Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All CCDC14 0 genome.wustl.edu 37 3 123667564 123667564 + Missense_Mutation SNP G G A TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 3 123667564 123667564 G A SNP CCDC14 ENST00000488653 human ensembl 69_37n -1 known missense c.802 p.P268S 0.040 NULL NULL - no_errors CCDC14 HGNC ENSG00000175455 348 0 0.00 183 89 32.36 - - - CCDC159 0 genome.wustl.edu 37 19 11462767 11462768 + Frame_Shift_Ins INS - - A TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 19 11462767 11462768 - A INS CCDC159 ENST00000458408 human ensembl 69_37n +1 known frame_shift_ins c.525_526 p.N175fs 0.242:0.583 NULL NULL - no_errors CCDC159 HGNC ENSG00000183401 253 0 0.00 203 109 34.94 - - - ERO1L 0 genome.wustl.edu 37 14 53145184 53145184 + Missense_Mutation SNP C C T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 14 53145184 53145184 C T SNP ERO1L ENST00000395686 human ensembl 69_37n -1 known missense c.325 p.V109I 1.000 pfam_ER_oxidoreductin-1,superfamily_ER_oxidoreductin-1,pirsf_ER_oxidoreductin-1 pfam_ER_oxidoreductin-1,superfamily_ER_oxidoreductin-1,pirsf_ER_oxidoreductin-1 - no_errors ERO1L HGNC ENSG00000197930 154 0 0.00 120 75 38.46 - - - FRG1 0 genome.wustl.edu 37 4 190876224 190876224 + Missense_Mutation SNP T T G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 4 190876224 190876224 T G SNP FRG1 ENST00000226798 human ensembl 69_37n +1 known missense c.350 p.L117R 1.000 pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking - no_errors FRG1 HGNC ENSG00000109536 291 0 0.00 361 61 14.45 - - - GATA3 0 genome.wustl.edu 37 10 8111512 8111513 + Frame_Shift_Ins INS - - T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 10 8111512 8111513 - T INS GATA3 ENST00000379328 human ensembl 69_37n +1 known frame_shift_ins c.1001_1002 p.G335fs 1.000:0.859 pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA - no_errors GATA3 HGNC ENSG00000107485 215 0 0.00 279 67 19.36 - - - GTPBP2 0 genome.wustl.edu 37 6 43593250 43593250 + Missense_Mutation SNP C C G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 6 43593250 43593250 C G SNP GTPBP2 ENST00000307126 human ensembl 69_37n -1 known missense c.555 p.K185N 1.000 pfam_ProtSyn_GTP-bd pfam_ProtSyn_GTP-bd,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel - no_errors GTPBP2 HGNC ENSG00000172432 96 0 0.00 35 73 66.97 - - - HADHA 0 genome.wustl.edu 37 2 26432729 26432729 + Silent SNP T T C TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 2 26432729 26432729 T C SNP HADHA ENST00000380649 human ensembl 69_37n -1 known silent c.1005 p.E335 1.000 tigrfam_Fa_ox_alpha_mit pfam_Crotonase_core,pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_Fa_ox_alpha_mit - no_errors HADHA HGNC ENSG00000084754 284 0 0.00 266 111 29.44 - - - HERC6 0 genome.wustl.edu 37 4 89304502 89304502 + Missense_Mutation SNP G G A TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 4 89304502 89304502 G A SNP HERC6 ENST00000264346 human ensembl 69_37n +1 known missense c.329 p.G110E 0.824 pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_Reg_csome_cond/b-lactamase_inh,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens - no_errors HERC6 HGNC ENSG00000138642 327 0 0.00 161 123 43.16 - - - KCND1 0 genome.wustl.edu 37 X 48826456 48826458 + In_Frame_Del DEL AGA AGA - TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 AGA AGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 X 48826456 48826458 AGA - DEL KCND1 ENST00000218176 human ensembl 69_37n -1 known in_frame_del c.223_221 p.F74in_frame_del 1.000:1.000:1.000 pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv9 pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3 - no_errors KCND1 HGNC ENSG00000102057 37 0 0.00 71 31 30.10 - - - KCNJ15 0 genome.wustl.edu 37 21 39671581 39671581 + Missense_Mutation SNP G G A TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 21 39671581 39671581 G A SNP KCNJ15 ENST00000328656 human ensembl 69_37n +1 known missense c.398 p.R133H 1.000 pfam_K_chnl_inward-rec_Kir_Cr2,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2 pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3,prints_K_chnl_inward-rec_Kir_Cr2,prints_K_chnl_inward-rec_Kir1.1 - no_errors KCNJ15 HGNC ENSG00000157551 117 1 0.84 177 47 20.89 - - - KCNJ16 0 genome.wustl.edu 37 17 68128759 68128759 + Silent SNP G G A TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 17 68128759 68128759 G A SNP KCNJ16 ENST00000283936 human ensembl 69_37n +1 known silent c.531 p.K177 1.000 pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir5,prints_K_chnl_inward-rec_Kir_Cr2 - no_errors KCNJ16 HGNC ENSG00000153822 120 0 0.00 160 65 28.76 - - - KLRC1 0 genome.wustl.edu 37 12 10600155 10600155 + Missense_Mutation SNP A A G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 12 10600155 10600155 A G SNP KLRC1 ENST00000359151 human ensembl 69_37n -1 known missense c.566 p.M189T 0.001 pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin - no_errors KLRC1 HGNC ENSG00000134545 390 0 0.00 267 172 39.09 - - - MLL3 0 genome.wustl.edu 37 7 151882645 151882646 + Frame_Shift_Ins INS - - A TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 7 151882645 151882646 - A INS MLL3 ENST00000355193 human ensembl 69_37n -1 known frame_shift_ins c.5080_5079 p.V1693fs 1.000:1.000 superfamily_HMG_superfamily,smart_HMG_superfamily pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING - no_errors MLL3 HGNC ENSG00000055609 313 0 0.00 283 139 32.94 - - - NALCN 0 genome.wustl.edu 37 13 101759935 101759935 + Missense_Mutation SNP C C G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 13 101759935 101759935 C G SNP NALCN ENST00000251127 human ensembl 69_37n -1 known missense c.2482 p.E828Q 1.000 NULL pfam_Ion_trans_dom - no_errors NALCN HGNC ENSG00000102452 507 1 0.20 156 332 67.89 - - - NSUN5P1 0 genome.wustl.edu 37 7 75044928 75044928 + RNA SNP G G T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 7 75044928 75044928 G T SNP NSUN5P1 ENST00000393633 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors NSUN5P1 HGNC ENSG00000223705 33 0 0.00 51 39 43.33 - - - OR5J2 0 genome.wustl.edu 37 11 55944758 55944758 + Missense_Mutation SNP C C T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 11 55944758 55944758 C T SNP OR5J2 ENST00000312298 human ensembl 69_37n +1 known missense c.665 p.A222V 0.000 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt - no_errors OR5J2 HGNC ENSG00000174957 174 0 0.00 216 157 41.98 - - - PHACTR1 0 genome.wustl.edu 37 6 13206102 13206102 + Missense_Mutation SNP A A T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 6 13206102 13206102 A T SNP PHACTR1 ENST00000415087 human ensembl 69_37n +1 known missense c.224 p.Y75F 1.000 NULL pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat - pseudogene:no_stop_codon:bad_bp_length_for_coding_region PHACTR1 HGNC ENSG00000112137 68 0 0.00 45 84 65.12 - - - PHLDB2 0 genome.wustl.edu 37 3 111632538 111632538 + Missense_Mutation SNP A A G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 3 111632538 111632538 A G SNP PHLDB2 ENST00000393925 human ensembl 69_37n +1 known missense c.1708 p.I570V 0.999 NULL pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology - no_errors PHLDB2 HGNC ENSG00000144824 287 0 0.00 163 111 40.51 - - - PIWIL4 0 genome.wustl.edu 37 11 94308183 94308183 + Missense_Mutation SNP C C G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 11 94308183 94308183 C G SNP PIWIL4 ENST00000299001 human ensembl 69_37n +1 known missense c.185 p.S62C 0.973 NULL pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi - no_errors PIWIL4 HGNC ENSG00000134627 306 0 0.00 264 74 21.89 - - - PTPRB 0 genome.wustl.edu 37 12 70925884 70925884 + Silent SNP T T C TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 12 70925884 70925884 T C SNP PTPRB ENST00000334414 human ensembl 69_37n -1 known silent c.6435 p.K2145 0.972 pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt - no_errors PTPRB HGNC ENSG00000127329 348 0 0.00 349 191 35.37 - - - SERPIND1 0 genome.wustl.edu 37 22 21138494 21138494 + Missense_Mutation SNP C C G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 22 21138494 21138494 C G SNP SERPIND1 ENST00000215727 human ensembl 69_37n +1 known missense c.1124 p.P375R 1.000 pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom,prints_Prot_inh_Lserp2 - no_errors SERPIND1 HGNC ENSG00000099937 70 0 0.00 87 61 41.22 - - - SMAD9 0 genome.wustl.edu 37 13 37453778 37453778 + Missense_Mutation SNP C C T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 13 37453778 37453778 C T SNP SMAD9 ENST00000379826 human ensembl 69_37n -1 known missense c.49 p.A17T 1.000 superfamily_MAD_homology_MH1,pfscan_MAD_homology_MH1 pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type - no_errors SMAD9 HGNC ENSG00000120693 85 0 0.00 28 72 72.00 - - - STK38L 0 genome.wustl.edu 37 12 27470270 27470270 + Missense_Mutation SNP C C T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 12 27470270 27470270 C T SNP STK38L ENST00000389032 human ensembl 69_37n +1 known missense c.839 p.A280V 1.000 pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_cat_dom - no_errors STK38L HGNC ENSG00000211455 342 0 0.00 254 197 43.20 - - - TPCN1 0 genome.wustl.edu 37 12 113728784 113728784 + Missense_Mutation SNP A A T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 12 113728784 113728784 A T SNP TPCN1 ENST00000541517 human ensembl 69_37n +1 known missense c.2156 p.N719I 1.000 pfam_Ion_trans_dom pfam_Ion_trans_dom - no_errors TPCN1 HGNC ENSG00000186815 176 0 0.00 208 140 40.11 - - - UBE2A 0 genome.wustl.edu 37 X 118715485 118715485 + Frame_Shift_Del DEL C C - TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 X 118715485 118715485 C - DEL UBE2A ENST00000371558 human ensembl 69_37n +1 known frame_shift_del c.167 p.T56fs 1.000 pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2 pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2 - no_errors UBE2A HGNC ENSG00000077721 212 0 0.00 155 107 38.91 - - - VPS13D 0 genome.wustl.edu 37 1 12331106 12331106 + Silent SNP A A G TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 1 12331106 12331106 A G SNP VPS13D ENST00000358136 human ensembl 69_37n +1 known silent c.2028 p.Q676 0.998 NULL pfam_VPSAP,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk - no_errors VPS13D HGNC ENSG00000048707 170 0 0.00 135 104 43.33 - - - VSIG8 0 genome.wustl.edu 37 1 159827578 159827580 + In_Frame_Del DEL TGA TGA - TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 TGA TGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 1 159827578 159827580 TGA - DEL VSIG8 ENST00000368100 human ensembl 69_37n -1 known in_frame_del c.609_607 p.S203in_frame_del 0.909:0.997:1.000 pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like - no_errors VSIG8 HGNC ENSG00000243284 144 0 0.00 193 38 15.64 - - - WASH3P 0 genome.wustl.edu 37 15 102516652 102516652 + RNA SNP C C T TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 15 102516652 102516652 C T SNP WASH3P ENST00000557932 human ensembl 69_37n +1 known rna NULL NULL 0.002 - - - no_errors WASH3P HGNC ENSG00000185596 12 0 0.00 9 6 40.00 - - - ZNF292 0 genome.wustl.edu 37 6 87964453 87964456 + Frame_Shift_Del DEL TATC TATC - TCGA-B6-A0WV-01A-11D-A10G-09 TCGA-B6-A0WV-10A-01D-A10G-09 TATC TATC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b92107c5-c46f-4606-b4e9-2dab55ca4e9c ea0de699-16b8-468d-ab85-223eb3880566 6 87964453 87964456 TATC - DEL ZNF292 ENST00000369577 human ensembl 69_37n +1 known frame_shift_del c.1106_1109 p.S370fs 1.000:0.995:1.000:1.000 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF292 HGNC ENSG00000188994 276 0 0.00 113 133 52.57 - - -