Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ACYP1 0 genome.wustl.edu 37 14 75520314 75520314 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 14 75520314 75520314 G A SNP ACYP1 ENST00000238618 human ensembl 69_37n -1 known missense c.133 p.R45W 0.994 pfam_Acylphosphatase-like,superfamily_Acylphosphatase-like,prints_Acylphosphatase,pfscan_Acylphosphatase-like pfam_Acylphosphatase-like,superfamily_Acylphosphatase-like,prints_Acylphosphatase,pfscan_Acylphosphatase-like - no_errors ACYP1 HGNC ENSG00000119640 291 1 0.34 267 36 11.88 - - - AIDA 0 genome.wustl.edu 37 1 222876531 222876531 + Nonsense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 1 222876531 222876531 G A SNP AIDA ENST00000340020 human ensembl 69_37n -1 known nonsense c.139 p.Q47* 1.000 pfam_AIDA,superfamily_AIDA_N pfam_AIDA,superfamily_AIDA_N - no_errors AIDA HGNC ENSG00000186063 553 0 0.00 721 219 23.20 - - - AKR1B1 0 genome.wustl.edu 37 7 134135680 134135680 + Missense_Mutation SNP A A T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 7 134135680 134135680 A T SNP AKR1B1 ENST00000426422 human ensembl 69_37n -1 known missense c.264 p.D88E 0.000 NULL pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom - no_errors AKR1B1 HGNC ENSG00000085662 68 0 0.00 14 26 65.00 - - - ANKH 0 genome.wustl.edu 37 5 14758638 14758638 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 5 14758638 14758638 G A SNP ANKH ENST00000284268 human ensembl 69_37n -1 known missense c.383 p.T128M 1.000 pfam_ANKH pfam_ANKH - no_errors ANKH HGNC ENSG00000154122 255 0 0.00 284 38 11.76 - - - APOBEC3G 0 genome.wustl.edu 37 22 39475005 39475005 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 22 39475005 39475005 G A SNP APOBEC3G ENST00000407997 human ensembl 69_37n +1 known missense c.86 p.R29H 0.000 pfam_APOBEC_N pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like - no_errors APOBEC3G HGNC ENSG00000239713 238 0 0.00 17 84 83.17 - - - ARHGAP36 0 genome.wustl.edu 37 X 130218365 130218365 + Silent SNP A A G TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 X 130218365 130218365 A G SNP ARHGAP36 ENST00000276211 human ensembl 69_37n +1 known silent c.732 p.Q244 0.004 pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom - no_errors ARHGAP36 HGNC ENSG00000147256 134 0 0.00 68 15 17.86 - - - ASH1L 0 genome.wustl.edu 37 1 155450526 155450527 + Frame_Shift_Ins INS - - T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 1 155450526 155450527 - T INS ASH1L ENST00000368346 human ensembl 69_37n -1 known frame_shift_ins c.2135_2134 p.R712fs 1.000:1.000 NULL pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain - no_errors ASH1L HGNC ENSG00000116539 111 0 0.00 186 22 10.58 - - - ATG2B 0 genome.wustl.edu 37 14 96792113 96792113 + Missense_Mutation SNP C C G TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 14 96792113 96792113 C G SNP ATG2B ENST00000359933 human ensembl 69_37n -1 known missense c.2310 p.W770C 1.000 NULL pfam_Autophagy-rel_C - no_errors ATG2B HGNC ENSG00000066739 259 0 0.00 147 122 45.35 - - - C14orf80 0 genome.wustl.edu 37 14 105958575 105958575 + Missense_Mutation SNP C C G TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 14 105958575 105958575 C G SNP C14orf80 ENST00000392523 human ensembl 69_37n +1 known missense c.358 p.R120G 0.002 NULL NULL - no_errors C14orf80 HGNC ENSG00000185347 69 0 0.00 26 18 40.91 - - - CCDC19 0 genome.wustl.edu 37 1 159846491 159846491 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 1 159846491 159846491 G A SNP CCDC19 ENST00000368099 human ensembl 69_37n -1 known missense c.1207 p.R403C 1.000 NULL NULL - no_errors CCDC19 HGNC ENSG00000213085 222 0 0.00 296 59 16.57 - - - CDH26 0 genome.wustl.edu 37 20 58563973 58563973 + Missense_Mutation SNP G G C TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 20 58563973 58563973 G C SNP CDH26 ENST00000244047 human ensembl 69_37n +1 known missense c.1038 p.E346D 0.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors CDH26 HGNC ENSG00000124215 95 0 0.00 96 35 26.52 - - - CNOT3 0 genome.wustl.edu 37 19 54647208 54647208 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 19 54647208 54647208 G A SNP CNOT3 ENST00000221232 human ensembl 69_37n +1 known missense c.124 p.E42K 1.000 pfam_Not_N,pirsf_CCR4-NOT_su3/5 pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5 - no_errors CNOT3 HGNC ENSG00000088038 125 0 0.00 100 21 17.36 - - - EEF1A1 0 genome.wustl.edu 37 6 74227940 74227940 + Silent SNP A A C TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 6 74227940 74227940 A C SNP EEF1A1 ENST00000309268 human ensembl 69_37n -1 known silent c.1077 p.P359 1.000 pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C,tigrfam_Transl_elong_EF1A_euk/arc pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd,tigrfam_Transl_elong_EF1A_euk/arc - no_errors EEF1A1 HGNC ENSG00000156508 103 1 0.96 51 6 10.53 - - - EHMT1 0 genome.wustl.edu 37 9 140672361 140672361 + Silent SNP C C T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 9 140672361 140672361 C T SNP EHMT1 ENST00000460843 human ensembl 69_37n +1 known silent c.2046 p.D682 0.201 NULL pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt - no_errors EHMT1 HGNC ENSG00000181090 62 0 0.00 39 7 15.22 - - - EIF3A 0 genome.wustl.edu 37 10 120795555 120795555 + Missense_Mutation SNP C C T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 10 120795555 120795555 C T SNP EIF3A ENST00000369144 human ensembl 69_37n -1 known missense c.4145 p.R1382H 1.000 NULL pfam_PCI_dom,smart_PCI_dom - no_errors EIF3A HGNC ENSG00000107581 234 0 0.00 220 39 15.06 - - - FAM127B 0 genome.wustl.edu 37 X 134185956 134185956 + Silent SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 X 134185956 134185956 G A SNP FAM127B ENST00000370775 human ensembl 69_37n -1 known silent c.183 p.D61 0.304 NULL NULL - no_errors FAM127B HGNC ENSG00000203950 126 0 0.00 53 15 22.06 - - - FAM169A 0 genome.wustl.edu 37 5 74078857 74078857 + Nonsense_Mutation SNP C C A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 5 74078857 74078857 C A SNP FAM169A ENST00000389156 human ensembl 69_37n -1 known nonsense c.1363 p.E455* 1.000 NULL NULL - no_errors FAM169A HGNC ENSG00000198780 146 0 0.00 186 30 13.89 - - - FAM98A 0 genome.wustl.edu 37 2 33809886 33809886 + Missense_Mutation SNP T T G TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 2 33809886 33809886 T G SNP FAM98A ENST00000238823 human ensembl 69_37n -1 known missense c.1514 p.Y505S 1.000 NULL pfam_Uncharacterised_FAM98 - no_errors FAM98A HGNC ENSG00000119812 292 0 0.00 155 120 43.48 - - - FER 0 genome.wustl.edu 37 5 108290582 108290582 + Silent SNP T T C TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 5 108290582 108290582 T C SNP FER ENST00000281092 human ensembl 69_37n +1 known silent c.1482 p.L494 1.000 pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2 pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_FCH,superfamily_Kinase-like_dom,smart_FCH,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FCH,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2 - no_errors FER HGNC ENSG00000151422 195 0 0.00 222 31 12.20 - - - GRIK1 0 genome.wustl.edu 37 21 30934056 30934056 + Missense_Mutation SNP C C T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 21 30934056 30934056 C T SNP GRIK1 ENST00000535441 human ensembl 69_37n -1 known missense c.2251 p.A751T 1.000 pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt - no_errors GRIK1 HGNC ENSG00000171189 289 1 0.34 138 81 36.99 - - - JMJD1C 0 genome.wustl.edu 37 10 64974081 64974081 + Nonsense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 10 64974081 64974081 G A SNP JMJD1C ENST00000399262 human ensembl 69_37n -1 known nonsense c.1846 p.R616* 1.000 NULL pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom - no_errors JMJD1C HGNC ENSG00000171988 211 0 0.00 113 105 47.95 - - - MEOX2 0 genome.wustl.edu 37 7 15652133 15652133 + Missense_Mutation SNP C C T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 7 15652133 15652133 C T SNP MEOX2 ENST00000262041 human ensembl 69_37n -1 known missense c.794 p.G265E 1.000 NULL pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa - no_errors MEOX2 HGNC ENSG00000106511 256 0 0.00 121 143 53.76 - - - MUC16 0 genome.wustl.edu 37 19 9062672 9062672 + Silent SNP G G T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 19 9062672 9062672 G T SNP MUC16 ENST00000397910 human ensembl 69_37n -1 known silent c.24774 p.S8258 0.000 NULL pfam_SEA,smart_SEA,pfscan_SEA - no_errors MUC16 HGNC ENSG00000181143 172 0 0.00 50 20 28.57 - - - MYADML 0 genome.wustl.edu 37 2 33952282 33952282 + RNA SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 2 33952282 33952282 G A SNP MYADML ENST00000474610 human ensembl 69_37n -1 known rna NULL NULL 0.810 - - - no_errors MYADML HGNC ENSG00000239649 37 0 0.00 17 4 19.05 - - - MYBBP1A 0 genome.wustl.edu 37 17 4442756 4442756 + Missense_Mutation SNP C C T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 17 4442756 4442756 C T SNP MYBBP1A ENST00000381556 human ensembl 69_37n -1 known missense c.3941 p.S1314N 0.000 NULL pfam_DNA_pol_V,superfamily_ARM-type_fold - no_errors MYBBP1A HGNC ENSG00000132382 105 1 0.94 53 6 10.17 - - - MYRIP 0 genome.wustl.edu 37 3 40192554 40192554 + Missense_Mutation SNP A A T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 3 40192554 40192554 A T SNP MYRIP ENST00000302541 human ensembl 69_37n +1 known missense c.348 p.Q116H 1.000 superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain pfam_Myelin-assoc_OBP,superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain - no_errors MYRIP HGNC ENSG00000170011 90 0 0.00 53 9 14.29 - - - NEK6 0 genome.wustl.edu 37 9 127089686 127089686 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 9 127089686 127089686 G A SNP NEK6 ENST00000373600 human ensembl 69_37n +1 known missense c.686 p.R229H 1.000 pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors NEK6 HGNC ENSG00000119408 193 0 0.00 92 39 29.55 - - - NEK9 0 genome.wustl.edu 37 14 75551376 75551376 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 14 75551376 75551376 G A SNP NEK9 ENST00000238616 human ensembl 69_37n -1 known missense c.2831 p.S944F 1.000 NULL pfam_Prot_kinase_cat_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors NEK9 HGNC ENSG00000119638 276 1 0.36 222 56 20.07 - - - OR2T3 0 genome.wustl.edu 37 1 248637260 248637260 + Silent SNP C C A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 1 248637260 248637260 C A SNP OR2T3 ENST00000359594 human ensembl 69_37n +1 known silent c.609 p.L203 0.000 pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam - no_errors OR2T3 HGNC ENSG00000196539 359 0 0.00 411 70 14.49 - - - OXGR1 0 genome.wustl.edu 37 13 97639726 97639726 + Silent SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 13 97639726 97639726 G A SNP OXGR1 ENST00000298440 human ensembl 69_37n -1 known silent c.288 p.G96 0.000 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor - no_errors OXGR1 HGNC ENSG00000165621 178 1 0.56 46 54 53.47 - - - PER1 0 genome.wustl.edu 37 17 8047052 8047054 + In_Frame_Del DEL CCA CCA - TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 CCA CCA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 17 8047052 8047054 CCA - DEL PER1 ENST00000317276 human ensembl 69_37n -1 known in_frame_del c.2604_2602 p.W868in_frame_del 1.000:1.000:0.998 NULL pfam_Period_circadian-like_C,pfam_PAS_fold_3,smart_PAS,pfscan_PAS - no_errors PER1 HGNC ENSG00000179094 31 0 0.00 3 2 33.33 - - - PIWIL2 0 genome.wustl.edu 37 8 22136963 22136963 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 8 22136963 22136963 G A SNP PIWIL2 ENST00000356766 human ensembl 69_37n +1 known missense c.64 p.V22I 0.048 NULL pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi - no_errors PIWIL2 HGNC ENSG00000197181 139 0 0.00 49 20 28.57 - - - PLIN1 0 genome.wustl.edu 37 15 90212738 90212738 + Missense_Mutation SNP A A T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 15 90212738 90212738 A T SNP PLIN1 ENST00000300055 human ensembl 69_37n -1 known missense c.764 p.V255E 0.933 pfam_Perilipin,pirsf_Perilipin pfam_Perilipin,pirsf_Perilipin - no_errors PLIN1 HGNC ENSG00000166819 44 0 0.00 30 4 11.76 - - - PLXDC2 0 genome.wustl.edu 37 10 20357104 20357104 + Silent SNP G G T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 10 20357104 20357104 G T SNP PLXDC2 ENST00000377252 human ensembl 69_37n +1 known silent c.477 p.V159 1.000 NULL pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like - no_errors PLXDC2 HGNC ENSG00000120594 270 0 0.00 173 113 39.51 - - - RCOR2 0 genome.wustl.edu 37 11 63683048 63683048 + Missense_Mutation SNP C C A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 11 63683048 63683048 C A SNP RCOR2 ENST00000301459 human ensembl 69_37n -1 known missense c.163 p.V55L 0.931 pfam_ELM2_dom,pfscan_ELM2_dom pfam_SANT/Myb,pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom - no_errors RCOR2 HGNC ENSG00000167771 30 0 0.00 18 7 28.00 - - - ROR2 0 genome.wustl.edu 37 9 94487328 94487328 + Missense_Mutation SNP C C T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 9 94487328 94487328 C T SNP ROR2 ENST00000375708 human ensembl 69_37n -1 known missense c.1448 p.R483Q 0.981 pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like - no_errors ROR2 HGNC ENSG00000169071 127 0 0.00 50 31 37.35 - - - SDR39U1 0 genome.wustl.edu 37 14 24910979 24910980 + Frame_Shift_Ins INS - - T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 14 24910979 24910980 - T INS SDR39U1 ENST00000399395 human ensembl 69_37n -1 known frame_shift_ins c.229_228 p.E76fs 1.000:0.994 pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put pfam_DUF1731_C,pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put - no_errors SDR39U1 HGNC ENSG00000100445 200 0 0.00 164 39 19.21 - - - SNORD42B 0 genome.wustl.edu 37 17 27047625 27047625 + RNA SNP A A G TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 17 27047625 27047625 A G SNP SNORD42B ENST00000458893 human ensembl 69_37n +1 known rna NULL NULL 0.944 - - - no_errors SNORD42B HGNC ENSG00000238423 374 0 0.00 307 127 29.20 - - - TMEM132D 0 genome.wustl.edu 37 12 129559467 129559467 + Missense_Mutation SNP G G T TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 12 129559467 129559467 G T SNP TMEM132D ENST00000422113 human ensembl 69_37n -1 known missense c.2253 p.F751L 0.882 NULL NULL - no_errors TMEM132D HGNC ENSG00000151952 198 0 0.00 123 28 18.42 - - - TRPC7 0 genome.wustl.edu 37 5 135587470 135587470 + Missense_Mutation SNP G G A TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 5 135587470 135587470 G A SNP TRPC7 ENST00000502753 human ensembl 69_37n -1 novel missense c.1279 p.R427C 0.992 pfam_Ion_trans_dom,pfam_PKD1_2_channel,tigrfam_TRP_channel pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region TRPC7 HGNC ENSG00000069018 68 0 0.00 36 40 52.63 - - - ZNF391 0 genome.wustl.edu 37 6 27368399 27368399 + Missense_Mutation SNP C C G TCGA-BH-A18L-01A-32D-A12B-09 TCGA-BH-A18L-11A-42D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 883cd3c9-2681-4822-8b22-29149a027514 dc231f7a-c0b8-4639-9885-06ec9a0405a0 6 27368399 27368399 C G SNP ZNF391 ENST00000244576 human ensembl 69_37n +1 known missense c.250 p.P84A 0.000 NULL pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF391 HGNC ENSG00000124613 125 0 0.00 141 24 14.55 - - -