Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ABCC3 0 genome.wustl.edu 37 17 48750941 48750941 + Missense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 17 48750941 48750941 C A SNP ABCC3 ENST00000285238 human ensembl 69_37n +1 known missense c.2521 p.R841S 0.882 pfscan_ABC_transporter-like,tigrfam_Multidrug-R_assoc pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc - no_errors ABCC3 HGNC ENSG00000108846 52 0 0.00 31 8 20.51 - - - ADAM23 0 genome.wustl.edu 37 2 207435499 207435499 + Silent SNP G G T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 207435499 207435499 G T SNP ADAM23 ENST00000264377 human ensembl 69_37n +1 known silent c.1530 p.V510 0.999 pfscan_Blood-coag_inhib_Disintegrin pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B - no_errors ADAM23 HGNC ENSG00000114948 127 0 0.00 47 10 17.54 - - - ADAMTSL1 0 genome.wustl.edu 37 9 18888027 18888027 + Missense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 9 18888027 18888027 C A SNP ADAMTSL1 ENST00000388710 human ensembl 69_37n +1 known missense c.551 p.S184Y 0.025 pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like - no_errors ADAMTSL1 HGNC ENSG00000178031 44 0 0.00 20 6 23.08 - - - AMBRA1 0 genome.wustl.edu 37 11 46564000 46564000 + Nonsense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 11 46564000 46564000 C A SNP AMBRA1 ENST00000458649 human ensembl 69_37n -1 known nonsense c.1567 p.E523* 0.617 NULL pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors AMBRA1 HGNC ENSG00000110497 42 0 0.00 35 5 12.50 - - - ATM 0 genome.wustl.edu 37 11 108196269 108196269 + Nonsense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 11 108196269 108196269 C T SNP ATM ENST00000278616 human ensembl 69_37n +1 known nonsense c.6805 p.Q2269* 1.000 pfam_PIK-rel_kinase_FAT,superfamily_ARM-type_fold,pfscan_PIK_FAT pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom - no_errors ATM HGNC ENSG00000149311 44 0 0.00 31 20 39.22 - - - CABS1 0 genome.wustl.edu 37 4 71201597 71201597 + Missense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 4 71201597 71201597 C T SNP CABS1 ENST00000273936 human ensembl 69_37n +1 known missense c.841 p.R281W 0.001 NULL NULL - no_errors CABS1 HGNC ENSG00000145309 46 0 0.00 30 8 21.05 - - - CACNA1E 0 genome.wustl.edu 37 1 181767626 181767626 + Missense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 1 181767626 181767626 C A SNP CACNA1E ENST00000367573 human ensembl 69_37n +1 known missense c.6598 p.L2200M 0.964 NULL pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_R_a1su - no_errors CACNA1E HGNC ENSG00000198216 40 0 0.00 24 7 22.58 - - - CCDC88C 0 genome.wustl.edu 37 14 91779543 91779543 + Missense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 14 91779543 91779543 C T SNP CCDC88C ENST00000389857 human ensembl 69_37n -1 known missense c.2617 p.D873N 1.000 NULL pfam_HOOK,superfamily_Prefoldin,superfamily_Fum_Rdtase/Succ_DH_flav-like_C - no_errors CCDC88C HGNC ENSG00000015133 75 0 0.00 34 7 16.67 - - - CEP192 0 genome.wustl.edu 37 18 13056429 13056429 + Missense_Mutation SNP C C G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 18 13056429 13056429 C G SNP CEP192 ENST00000506447 human ensembl 69_37n +1 known missense c.3840 p.C1280W 0.598 NULL NULL - no_errors CEP192 HGNC ENSG00000101639 77 0 0.00 26 12 31.58 - - - CNNM4 0 genome.wustl.edu 37 2 97427918 97427918 + Missense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 97427918 97427918 C A SNP CNNM4 ENST00000377075 human ensembl 69_37n +1 known missense c.1182 p.F394L 1.000 NULL pfam_DUF21,pfam_Cysta_beta_synth_core,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom - no_errors CNNM4 HGNC ENSG00000158158 68 0 0.00 40 6 13.04 - - - CNTLN 0 genome.wustl.edu 37 9 17416099 17416099 + Missense_Mutation SNP T T G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 9 17416099 17416099 T G SNP CNTLN ENST00000380647 human ensembl 69_37n +1 known missense c.3026 p.V1009G 0.877 NULL superfamily_Prefoldin - no_errors CNTLN HGNC ENSG00000044459 46 0 0.00 31 7 18.42 - - - CPNE4 0 genome.wustl.edu 37 3 131293958 131293958 + Missense_Mutation SNP G G T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 3 131293958 131293958 G T SNP CPNE4 ENST00000502818 human ensembl 69_37n -1 known missense c.938 p.S313Y 1.000 NULL pfam_Copine,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_VWF_A,pfscan_C2_membr_targeting - no_errors CPNE4 HGNC ENSG00000196353 80 0 0.00 89 11 11.00 - - - CSMD3 0 genome.wustl.edu 37 8 113988070 113988070 + Silent SNP A A G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 8 113988070 113988070 A G SNP CSMD3 ENST00000297405 human ensembl 69_37n -1 known silent c.1338 p.H446 1.000 NULL pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP - no_errors CSMD3 HGNC ENSG00000164796 115 0 0.00 69 57 45.24 - - - DPH2 0 genome.wustl.edu 37 1 44436697 44436697 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 1 44436697 44436697 G A SNP DPH2 ENST00000255108 human ensembl 69_37n +1 known missense c.320 p.G107D 1.000 pfam_DPH1/DPH2,tigrfam_DPH1/DPH2,tigrfam_DHP2_eu pfam_DPH1/DPH2,tigrfam_DPH1/DPH2,tigrfam_DHP2_eu - no_errors DPH2 HGNC ENSG00000132768 50 0 0.00 17 11 37.93 - - - FAM20B 0 genome.wustl.edu 37 1 179019422 179019422 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 1 179019422 179019422 G A SNP FAM20B ENST00000263733 human ensembl 69_37n +1 known missense c.386 p.R129Q 1.000 NULL pfam_DUF1193 - no_errors FAM20B HGNC ENSG00000116199 122 0 0.00 59 7 10.61 - - - GREM2 0 genome.wustl.edu 37 1 240656696 240656696 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 1 240656696 240656696 G A SNP GREM2 ENST00000318160 human ensembl 69_37n -1 known missense c.80 p.A27V 0.971 pirsf_Gremlin_precursor pfam_DAN,pfam_Cys_knot,smart_Cys_knot_C,pirsf_Gremlin_precursor,pfscan_Cys_knot_C - no_errors GREM2 HGNC ENSG00000180875 26 0 0.00 14 4 22.22 - - - GTF2A1 0 genome.wustl.edu 37 14 81658982 81658982 + Missense_Mutation SNP G G T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 14 81658982 81658982 G T SNP GTF2A1 ENST00000553612 human ensembl 69_37n -1 known missense c.814 p.Q272K 1.000 pfam_TFIIA_asu/bsu pfam_TFIIA_asu/bsu,superfamily_TFIIA_b-brl,superfamily_TFIIA_a-hlx - no_errors GTF2A1 HGNC ENSG00000165417 89 0 0.00 27 10 27.03 - - - HHLA1 0 genome.wustl.edu 37 8 133101771 133101771 + Missense_Mutation SNP A A G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 8 133101771 133101771 A G SNP HHLA1 ENST00000414222 human ensembl 69_37n -1 known missense c.524 p.I175T 1.000 NULL NULL - no_errors HHLA1 HGNC ENSG00000132297 72 0 0.00 71 19 21.11 - - - HTR1F 0 genome.wustl.edu 37 3 88039993 88039993 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 3 88039993 88039993 G A SNP HTR1F ENST00000319595 human ensembl 69_37n +1 known missense c.94 p.G32R 0.001 prints_7TM_GPCR_Rhodpsn pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_5HT1F_rcpt,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt - no_errors HTR1F HGNC ENSG00000179097 70 0 0.00 39 10 20.41 - - - IL17B 0 genome.wustl.edu 37 5 148756493 148756493 + Silent SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 5 148756493 148756493 G A SNP IL17B ENST00000261796 human ensembl 69_37n -1 known silent c.117 p.A39 0.734 pfam_Interleukin-17 pfam_Interleukin-17,prints_Interleukin-17_chordata - no_errors IL17B HGNC ENSG00000127743 25 0 0.00 21 10 32.26 - - - KIAA1210 0 genome.wustl.edu 37 X 118221586 118221586 + Missense_Mutation SNP G G T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e X 118221586 118221586 G T SNP KIAA1210 ENST00000402510 human ensembl 69_37n -1 known missense c.3607 p.Q1203K 0.007 NULL NULL - no_errors KIAA1210 HGNC ENSG00000250423 56 0 0.00 23 5 17.86 - - - KIF5C 0 genome.wustl.edu 37 2 149798136 149798136 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 149798136 149798136 G A SNP KIF5C ENST00000435030 human ensembl 69_37n +1 known missense c.409 p.E137K 1.000 pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom - no_errors KIF5C HGNC ENSG00000168280 112 0 0.00 70 15 17.65 - - - MFSD3 0 genome.wustl.edu 37 8 145736012 145736012 + Missense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 8 145736012 145736012 C T SNP MFSD3 ENST00000301327 human ensembl 69_37n +1 known missense c.862 p.R288C 0.000 pfam_MFS,superfamily_MFS_dom_general_subst_transpt pfam_MFS,superfamily_MFS_dom_general_subst_transpt - no_errors MFSD3 HGNC ENSG00000167700 37 0 0.00 11 15 55.56 - - - MIR519A1 0 genome.wustl.edu 37 19 54255733 54255733 + RNA SNP G G C TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 19 54255733 54255733 G C SNP MIR519A1 ENST00000385257 human ensembl 69_37n +1 known rna NULL NULL 0.041 - - - no_errors MIR519A1 HGNC ENSG00000207992 145 0 0.00 84 11 11.58 - - - MLL2 0 genome.wustl.edu 37 12 49427620 49427622 + In_Frame_Del DEL TGG TGG - TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 TGG TGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 12 49427620 49427622 TGG - DEL MLL2 ENST00000301067 human ensembl 69_37n -1 known in_frame_del c.10868_10866 p.Q3623in_frame_del 1.000:1.000:0.994 NULL pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING - no_errors MLL2 HGNC ENSG00000167548 23 0 0.00 9 3 25.00 - - - MNT 0 genome.wustl.edu 37 17 2297393 2297393 + Frame_Shift_Del DEL C C - TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 17 2297393 2297393 C - DEL MNT ENST00000174618 human ensembl 69_37n -1 known frame_shift_del c.751 p.D251fs 1.000 pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd - no_errors MNT HGNC ENSG00000070444 21 0 0.00 6 2 25.00 - - - MUC21 0 genome.wustl.edu 37 6 30954618 30954618 + Silent SNP T T C TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 6 30954618 30954618 T C SNP MUC21 ENST00000376296 human ensembl 69_37n +1 known silent c.666 p.A222 0.000 NULL NULL - no_errors MUC21 HGNC ENSG00000204544 54 0 0.00 21 26 55.32 - - - NDUFAF1 0 genome.wustl.edu 37 15 41687079 41687079 + Missense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 15 41687079 41687079 C T SNP NDUFAF1 ENST00000260361 human ensembl 69_37n -1 known missense c.737 p.G246E 1.000 pfam_NADH-UbQ_OxRdtase-assoc_prot30,superfamily_Galactose-bd-like pfam_NADH-UbQ_OxRdtase-assoc_prot30,superfamily_Galactose-bd-like - no_errors NDUFAF1 HGNC ENSG00000137806 39 0 0.00 24 7 22.58 - - - OR4Q3 0 genome.wustl.edu 37 14 20216051 20216051 + Silent SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 14 20216051 20216051 C A SNP OR4Q3 ENST00000331723 human ensembl 69_37n +1 known silent c.465 p.I155 0.001 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR4Q3 HGNC ENSG00000182652 140 0 0.00 32 36 52.94 - - - PCDHB2 0 genome.wustl.edu 37 5 140476000 140476000 + Silent SNP G G T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 5 140476000 140476000 G T SNP PCDHB2 ENST00000194155 human ensembl 69_37n +1 known silent c.1626 p.A542 0.745 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors PCDHB2 HGNC ENSG00000112852 55 0 0.00 20 4 16.67 - - - PCLO 0 genome.wustl.edu 37 7 82544944 82544944 + Missense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 7 82544944 82544944 C T SNP PCLO ENST00000333891 human ensembl 69_37n -1 known missense c.12358 p.E4120K 1.000 NULL pfam_Znf_piccolo,pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ - no_errors PCLO HGNC ENSG00000186472 74 0 0.00 43 7 14.00 - - - PGR 0 genome.wustl.edu 37 11 100933223 100933223 + Missense_Mutation SNP C C T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 11 100933223 100933223 C T SNP PGR ENST00000325455 human ensembl 69_37n -1 known missense c.2167 p.E723K 1.000 superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt pfam_Progest_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Progest_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt - no_errors PGR HGNC ENSG00000082175 93 0 0.00 40 10 20.00 - - - PIK3CA 0 genome.wustl.edu 37 3 178921553 178921553 + Missense_Mutation SNP T T A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 3 178921553 178921553 T A SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.1035 p.N345K 1.000 superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 43 0 0.00 28 18 39.13 - - - PKD1L2 0 genome.wustl.edu 37 16 81193423 81193423 + Splice_Site SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 16 81193423 81193423 C A SNP PKD1L2 ENST00000299598 human ensembl 69_37n -1 known splice_site c.NULL NULL 0.978 - - - no_coding_region PKD1L2 HGNC ENSG00000166473 36 0 0.00 16 4 20.00 - - - PKN1 0 genome.wustl.edu 37 19 14574672 14574672 + Missense_Mutation SNP A A G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 19 14574672 14574672 A G SNP PKN1 ENST00000342216 human ensembl 69_37n +1 known missense c.1546 p.I516V 1.000 NULL pfam_Prot_kinase_cat_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_cat_dom - no_errors PKN1 HGNC ENSG00000123143 22 0 0.00 12 6 33.33 - - - PLCE1 0 genome.wustl.edu 37 10 95993811 95993811 + Missense_Mutation SNP G G C TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 10 95993811 95993811 G C SNP PLCE1 ENST00000371380 human ensembl 69_37n +1 known missense c.1956 p.R652S 1.000 pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25 pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,smart_Ras-assoc,pfscan_C2_membr_targeting,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C - no_errors PLCE1 HGNC ENSG00000138193 54 0 0.00 20 10 33.33 - - - POLR1B 0 genome.wustl.edu 37 2 113325615 113325615 + Silent SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 113325615 113325615 G A SNP POLR1B ENST00000541869 human ensembl 69_37n +1 known silent c.1932 p.L644 1.000 pfam_RNA_pol_Rpa2-specific pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpa2-specific,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_5 - no_errors POLR1B HGNC ENSG00000125630 85 0 0.00 63 16 20.25 - - - PPP2R3A 0 genome.wustl.edu 37 3 135721399 135721399 + Silent SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 3 135721399 135721399 G A SNP PPP2R3A ENST00000264977 human ensembl 69_37n +1 known silent c.1059 p.L353 0.008 NULL pfscan_EF_HAND_2 - no_errors PPP2R3A HGNC ENSG00000073711 72 0 0.00 48 27 36.00 - - - PRDM5 0 genome.wustl.edu 37 4 121698355 121698355 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 4 121698355 121698355 G A SNP PRDM5 ENST00000264808 human ensembl 69_37n -1 known missense c.1525 p.R509W 1.000 smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_SET_dom,pfscan_Znf_C2H2 - no_errors PRDM5 HGNC ENSG00000138738 101 0 0.00 68 11 13.92 - - - RALGAPA2 0 genome.wustl.edu 37 20 20553660 20553660 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 20 20553660 20553660 G A SNP RALGAPA2 ENST00000430436 human ensembl 69_37n -1 known missense c.2210 p.S737L 0.992 NULL pfam_Rap_GAP,superfamily_ARM-type_fold,pfscan_Rap_GAP - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region RALGAPA2 HGNC ENSG00000188559 43 0 0.00 32 4 10.81 - - - RANBP2 0 genome.wustl.edu 37 2 109380485 109380487 + In_Frame_Del DEL GAT GAT - TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 GAT GAT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 109380485 109380487 GAT - DEL RANBP2 ENST00000283195 human ensembl 69_37n +1 known in_frame_del c.3490_3492 p.D1167in_frame_del 1.000:1.000:0.985 NULL pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR-1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom - no_errors RANBP2 HGNC ENSG00000153201 28 0 0.00 18 2 10.00 - - - RNA5-8SP6 0 genome.wustl.edu 37 Y 10037863 10037863 + RNA DEL C C - TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e Y 10037863 10037863 C - DEL RNA5-8SP6 ENST00000515896 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors RNA5-8SP6 HGNC ENSG00000251705 18 0 0.00 10 3 21.43 - - - SAGE1 0 genome.wustl.edu 37 X 134994548 134994548 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e X 134994548 134994548 G A SNP SAGE1 ENST00000324447 human ensembl 69_37n +1 known missense c.2590 p.E864K 0.995 NULL NULL - no_errors SAGE1 HGNC ENSG00000181433 88 0 0.00 46 7 13.21 - - - SCN2A 0 genome.wustl.edu 37 2 166201270 166201270 + Missense_Mutation SNP G G T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 166201270 166201270 G T SNP SCN2A ENST00000283256 human ensembl 69_37n +1 known missense c.2768 p.W923L 1.000 pfam_Ion_trans_dom pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS - no_errors SCN2A HGNC ENSG00000136531 143 0 0.00 52 15 22.39 - - - SFSWAP 0 genome.wustl.edu 37 12 132241104 132241104 + Missense_Mutation SNP A A C TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 12 132241104 132241104 A C SNP SFSWAP ENST00000537164 human ensembl 69_37n +1 putative missense c.554 p.Q185P 0.000 NULL pfam_Surp,superfamily_Surp,smart_Surp,pfscan_Surp - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region SFSWAP HGNC ENSG00000061936 34 0 0.00 16 7 30.43 - - - SLC38A4 0 genome.wustl.edu 37 12 47163175 47163175 + Nonsense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 12 47163175 47163175 G A SNP SLC38A4 ENST00000266579 human ensembl 69_37n -1 known nonsense c.1336 p.R446* 0.997 pfam_AA_transpt_TM pfam_AA_transpt_TM - no_errors SLC38A4 HGNC ENSG00000139209 48 0 0.00 34 7 17.07 - - - SLC4A4 0 genome.wustl.edu 37 4 72205101 72205101 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 4 72205101 72205101 G A SNP SLC4A4 ENST00000425175 human ensembl 69_37n +1 known missense c.268 p.E90K 1.000 NULL pfam_HCO3_transpt_C,pfam_HCO3_transpt_cyt,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk - no_errors SLC4A4 HGNC ENSG00000080493 58 0 0.00 27 9 25.00 - - - SPATA4 0 genome.wustl.edu 37 4 177116659 177116659 + Missense_Mutation SNP C C G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 4 177116659 177116659 C G SNP SPATA4 ENST00000280191 human ensembl 69_37n -1 known missense c.55 p.D19H 0.000 NULL pfam_DUF1042,pfam_CAMSAP_CH,superfamily_CH-domain - no_errors SPATA4 HGNC ENSG00000150628 64 0 0.00 21 4 16.00 - - - TET2 0 genome.wustl.edu 37 4 106190872 106190872 + Missense_Mutation SNP G G C TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 4 106190872 106190872 G C SNP TET2 ENST00000380013 human ensembl 69_37n +1 known missense c.4150 p.D1384H 1.000 NULL NULL - no_errors TET2 HGNC ENSG00000168769 42 0 0.00 21 6 22.22 - - - TIGD7 0 genome.wustl.edu 37 16 3349850 3349850 + Silent SNP A A T TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 16 3349850 3349850 A T SNP TIGD7 ENST00000268674 human ensembl 69_37n -1 known silent c.765 p.V255 0.565 pfam_DDE_SF_endonuclease_CENPB-like pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq - no_errors TIGD7 HGNC ENSG00000140993 48 0 0.00 61 8 11.59 - - - TRIM33 0 genome.wustl.edu 37 1 114944055 114944055 + Missense_Mutation SNP A A G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 1 114944055 114944055 A G SNP TRIM33 ENST00000358465 human ensembl 69_37n -1 known missense c.2923 p.C975R 1.000 pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Bromodomain,prints_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain - no_errors TRIM33 HGNC ENSG00000197323 41 0 0.00 31 10 24.39 - - - TTPAL 0 genome.wustl.edu 37 20 43113021 43113021 + Missense_Mutation SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 20 43113021 43113021 G A SNP TTPAL ENST00000262605 human ensembl 69_37n +1 known missense c.490 p.A164T 1.000 pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran - no_errors TTPAL HGNC ENSG00000124120 64 0 0.00 48 9 15.79 - - - TWF2 0 genome.wustl.edu 37 3 52265497 52265497 + Missense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 3 52265497 52265497 C A SNP TWF2 ENST00000305533 human ensembl 69_37n -1 known missense c.341 p.G114V 0.996 pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin - no_errors TWF2 HGNC ENSG00000247596 33 0 0.00 28 7 20.00 - - - TYW1B 0 genome.wustl.edu 37 7 72286035 72286035 + RNA SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 7 72286035 72286035 G A SNP TYW1B ENST00000437915 human ensembl 69_37n -1 known rna NULL NULL 0.831 - - - no_errors TYW1B HGNC ENSG00000254184 118 0 0.00 57 11 16.18 - - - WDR66 0 genome.wustl.edu 37 12 122413496 122413496 + Missense_Mutation SNP G G C TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 12 122413496 122413496 G C SNP WDR66 ENST00000288912 human ensembl 69_37n +1 known missense c.2911 p.D971H 0.835 NULL pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom - no_errors WDR66 HGNC ENSG00000158023 87 0 0.00 49 12 19.67 - - - WDR96 0 genome.wustl.edu 37 10 105948072 105948072 + Missense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 10 105948072 105948072 C A SNP WDR96 ENST00000357060 human ensembl 69_37n -1 known missense c.1643 p.R548I 0.871 superfamily_WD40_repeat_dom superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu - no_errors WDR96 HGNC ENSG00000197748 77 0 0.00 50 19 27.54 - - - XRN1 0 genome.wustl.edu 37 3 142090130 142090130 + Nonsense_Mutation SNP C C A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 3 142090130 142090130 C A SNP XRN1 ENST00000264951 human ensembl 69_37n -1 known nonsense c.3019 p.E1007* 1.000 pirsf_5_3_exoribonuclease_1 pfam_Put_53exo,pirsf_5_3_exoribonuclease_1 - no_errors XRN1 HGNC ENSG00000114127 115 0 0.00 109 13 10.66 - - - ZC3H15 0 genome.wustl.edu 37 2 187370543 187370543 + Missense_Mutation SNP A A G TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 2 187370543 187370543 A G SNP ZC3H15 ENST00000337859 human ensembl 69_37n +1 known missense c.941 p.Y314C 0.988 NULL pfam_Znf_CCCH,smart_Znf_CCCH - no_errors ZC3H15 HGNC ENSG00000065548 122 0 0.00 44 9 16.98 - - - ZNF546 0 genome.wustl.edu 37 19 40521493 40521493 + Silent SNP G G A TCGA-AR-A255-01A-11D-A167-09 TCGA-AR-A255-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 505f1398-0bd8-4f1c-a142-651605158bf3 b9cf1b28-7656-4648-a3de-714e4a154c3e 19 40521493 40521493 G A SNP ZNF546 ENST00000347077 human ensembl 69_37n +1 known silent c.2316 p.T772 0.985 pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF546 HGNC ENSG00000187187 36 0 0.00 26 14 35.00 - - -