Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
SPATA31A6	389730	hgsc.bcm.edu	37	9	43627977	43627977	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001145196	exon4	c.711delA	p.P237fs	TGAGATGGAGTTA	.	126	21	114	0	.	.
SPATA31A2	642265	hgsc.bcm.edu	37	9	39887722	39887722	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001040065	exon4	c.708delT	p.T236fs	ATAACTCCATCTC	.	114	15	119	0	.	.
SPATA31A2	642265	hgsc.bcm.edu	37	9	39358471	39358471	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001040065	exon4	c.708delT	p.T236fs	ATAACTCCATCTC	.	108	11	95	0	.	.
MUC4	4585	hgsc.bcm.edu	37	3	195515367	195515414	+	In_Frame_Del	DEL	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_018406	exon2	c.3038_3085del	p.1013_1029del	AGTGTCGGTGACA	.	67	0	52	0	.	.
MAP3K15	389840	hgsc.bcm.edu	37	X	19378938	19378938	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001001671	exon29	c.3872delG	p.C1291fs	GTCTGCAGAGGAG	.	28	11	10	3	.	.
GIGYF2	26058	hgsc.bcm.edu	37	2	233712228	233712230	+	In_Frame_Del	DEL	CAG	CAG	-	rs376678075		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	CAG	CAG	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.,9	.	NM_001103147	exon29	c.3693_3695del	p.1231_1232del	CTGCCACAGCAGC	.	57	0	36	0	.	288
SPTBN4	57731	hgsc.bcm.edu	37	19	40993696	40993696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_020971	exon3	c.G262T	p.D88Y	TATGTGGACCTCC	.	88	4	89	0	.	.
NRXN1	9378	hgsc.bcm.edu	37	2	50723152	50723152	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001135659	exon16	c.G3081A	p.Q1027Q	GTGCCACTGATTG	.	89	4	70	0	.	.
TMPRSS3	64699	hgsc.bcm.edu	37	21	43803308	43803308	+	Splice_Site	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	TMPRSS3,NS,carcinoma,0,2	TMPRSS3	NM_024022	exon9	c.617-1G>T	.	CACAGGCTATGGA	.	34	2	32	2	.	0
ARMC12	221481	hgsc.bcm.edu	37	6	35715084	35715084	+	Missense_Mutation	SNP	C	C	T	rs372805979		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	C6orf81,colon,carcinoma,-1,3	C6orf81	NM_145028	exon4	c.C572T	p.T191M	GGGACACGGAACT	.	45	2	28	0	.	-1
NTRK3	4916	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	88690583	88690583	+	Silent	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	NTRK3_ENST00000360948,caecum,carcinoma,-1,3	NTRK3_ENST00000360948	NM_001243101	exon6	c.G447T	p.T149T	ACTCAGCGTCTGG	.	32	12	23	0	.	-1
PCDHGA10	56106	hgsc.bcm.edu	37	5	140795103	140795103	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_032090	exon1	c.G2361T	p.E787D	CCAGGAGAGCTGT	.	97	4	101	0	.	.
KIF5A	3798	hgsc.bcm.edu;bcgsc.ca	37	12	57960966	57960966	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_004984	exon7	c.G559T	p.G187W	GATGAAGGGAAAT	.	71	4	40	0	.	.
FLJ42102	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	71118801	71118801	+	RNA	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	ACAGATGAGGGGC	.	28	12	20	0	.	.
MST1	4485	hgsc.bcm.edu	37	3	49725198	49725198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	MST1,trunk,malignant_melanoma,0,1	MST1	NM_020998	exon2	c.C227T	p.P76L	ATTAAGGGCCCAC	.	61	4	42	0	.	0
CHST4	10164	hgsc.bcm.edu	37	16	71571735	71571735	+	Silent	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001166395	exon2	c.C1155A	p.I385I	GCAAATCCACTAA	.	37	4	37	0	.	.
KNCN	148930	hgsc.bcm.edu	37	1	47013133	47013133	+	RNA	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GAAAGGCCAGGGC	.	69	4	46	0	.	.
BRPF1	7862	hgsc.bcm.edu	37	3	9785550	9785550	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	BRPF1,colon,carcinoma,0,1	BRPF1	NM_001003694	exon8	c.C2600T	p.A867V	ATAGTGCGGCAGA	.	40	2	26	0	.	0
CAPN13	92291	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	31010106	31010106	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_144575	exon2	c.T86A	p.L29Q	ATGCTCAGGCAGT	.	52	4	31	0	.	.
GUSBP4	375513	hgsc.bcm.edu	37	6	58260148	58260148	+	RNA	SNP	T	T	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	AAAATATTTACAT	.	205	13	141	0	.	.
PODNL1	79883	hgsc.bcm.edu	37	19	14044766	14044766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PODNL1,colon,carcinoma,0,1	PODNL1	NM_024825	exon7	c.G713A	p.R238H	GTCTGGCGGCTCA	.	34	3	33	0	.	0
TNFSF13B	10673	hgsc.bcm.edu	37	13	108955854	108955854	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_006573	exon5	c.A647G	p.K216R	GGAAGAAGGTCCA	.	92	4	82	0	.	.
PKHD1L1	93035	hgsc.bcm.edu	37	8	110491815	110491815	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PKHD1L1,NS,carcinoma,+1,1	PKHD1L1	NM_177531	exon54	c.G9125T	p.R3042L	CATCACGAGAAAA	.	61	3	30	0	.	+1
ATP12A	479	hgsc.bcm.edu	37	13	25274914	25274914	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	ATP12A,NS,carcinoma,0,1	ATP12A	NM_001185085	exon13	c.G1753T	p.E585X	GCAGACGAGTTTC	.	39	2	46	0	.	0
XYLT1	64131	hgsc.bcm.edu	37	16	17228428	17228428	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_022166	exon9	c.C1929T	p.S643S	GCTCAGGCTGTGG	.	72	4	31	0	.	.
UGGT1	56886	hgsc.bcm.edu	37	2	128884954	128884954	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	UGGT1,NS,carcinoma,0,1	UGGT1	NM_020120	exon12	c.G1154T	p.G385V	CTTTAGGATTACA	.	85	4	67	0	.	0
FBP1	2203	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	97367846	97367846	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000507	exon6	c.C718G	p.P240A	CATAAGGAGCTGA	.	62	26	54	0	.	.
LONP2	83752	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	48333669	48333669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_031490	exon10	c.C1631T	p.P544L	AGATACCCCAGGT	.	31	10	34	0	.	.
GPATCH1	55094	hgsc.bcm.edu;broad.mit.edu	37	19	33581730	33581730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_018025	exon3	c.G253T	p.D85Y	AGAGCAGACAAAT	.	80	4	71	0	.	.
RARA	5914	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	38510560	38510560	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RARA,colon,carcinoma,0,1	RARA	NM_000964	exon7	c.C814T	p.R272W	ATCCTGCGGATCT	.	46	18	34	0	.	0
HMGB3	3149	hgsc.bcm.edu;bcgsc.ca	37	X	150156360	150156360	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_005342	exon5	c.G576A	p.E192E	AGAAGAGGAGGAG	.	43	4	37	0	.	.
ODF1	4956	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	103564207	103564207	+	Silent	SNP	A	A	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_024410	exon1	c.A252G	p.R84R	TCTGCGACCATCT	.	39	15	33	0	.	.
RAD50	10111	hgsc.bcm.edu	37	5	131927041	131927041	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RAD50_ENST00000265335,NS,carcinoma,0,2	RAD50_ENST00000265335	NM_005732	exon10	c.G1578T	p.E526D	GATGGAGCAGTTA	.	41	2	29	0	.	0
VWA5B1	127731	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	20672037	20672037	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001039500	exon17	c.C2715A	p.D905E	TGTGGACGTGAGC	.	48	16	41	0	.	.
FER1L6	654463	hgsc.bcm.edu	37	8	124989720	124989720	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	FER1L6,NS,lymphoid_neoplasm,0,1	FER1L6	NM_001039112	exon10	c.G934T	p.E312X	TTCAAGGAAATGT	.	35	2	51	0	.	0
MLL5	55904	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	104719314	104719314	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_018682	exon11	c.C1152T	p.F384F	GTTATTCTACTCT	.	71	33	69	0	.	.
RUNX2	860	hgsc.bcm.edu	37	6	45390463	45390463	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RUNX2_ENST00000352853,NS,carcinoma,0,2	RUNX2_ENST00000352853	NM_001024630	exon3	c.G192A	p.Q64Q	GCAGCAGCAACAG	.	39	2	29	0	.	0
KCNC2	3747	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	75436135	75436135	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_139136	exon5	c.C1800T	p.V600V	AGTAATGACAACC	.	55	21	33	0	.	.
THAP9	79725	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	83839757	83839757	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_024672	exon5	c.T2392C	p.Y798H	GAATTGTATCTTC	.	20	7	17	0	.	.
IKBIP	121457	hgsc.bcm.edu;bcgsc.ca	37	12	99020313	99020313	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_153687	exon3	c.G529A	p.A177T	GTTTTGCTTCTGA	.	39	4	38	0	.	.
ZNF430	80264	hgsc.bcm.edu	37	19	21240159	21240159	+	Missense_Mutation	SNP	G	G	C	rs371234614	alternate_allele	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	ZNF430,pharynx,carcinoma,0,1	ZNF430	NM_025189	exon5	c.G1045C	p.E349Q	TGTGAAGAATGTG	.	50	2	49	0	.	0
KCNN3	3782	hgsc.bcm.edu	37	1	154842238	154842238	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001204087	exon1	c.A203T	p.Q68L	TGCTGCTGCTGAA	.	36	6	31	0	.	.
PDE1B	5153	hgsc.bcm.edu;bcgsc.ca	37	12	54970441	54970441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000924	exon14	c.G1463A	p.R488H	TCAAGCGCATTCA	.	38	4	26	0	.	.
PIK3C3	5289	hgsc.bcm.edu	37	18	39629497	39629497	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_002647	exon21	c.G2191T	p.G731X	GCAGCTGGATATT	.	88	4	78	0	.	.
LGI3	203190	hgsc.bcm.edu	37	8	22005731	22005731	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	LGI3,NS,carcinoma,0,1	LGI3	NM_139278	exon8	c.C1589A	p.P530H	AAGCTGGGGGCCA	.	29	2	29	0	.	0
IMPG2	50939	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	100951689	100951689	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_016247	exon15	c.C3169A	p.Q1057K	CAGGCTGTAGGTC	.	47	4	44	0	.	.
PFKP	5214	hgsc.bcm.edu	37	10	3149416	3149416	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PFKP_ENST00000381075,colon,carcinoma,0,2	PFKP_ENST00000381075	NM_002627	exon8	c.G785A	p.R262Q	GTGCCCGGAAAAA	.	64	3	52	0	.	0
RIN2	54453	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	19956130	19956130	+	Silent	SNP	C	C	T	rs368824899		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RIN2_ENST00000255006,NS,carcinoma,0,2	RIN2_ENST00000255006	NM_001242581	exon8	c.C1608T	p.F536F	CTCCTTCGTGCTG	.	47	20	28	0	.	0
HEXA	3073	hgsc.bcm.edu	37	15	72648952	72648952	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	HEXA,NS,carcinoma,0,1	HEXA	NM_000520	exon2	c.G260T	p.R87L	GTATGCCGTTTCC	.	27	2	18	0	.	0
PDZD2	23037	hgsc.bcm.edu	37	5	32071524	32071524	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_178140	exon15	c.G2568A	p.K856K	AAAAAAGGTGAGT	.	90	4	90	0	.	.
TTN	7273	hgsc.bcm.edu;bcgsc.ca	37	2	179529380	179529380	+	Splice_Site	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001267550	exon168	c.36202+1G>A	.	GATATACCTTCAT	.	86	4	75	0	.	.
DMXL2	23312	hgsc.bcm.edu	37	15	51778485	51778485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001174116	exon23	c.G5267A	p.R1756H	TATAAACGGGCAA	.	81	2	99	0	.	.
TXNDC16	57544	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	52978009	52978009	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_020784	exon9	c.G705A	p.L235L	TGTAGTCAATGGC	.	59	25	55	0	.	.
ME1	4199	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	83937111	83937111	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_002395	exon11	c.G1218C	p.L406F	ATTACTCAAAGCA	.	75	33	79	0	.	.
MIR3132	100423039	hgsc.bcm.edu;ucsc.edu	37	2	220413803	220413803	+	RNA	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	TGGGATGAGAGAG	.	17	9	16	0	.	.
ITPR2	3709	hgsc.bcm.edu	37	12	26709212	26709212	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	ITPR2,NS,carcinoma,0,1	ITPR2	NM_002223	exon36	c.C4918T	p.P1640S	CCTCAGGGAACAG	.	42	2	32	0	.	0
MTR	4548	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	237049616	237049616	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000254	exon27	c.C2800G	p.Q934E	TTAAGTCAAGCCA	.	58	20	66	0	.	.
EBF2	64641	hgsc.bcm.edu	37	8	25716016	25716016	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	EBF2,larynx,carcinoma,0,1	EBF2	NM_022659	exon14	c.C1347A	p.Y449X	GCGGATGTACCCT	.	57	3	30	0	.	0
APPL1	26060	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	57283498	57283498	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_012096	exon11	c.T974G	p.I325R	TGGACATAGACAA	.	97	6	60	0	.	.
IQSEC1	9922	hgsc.bcm.edu	37	3	12942851	12942851	+	Splice_Site	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.,1	.	NM_001134382	exon15	c.2976+1G>C	.	GGGTGGCCAGGGC	.	5	2	9	1	.	88
SIRPD	128646	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	1532442	1532442	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_178460	exon2	c.G316C	p.E106Q	AGATTTCACGGAT	.	69	32	82	0	.	.
DNASE1L3	1776	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	58190532	58190532	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_004944	exon4	c.G397C	p.E133Q	AGGGCTCCCTGGA	.	51	23	58	0	.	.
LIPA	3988	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	90974598	90974598	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000235	exon10	c.G1187A	p.R396K	TATTTCCTCATTA	.	69	4	68	0	.	.
GUCY2C	2984	hgsc.bcm.edu	37	12	14849213	14849213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	GUCY2C,NS,carcinoma,0,1	GUCY2C	NM_004963	exon1	c.C170T	p.A57V	TTCACCGCATCTT	.	32	2	34	0	.	0
ANXA6	309	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	150484839	150484839	+	Silent	SNP	G	G	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001155	exon24	c.C1806G	p.L602L	AAAGAAGAGAGGC	.	30	11	51	0	.	.
SLC16A14	151473	hgsc.bcm.edu	37	2	230914527	230914527	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_152527	exon3	c.C353T	p.A118V	GCATAGGCACTCA	.	87	4	75	0	.	.
RNF103	7844	hgsc.bcm.edu;bcgsc.ca	37	2	86831626	86831626	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_005667	exon4	c.C1398A	p.L466L	GTGGAAGAGGTAG	.	40	4	33	0	.	.
DNA2	1763	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	70206164	70206164	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001080449	exon7	c.C946T	p.L316L	TGTACAGAACAAC	.	95	44	61	0	.	.
CUL7	9820	hgsc.bcm.edu	37	6	43007936	43007936	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	CUL7,NS,carcinoma,0,1	CUL7	NM_001168370	exon22	c.C4504A	p.L1502M	CCCTCAGGTAGGA	.	50	2	27	0	.	0
TXNDC2	84203	hgsc.bcm.edu	37	18	9886918	9886918	+	Missense_Mutation	SNP	A	A	G	rs142946305	bycluster	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	TXNDC2_ENST00000306084,NS,carcinoma,0,4	TXNDC2_ENST00000306084	NM_001098529	exon2	c.A442G	p.N148D	GAGAGTAACATCC	.	87	2	93	1	0.000	0
GRB2	2885	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	73317898	73317898	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_002086	exon5	c.G310A	p.D104N	GCACATCGTTTCC	.	18	9	17	0	.	.
RASSF10	644943	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	11	13031684	13031684	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001080521	exon1	c.C561T	p.L187L	CAAGCTCAACCGG	.	65	28	66	0	.	.
TEK	7010	hgsc.bcm.edu	37	9	27158032	27158032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000459	exon2	c.G256T	p.V86F	AAAAAAGTTGTTT	.	99	4	63	0	.	.
PCDHGA3	56112	hgsc.bcm.edu	37	5	140725547	140725547	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PCDHGA3_ENST00000253812,NS,carcinoma,0,1	PCDHGA3_ENST00000253812	NM_032011	exon1	c.C1947T	p.H649H	GGACCACGGCCAG	.	84	9	45	1	.	0
KIAA0907	22889	hgsc.bcm.edu	37	1	155896523	155896523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	KIAA0907,NS,carcinoma,0,1	KIAA0907	NM_014949	exon6	c.G625A	p.A209T	TGGGTGCTGGCTG	.	75	3	67	0	.	0
AGL	178	hgsc.bcm.edu	37	1	100346961	100346961	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	AGL,NS,carcinoma,0,1	AGL	NM_000644	exon16	c.C2115T	p.I705I	TGCTATCAGTAAA	.	36	2	45	0	.	0
TM4SF4	7104	hgsc.bcm.edu	37	3	149216522	149216522	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	TM4SF4,NS,carcinoma,0,1	TM4SF4	NM_004617	exon4	c.G415T	p.D139Y	CTCAATGATGAGG	.	41	2	51	0	.	0
SLC4A10	57282	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	162807340	162807340	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001178015	exon19	c.G2523A	p.R841R	CAACAGGAAAGAG	.	67	30	68	0	.	.
AKAP9	10142	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	7	91729135	91729135	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_005751	exon44	c.G10848A	p.L3616L	GAAGCTGGAAGAG	.	40	4	29	0	.	.
STBD1	8987	hgsc.bcm.edu	37	4	77230789	77230789	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	STBD1,NS,carcinoma,0,1	STBD1	NM_003943	exon2	c.C713T	p.T238I	GAAGCACTTTGGT	.	47	2	25	0	.	0
MYO5B	4645	hgsc.bcm.edu	37	18	47405423	47405423	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001080467	exon24	c.G3168C	p.M1056I	TTTCTTCATGAGA	.	60	6	55	0	.	.
DNAH5	1767	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	13753419	13753419	+	Missense_Mutation	SNP	G	G	T	rs202232031	alternate_allele	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	DNAH5,NS,malignant_melanoma,0,1	DNAH5	NM_001369	exon63	c.C10795A	p.R3599S	GGTAACGAGATGC	.	57	4	35	0	.	0
LYST	1130	hgsc.bcm.edu	37	1	235972607	235972607	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	LYST,NS,carcinoma,0,1	LYST	NM_000081	exon5	c.G1511A	p.C504Y	TATTCACATCGTC	.	31	2	30	0	.	0
RPGRIP1L	23322	hgsc.bcm.edu	37	16	53726057	53726057	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RPGRIP1L,NS,carcinoma,0,1	RPGRIP1L	NM_001127897	exon4	c.C450A	p.Y150X	ATTATTGTATGGA	.	65	3	47	0	.	0
CREB3L1	90993	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	46321678	46321678	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_052854	exon2	c.C295A	p.P99T	CAGAGCCCCCTTG	.	28	11	34	0	.	.
POTEF	728378	hgsc.bcm.edu	37	2	130832762	130832762	+	Silent	SNP	T	T	C	rs2599797		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	POTEF,NS,carcinoma,0,1	POTEF	NM_001099771	exon17	c.A2283G	p.K761K	GCCTCTTTTGCTC	.	54	3	63	2	.	0
MIR3132	100423039	hgsc.bcm.edu;ucsc.edu	37	2	220413845	220413845	+	RNA	SNP	G	G	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	TCCTCTGAGCTCC	.	23	12	27	0	.	.
HORMAD2	150280	hgsc.bcm.edu	37	22	30518061	30518061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	HORMAD2,colon,carcinoma,0,1	HORMAD2	NM_152510	exon10	c.G677T	p.G226V	CCACTGGCTTTCA	.	47	2	51	0	.	0
CES5A	221223	hgsc.bcm.edu	37	16	55880742	55880742	+	Silent	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	CES5A_ENST00000521992,NS,carcinoma,-1,2	CES5A_ENST00000521992	NM_001190158	exon13	c.G1521T	p.T507T	CTCCTCCGTGGCT	.	24	2	25	0	.	-1
ZNF516	9658	hgsc.bcm.edu	37	18	74090965	74090965	+	Silent	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_014643	exon4	c.G3105C	p.A1035A	GGGGGGCGCCCCA	.	48	5	47	0	.	.
ESPNP	284729	hgsc.bcm.edu	37	1	17020257	17020257	+	RNA	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	CGTGGAGATCTTG	.	19	6	20	0	.	.
LDOC1L	84247	hgsc.bcm.edu	37	22	44893393	44893393	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	LDOC1L,caecum,carcinoma,0,1	LDOC1L	NM_032287	exon2	c.C44A	p.A15E	GACGCTGCCAAGG	.	48	2	32	0	.	0
ZNF430	80264	hgsc.bcm.edu	37	19	21240049	21240049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_025189	exon5	c.C935T	p.T312I	TTCATACTGGAGA	.	64	4	27	0	.	.
ARID1A	8289	hgsc.bcm.edu	37	1	27106011	27106011	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_006015	exon20	c.C5622T	p.C1874C	ACCCTGCCCACCA	.	95	4	64	0	.	.
KAT2A	2648	hgsc.bcm.edu	37	17	40266620	40266620	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	KAT2A,NS,carcinoma,0,1	KAT2A	NM_021078	exon14	c.C2022A	p.I674I	CTTGATGATCTGA	.	22	2	26	0	.	0
IFIT5	24138	hgsc.bcm.edu;broad.mit.edu	37	10	91177164	91177164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	IFIT5,colon,carcinoma,0,1	IFIT5	NM_012420	exon2	c.G208A	p.A70T	AAAGACGCCCTTG	.	40	5	26	0	.	0
PDE6C	5146	hgsc.bcm.edu	37	10	95400207	95400207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PDE6C,NS,carcinoma,0,1	PDE6C	NM_006204	exon13	c.G1630T	p.V544F	TTTTAGGTTCTTA	.	72	3	52	0	.	0
DCT	1638	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	95131418	95131418	+	Missense_Mutation	SNP	G	G	A	rs375600704		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	DCT_ENST00000446125,caecum,carcinoma,0,6	DCT_ENST00000446125	NM_001129889	exon1	c.C92T	p.T31M	TCCACCGTCATGC	.	38	24	30	0	.	0
LAMA4	3910	hgsc.bcm.edu	37	6	112463373	112463373	+	Missense_Mutation	SNP	G	G	T	rs375497091	alternate_allele	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	LAMA4,NS,carcinoma,0,1	LAMA4	NM_001105206	exon20	c.C2615A	p.P872Q	AGTTCCGGCCGCT	.	57	2	58	0	.	0
RB1CC1	9821	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	53554933	53554933	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001083617	exon18	c.G4315C	p.E1439Q	TTGTCTCCATTGC	.	31	16	32	0	.	.
STAT2	6773	hgsc.bcm.edu	37	12	56743970	56743970	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	STAT2,NS,carcinoma,0,1	STAT2	NM_005419	exon13	c.C1120A	p.R374R	ACTTCCGGAAGCT	.	56	3	29	0	.	0
RNF213	57674	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	78325495	78325495	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001256071	exon32	c.A10195G	p.I3399V	TCTGTTATAAATG	.	139	60	109	0	.	.
MIR602	693187	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	140732875	140732875	+	RNA	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	CCTTCTCACCCCC	.	78	32	58	0	.	.
MYO5B	4645	hgsc.bcm.edu	37	18	47405425	47405425	+	Missense_Mutation	SNP	T	T	G	rs200219597	bycluster	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	MYO5B,NS,carcinoma,0,1	MYO5B	NM_001080467	exon24	c.A3166C	p.M1056L	TCTTCATGAGATT	.	59	1	55	0	.	0
ZFP62	643836	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	180277777	180277777	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001172638	exon2	c.C718G	p.L240V	GGTCCAGAACAGA	.	38	16	28	0	.	.
PCDH20	64881	hgsc.bcm.edu	37	13	61985616	61985616	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_022843	exon2	c.C2616A	p.I872I	TATTGAGATTTGT	.	51	4	33	0	.	.
TXNDC2	84203	hgsc.bcm.edu	37	18	9886915	9886915	+	Missense_Mutation	SNP	A	A	G	rs376867565		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	TXNDC2_ENST00000306084,NS,carcinoma,0,2	TXNDC2_ENST00000306084	NM_001098529	exon2	c.A439G	p.S147G	AAAGAGAGTAACA	.	90	2	92	1	.	0
OGFR	11054	hgsc.bcm.edu	37	20	61444660	61444660	+	Missense_Mutation	SNP	C	C	A	rs61743079	bycluster	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	OGFR,NS,neuroblastoma,0,1	OGFR	NM_007346	exon7	c.C1693A	p.R565S	GGCCCCCGCCCGG	.	28	4	18	1	0.019	0
SLC25A26	115286	hgsc.bcm.edu;bcgsc.ca	37	3	66312519	66312519	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_173471	exon5	c.G345T	p.R115S	GCAGAGGGCACAG	.	70	4	64	0	.	.
FAM71B	153745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	156590618	156590618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	FAM71B,NS,carcinoma,0,1	FAM71B	NM_130899	exon2	c.C658A	p.P220T	CACAAGGCTTGTA	.	26	7	22	0	.	0
XKR3	150165	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	17288751	17288751	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_175878	exon2	c.C213T	p.I71I	AAAGCTGATGGTA	.	93	32	75	0	.	.
TDRD10	126668	hgsc.bcm.edu	37	1	154493819	154493819	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_182499	exon6	c.G233T	p.G78V	ATCTGGGCTCCAT	.	37	3	44	0	.	.
TENM3	55714	hgsc.bcm.edu	37	4	183714515	183714515	+	Silent	SNP	C	C	T	rs369647107		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	ODZ3,NS,carcinoma,0,1	ODZ3	NM_001080477	exon25	c.C6690T	p.D2230D	TTATGACGGCCTG	.	36	3	25	0	.	0
ZFP69	339559	hgsc.bcm.edu;bcgsc.ca	37	1	40945074	40945074	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_198494	exon2	c.G41A	p.S14N	AGGCCAGCACCTG	.	39	4	27	0	.	.
LRRIQ3	127255	hgsc.bcm.edu;bcgsc.ca	37	1	74648427	74648427	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001105659	exon3	c.C368A	p.T123N	ATGAGGGTTGGAC	.	100	4	90	0	.	.
C2orf42	54980	hgsc.bcm.edu	37	2	70392715	70392715	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_017880	exon7	c.G1197A	p.L399L	TTGTTGCAGGGCA	.	101	4	77	0	.	.
MAML3	55534	hgsc.bcm.edu	37	4	140811120	140811120	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	MAML3_ENST00000509479,colon,carcinoma,0,2	MAML3_ENST00000509479	NM_018717	exon2	c.G1470A	p.Q490Q	CTGCTGCTGTTGC	.	14	3	14	0	.	0
FAM194A	131831	hgsc.bcm.edu	37	3	150421519	150421519	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	FAM194A,NS,carcinoma,0,1	FAM194A	NM_152394	exon1	c.T167A	p.V56E	TCCTCCACCACCT	.	12	3	10	1	.	0
NWD1	284434	hgsc.bcm.edu	37	19	16855309	16855309	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001007525	exon5	c.C276T	p.D92D	GAGGGACCATCTG	.	52	4	33	0	.	.
PCSK1	5122	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	95746636	95746636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000439	exon8	c.C937A	p.Q313K	CTCCCTGACGCCC	.	65	4	53	0	.	.
F12	2161	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	176832069	176832069	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000505	exon6	c.G515A	p.R172Q	GCCAGCCGCTGGC	.	29	7	26	0	.	.
OR8K3	219473	hgsc.bcm.edu	37	11	56086520	56086520	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	OR8K3,caecum,carcinoma,0,1	OR8K3	NM_001005202	exon1	c.G738A	p.V246V	GACAGTGGTCATA	.	43	2	33	0	.	0
WDR60	55112	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	158704268	158704268	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_018051	exon12	c.C1488T	p.L496L	TCGGCTCATTGAC	.	76	30	51	0	.	.
KIR3DX1	90011	hgsc.bcm.edu	37	19	55044296	55044296	+	RNA	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	KIR3DX1,NS,carcinoma,+1,1	KIR3DX1	.	.	.	.	ACATGCGGGTGAG	.	24	2	17	0	.	+1
DCHS2	54798	hgsc.bcm.edu	37	4	155312413	155312413	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	DCHS2,right_upper_lobe,carcinoma,0,1	DCHS2	NM_017639	exon1	c.G37T	p.D13Y	CTCCGTCTTCATT	.	39	2	46	0	.	0
SLC15A5	729025	hgsc.bcm.edu;bcgsc.ca	37	12	16369928	16369928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001170798	exon7	c.G1382A	p.S461N	ACATTGCTTGGAA	.	61	4	47	0	.	.
VCPIP1	80124	hgsc.bcm.edu	37	8	67577658	67577658	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	VCPIP1,NS,carcinoma,0,1	VCPIP1	NM_025054	exon1	c.G1536T	p.L512F	ATTGTTCAAGGGA	.	49	2	49	0	.	0
UFC1	51506	hgsc.bcm.edu	37	1	161123896	161123896	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_016406	exon1	c.C109T	p.Q37X	GAATATCAGTCCC	.	82	4	43	0	.	.
ASB16	92591	hgsc.bcm.edu	37	17	42248325	42248325	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_080863	exon1	c.C168T	p.C56C	TTCCTGCCGAGAC	.	80	3	59	0	.	.
TPTE2	93492	hgsc.bcm.edu	37	13	20056679	20056679	+	Missense_Mutation	SNP	T	T	G	rs200244531		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	TPTE2_ENST00000400230,NS,carcinoma,0,1	TPTE2_ENST00000400230	NM_199254	exon5	c.A128C	p.E43A	AGTCGTTCTAACA	.	78	4	57	0	.	0
GSDMC	56169	hgsc.bcm.edu	37	8	130777904	130777904	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	GSDMC,NS,malignant_melanoma,0,2	GSDMC	NM_031415	exon4	c.G540A	p.G180G	AATTTTCCCTAAA	.	47	2	46	0	.	0
GUSBP2	387036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	26892922	26892922	+	RNA	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	AAGGCTGGTTTTA	.	285	101	232	0	.	.
LRRIQ1	84125	hgsc.bcm.edu;bcgsc.ca	37	12	85547524	85547524	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	LRRIQ1_ENST00000393217,caecum,carcinoma,0,1	LRRIQ1_ENST00000393217	NM_001079910	exon22	c.T4625A	p.I1542N	AAAAAATTTCAGA	.	74	5	58	0	.	0
WDR90	197335	hgsc.bcm.edu	37	16	703802	703802	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	WDR90,bladder,carcinoma,0,1	WDR90	NM_145294	exon13	c.C1436T	p.T479M	GGAGGACGGTAAC	.	38	2	29	0	.	0
ADRA2A	150	hgsc.bcm.edu	37	10	112838890	112838890	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	ADRA2A,NS,carcinoma,+1,1	ADRA2A	NM_000681	exon1	c.G1136T	p.G379V	GGCGCGGGCGGCA	.	9	2	9	0	.	+1
NOS1	4842	hgsc.bcm.edu	37	12	117691478	117691478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	NOS1,NS,carcinoma,0,1	NOS1	NM_001204218	exon18	c.C2715A	p.D905E	AAAGTTGTCTCTG	.	27	2	28	0	.	0
C1RL	51279	hgsc.bcm.edu	37	12	7261802	7261802	+	RNA	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	ACCTGCGAGAGAA	.	25	5	21	0	.	.
OSGIN1	29948	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	83998838	83998838	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_182981	exon6	c.C660A	p.F220L	CCTCTTCCAGGTG	.	33	15	31	0	.	.
MCM8	84515	hgsc.bcm.edu;ucsc.edu	37	20	5974195	5974195	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_032485	exon18	c.G2284T	p.E762X	GATTTTGAGCGAT	.	40	4	25	0	.	.
ANKLE2	23141	hgsc.bcm.edu	37	12	133331415	133331415	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	ANKLE2,NS,carcinoma,0,1	ANKLE2	NM_015114	exon2	c.C486A	p.G162G	ATTCAGGCCCACA	.	65	3	48	0	.	0
MYO15A	51168	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	18023111	18023111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_016239	exon2	c.G997A	p.E333K	GGGTACGAGGGCG	.	120	51	74	0	.	.
CEP250	11190	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	34091510	34091510	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_007186	exon30	c.C5313T	p.L1771L	CAGCCTCCTCCTG	.	10	5	10	0	.	.
ABTB2	25841	hgsc.bcm.edu	37	11	34194737	34194737	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_145804	exon4	c.G1362A	p.L454L	AGGCAGCAGCAGC	.	77	4	89	0	.	.
RYR2	6262	hgsc.bcm.edu	37	1	237880647	237880647	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RYR2,NS,carcinoma,0,1	RYR2	NM_001035	exon72	c.G10473T	p.L3491L	TGCTCTGGCCAAA	.	73	3	42	0	.	0
AGBL3	340351	hgsc.bcm.edu	37	7	134719110	134719110	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	AGBL3,colon,carcinoma,0,1	AGBL3	NM_178563	exon7	c.G768T	p.W256C	TGGCTGGCAGAGA	.	43	2	60	0	.	0
AK8	158067	hgsc.bcm.edu	37	9	135668080	135668080	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	C9orf98_ENST00000298545,colon,carcinoma,0,2	C9orf98_ENST00000298545	NM_152572	exon11	c.C1062A	p.G354G	CGGGACGCCGTGT	.	68	3	45	0	.	0
RNF138	51444	hgsc.bcm.edu	37	18	29672848	29672848	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	RNF138,colon,carcinoma,0,1	RNF138	NM_198128	exon1	c.G109T	p.V37F	CAGCACGTGTGAG	.	50	2	39	0	.	0
COL7A1	1294	hgsc.bcm.edu;broad.mit.edu	37	3	48625832	48625832	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000094	exon20	c.G2593A	p.E865K	GAGCCTCAGGCGC	.	16	5	9	0	.	.
NBEAL1	65065	hgsc.bcm.edu;bcgsc.ca	37	2	204000456	204000456	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001114132	exon27	c.G3783T	p.V1261V	GCAAGTGGGTTGG	.	91	4	100	0	.	.
TNPO2	30000	hgsc.bcm.edu	37	19	12821525	12821525	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_013433	exon12	c.C1180A	p.H394N	GTAGGTGGGGCAG	.	85	4	67	0	.	.
IRAK2	3656	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	10268072	10268072	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001570	exon10	c.C1227T	p.L409L	GGTCCTCACGGGC	.	53	26	36	0	.	.
RAD21L1	642636	hgsc.bcm.edu;bcgsc.ca	37	20	1223483	1223483	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001136566	exon9	c.G1077T	p.L359L	TGAACTGAAAATG	.	75	4	70	0	.	.
ABCA10	10349	hgsc.bcm.edu	37	17	67212428	67212428	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_080282	exon8	c.C602A	p.S201X	GGGATTGATGTTA	.	98	5	54	0	.	.
GXYLT1	283464	hgsc.bcm.edu	37	12	42523639	42523639	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	GXYLT1,NS,carcinoma,0,1	GXYLT1	NM_173601	exon2	c.C236A	p.S79Y	CACAGAGAGAAAT	.	32	2	31	0	.	0
ARHGAP29	9411	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	94650575	94650575	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_004815	exon18	c.C1962T	p.V654V	AATAATGACTAAA	.	91	39	64	0	.	.
GABBR1	2550	hgsc.bcm.edu	37	6	29572676	29572676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	GABBR1,NS,carcinoma,0,1	GABBR1	NM_001470	exon21	c.C2529A	p.F843L	GGAGGAGAAAACT	.	48	2	34	0	.	0
GBF1	8729	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	104121537	104121537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001199378	exon14	c.G1554A	p.M518I	TGAGATGAAGGAG	.	41	13	26	0	.	.
SPTY2D1	144108	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	18636621	18636621	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_194285	exon3	c.G1200C	p.Q400H	GCCATTCTGGCGC	.	30	12	27	0	.	.
FAM73A	374986	hgsc.bcm.edu;bcgsc.ca	37	1	78338699	78338699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001270384	exon15	c.G1577T	p.G526V	CAGATGGATTTTT	.	98	4	97	0	.	.
SP100	6672	hgsc.bcm.edu	37	2	231314943	231314943	+	Missense_Mutation	SNP	C	C	A	rs368340530	alternate_allele	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	SP100_ENST00000340126,mouth,carcinoma,0,2	SP100_ENST00000340126	NM_001206702	exon8	c.C793A	p.P265T	GAGATGCCCTGCC	.	38	2	29	0	.	0
MYL7	58498	hgsc.bcm.edu	37	7	44179935	44179935	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	MYL7,trunk,malignant_melanoma,0,1	MYL7	NM_021223	exon4	c.G285A	p.G95G	CTTCTCCCCAAAG	.	36	2	37	0	.	0
LPCAT1	79888	hgsc.bcm.edu	37	5	1489863	1489863	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	LPCAT1,colon,carcinoma,0,1	LPCAT1	NM_024830	exon4	c.C604A	p.Q202K	TTACCTGTGGCCA	.	39	2	41	0	.	0
PCNXL2	80003	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	233270846	233270846	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_014801	exon21	c.C3750T	p.F1250F	GACAGTGAAGCTC	.	100	40	77	0	.	.
NKD1	85407	hgsc.bcm.edu	37	16	50664815	50664815	+	Missense_Mutation	SNP	C	C	T	rs200257763	bycluster	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	NKD1,colon,carcinoma,0,1	NKD1	NM_033119	exon8	c.C689T	p.P230L	GAGCCCCGCTCAG	.	29	2	20	0	.	0
IGF1R	3480	hgsc.bcm.edu	37	15	99460004	99460004	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_000875	exon10	c.C2100T	p.C700C	TTGCTGCGCCTGC	.	59	3	66	0	.	.
EDN2	1907	hgsc.bcm.edu;bcgsc.ca	37	1	41949743	41949743	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001956	exon2	c.G196A	p.D66N	TGATGTCCAAGTG	.	68	4	51	0	.	.
KRTAP4-2	85291	hgsc.bcm.edu	37	17	39334273	39334273	+	Silent	SNP	C	C	G	rs201015994		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	KRTAP4-2_ENST00000458321,NS,carcinoma,0,2	KRTAP4-2_ENST00000458321	NM_033062	exon1	c.G144C	p.P48P	GCACTGCGGTCTG	.	93	5	62	0	0.001	0
NHLRC1	378884	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	18122100	18122100	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_198586	exon1	c.C738T	p.F246F	TTCCGCGAAGTCG	.	56	13	43	0	.	.
MATN1-AS1	100129196	hgsc.bcm.edu;ucsc.edu	37	1	31192246	31192246	+	RNA	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	CCACCAGATGGCA	.	42	4	41	0	.	.
HEATR6	63897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	58148096	58148096	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	HEATR6,NS,carcinoma,0,1	HEATR6	NM_022070	exon6	c.G772A	p.E258K	CAAGTTCATCAGT	.	54	17	42	0	.	0
DST	667	hgsc.bcm.edu	37	6	56342186	56342186	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	DST_ENST00000370769,NS,carcinoma,0,2	DST_ENST00000370769	NM_015548	exon72	c.C13763A	p.T4588N	TTAATGGTAGTGA	.	75	3	53	0	.	0
SKA2	348235	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	57232319	57232319	+	Silent	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_001100595	exon1	c.C126A	p.L42L	TTACCCGAGGCGG	.	100	42	81	0	.	.
RGS11	8786	hgsc.bcm.edu	37	16	320814	320814	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	NM_183337	exon14	c.C996T	p.F332F	CTCCCAGAAGCTG	.	16	8	7	0	.	.
PADI6	353238	broad.mit.edu	37	1	17725151	17725154	+	RNA	DEL	CCCC	CCCC	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	PADI6	.	.	.	.	CCCCCGCCCCCCC	.	12	2	8	0	.	51
BEND3P3	0	broad.mit.edu	37	10	81443134	81443135	+	RNA	DEL	AC	AC	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	TGCTAAACACGTA	.	9	3	4	0	.	.
DHX37	57647	broad.mit.edu	37	12	125437072	125437072	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	DHX37	NM_032656	exon21	c.A2740G	p.M914V	GCTGCATCTTGGG	.	25	3	26	0	.	114
KRT8	3856	broad.mit.edu	37	12	53298675	53298675	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	KRT8,NS,carcinoma,0,5	KRT8	NM_001256282	exon2	c.T175G	p.S59A	TGCGGGAACCGGG	.	83	3	80	1	.	41
OTX2-AS1	0	broad.mit.edu	37	14	57280005	57280005	+	RNA	DEL	T	T	-	rs375495685	bycluster	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GGGGGGTGAAAGA	.	7	4	5	0	.	.
.	0	broad.mit.edu	37	15	82934831	82934831	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	TCACGTAGCCTCT	.	126	6	100	1	.	.
PKD1L2	114780	broad.mit.edu	37	16	81155069	81155069	+	RNA	DEL	A	A	-	rs377651946		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	PKD1L2	.	.	.	.	CATCTCAAAAAAA	.	6	2	4	0	.	361
PPL	5493	broad.mit.edu	37	16	4953901	4953901	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PPL,head_neck,malignant_melanoma,-2,1	PPL	NM_002705	exon3	c.C303A	p.D101E	GATCATGTCCCCC	.	59	3	62	0	.	168
TBC1D3P1-DHX40P1	0	broad.mit.edu	37	17	58066651	58066651	+	RNA	SNP	C	C	T	rs376360537		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GTAAAGCTGTTTA	.	64	4	53	1	.	.
.	374920	broad.mit.edu	37	19	48697909	48697909	+	Splice_Site	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	CCCGCAGGTGAAG	.	27	3	26	0	.	.
OLFM2	93145	broad.mit.edu	37	19	10047006	10047006	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	OLFM2	NM_058164	exon1	c.37delC	p.L13fs	ACAGCAGCAGCAG	.	6	2	7	0	.	42
STXBP2	6813	broad.mit.edu	37	19	7702047	7702048	+	Frame_Shift_Del	DEL	GG	GG	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	STXBP2	NM_006949	exon1	c.12_13del	p.4_5del	GCCCTCGGGGCTG	.	12	8	6	0	.	63
.	91646	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	33306507	33306507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	TGTGAAGAAAGCC	.	88	39	78	0	.	.
ALMS1P	0	broad.mit.edu	37	2	73901980	73901980	+	RNA	SNP	G	G	A	rs200040304		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	CTGGCTGTCCAGA	.	106	5	76	1	G|0.999;A|0.001	.
IFT52	51098	broad.mit.edu	37	20	42264632	42264632	+	Silent	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	IFT52	NM_016004	exon11	c.G990A	p.P330P	GACGCCGCTGCCA	.	32	3	31	0	.	40
ASCC2	84164	broad.mit.edu	37	22	30212002	30212002	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	ASCC2	NM_032204	exon6	c.T602C	p.I201T	TGAAGGATGGTAG	.	74	3	59	0	.	53
SMC1B	27127	broad.mit.edu	37	22	45795219	45795219	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	SMC1B	NM_148674	exon6	c.T869C	p.L290P	TTTAAAAGGGTTT	.	83	3	74	0	.	215
CCK	885	broad.mit.edu	37	3	42304951	42304951	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	CCK	NM_000729	exon4	c.C172A	p.L58M	CGCCCAGGTGCGC	.	37	3	26	0	.	15
.	0	broad.mit.edu	37	6	19614330	19614331	+	RNA	DEL	AT	AT	-	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	AGATAAATAAATA	.	15	2	9	0	.	.
PRSS3P2	0	broad.mit.edu	37	7	142482292	142482292	+	RNA	SNP	A	A	C	rs371485584		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	PRSS2,NS,carcinoma,0,3	.	.	.	.	.	GAAGAGAAGGCCT	.	42	7	16	0	.	.
LINC00092	0	broad.mit.edu	37	9	98782939	98782939	+	RNA	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GCAGATGATGGAA	.	8	3	10	0	.	.
FAM95B1	0	broad.mit.edu	37	9	43029805	43029805	+	RNA	SNP	C	C	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	CAGAACCACAGCC	.	64	5	45	1	.	.
ESX1	80712	broad.mit.edu	37	X	103495187	103495187	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	ESX1	NM_153448	exon4	c.G943T	p.G315W	GCGGCCCGGTTGG	.	12	3	11	0	.	57
WDR44	54521	broad.mit.edu	37	X	117480529	117480529	+	Silent	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	WDR44	NM_001184965	exon1	c.C63T	p.G21G	AGGGGGCGGCTAC	.	205	4	154	0	.	188
FAM131C	348487	ucsc.edu	37	1	16385007	16385007	+	Silent	SNP	C	C	T	rs28667975		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	FAM131C	NM_182623	exon7	c.G768A	p.G256G	GTGGGTCCCACCC	.	83	10	65	0	C|1.000;|0.000	21
TET3	200424	ucsc.edu	37	2	74274265	74274265	+	Silent	SNP	T	T	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	TET3	NM_144993	exon1	c.T816C	p.P272P	ATGGCCTGTGGTT	.	38	4	29	0	.	101
PRSS1	5644	ucsc.edu	37	7	142459667	142459667	+	Silent	SNP	G	G	A	rs142476093	bycluster	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	PRSS1	NM_002769	exon3	c.G243A	p.L81L	AGTCCTGGAGGGG	.	98	12	49	1	C|0.000;G|1.000	68
ZNF511	118472	ucsc.edu;bcgsc.ca	37	10	135123330	135123330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	ZNF511	NM_145806	exon3	c.C278T	p.A93V	TCGATGCCCTGGA	.	31	4	23	0	.	17
LAMA1	284217	ucsc.edu	37	18	7037680	7037680	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	LAMA1	NM_005559	exon12	c.C1634T	p.A545V	CCTAGTGCATCTT	.	40	4	27	0	.	458
NOTCH3	4854	ucsc.edu	37	19	15290252	15290252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	NOTCH3	NM_000435	exon21	c.C3383A	p.S1128Y	GGCTGGGAGGCAC	.	42	4	38	0	.	340
H6PD	9563	bcgsc.ca	37	1	9305083	9305083	+	Silent	SNP	G	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	H6PD	NM_004285	exon2	c.G90T	p.L30L	AATCCTGCTGGGA	.	18	3	18	0	.	71
ETV3L	440695	bcgsc.ca	37	1	157062558	157062558	+	Silent	SNP	G	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	ETV3L	NM_001004341	exon5	c.C969A	p.G323G	ATCCAGGCCTCCC	.	54	4	51	0	.	73
ABCB11	8647	bcgsc.ca	37	2	169792945	169792945	+	Splice_Site	SNP	T	C	C	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	T	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	ABCB11	NM_003742	exon23	c.2611-2A>G	.	GCAGCCTGCAAAC	.	55	4	48	0	.	136
AADAC	13	bcgsc.ca	37	3	151545859	151545859	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	AADAC	NM_001086	exon5	c.C1099A	p.H367N	CATAACCATGTTG	.	58	4	45	0	.	49
FAM65B	9750	bcgsc.ca	37	6	24836027	24836027	+	Silent	SNP	G	A	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	FAM65B	NM_014722	exon16	c.C2175T	p.T725T	CACACTGGTCCCA	.	69	4	48	0	.	134
KIF20B	9585	bcgsc.ca	37	10	91470854	91470854	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	KIF20B	NM_016195	exon6	c.G627T	p.E209D	ACAAGAGAAAGAA	.	160	5	142	0	.	191
RBMS2	5939	bcgsc.ca	37	12	56982715	56982715	+	Splice_Site	SNP	G	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	RBMS2	NM_002898	exon13	c.1144-1G>T	.	GGCACAGGAGAGC	.	48	4	46	0	.	29
.	400141	bcgsc.ca	37	13	67841448	67841448	+	RNA	SNP	C	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GGCGGTCAGCCCT	.	41	20	41	0	.	.
.	400141	bcgsc.ca	37	13	67841585	67841585	+	RNA	SNP	C	G	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GGCCCTCTGGCCA	.	30	12	27	0	.	.
FAM155A	728215	bcgsc.ca	37	13	108518801	108518801	+	Missense_Mutation	SNP	G	T	T	rs143077563	alternate_allele	TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	FAM155A,arm,malignant_melanoma,0,1	FAM155A	NM_001080396	exon1	c.C144A	p.F48L	GACTGTGAAAAAC	.	51	4	43	0	.	82
NID2	22795	bcgsc.ca	37	14	52535520	52535520	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	NID2	NM_007361	exon1	c.C193A	p.L65M	AGTGCAGGGGATT	.	61	4	49	0	.	201
.	400385	bcgsc.ca	37	15	71355572	71355572	+	RNA	SNP	C	G	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	TCTTTTCATAGAC	.	20	10	20	0	.	.
PRC1	9055	bcgsc.ca	37	15	91517385	91517385	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	PRC1	NM_199413	exon11	c.C1442A	p.T481K	CCCGGTGTATTGG	.	59	4	45	0	.	51
NARF	26502	bcgsc.ca	37	17	80443387	80443387	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	NARF	NM_012336	exon10	c.A986G	p.Q329R	ACTTCCAAGAGGT	.	62	4	36	0	.	51
EPN1	29924	bcgsc.ca	37	19	56200706	56200706	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	EPN1	NM_001130072	exon5	c.C647T	p.A216V	AGCTGGCCCTTAG	.	57	5	43	0	.	98
.	0	bcgsc.ca	37	20	6195679	6195679	+	RNA	SNP	G	A	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	.	.	.	GATGGAGGGCGAG	.	68	21	53	0	.	.
FRG1B	284802	bcgsc.ca	37	20	29628278	29628278	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	FRG1B,NS,carcinoma,0,2	FRG1B	.	.	.	.	AATGAAGCAGGGG	.	585	26	426	8	.	181
FRG1B	284802	bcgsc.ca	37	20	29628299	29628299	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	FRG1B,bladder,carcinoma,-1,16	FRG1B	.	.	.	.	GCAAAAAGTAAAA	.	414	16	278	3	.	181
DNAH11	8701	hgsc.bcm.edu;bcgsc.ca	37	7	21678582	21678582	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZH-A8Y6-01A-11D-A417-09	TCGA-ZH-A8Y6-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ce462b65-84ae-4dfb-91ec-54f5e6e3b86d	1ccf932f-0579-49a6-88c9-8221b3199710	.	.	.	p.A1620S	.	.	GCTCTCGCTGAAT	.	50	4	54	0	.	.