.T645G p.I215M . . . RUNX1T1 862 broad.mit.edu 36 8 93096005 93096005 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198626 exon5 c.G446A p.R149H . . . TMEM67 91147 broad.mit.edu 36 8 94890545 94890545 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153704 exon25 c.C2641A p.L881I . . . PDP1 54704 broad.mit.edu 36 8 95003847 95003847 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161779 exon3 c.T459A p.S153R . . . CDH17 1015 broad.mit.edu 36 8 95233389 95233389 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144663 exon13 c.T1679C p.V560A . . . RAD54B 25788 broad.mit.edu 36 8 95480952 95480952 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012415 exon8 c.G1244A p.R415H . . . KIAA1429 25962 broad.mit.edu 36 8 95608128 95608128 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015496 exon8 c.T1520C p.L507S . . . PGCP 10404 broad.mit.edu 36 8 98224448 98224448 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016134 exon8 c.A1280G p.Y427C . . . MATN2 4147 broad.mit.edu 36 8 99102644 99102644 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030583 exon13 c.G1855A p.E619K . . . MATN2 4147 broad.mit.edu 36 8 99108858 99108858 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030583 exon14 c.G1981A p.D661N . . . FGF17 8822 broad.mit.edu 36 8 21959565 21959565 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GABBR2 9568 broad.mit.edu 36 9 100113225 100113225 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005458 exon14 c.C1977T p.I659I . . . GALNT12 79695 broad.mit.edu 36 9 100637455 100637455 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024642 exon5 c.G1021A p.E341K . . . COL15A1 1306 broad.mit.edu 36 9 100871836 100871836 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001855 exon42 c.C4014A p.Y1338X . . . TGFBR1 7046 broad.mit.edu 36 9 100930997 100930997 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004612 exon2 c.T137G p.F46C . . . TGFBR1 7046 broad.mit.edu 36 9 100940109 100940109 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004612 exon4 c.C722T p.S241L . . . ALG2 85365 broad.mit.edu 36 9 101020383 101020383 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033087 exon2 c.C905A p.S302Y . . . TEX10 54881 broad.mit.edu 36 9 102148924 102148924 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017746 exon3 c.G766T p.E256X . . . TMEFF1 8577 broad.mit.edu 36 9 102374625 102374625 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003692 exon9 c.G904A p.E302K . . . MURC 347273 broad.mit.edu 36 9 102380636 102380636 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018116 exon1 c.C390A p.F130L . . . MURC 347273 broad.mit.edu 36 9 102388013 102388013 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018116 exon2 c.C554T p.A185V . . . MURC 347273 broad.mit.edu 36 9 102388056 102388056 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018116 exon2 c.G597T p.K199N . . . PPP3R2 5535 broad.mit.edu 36 9 103396625 103396625 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147180 exon1 c.G409A p.D137N . . . CYLC2 1539 broad.mit.edu 36 9 104797488 104797488 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001340 exon1 c.C5T p.S2F . . . CYLC2 1539 broad.mit.edu 36 9 104806828 104806828 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001340 exon4 c.C211T p.R71C . . . OR13D1 286365 broad.mit.edu 36 9 106497103 106497103 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004484 exon1 c.C580A p.L194M . . . ABCA1 19 broad.mit.edu 36 9 106627856 106627856 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005502 exon17 c.C2471T p.S824L . . . ABCA1 19 broad.mit.edu 36 9 106627988 106627988 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005502 exon17 c.G2339A p.S780N . . . TMEM38B 55151 broad.mit.edu 36 9 107576171 107576171 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018112 exon6 c.A865C p.K289Q . . . EPB41L4B 54566 broad.mit.edu 36 9 110976663 110976663 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019114 exon26 c.G2695A p.E899K . . . EPB41L4B 54566 broad.mit.edu 36 9 111058560 111058560 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018424 exon8 c.G774A p.A258A . . . PTPN3 5774 broad.mit.edu 36 9 111229153 111229153 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002829 exon12 c.C899T p.S300F . . . SVEP1 79987 broad.mit.edu 36 9 112209155 112209155 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153366 exon38 c.A8546G p.Y2849C . . . SVEP1 79987 broad.mit.edu 36 9 112232477 112232477 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153366 exon33 c.G5428A p.E1810K . . . MUSK 4593 broad.mit.edu 36 9 112570162 112570162 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005592 exon8 c.C1162T p.P388S . . . KIAA0368 23392 broad.mit.edu 36 9 113230225 113230225 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080398 exon11 c.T1502C p.V501A . . . SNX30 401548 broad.mit.edu 36 9 114619845 114619845 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001012994 exon3 c.C388T p.R130C . . . SLC46A2 57864 broad.mit.edu 36 9 114691662 114691663 + Missense_Mutation DNP AA GG GG novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 AA AA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033051 exon1 c.1120_1121CC . . . . ZNF883 169834 broad.mit.edu 36 9 114800179 114800179 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101338 exon5 c.G182T p.R61I . . . FKBP15 23307 broad.mit.edu 36 9 114986403 114986403 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015258 exon17 c.G1706A p.R569Q . . . PRPF4 9128 broad.mit.edu 36 9 115088925 115088925 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004697 exon9 c.G931A p.D311N . . . AMBP 259 broad.mit.edu 36 9 115863533 115863533 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001633 exon8 c.G845A p.R282Q . . . COL27A1 85301 broad.mit.edu 36 9 115996557 115996557 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032888 exon6 c.A2069C p.K690T . . . COL27A1 85301 broad.mit.edu 36 9 116047988 116047988 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032888 exon24 c.C2956T p.R986W . . . ORM1 5004 broad.mit.edu 36 9 116125898 116125898 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000607 exon2 c.C249T p.Y83Y . . . ORM1 5004 broad.mit.edu 36 9 116126910 116126910 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000607 exon4 c.C348T p.F116F . . . TNC 3371 broad.mit.edu 36 9 116838283 116838283 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002160 exon21 c.C5571T p.L1857L . . . TNC 3371 broad.mit.edu 36 9 116889242 116889242 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002160 exon3 c.C589T p.R197X . . . PAPPA 5069 broad.mit.edu 36 9 118149195 118149195 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002581 exon15 c.G3850A p.D1284N . . . ASTN2 23245 broad.mit.edu 36 9 118607794 118607794 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014010 exon12 c.A2181G p.L727L . . . CDK5RAP2 55755 broad.mit.edu 36 9 122217228 122217228 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018249 exon28 c.G4208A p.R1403Q . . . CDK5RAP2 55755 broad.mit.edu 36 9 122221924 122221924 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018249 exon27 c.A4140C p.T1380T . . . C5 727 broad.mit.edu 36 9 122754866 122754866 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001735 exon41 c.C5003T p.A1668V . . . C5 727 broad.mit.edu 36 9 122764842 122764842 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001735 exon36 c.C4432T p.R1478W . . . C5 727 broad.mit.edu 36 9 122823681 122823681 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001735 exon11 c.T1229C p.V410A . . . C5 727 broad.mit.edu 36 9 122840032 122840032 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001735 exon4 c.C440T p.S147L . . . CEP110 11064 broad.mit.edu 36 9 122954755 122954755 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007018 exon24 c.G4135T p.E1379X . . . MRRF 92399 broad.mit.edu 36 9 124087347 124087347 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138777 exon4 c.C419T p.S140L . . . OR1J1 347168 broad.mit.edu 36 9 124279115 124279115 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004451 exon1 c.C912A p.L304L . . . OR1N2 138882 broad.mit.edu 36 9 124356258 124356258 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004457 exon1 c.T989G p.L330X . . . OR5C1 392391 broad.mit.edu 36 9 124591367 124591367 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001923 exon1 c.C335T p.A112V . . . RABGAP1 23637 broad.mit.edu 36 9 124901647 124901647 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012197 exon24 c.C2887T p.R963W . . . STRBP 55342 broad.mit.edu 36 9 124934973 124934973 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171137 exon17 c.G1827A p.A609A . . . STRBP 55342 broad.mit.edu 36 9 124963150 124963150 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171137 exon7 c.A512C p.D171A . . . GOLGA1 2800 broad.mit.edu 36 9 126683987 126683987 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002077 exon21 c.C2033T p.A678V . . . TYRP1 7306 broad.mit.edu 36 9 12694611 12694611 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000550 exon6 c.A1167G p.G389G . . . HSPA5 3309 broad.mit.edu 36 9 127039230 127039230 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005347 exon8 c.A1427C p.N476T . . . ANGPTL2 23452 broad.mit.edu 36 9 128910642 128910642 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012098 exon2 c.C190T p.R64W . . . GARNL3 84253 broad.mit.edu 36 9 129138314 129138314 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032293 exon11 c.C960T p.S320S . . . LRSAM1 90678 broad.mit.edu 36 9 129257694 129257694 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001005373 exon5 c.G148T p.A50S . . . STXBP1 6812 broad.mit.edu 36 9 129472020 129472020 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003165 exon11 c.G925T p.D309Y . . . MPDZ 8777 broad.mit.edu 36 9 13103022 13103022 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003829 exon40 c.C5502T p.V1834V . . . FNBP1 23048 broad.mit.edu 36 9 131729439 131729439 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015033 exon8 c.A645C p.K215N . . . ABL1 25 broad.mit.edu 36 9 132719390 132719390 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005157 exon2 c.C198T p.F66F . . . POMT1 10585 broad.mit.edu 36 9 133386585 133386585 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007171 exon18 c.T1796C p.I599T . . . RAPGEF1 2889 broad.mit.edu 36 9 133491138 133491138 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198679 exon10 c.A1697G p.N566S . . . NTNG2 84628 broad.mit.edu 36 9 134104316 134104316 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_032536 exon6 c.C1059T p.C353C . . . SETX 23064 broad.mit.edu 36 9 134196488 134196488 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015046 exon8 c.T1007C p.V336A . . . GTF3C4 9329 broad.mit.edu 36 9 134543226 134543226 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012204 exon2 c.C399T p.F133F . . . TSC1 7248 broad.mit.edu 36 9 134790943 134790943 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001162426 exon5 c.T215G p.L72R . . . C9orf7 11094 broad.mit.edu 36 9 135320276 135320276 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_017586 exon3 c.T206C p.F69S . . . COL5A1 1289 broad.mit.edu 36 9 136763794 136763794 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000093 exon9 c.G1389A p.P463P . . . SEC16A 9919 broad.mit.edu 36 9 138489339 138489339 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014866 exon3 c.G2550A p.S850S . . . CACNA1B 774 broad.mit.edu 36 9 140021090 140021090 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_000718 exon16 c.G2025A p.S675S . . . CACNA1B 774 broad.mit.edu 36 9 140068211 140068211 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000718 exon26 c.G3900A p.A1300A . . . CACNA1B 774 broad.mit.edu 36 9 140116994 140116994 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000718 exon37 c.A5233C p.S1745R . . . NFIB 4781 broad.mit.edu 36 9 14297434 14297434 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190738 exon2 c.G194A p.R65H . . . CER1 9350 broad.mit.edu 36 9 14712278 14712278 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005454 exon1 c.G393T p.K131N . . . TTC39B 158219 broad.mit.edu 36 9 15204181 15204181 + Silent SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168340 exon4 c.T438C p.F146F . . . TTC39B 158219 broad.mit.edu 36 9 15257938 15257938 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001168340 exon2 c.C249T p.F83F . . . C9orf93 203238 broad.mit.edu 36 9 15836804 15836804 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173550 exon22 c.G3372A p.E1124E . . . BNC2 54796 broad.mit.edu 36 9 16425954 16425954 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017637 exon6 c.C2238T p.S746S . . . BNC2 54796 broad.mit.edu 36 9 16426658 16426658 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017637 exon6 c.C1534T p.R512W . . . PLIN2 123 broad.mit.edu 36 9 19106547 19106547 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122 exon8 c.A1013C p.N338T . . . DENND4C 55667 broad.mit.edu 36 9 19336864 19336864 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017925 exon18 c.G3242A p.R1081Q . . . KIAA1797 54914 broad.mit.edu 36 9 20730309 20730309 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017794 exon7 c.A362C p.E121A . . . KIAA1797 54914 broad.mit.edu 36 9 20985592 20985592 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017794 exon46 c.G5370A p.K1790K . . . SMARCA2 6595 broad.mit.edu 36 9 2105855 2105855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139045 exon25 c.G3490A p.G1164R . . . IFNA16 3449 broad.mit.edu 36 9 21207004 21207004 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002173 exon1 c.G301A p.D101N . . . KLHL9 55958 broad.mit.edu 36 9 21324137 21324137 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018847 exon1 c.G722A p.R241Q . . . IFNA13 3447 broad.mit.edu 36 9 21357676 21357676 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006900 exon1 c.G334A p.E112K . . . IFNA13 3447 broad.mit.edu 36 9 21357955 21357955 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006900 exon1 c.T55C p.S19P . . . IFNA2 3440 broad.mit.edu 36 9 21375050 21375050 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000605 exon1 c.G279T p.K93N . . . IFNA1 3439 broad.mit.edu 36 9 21430837 21430837 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024013 exon1 c.G331A p.E111K . . . SMARCA2 6595 broad.mit.edu 36 9 2171578 2171578 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139045 exon29 c.C4207T p.R1403X . . . VLDLR 7436 broad.mit.edu 36 9 2641891 2641891 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001018056 exon16 c.G2269A p.A757T . . . IFT74 80173 broad.mit.edu 36 9 27046348 27046348 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099222 exon18 c.G1514A p.R505K . . . TEK 7010 broad.mit.edu 36 9 27147925 27147925 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000459 exon2 c.G149A p.R50H . . . TEK 7010 broad.mit.edu 36 9 27148095 27148095 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000459 exon2 c.C319T p.R107X . . . C9orf11 54586 broad.mit.edu 36 9 27286684 27286684 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161585 exon2 c.G129T p.K43N . . . LINGO2 158038 broad.mit.edu 36 9 27939623 27939623 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152570 exon7 c.C1047T p.V349V . . . LINGO2 158038 broad.mit.edu 36 9 27940328 27940328 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152570 exon7 c.C342T p.G114G . . . KIAA0020 9933 broad.mit.edu 36 9 2821284 2821284 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014878 exon6 c.G577A p.E193K . . . ACO1 48 broad.mit.edu 36 9 32408190 32408190 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T T T T Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_002197 exon5 c.T469G p.L157V . . . ACO1 48 broad.mit.edu 36 9 32413350 32413350 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002197 exon9 c.A1004C p.K335T . . . TOPORS 10210 broad.mit.edu 36 9 32532463 32532463 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195622 exon2 c.G1865T p.R622I . . . TAF1L 138474 broad.mit.edu 36 9 32622302 32622302 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153809 exon1 c.G3276T p.Q1092H . . . TAF1L 138474 broad.mit.edu 36 9 32623044 32623044 + Missense_Mutation SNP C T T rs34787787 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153809 exon1 c.G2534A p.R845Q . . . TAF1L 138474 broad.mit.edu 36 9 32623390 32623390 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153809 exon1 c.G2188T p.D730Y . . . NFX1 4799 broad.mit.edu 36 9 33342713 33342713 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002504 exon17 c.C2725T p.Q909X . . . UBAP2 55833 broad.mit.edu 36 9 33923619 33923619 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018449 exon18 c.G1977T p.K659N . . . GALT 2592 broad.mit.edu 36 9 34640384 34640384 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000155 exon11 c.G1078A p.A360T . . . KIAA1045 23349 broad.mit.edu 36 9 34961592 34961592 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_015297 exon2 c.C297A p.F99L . . . C9orf131 138724 broad.mit.edu 36 9 35033726 35033726 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040411 exon2 c.A881G p.D294G . . . PIGO 84720 broad.mit.edu 36 9 35082618 35082618 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032634 exon7 c.G1266A p.P422P . . . STOML2 30968 broad.mit.edu 36 9 35090957 35090957 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013442 exon8 c.G776A p.R259Q . . . UNC13B 10497 broad.mit.edu 36 9 35285718 35285718 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_006377 exon8 c.C552T p.V184V . . . TESK1 7016 broad.mit.edu 36 9 35597377 35597377 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006285 exon5 c.C591T p.F197F . . . CD72 971 broad.mit.edu 36 9 35602862 35602862 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001782 exon6 c.G817T p.E273X . . . SPAG8 26206 broad.mit.edu 36 9 35800657 35800657 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172312 exon4 c.G1062T p.E354D . . . SPAG8 26206 broad.mit.edu 36 9 35801028 35801028 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172312 exon3 c.C891T p.V297V . . . TMEM8B 51754 broad.mit.edu 36 9 35832452 35832452 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016446 exon7 c.C17A p.S6Y . . . MELK 9833 broad.mit.edu 36 9 36659327 36659327 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014791 exon15 c.G1429T p.E477X . . . ZNF658 26149 broad.mit.edu 36 9 40763362 40763362 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033160 exon5 c.C1913A p.S638Y . . . JAK2 3717 broad.mit.edu 36 9 5044592 5044592 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004972 exon7 c.G644A p.R215Q . . . INSL6 11172 broad.mit.edu 36 9 5154126 5154126 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007179 exon2 c.G429T p.E143D . . . KIAA2026 158358 broad.mit.edu 36 9 5909959 5909959 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017969 exon8 c.C6037A p.L2013I . . . RANBP6 26953 broad.mit.edu 36 9 6004743 6004743 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012416 exon1 c.G865A p.E289K . . . UHRF2 115426 broad.mit.edu 36 9 6450659 6450659 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152896 exon4 c.T731C p.V244A . . . GLDC 2731 broad.mit.edu 36 9 6577268 6577268 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000170 exon15 c.G1723T p.E575X . . . PIP5K1B 8395 broad.mit.edu 36 9 70699309 70699309 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003558 exon8 c.G706A p.E236K . . . TRPM3 80036 broad.mit.edu 36 9 72403305 72403305 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007471 exon20 c.C2862T p.V954V . . . KANK1 23189 broad.mit.edu 36 9 730881 730881 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153186 exon8 c.C3169T p.R1057W . . . KANK1 23189 broad.mit.edu 36 9 732230 732230 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153186 exon9 c.C3248T p.A1083V . . . TMEM2 23670 broad.mit.edu 36 9 73550004 73550004 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013390 exon4 c.G784A p.D262N . . . RORB 6096 broad.mit.edu 36 9 76439411 76439411 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006914 exon3 c.C138G p.C46W . . . RORB 6096 broad.mit.edu 36 9 76472603 76472603 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006914 exon8 c.C1077T p.I359I . . . TRPM6 140803 broad.mit.edu 36 9 76544169 76544169 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177310 exon35 c.G5489T p.R1830I . . . TRPM6 140803 broad.mit.edu 36 9 76567685 76567685 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177310 exon26 c.G3707T p.R1236I . . . TRPM6 140803 broad.mit.edu 36 9 76601556 76601556 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177310 exon18 c.T2297C p.V766A . . . TRPM6 140803 broad.mit.edu 36 9 76606814 76606814 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001177310 exon16 c.A1814G p.D605G . . . TRPM6 140803 broad.mit.edu 36 9 76625156 76625156 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177310 exon9 c.C1003T p.R335X . . . PCSK5 5125 broad.mit.edu 36 9 77900838 77900838 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190482 exon8 c.C1107T p.I369I . . . PRUNE2 158471 broad.mit.edu 36 9 78651306 78651306 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015225 exon4 c.G453A p.E151E . . . VPS13A 23230 broad.mit.edu 36 9 79042754 79042754 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon18 c.G1612T p.D538Y . . . VPS13A 23230 broad.mit.edu 36 9 79100459 79100459 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon32 c.T3572C p.F1191S . . . VPS13A 23230 broad.mit.edu 36 9 79165351 79165351 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon58 c.G8068A p.E2690K . . . CEP78 84131 broad.mit.edu 36 9 80056708 80056708 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001098802 exon9 c.G1137A p.A379A . . . CEP78 84131 broad.mit.edu 36 9 80071403 80071403 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098802 exon16 c.A2074G p.N692D . . . PTPRD 5789 broad.mit.edu 36 9 8331948 8331948 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040712 exon24 c.C3462T p.I1154I . . . FAM75D1 389763 broad.mit.edu 36 9 83795717 83795717 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001670 exon4 c.C512T p.T171I . . . PTPRD 5789 broad.mit.edu 36 9 8474264 8474264 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040712 exon13 c.A2026C p.N676H . . . PTPRD 5789 broad.mit.edu 36 9 8474375 8474375 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040712 exon13 c.C1915A p.L639I . . . HNRNPK 3190 broad.mit.edu 36 9 85776879 85776879 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002140 exon11 c.G691A p.D231N . . . NTRK2 4915 broad.mit.edu 36 9 86826012 86826012 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006180 exon21 c.G2357A p.R786Q . . . DAPK1 1612 broad.mit.edu 36 9 89452084 89452084 + Silent SNP C T T rs55637131 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004938 exon14 c.C1275T p.V425V . . . CTSL1 1514 broad.mit.edu 36 9 89535796 89535796 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145918 exon8 c.G956T p.R319I . . . LOC286238 286238 broad.mit.edu 36 9 90452171 90452171 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100111 exon2 c.C292A p.L98I . . . S1PR3 1903 broad.mit.edu 36 9 90806292 90806292 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005226 exon2 c.C357T p.F119F . . . NFIL3 4783 broad.mit.edu 36 9 93212014 93212014 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005384 exon2 c.C824T p.S275L . . . ROR2 4920 broad.mit.edu 36 9 93526583 93526583 + Missense_Mutation SNP C T T rs55651110 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004560 exon9 c.G2014A p.D672N . . . ECM2 1842 broad.mit.edu 36 9 94298430 94298430 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001393 exon10 c.A2088C p.Q696H . . . BICD2 23299 broad.mit.edu 36 9 94521217 94521217 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015250 exon5 c.G1531A p.D511N . . . BICD2 23299 broad.mit.edu 36 9 94524880 94524880 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015250 exon3 c.G485A p.R162H . . . ZNF484 83744 broad.mit.edu 36 9 94649847 94649847 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007101 exon4 c.G935T p.R312I . . . ZNF484 83744 broad.mit.edu 36 9 94650478 94650478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007101 exon4 c.C304T p.R102C . . . PHF2 5253 broad.mit.edu 36 9 95465702 95465702 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005392 exon14 c.A1901C p.K634T . . . FAM22F 54754 broad.mit.edu 36 9 96124361 96124361 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017561 exon3 c.G785A p.R262Q . . . FBP2 8789 broad.mit.edu 36 9 96389437 96389437 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_003837 exon2 c.C306T p.D102D . . . C9orf3 84909 broad.mit.edu 36 9 96884756 96884756 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032823 exon14 c.G2101A p.E701K . . . FANCC 2176 broad.mit.edu 36 9 96903921 96903921 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000136 exon15 c.C1566A p.I522I . . . PTCH1 5727 broad.mit.edu 36 9 97271142 97271142 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083605 exon14 c.G1509A p.T503T . . . SLC35D2 11046 broad.mit.edu 36 9 98123427 98123427 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007001 exon12 c.G932T p.R311I . . . ZNF367 195828 broad.mit.edu 36 9 98196955 98196955 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153695 exon3 c.G662A p.G221E . . . CTSL2 1515 broad.mit.edu 36 9 98836945 98836945 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001333 exon7 c.C789T p.G263G . . . TDRD7 23424 broad.mit.edu 36 9 99233093 99233093 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014290 exon3 c.C265T p.R89C . . . TMOD1 7111 broad.mit.edu 36 9 99348345 99348345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166116 exon3 c.G178A p.G60S . . . XPA 7507 broad.mit.edu 36 9 99495785 99495785 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000380 exon2 c.G250T p.E84X . . . WWC3 55841 broad.mit.edu 36 X 10006904 10006904 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015691 exon4 c.C286T p.R96C . . . TRMT2B 79979 broad.mit.edu 36 X 100163694 100163694 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167970 exon9 c.T770C p.V257A . . . BTK 695 broad.mit.edu 36 X 100500055 100500055 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000061 exon12 c.A1001G p.Y334C . . . BTK 695 broad.mit.edu 36 X 100503879 100503879 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000061 exon7 c.A526C p.K176Q . . . WWC3 55841 broad.mit.edu 36 X 10050717 10050717 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015691 exon12 c.C1689T p.S563S . . . BTK 695 broad.mit.edu 36 X 100516268 100516268 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000061 exon3 c.G152A p.S51N . . . GLA 2717 broad.mit.edu 36 X 100540551 100540551 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000169 exon5 c.C679T p.R227X . . . TMSB15A 11013 broad.mit.edu 36 X 101656716 101656716 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021992 exon2 c.A32T p.E11V . . . ARMCX5 64860 broad.mit.edu 36 X 101744417 101744417 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168485 exon5 c.T692C p.V231A . . . GPRASP2 114928 broad.mit.edu 36 X 101858655 101858655 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004051 exon5 c.G2202A p.T734T . . . BHLHB9 80823 broad.mit.edu 36 X 101892139 101892139 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142528 exon4 c.C1560T p.G520G . . . WBP5 51186 broad.mit.edu 36 X 102499494 102499494 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006612 exon3 c.G226A p.E76K . . . MORF4L2 9643 broad.mit.edu 36 X 102818108 102818108 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142429 exon5 c.G504A p.S168S . . . GLRA4 441509 broad.mit.edu 36 X 102865757 102865757 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172285 exon4 c.C399T p.F133F . . . ESX1 80712 broad.mit.edu 36 X 103385523 103385523 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153448 exon2 c.C474T p.F158F . . . MORC4 79710 broad.mit.edu 36 X 106071442 106071442 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085354 exon17 c.C2699T p.S900L . . . MORC4 79710 broad.mit.edu 36 X 106072996 106072996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085354 exon15 c.C1781T p.A594V . . . MID2 11043 broad.mit.edu 36 X 107056736 107056736 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012216 exon10 c.A1985G p.N662S . . . COL4A6 1288 broad.mit.edu 36 X 107317856 107317856 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033641 exon22 c.C1645A p.L549I . . . IRS4 8471 broad.mit.edu 36 X 107862852 107862852 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003604 exon1 c.A3379C p.T1127P . . . GUCY2F 2986 broad.mit.edu 36 X 108538895 108538895 + Silent SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001522 exon9 c.C1950A p.L650L . . . KCNE1L 23630 broad.mit.edu 36 X 108754705 108754705 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012282 exon1 c.G201T p.M67I . . . CHRDL1 91851 broad.mit.edu 36 X 109806189 109806189 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001143981 exon12 c.C1303T p.R435C . . . CAPN6 827 broad.mit.edu 36 X 110393708 110393708 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014289 exon2 c.C113A p.S38Y . . . ARHGAP6 395 broad.mit.edu 36 X 11106234 11106234 + Silent SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013423 exon8 c.T927G p.P309P . . . LUZP4 51213 broad.mit.edu 36 X 114442852 114442852 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016383 exon2 c.C131T p.A44V . . . AGTR2 186 broad.mit.edu 36 X 115218097 115218097 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000686 exon3 c.T536G p.F179C . . . DOCK11 139818 broad.mit.edu 36 X 117670030 117670030 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144658 exon42 c.A4657G p.I1553V . . . KIAA1210 57481 broad.mit.edu 36 X 118103462 118103462 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020721 exon12 c.A4760C p.K1587T . . . SEPT6 23157 broad.mit.edu 36 X 118681613 118681613 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145799 exon3 c.C201T p.F67F . . . FAM70A 55026 broad.mit.edu 36 X 119294829 119294829 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017938 exon8 c.A686G p.N229S . . . C1GALT1C1 29071 broad.mit.edu 36 X 119644745 119644745 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152692 exon3 c.C305T p.S102F . . . GLUD2 2747 broad.mit.edu 36 X 120009595 120009595 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012084 exon1 c.G376A p.D126N . . . THOC2 57187 broad.mit.edu 36 X 122575671 122575671 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081550 exon34 c.A4362C p.E1454D . . . THOC2 57187 broad.mit.edu 36 X 122585416 122585416 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081550 exon28 c.A3406C p.K1136Q . . . STAG2 10735 broad.mit.edu 36 X 123012702 123012702 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042750 exon12 c.T1068C p.Y356Y . . . FRMPD4 9758 broad.mit.edu 36 X 12542886 12542886 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014728 exon4 c.C387T p.S129S . . . FRMPD4 9758 broad.mit.edu 36 X 12618320 12618320 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014728 exon8 c.C767T p.A256V . . . SMARCA1 6594 broad.mit.edu 36 X 128432892 128432892 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003069 exon20 c.G2535A p.E845E . . . TLR8 51311 broad.mit.edu 36 X 12847474 12847474 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138636 exon2 c.C394T p.L132F . . . TLR8 51311 broad.mit.edu 36 X 12849716 12849716 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138636 exon2 c.T2636C p.F879S . . . XPNPEP2 7512 broad.mit.edu 36 X 128730031 128730031 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003399 exon21 c.C1914T p.F638F . . . ELF4 2000 broad.mit.edu 36 X 129042944 129042944 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001421 exon2 c.C42T p.F14F . . . ARHGAP36 158763 broad.mit.edu 36 X 130047324 130047324 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144967 exon8 c.G1037A p.R346H . . . IGSF1 3547 broad.mit.edu 36 X 130242903 130242903 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170962 exon8 c.T1589C p.I530T . . . OR13H1 347468 broad.mit.edu 36 X 130506537 130506537 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004486 exon1 c.A809G p.D270G . . . MST4 51765 broad.mit.edu 36 X 131029978 131029978 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001042453 exon4 c.T154G p.L52V . . . HS6ST2 90161 broad.mit.edu 36 X 131590127 131590127 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077188 exon6 c.G1743A p.P581P . . . ATXN3L 92552 broad.mit.edu 36 X 13247022 13247022 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135995 exon1 c.C953T p.S318L . . . CT45A5 441521 broad.mit.edu 36 X 134775575 134775575 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172288 exon3 c.G416A p.R139Q . . . SAGE1 55511 broad.mit.edu 36 X 134816325 134816325 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018666 exon7 c.C685T p.R229C . . . GPR112 139378 broad.mit.edu 36 X 135255738 135255738 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153834 exon6 c.T2207A p.F736Y . . . GPR112 139378 broad.mit.edu 36 X 135258720 135258720 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153834 exon6 c.A5189G p.N1730S . . . GPR112 139378 broad.mit.edu 36 X 135269146 135269146 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153834 exon11 c.G7010A p.S2337N . . . GPR112 139378 broad.mit.edu 36 X 135315610 135315610 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153834 exon23 c.T8748C p.V2916V . . . VGLL1 51442 broad.mit.edu 36 X 135460597 135460597 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016267 exon4 c.G639T p.K213N . . . TCEANC 170082 broad.mit.edu 36 X 13591089 13591089 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152634 exon4 c.C631A p.L211I . . . GPR101 83550 broad.mit.edu 36 X 135940218 135940218 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054021 exon1 c.G1282A p.E428K . . . CSF2RA 1438 broad.mit.edu 36 X 1367431 1367431 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_172245 exon5 c.C239T p.S80L . . . F9 2158 broad.mit.edu 36 X 138471660 138471660 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000133 exon8 c.C1150T p.R384X . . . MCF2 4168 broad.mit.edu 36 X 138536551 138536551 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099855 exon8 c.A649C p.K217Q . . . ATP11C 286410 broad.mit.edu 36 X 138692495 138692495 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010986 exon18 c.G1838T p.R613I . . . LDOC1 23641 broad.mit.edu 36 X 140098620 140098620 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012317 exon1 c.G253A p.D85N . . . MAGEC1 9947 broad.mit.edu 36 X 140821926 140821926 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005462 exon4 c.C1070A p.S357Y . . . MAGEC1 9947 broad.mit.edu 36 X 140822886 140822886 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005462 exon4 c.A2030G p.Q677R . . . SLITRK2 84631 broad.mit.edu 36 X 144713042 144713042 + Silent SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144006 exon3 c.T1407G p.A469A . . . GLRA2 2742 broad.mit.edu 36 X 14537206 14537206 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001118885 exon8 c.G888A p.T296T . . . AFF2 2334 broad.mit.edu 36 X 147551328 147551328 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002025 exon3 c.A388G p.T130A . . . FANCB 2187 broad.mit.edu 36 X 14772572 14772572 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018113 exon9 c.C2139T p.F713F . . . AFF2 2334 broad.mit.edu 36 X 147845746 147845746 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002025 exon11 c.C2471T p.A824V . . . MAMLD1 10046 broad.mit.edu 36 X 149389330 149389330 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001177466 exon2 c.C752A p.S251Y . . . MTMR1 8776 broad.mit.edu 36 X 149649734 149649734 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003828 exon7 c.G713T p.R238I . . . CD99L2 83692 broad.mit.edu 36 X 149714375 149714375 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134446 exon4 c.G245A p.R82Q . . . PRRG3 79057 broad.mit.edu 36 X 150619151 150619151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024082 exon3 c.C35T p.S12L . . . GABRE 2564 broad.mit.edu 36 X 150874607 150874607 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004961 exon8 c.C1026A p.F342L . . . PNMA5 114824 broad.mit.edu 36 X 151910056 151910056 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103150 exon2 c.T743C p.F248S . . . TKTL1 8277 broad.mit.edu 36 X 153204751 153204751 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145933 exon9 c.C1173T p.D391D . . . F8 2157 broad.mit.edu 36 X 153785987 153785987 + Missense_Mutation SNP C A A rs28933678 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon17 c.G5593T p.D1865Y . . . F8 2157 broad.mit.edu 36 X 153812819 153812819 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon14 c.C2440T p.R814X . . . F8 2157 broad.mit.edu 36 X 153829181 153829181 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon13 c.C2099T p.S700L . . . MTCP1 4515 broad.mit.edu 36 X 153945448 153945448 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018024 exon2 c.G45T p.Q15H . . . P2RY8 286530 broad.mit.edu 36 X 1544669 1544669 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178129 exon2 c.C783T p.I261I . . . BMX 660 broad.mit.edu 36 X 15465326 15465326 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_203281 exon14 c.C1371A p.F457L . . . VAMP7 6845 broad.mit.edu 36 X 154772457 154772457 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005638 exon2 c.A134G p.Y45C . . . RBBP7 5931 broad.mit.edu 36 X 16780858 16780858 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198719 exon7 c.G952A p.E318K . . . NHS 4810 broad.mit.edu 36 X 17660129 17660129 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136024 exon9 c.G4049A p.R1350H . . . BEND2 139105 broad.mit.edu 36 X 18129883 18129883 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_153346 exon6 c.T1006G p.L336V . . . BEND2 139105 broad.mit.edu 36 X 18131759 18131759 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153346 exon5 c.C690T p.F230F . . . PPEF1 5475 broad.mit.edu 36 X 18710417 18710417 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152226 exon11 c.G738A p.T246T . . . GPR64 10149 broad.mit.edu 36 X 18996801 18996801 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184837 exon3 c.C73A p.L25I . . . SMS 6611 broad.mit.edu 36 X 21905234 21905234 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004595 exon5 c.C464T p.S155L . . . PHEX 5251 broad.mit.edu 36 X 21961068 21961068 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000444 exon1 c.C24T p.S8S . . . KLHL15 80311 broad.mit.edu 36 X 23916295 23916295 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030624 exon4 c.C1479T p.F493F . . . MAGEB10 139422 broad.mit.edu 36 X 27750253 27750253 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182506 exon3 c.C909A p.F303L . . . ARSH 347527 broad.mit.edu 36 X 2946657 2946657 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011719 exon5 c.C847T p.R283C . . . CXorf21 80231 broad.mit.edu 36 X 30488178 30488178 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025159 exon3 c.G216A p.E72E . . . TAB3 257397 broad.mit.edu 36 X 30780826 30780826 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152787 exon7 c.C1700T p.A567V . . . DMD 1756 broad.mit.edu 36 X 31607556 31607556 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004021 exon10 c.G349A p.E117K . . . DMD 1756 broad.mit.edu 36 X 31857732 31857732 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004011 exon19 c.G2791T p.E931X . . . DMD 1756 broad.mit.edu 36 X 32366389 32366389 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004006 exon29 c.A3961C p.N1321H . . . MXRA5 25878 broad.mit.edu 36 X 3252450 3252450 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015419 exon5 c.C1276A p.L426I . . . MXRA5 25878 broad.mit.edu 36 X 3252528 3252528 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015419 exon5 c.G1198T p.D400Y . . . CXorf22 170063 broad.mit.edu 36 X 35884145 35884145 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152632 exon8 c.G1321A p.E441K . . . CXorf59 286464 broad.mit.edu 36 X 36013436 36013436 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173695 exon5 c.G501A p.K167K . . . SRPX 8406 broad.mit.edu 36 X 37918443 37918443 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006307 exon3 c.G263A p.R88H . . . OTC 5009 broad.mit.edu 36 X 38114051 38114051 + Missense_Mutation SNP G A A rs66550391 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000531 exon3 c.G275A p.R92Q . . . OTC 5009 broad.mit.edu 36 X 38147901 38147901 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000531 exon6 c.G627A p.A209A . . . BCOR 54880 broad.mit.edu 36 X 39817402 39817402 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A A A A Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001123383 exon4 c.T2141G p.V714G . . . CXorf38 159013 broad.mit.edu 36 X 40383232 40383232 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144970 exon3 c.C444T p.F148F . . . USP9X 8239 broad.mit.edu 36 X 40930726 40930726 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039590 exon24 c.A3571G p.T1191A . . . USP9X 8239 broad.mit.edu 36 X 40932235 40932235 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039590 exon25 c.A3731C p.K1244T . . . GPR34 2857 broad.mit.edu 36 X 41440081 41440081 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005300 exon3 c.G251A p.R84H . . . CASK 8573 broad.mit.edu 36 X 41483621 41483621 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126054 exon5 c.G389A p.R130H . . . EFHC2 80258 broad.mit.edu 36 X 43973869 43973869 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025184 exon11 c.A1721C p.H574P . . . FUNDC1 139341 broad.mit.edu 36 X 44286210 44286210 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173794 exon2 c.T110G p.F37C . . . ZNF674 641339 broad.mit.edu 36 X 46244792 46244792 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190417 exon6 c.A1161C p.K387N . . . SLC9A7 84679 broad.mit.edu 36 X 46357697 46357697 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032591 exon16 c.C1897T p.R633X . . . NDUFB11 54539 broad.mit.edu 36 X 46886761 46886761 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_019056 exon3 c.G391A p.E131K . . . CACNA1F 778 broad.mit.edu 36 X 48971717 48971717 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005183 exon7 c.C954T p.F318F . . . PPP1R3F 89801 broad.mit.edu 36 X 49029294 49029294 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033215 exon4 c.A1198C p.S400R . . . CLCN5 1184 broad.mit.edu 36 X 49721368 49721368 + Silent SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127899 exon5 c.T258C p.D86D . . . CCNB3 85417 broad.mit.edu 36 X 50069799 50069799 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033031 exon5 c.G1890A p.T630T . . . SHROOM4 57477 broad.mit.edu 36 X 50367240 50367240 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020717 exon6 c.T3642G p.D1214E . . . GSPT2 23708 broad.mit.edu 36 X 51504183 51504183 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018094 exon1 c.G721T p.E241X . . . SPANXN5 494197 broad.mit.edu 36 X 52842363 52842363 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009616 exon2 c.G109A p.E37K . . . HUWE1 10075 broad.mit.edu 36 X 53627537 53627537 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031407 exon42 c.C5226T p.I1742I . . . PHF8 23133 broad.mit.edu 36 X 54028385 54028385 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184898 exon19 c.C2079T p.S693S . . . WNK3 65267 broad.mit.edu 36 X 54292180 54292180 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002838 exon17 c.G3326A p.R1109Q . . . ITIH5L 347365 broad.mit.edu 36 X 54817282 54817282 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198510 exon6 c.T860C p.V287A . . . MAGED2 10916 broad.mit.edu 36 X 54854776 54854776 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201222 exon6 c.G955A p.E319K . . . TRO 7216 broad.mit.edu 36 X 54970876 54970876 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016157 exon11 c.C1815A p.F605L . . . FOXR2 139628 broad.mit.edu 36 X 55666898 55666898 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198451 exon1 c.T29G p.F10C . . . UBQLN2 29978 broad.mit.edu 36 X 56608183 56608183 + Silent SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013444 exon1 c.G1152A p.Q384Q . . . NLGN4X 57502 broad.mit.edu 36 X 5821554 5821554 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020742 exon6 c.G1755A p.T585T . . . HEPH 9843 broad.mit.edu 36 X 65325070 65325070 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130860 exon5 c.A779C p.K260T . . . EDA2R 60401 broad.mit.edu 36 X 65752510 65752510 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001199687 exon2 c.G78A p.E26E . . . AWAT2 158835 broad.mit.edu 36 X 69186444 69186444 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002254 exon1 c.T64C p.S22P . . . P2RY4 5030 broad.mit.edu 36 X 69395865 69395865 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002565 exon1 c.G335A p.R112H . . . KIF4A 24137 broad.mit.edu 36 X 69540606 69540606 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012310 exon24 c.G2787T p.E929D . . . GDPD2 54857 broad.mit.edu 36 X 69569632 69569632 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171193 exon15 c.A1354G p.T452A . . . DLG3 1741 broad.mit.edu 36 X 69629118 69629118 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021120 exon12 c.C1720T p.R574X . . . TEX11 56159 broad.mit.edu 36 X 70009819 70009819 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003811 exon5 c.A268C p.N90H . . . SLC7A3 84889 broad.mit.edu 36 X 70063912 70063912 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032803 exon8 c.T1231C p.S411P . . . SLC7A3 84889 broad.mit.edu 36 X 70064447 70064447 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032803 exon6 c.G969T p.E323D . . . SLC7A3 84889 broad.mit.edu 36 X 70064522 70064522 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032803 exon6 c.G894A p.A298A . . . ZMYM3 9203 broad.mit.edu 36 X 70380543 70380543 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_001171162 exon21 c.G3257A p.R1086H . . . TAF1 6872 broad.mit.edu 36 X 70524881 70524881 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138923 exon16 c.A2494C p.K832Q . . . TAF1 6872 broad.mit.edu 36 X 70535191 70535191 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138923 exon24 c.G3662A p.R1221Q . . . FLJ44635 392490 broad.mit.edu 36 X 71296637 71296637 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207422 exon2 c.T233C p.V78A . . . STS 412 broad.mit.edu 36 X 7181331 7181331 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000351 exon2 c.G106A p.D36N . . . KIAA2022 340533 broad.mit.edu 36 X 73877600 73877600 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008537 exon3 c.T3517C p.S1173P . . . ABCB7 22 broad.mit.edu 36 X 74207037 74207037 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004299 exon10 c.T1256G p.F419C . . . CYSLTR1 10800 broad.mit.edu 36 X 77415012 77415012 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006639 exon3 c.C888A p.F296L . . . LPAR4 2846 broad.mit.edu 36 X 77897456 77897456 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_005296 exon2 c.G434A p.R145Q . . . LPAR4 2846 broad.mit.edu 36 X 77897708 77897708 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005296 exon2 c.G686A p.R229K . . . P2RY10 27334 broad.mit.edu 36 X 78103465 78103465 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198333 exon2 c.T792G p.I264M . . . TBX22 50945 broad.mit.edu 36 X 79173018 79173018 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001109878 exon9 c.T1315C p.S439P . . . HDX 139324 broad.mit.edu 36 X 83611073 83611073 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177479 exon4 c.T314C p.V105A . . . POF1B 79983 broad.mit.edu 36 X 84447880 84447880 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024921 exon12 c.G1280A p.R427H . . . KLHL4 56062 broad.mit.edu 36 X 86806533 86806533 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057162 exon10 c.G2039A p.G680E . . . FAM9B 171483 broad.mit.edu 36 X 8960419 8960419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205849 exon2 c.G112A p.E38K . . . PCDH11X 27328 broad.mit.edu 36 X 91343048 91343048 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon3 c.C3052T p.R1018X . . . PCDH11X 27328 broad.mit.edu 36 X 91760245 91760245 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon7 c.C3694A p.H1232N . . . NAP1L3 4675 broad.mit.edu 36 X 92813938 92813938 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004538 exon1 c.C1022T p.S341L . . . NAP1L3 4675 broad.mit.edu 36 X 92814675 92814675 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004538 exon1 c.T285G p.N95K . . . RPA4 29935 broad.mit.edu 36 X 96026521 96026521 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013347 exon1 c.G556A p.E186K . . . DIAPH2 1730 broad.mit.edu 36 X 96078994 96078994 + Missense_Mutation SNP G A A rs41300144 unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006729 exon11 c.G1196A p.R399Q . . . TSPAN6 7105 broad.mit.edu 36 X 99777346 99777346 + Silent SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003270 exon2 c.G141A p.E47E . . . USP9Y 8287 broad.mit.edu 36 Y 13462365 13462365 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004654 exon37 c.A6124G p.T2042A . . . UTY 7404 broad.mit.edu 36 Y 14091488 14091488 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007125 exon3 c.G232A p.E78K . . . ZFY 7544 broad.mit.edu 36 Y 2889685 2889685 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003411 exon3 c.C632T p.S211L . . .