Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All APBA2 0 genome.wustl.edu 37 15 29347021 29347021 + Missense_Mutation SNP A A G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 15 29347021 29347021 A G SNP APBA2 ENST00000558259 human ensembl 69_37n +1 known missense c.934 p.K312E 1.000 NULL pfam_PTyr_interaction_dom,pfam_PDZ,superfamily_PDZ,smart_PTyr_interaction_dom,smart_PDZ,pfscan_PDZ,pfscan_PTyr_interaction_dom - no_errors APBA2 HGNC ENSG00000034053 77 0 0.00 73 9 10.98 - - - ARHGAP21 0 genome.wustl.edu 37 10 24885700 24885700 + Missense_Mutation SNP A A G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 10 24885700 24885700 A G SNP ARHGAP21 ENST00000396432 human ensembl 69_37n -1 known missense c.3446 p.L1149P 1.000 superfamily_Rho_GTPase_activation_prot,pfscan_RhoGAP_dom pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom - no_errors ARHGAP21 HGNC ENSG00000107863 74 0 0.00 51 13 20.31 - - - BNC2 0 genome.wustl.edu 37 9 16437297 16437297 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 9 16437297 16437297 C T SNP BNC2 ENST00000380672 human ensembl 69_37n -1 known missense c.895 p.A299T 0.970 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors BNC2 HGNC ENSG00000173068 74 0 0.00 58 10 14.71 - - - CCDC23 0 genome.wustl.edu 37 1 43282143 43282144 + Frame_Shift_Del DEL TC TC - TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 TC TC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 43282143 43282144 TC - DEL CCDC23 ENST00000372521 human ensembl 69_37n -1 known frame_shift_del c.73_72 p.K25fs 1.000:1.000 NULL NULL - no_errors CCDC23 HGNC ENSG00000177868 48 0 0.00 38 6 13.64 - - - CHRFAM7A 0 genome.wustl.edu 37 15 30665226 30665226 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 15 30665226 30665226 C T SNP CHRFAM7A ENST00000299847 human ensembl 69_37n -1 known missense c.283 p.A95T 1.000 pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel - no_errors CHRFAM7A HGNC ENSG00000166664 55 0 0.00 41 11 21.15 - - - CNGA2 0 genome.wustl.edu 37 X 150911871 150911871 + Missense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 X 150911871 150911871 C G SNP CNGA2 ENST00000329903 human ensembl 69_37n +1 known missense c.896 p.S299C 1.000 pfam_Ion_trans_dom pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom - no_errors CNGA2 HGNC ENSG00000183862 61 0 0.00 43 12 21.82 - - - COL6A4P1 0 genome.wustl.edu 37 3 15215441 15215441 + RNA SNP G G T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 3 15215441 15215441 G T SNP COL6A4P1 ENST00000491915 human ensembl 69_37n -1 known rna NULL NULL 0.960 - - - no_errors COL6A4P1 HGNC ENSG00000230524 53 0 0.00 32 8 20.00 - - - CPT1A 0 genome.wustl.edu 37 11 68552320 68552320 + Missense_Mutation SNP C C A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 11 68552320 68552320 C A SNP CPT1A ENST00000265641 human ensembl 69_37n -1 known missense c.1126 p.G376W 1.000 pfam_Carn_acyl_trans pfam_Carn_acyl_trans - no_errors CPT1A HGNC ENSG00000110090 39 0 0.00 42 7 14.29 - - - DDX11L9 0 genome.wustl.edu 37 15 102516835 102516835 + RNA SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 15 102516835 102516835 C T SNP DDX11L9 ENST00000559159 human ensembl 69_37n -1 known rna NULL NULL 0.030 - - - no_errors DDX11L9 HGNC ENSG00000248472 19 0 0.00 5 3 37.50 - - - EFCAB5 0 genome.wustl.edu 37 17 28405362 28405363 + Frame_Shift_Del DEL GT GT - TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 GT GT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 17 28405362 28405363 GT - DEL EFCAB5 ENST00000394835 human ensembl 69_37n +1 known frame_shift_del c.2867_2868 p.V957fs 0.238:0.000 NULL pfscan_EF_HAND_2 - no_errors EFCAB5 HGNC ENSG00000176927 51 0 0.00 32 7 17.95 - - - EHMT1 0 genome.wustl.edu 37 9 140728964 140728964 + Missense_Mutation SNP G G C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 9 140728964 140728964 G C SNP EHMT1 ENST00000460843 human ensembl 69_37n +1 known missense c.3704 p.G1235A 1.000 pfam_SET_dom,smart_SET_dom,pfscan_SET_dom pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt - no_errors EHMT1 HGNC ENSG00000181090 71 0 0.00 59 10 14.49 - - - EML5 0 genome.wustl.edu 37 14 89163200 89163200 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 14 89163200 89163200 C T SNP EML5 ENST00000554922 human ensembl 69_37n -1 known missense c.2335 p.D779N 1.000 pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors EML5 HGNC ENSG00000165521 55 0 0.00 36 8 18.18 - - - FAM72B 0 genome.wustl.edu 37 1 120854498 120854498 + Missense_Mutation SNP A A G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 120854498 120854498 A G SNP FAM72B ENST00000369390 human ensembl 69_37n +1 known missense c.362 p.N121S 1.000 NULL NULL - no_errors FAM72B HGNC ENSG00000188610 264 0 0.00 127 21 14.19 - - - FCGBP 0 genome.wustl.edu 37 19 40357467 40357467 + Missense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 19 40357467 40357467 C G SNP FCGBP ENST00000221347 human ensembl 69_37n -1 known missense c.15846 p.Q5282H 0.000 pfam_VWF_type-D,smart_VWF_type-D pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out - no_errors FCGBP HGNC ENSG00000090920 48 0 0.00 36 13 26.53 - - - GABRD 0 genome.wustl.edu 37 1 1956838 1956838 + Missense_Mutation SNP A A G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 1956838 1956838 A G SNP GABRD ENST00000378585 human ensembl 69_37n +1 known missense c.247 p.M83V 1.000 pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel - no_errors GABRD HGNC ENSG00000187730 38 0 0.00 34 6 15.00 - - - GALNT2 0 genome.wustl.edu 37 1 230415130 230415130 + Missense_Mutation SNP G G A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 230415130 230415130 G A SNP GALNT2 ENST00000366672 human ensembl 69_37n +1 known missense c.1642 p.G548R 1.000 pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin - no_errors GALNT2 HGNC ENSG00000143641 55 0 0.00 43 8 15.69 - - - GFPT2 0 genome.wustl.edu 37 5 179731905 179731905 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 5 179731905 179731905 C T SNP GFPT2 ENST00000253778 human ensembl 69_37n -1 known missense c.1709 p.G570D 1.000 pfam_SIS,tigrfam_GlmS_trans pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans - no_errors GFPT2 HGNC ENSG00000131459 27 0 0.00 30 4 11.76 - - - GLUL 0 genome.wustl.edu 37 1 182356328 182356328 + Missense_Mutation SNP A A G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 182356328 182356328 A G SNP GLUL ENST00000311223 human ensembl 69_37n -1 known missense c.266 p.F89S 1.000 pfam_Gln_synt_beta,superfamily_Gln_synt_beta pfam_Gln_synth_cat_dom,pfam_Gln_synt_beta,superfamily_Gln_synt_beta - no_errors GLUL HGNC ENSG00000135821 40 0 0.00 47 6 11.32 - - - GRHL2 0 genome.wustl.edu 37 8 102611287 102611287 + Missense_Mutation SNP G G T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 8 102611287 102611287 G T SNP GRHL2 ENST00000251808 human ensembl 69_37n +1 known missense c.1006 p.D336Y 1.000 pfam_CP2 pfam_CP2 - no_errors GRHL2 HGNC ENSG00000083307 79 0 0.00 62 9 12.68 - - - GUSBP5 0 genome.wustl.edu 37 4 144481165 144481165 + RNA SNP T T G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 4 144481165 144481165 T G SNP GUSBP5 ENST00000509369 human ensembl 69_37n +1 known rna NULL NULL 0.999 - - - no_errors GUSBP5 HGNC ENSG00000236296 36 0 0.00 50 8 13.79 - - - HPS3 0 genome.wustl.edu 37 3 148877950 148877950 + Missense_Mutation SNP A A T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 3 148877950 148877950 A T SNP HPS3 ENST00000296051 human ensembl 69_37n +1 known missense c.1990 p.R664W 0.003 pirsf_BLOC-2_complex_Hps3_subunit pirsf_BLOC-2_complex_Hps3_subunit - no_errors HPS3 HGNC ENSG00000163755 75 0 0.00 51 10 16.39 - - - HRAS 0 genome.wustl.edu 37 11 534286 534286 + Missense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 11 534286 534286 C G SNP HRAS ENST00000311189 human ensembl 69_37n -1 known missense c.37 p.G13R 1.000 pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_Fe2_transport_prot_B_N,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom - no_errors HRAS HGNC ENSG00000174775 59 0 0.00 45 30 40.00 - - - HSPB11 0 genome.wustl.edu 37 1 54387380 54387380 + Missense_Mutation SNP C C A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 54387380 54387380 C A SNP HSPB11 ENST00000194214 human ensembl 69_37n -1 known missense c.379 p.A127S 1.000 pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like - no_errors HSPB11 HGNC ENSG00000081870 33 0 0.00 41 8 16.33 - - - INADL 0 genome.wustl.edu 37 1 62374109 62374109 + Silent SNP A A G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 62374109 62374109 A G SNP INADL ENST00000371158 human ensembl 69_37n +1 known silent c.3447 p.G1149 0.953 pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ - no_errors INADL HGNC ENSG00000132849 79 0 0.00 69 16 18.82 - - - IQCE 0 genome.wustl.edu 37 7 2617916 2617916 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 7 2617916 2617916 C T SNP IQCE ENST00000402050 human ensembl 69_37n +1 known missense c.506 p.T169M 0.955 NULL pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS - no_errors IQCE HGNC ENSG00000106012 42 0 0.00 51 7 12.07 - - - KDM3A 0 genome.wustl.edu 37 2 86709793 86709793 + Silent SNP T T C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 2 86709793 86709793 T C SNP KDM3A ENST00000312912 human ensembl 69_37n +1 known silent c.2898 p.F966 1.000 NULL pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom - no_errors KDM3A HGNC ENSG00000115548 42 0 0.00 38 7 15.56 - - - KIAA1210 0 genome.wustl.edu 37 X 118221920 118221920 + Silent SNP G G T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 X 118221920 118221920 G T SNP KIAA1210 ENST00000402510 human ensembl 69_37n -1 known silent c.3273 p.T1091 0.000 NULL NULL - no_errors KIAA1210 HGNC ENSG00000250423 57 0 0.00 21 6 22.22 - - - LAMA1 0 genome.wustl.edu 37 18 6943262 6943262 + Missense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 18 6943262 6943262 C G SNP LAMA1 ENST00000389658 human ensembl 69_37n -1 known missense c.8984 p.G2995A 0.999 pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N - no_errors LAMA1 HGNC ENSG00000101680 137 0 0.00 91 22 19.47 - - - MAP4 0 genome.wustl.edu 37 3 47898938 47898938 + Missense_Mutation SNP T T C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 3 47898938 47898938 T C SNP MAP4 ENST00000360240 human ensembl 69_37n -1 known missense c.3131 p.N1044S 1.000 pfam_Tau/MAP_tubulin-bd_rpt pfam_Tau/MAP_tubulin-bd_rpt - no_errors MAP4 HGNC ENSG00000047849 31 0 0.00 43 5 10.42 - - - MAVS 0 genome.wustl.edu 37 20 3845133 3845133 + Missense_Mutation SNP G G T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 20 3845133 3845133 G T SNP MAVS ENST00000428216 human ensembl 69_37n +1 known missense c.856 p.G286W 0.000 NULL NULL - no_errors MAVS HGNC ENSG00000088888 42 0 0.00 47 7 12.96 - - - MDN1 0 genome.wustl.edu 37 6 90383931 90383931 + Missense_Mutation SNP C C A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 6 90383931 90383931 C A SNP MDN1 ENST00000369393 human ensembl 69_37n -1 known missense c.13139 p.W4380L 1.000 pirsf_Midasin pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A - no_errors MDN1 HGNC ENSG00000112159 34 0 0.00 28 5 15.15 - - - MIR1257 0 genome.wustl.edu 37 20 60528653 60528653 + RNA SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 20 60528653 60528653 C T SNP MIR1257 ENST00000408490 human ensembl 69_37n -1 known rna NULL NULL 0.022 - - - no_errors MIR1257 HGNC ENSG00000221417 29 0 0.00 24 4 14.29 - - - MTA2 0 genome.wustl.edu 37 11 62365548 62365548 + Silent SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 11 62365548 62365548 C T SNP MTA2 ENST00000278823 human ensembl 69_37n -1 known silent c.438 p.E146 1.000 pfscan_ELM2_dom pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom - no_errors MTA2 HGNC ENSG00000149480 78 0 0.00 65 8 10.96 - - - NALCN 0 genome.wustl.edu 37 13 101755600 101755600 + Silent SNP G G A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 13 101755600 101755600 G A SNP NALCN ENST00000251127 human ensembl 69_37n -1 known silent c.2980 p.L994 1.000 pfam_Ion_trans_dom pfam_Ion_trans_dom - no_errors NALCN HGNC ENSG00000102452 49 0 0.00 18 4 18.18 - - - ODZ1 0 genome.wustl.edu 37 X 123539064 123539064 + Silent SNP A A C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 X 123539064 123539064 A C SNP ODZ1 ENST00000422452 human ensembl 69_37n -1 known silent c.5208 p.T1736 0.302 NULL pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD - no_errors ODZ1 HGNC ENSG00000009694 35 0 0.00 34 7 17.07 - - - OR8K3 0 genome.wustl.edu 37 11 56086127 56086127 + Silent SNP C C A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 11 56086127 56086127 C A SNP OR8K3 ENST00000312711 human ensembl 69_37n +1 known silent c.345 p.L115 0.041 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR8K3 HGNC ENSG00000181689 59 0 0.00 36 6 14.29 - - - PCDHB11 0 genome.wustl.edu 37 5 140580562 140580563 + Frame_Shift_Del DEL AG AG - TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 AG AG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 5 140580562 140580563 AG - DEL PCDHB11 ENST00000354757 human ensembl 69_37n +1 known frame_shift_del c.1215_1216 p.R407fs 0.000:0.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors PCDHB11 HGNC ENSG00000197479 89 0 0.00 63 7 10.00 - - - PCDHB7 0 genome.wustl.edu 37 5 140553974 140553974 + Missense_Mutation SNP G G C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 5 140553974 140553974 G C SNP PCDHB7 ENST00000231137 human ensembl 69_37n +1 known missense c.1558 p.D520H 1.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors PCDHB7 HGNC ENSG00000113212 185 0 0.00 145 21 12.65 - - - PCSK5 0 genome.wustl.edu 37 9 78722166 78722166 + Splice_Site SNP G G C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 9 78722166 78722166 G C SNP PCSK5 ENST00000545128 human ensembl 69_37n +1 known splice_site c.1108-1 e9-1 1.000 - - - no_errors PCSK5 HGNC ENSG00000099139 24 0 0.00 16 6 27.27 - - - POGLUT1 0 genome.wustl.edu 37 3 119198942 119198942 + Missense_Mutation SNP G G C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 3 119198942 119198942 G C SNP POGLUT1 ENST00000295588 human ensembl 69_37n +1 known missense c.501 p.W167C 1.000 pfam_LipoPS_modifying,smart_LipoPS_modifying pfam_LipoPS_modifying,smart_LipoPS_modifying - no_errors POGLUT1 HGNC ENSG00000163389 89 0 0.00 78 9 10.34 - - - POM121C 0 genome.wustl.edu 37 7 75051419 75051419 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 7 75051419 75051419 C T SNP POM121C ENST00000257665 human ensembl 69_37n -1 known missense c.2842 p.A948T 0.005 NULL NULL - no_errors POM121C HGNC ENSG00000135213 48 0 0.00 24 3 11.11 - - - PPBP 0 genome.wustl.edu 37 4 74853801 74853801 + Missense_Mutation SNP G G A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 4 74853801 74853801 G A SNP PPBP ENST00000296028 human ensembl 69_37n -1 known missense c.20 p.T7I 0.002 NULL pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXCL8/IL8,prints_Chemokine_CXC - no_errors PPBP HGNC ENSG00000163736 47 0 0.00 55 8 12.70 - - - PSMC6 0 genome.wustl.edu 37 14 53184802 53184802 + Nonsense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 14 53184802 53184802 C G SNP PSMC6 ENST00000556813 human ensembl 69_37n +1 novel nonsense c.531 p.Y177* 1.000 pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_AAA+_ATPase pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_AAA+_ATPase - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region PSMC6 HGNC ENSG00000100519 51 0 0.00 30 5 14.29 - - - RALGAPA1 0 genome.wustl.edu 37 14 36159078 36159078 + Missense_Mutation SNP C C A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 14 36159078 36159078 C A SNP RALGAPA1 ENST00000258840 human ensembl 69_37n -1 known missense c.2539 p.D847Y 1.000 NULL pfam_Rap_GAP,superfamily_ARM-type_fold,pfscan_Rap_GAP - no_errors RALGAPA1 HGNC ENSG00000174373 49 0 0.00 38 5 11.63 - - - RNPC3 0 genome.wustl.edu 37 1 104093607 104093607 + Missense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 104093607 104093607 C G SNP RNPC3 ENST00000423855 human ensembl 69_37n +1 known missense c.1406 p.A469G 1.000 pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom - no_errors RNPC3 HGNC ENSG00000185946 43 0 0.00 27 8 22.86 - - - SEMA3B 0 genome.wustl.edu 37 3 50308521 50308521 + RNA SNP G G T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 3 50308521 50308521 G T SNP SEMA3B ENST00000316347 human ensembl 69_37n +1 known rna NULL NULL 0.995 - - - no_errors SEMA3B HGNC ENSG00000012171 39 0 0.00 30 4 11.76 - - - SLC39A7 0 genome.wustl.edu 37 6 33168855 33168855 + RNA SNP T T A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 6 33168855 33168855 T A SNP SLC39A7 ENST00000496894 human ensembl 69_37n +1 putative rna NULL NULL 0.000 - - - no_errors SLC39A7 HGNC ENSG00000112473 49 0 0.00 36 4 10.00 - - - SOHLH1 0 genome.wustl.edu 37 9 138590846 138590846 + Missense_Mutation SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 9 138590846 138590846 C G SNP SOHLH1 ENST00000425225 human ensembl 69_37n -1 known missense c.192 p.E64D 0.879 pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd - no_errors SOHLH1 HGNC ENSG00000165643 53 0 0.00 62 10 13.89 - - - SPEF2 0 genome.wustl.edu 37 5 35694435 35694435 + Missense_Mutation SNP T T G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 5 35694435 35694435 T G SNP SPEF2 ENST00000356031 human ensembl 69_37n +1 known missense c.1945 p.L649V 0.000 NULL pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC,superfamily_CH-domain,pfscan_CH-domain - no_errors SPEF2 HGNC ENSG00000152582 98 0 0.00 52 10 16.13 - - - SPTLC2 0 genome.wustl.edu 37 14 78028748 78028748 + Missense_Mutation SNP T T C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 14 78028748 78028748 T C SNP SPTLC2 ENST00000216484 human ensembl 69_37n -1 known missense c.841 p.K281E 1.000 pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom - no_errors SPTLC2 HGNC ENSG00000100596 56 0 0.00 37 10 21.28 - - - SUGP2 0 genome.wustl.edu 37 19 19136590 19136590 + Silent SNP C C G TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 19 19136590 19136590 C G SNP SUGP2 ENST00000337018 human ensembl 69_37n -1 known silent c.567 p.R189 0.507 NULL pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom - no_errors SUGP2 HGNC ENSG00000064607 43 0 0.00 19 7 26.92 - - - TCEA1 0 genome.wustl.edu 37 8 54879688 54879688 + RNA SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 8 54879688 54879688 C T SNP TCEA1 ENST00000521086 human ensembl 69_37n -1 known rna NULL NULL 0.094 - - - no_errors TCEA1 HGNC ENSG00000187735 24 0 0.00 24 7 22.58 - - - TDRD5 0 genome.wustl.edu 37 1 179603712 179603712 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 179603712 179603712 C T SNP TDRD5 ENST00000444136 human ensembl 69_37n +1 known missense c.1247 p.P416L 0.550 NULL pfam_Tudor,smart_Tudor,pfscan_Tudor - no_errors TDRD5 HGNC ENSG00000162782 52 0 0.00 36 8 18.18 - - - TMCO4 0 genome.wustl.edu 37 1 20082237 20082237 + Silent SNP T T C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 20082237 20082237 T C SNP TMCO4 ENST00000294543 human ensembl 69_37n -1 known silent c.405 p.R135 1.000 NULL pfam_DUF726,pfam_DUF900_hydrolase - no_errors TMCO4 HGNC ENSG00000162542 58 0 0.00 32 7 17.95 - - - TP53 0 genome.wustl.edu 37 17 7578222 7578223 + Frame_Shift_Del DEL TC TC - TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 TC TC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 17 7578222 7578223 TC - DEL TP53 ENST00000269305 human ensembl 69_37n -1 known frame_shift_del c.627_626 p.R209fs 0.000:0.000 pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor - no_errors TP53 HGNC ENSG00000141510 69 0 0.00 30 6 16.67 - - - TSPAN1 0 genome.wustl.edu 37 1 46651256 46651256 + RNA SNP G G T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 1 46651256 46651256 G T SNP TSPAN1 ENST00000470318 human ensembl 69_37n +1 known rna NULL NULL 0.006 - - - no_errors TSPAN1 HGNC ENSG00000117472 65 0 0.00 63 13 17.11 - - - TSPAN12 0 genome.wustl.edu 37 7 120496782 120496782 + Missense_Mutation SNP G G C TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 7 120496782 120496782 G C SNP TSPAN12 ENST00000222747 human ensembl 69_37n -1 known missense c.36 p.C12W 1.000 pfam_Tetraspanin/Peripherin,prints_Tetraspanin pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin - no_errors TSPAN12 HGNC ENSG00000106025 44 0 0.00 53 10 15.87 - - - VRTN 0 genome.wustl.edu 37 14 74824018 74824018 + Missense_Mutation SNP G G A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 14 74824018 74824018 G A SNP VRTN ENST00000256362 human ensembl 69_37n +1 known missense c.532 p.A178T 1.000 NULL pfam_Transposase_8 - no_errors VRTN HGNC ENSG00000133980 56 0 0.00 54 7 11.48 - - - XYLT2 0 genome.wustl.edu 37 17 48433607 48433607 + Silent SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 17 48433607 48433607 C T SNP XYLT2 ENST00000017003 human ensembl 69_37n +1 known silent c.1467 p.D489 1.000 NULL pfam_XylT_met,pfam_Glyco_trans_14 - no_errors XYLT2 HGNC ENSG00000015532 42 0 0.00 28 5 15.15 - - - ZBED5 0 genome.wustl.edu 37 11 10875493 10875493 + Missense_Mutation SNP C C T TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 11 10875493 10875493 C T SNP ZBED5 ENST00000413761 human ensembl 69_37n -1 putative missense c.1000 p.E334K 1.000 superfamily_RNaseH-like_dom superfamily_RNaseH-like_dom,pfscan_Znf_BED_prd - no_errors ZBED5 HGNC ENSG00000236287 51 0 0.00 23 14 37.84 - - - ZFP91 0 genome.wustl.edu 37 11 58347039 58347039 + Silent SNP G G A TCGA-AR-A5QQ-01A-11D-A28B-09 TCGA-AR-A5QQ-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx ead4a158-677a-4f8b-99a2-536f0ec76469 b3ee2a63-4fe7-4c96-b0a3-3e9b1c9bf579 11 58347039 58347039 G A SNP ZFP91 ENST00000316059 human ensembl 69_37n +1 known silent c.285 p.Q95 0.959 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZFP91 HGNC ENSG00000186660 12 0 0.00 10 4 28.57 - - -