Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ABLIM1 0 genome.wustl.edu 37 10 116247760 116247760 + Missense_Mutation SNP T T C TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 10 116247760 116247760 T C SNP ABLIM1 ENST00000277895 human ensembl 69_37n -1 known missense c.998 p.H333R 1.000 smart_Znf_LIM pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM - no_errors ABLIM1 HGNC ENSG00000099204 77 0 0.00 36 13 26.53 - - - ADAMTS20 0 genome.wustl.edu 37 12 43944926 43944926 + Missense_Mutation SNP T T C TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 12 43944926 43944926 T C SNP ADAMTS20 ENST00000389420 human ensembl 69_37n -1 known missense c.239 p.Y80C 1.000 pfam_Peptidase_M12B_N pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B - no_errors ADAMTS20 HGNC ENSG00000173157 50 0 0.00 19 17 45.95 - - - CADM2 0 genome.wustl.edu 37 3 85932472 85932472 + Silent SNP C C T TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 3 85932472 85932472 C T SNP CADM2 ENST00000405615 human ensembl 69_37n +1 known silent c.249 p.R83 0.920 pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like - no_errors CADM2 HGNC ENSG00000175161 57 0 0.00 22 23 51.11 - - - DTNB 0 genome.wustl.edu 37 2 25678299 25678299 + Missense_Mutation SNP C C T TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 2 25678299 25678299 C T SNP DTNB ENST00000406818 human ensembl 69_37n -1 known missense c.1144 p.V382M 1.000 pirsf_Distrobrevin pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Distrobrevin,pfscan_Znf_ZZ - no_errors DTNB HGNC ENSG00000138101 35 0 0.00 9 9 50.00 - - - ENSG00000267261 0 genome.wustl.edu 37 17 40272381 40272381 + Missense_Mutation SNP G G A TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 17 40272381 40272381 G A SNP ENSG00000267261 ENST00000592248 human ensembl 69_37n -1 known missense c.449 p.T150M 0.486 smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom - no_errors CTD-2132N18.3 Clone_based_vega_gene ENSG00000267261 40 0 0.00 30 36 54.55 - - - MSH3 0 genome.wustl.edu 37 5 80024722 80024722 + Frame_Shift_Del DEL T T - TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 5 80024722 80024722 T - DEL MSH3 ENST00000265081 human ensembl 69_37n +1 known frame_shift_del c.1506 p.L503fs 0.998 pfam_DNA_mismatch_repair_MutS_connt,superfamily_DNA_mismatch_repair_MutS_connt pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mismatch_repair_MutS_connt,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mismatch_repair_MutS_connt,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C - no_errors MSH3 HGNC ENSG00000113318 83 0 0.00 12 2 14.29 - - - MYB 0 genome.wustl.edu 37 6 135507043 135507044 + Frame_Shift_Ins INS - - A TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 6 135507043 135507044 - A INS MYB ENST00000341911 human ensembl 69_37n +1 known frame_shift_ins c.26_27 p.Y10fs 1.000:0.997 NULL pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom - no_errors MYB HGNC ENSG00000118513 50 0 0.00 36 4 10.00 - - - NPIPL2 0 genome.wustl.edu 37 16 74425902 74425902 + Missense_Mutation SNP T T C TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 16 74425902 74425902 T C SNP NPIPL2 ENST00000429990 human ensembl 69_37n +1 known missense c.1256 p.I419T 0.999 NULL pfam_NPIP - no_errors NPIPL2 HGNC ENSG00000196436 20 0 0.00 10 4 28.57 - - - OR11H1 0 genome.wustl.edu 37 22 16449539 16449539 + Missense_Mutation SNP A A G TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 22 16449539 16449539 A G SNP OR11H1 ENST00000252835 human ensembl 69_37n -1 known missense c.266 p.V89A 0.234 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR11H1 HGNC ENSG00000130538 65 0 0.00 38 6 13.64 - - - OTOR 0 genome.wustl.edu 37 20 16730581 16730581 + Missense_Mutation SNP G G A TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 20 16730581 16730581 G A SNP OTOR ENST00000246081 human ensembl 69_37n +1 known missense c.289 p.V97M 0.963 pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain - no_errors OTOR HGNC ENSG00000125879 57 0 0.00 36 9 20.00 - - - P2RY10 0 genome.wustl.edu 37 X 78216689 78216689 + Silent SNP C C T TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 X 78216689 78216689 C T SNP P2RY10 ENST00000171757 human ensembl 69_37n +1 known silent c.672 p.S224 0.092 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor - no_errors P2RY10 HGNC ENSG00000078589 65 0 0.00 46 10 17.86 - - - PIEZO1 0 genome.wustl.edu 37 16 88790292 88790292 + Missense_Mutation SNP T T C TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 16 88790292 88790292 T C SNP PIEZO1 ENST00000301015 human ensembl 69_37n -1 novel missense c.4322 p.Q1441R 1.000 NULL pfam_DUF3595 - no_errors PIEZO1 HGNC ENSG00000103335 37 0 0.00 20 8 28.57 - - - SLC6A9 0 genome.wustl.edu 37 1 44476442 44476442 + Missense_Mutation SNP C C T TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 1 44476442 44476442 C T SNP SLC6A9 ENST00000360584 human ensembl 69_37n -1 known missense c.362 p.G121D 1.000 pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1 - no_errors SLC6A9 HGNC ENSG00000196517 72 0 0.00 44 19 30.16 - - - SOX15 0 genome.wustl.edu 37 17 7491739 7491739 + Missense_Mutation SNP T T G TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 17 7491739 7491739 T G SNP SOX15 ENST00000250055 human ensembl 69_37n -1 known missense c.659 p.N220T 0.009 NULL pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily - no_errors SOX15 HGNC ENSG00000129194 64 0 0.00 58 7 10.77 - - - SPTB 0 genome.wustl.edu 37 14 65266493 65266493 + Missense_Mutation SNP T T C TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 14 65266493 65266493 T C SNP SPTB ENST00000389722 human ensembl 69_37n -1 known missense c.1036 p.T346A 1.000 pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology - no_errors SPTB HGNC ENSG00000070182 22 0 0.00 13 10 40.00 - - - TMEM247 0 genome.wustl.edu 37 2 46707888 46707888 + Frame_Shift_Del DEL G G - TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 2 46707888 46707888 G - DEL TMEM247 ENST00000434431 human ensembl 69_37n +1 known frame_shift_del c.462 p.A155fs 0.083 NULL NULL - no_stop_codon:bad_bp_length_for_coding_region TMEM247 HGNC ENSG00000187600 20 0 0.00 7 3 30.00 - - - ZNF566 0 genome.wustl.edu 37 19 36940860 36940860 + Frame_Shift_Del DEL T T - TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 19 36940860 36940860 T - DEL ZNF566 ENST00000392170 human ensembl 69_37n -1 known frame_shift_del c.279 p.E94fs 0.479 NULL pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF566 HGNC ENSG00000186017 31 0 0.00 9 2 18.18 - - - ZNF574 0 genome.wustl.edu 37 19 42585066 42585066 + Missense_Mutation SNP G G A TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 19 42585066 42585066 G A SNP ZNF574 ENST00000222339 human ensembl 69_37n +1 known missense c.2578 p.D860N 1.000 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF574 HGNC ENSG00000105732 20 0 0.00 21 10 32.26 - - - ZNF777 0 genome.wustl.edu 37 7 149129243 149129243 + Missense_Mutation SNP G G A TCGA-A1-A0SB-01A-11D-A142-09 TCGA-A1-A0SB-10B-01D-A142-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx db9d40fb-bfce-4c3b-a6c2-41c5c88982f1 a3254f8e-3bbd-42fc-abea-a5f25b7648b3 7 149129243 149129243 G A SNP ZNF777 ENST00000247930 human ensembl 69_37n -1 known missense c.2120 p.S707L 1.000 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF777 HGNC ENSG00000196453 21 0 0.00 24 8 25.00 - - -